F359498

General Info

Members Datasets Scaffolds Average Seq Length
247 200 494 417

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054472261|8054476815
Length 469
Sequence DPRATLDIDARTDSEARTDSTARTDGTARTDGTARTDGTARTDGTARTDTAALLAADRAHVWHPYAPMPAVVDPVPIVGARGVRLTTADGRELVDGMSSWWAAIHGYRHPVLDAAITDQLGRMSHVMFGGLTHGPAVDLARLLVEITPGPLQHVFLADSGSVSVEVAIKMALQYQRSRGRPGKHRLLTWRGGYHGDTFGAMSVCDPDGGMHGLWRDVLPQQVFVGAPPRQFSHDYVAELAEAVERHADELAAVIVEPVVQGAGGMRFHDPRYLHVLRELCLTHDVLLVFDEIATGFGRTGELFAADHAGISPDVMCVGKALTGGYVTMAAALCSTEVARGITDGEAGVLMHGPTFMGNPLASAVALASTQLLLDQDWRGTIRSLESALTTGLAPLRAAPGVVDVRVLGAIGVVQLDHEVDMAAATGTALEAGVWLRPFRDLVYTMPPFVCDAADLARITDGVAAVVDAA

Samples

Sample ID Description Type Environment
1 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
81 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
82 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
83 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
93 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
94 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
95 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
96 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
97 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
100 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
101 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
102 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
107 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
157 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
161 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
162 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
163 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
167 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
168 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
169 2558860280 Kutzneria sp. 744 Isolate Unclassified
170 2643221621 Achromobacter sp. Root83 Isolate Unclassified
171 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
172 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
173 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
174 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
175 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
176 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
177 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
178 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
179 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
180 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
181 2858882152 Micromonospora noduli MED15 Isolate Nodule
182 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
183 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
184 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
185 2858950400 Achromobacter sp. K91 Isolate Unclassified
186 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
187 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
188 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
189 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
190 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
191 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
192 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
193 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
194 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
195 2941479691
196 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
197 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
198 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
199 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
200 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.23
Metatranscriptomes 0
Isolates 13.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.02
Nodule 2.02
Rhizoplane 2.02
Rhizosphere 70.04
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1011389 3300003792 Bacteria 2872
2 Ga0070658_10010429 3300005327 Bacteria 7451
3 Ga0070658_10180667 3300005327 Bacteria 1775
4 Ga0068869_100109352 3300005334 Bacteria 2101
5 Ga0070682_100070620 3300005337 Bacteria 2233
6 Ga0070692_10000454 3300005345 Bacteria 12482
7 Ga0070688_100032770 3300005365 Bacteria 3136
8 Ga0070659_100000002 3300005366 Bacteria 369239
9 Ga0070714_100005852 3300005435 Bacteria 9433
10 Ga0070714_100061334 3300005435 Bacteria 3229
11 Ga0070714_100229989 3300005435 Bacteria 1708
12 Ga0070713_100187759 3300005436 Bacteria 1861
13 Ga0070710_10000007 3300005437 Bacteria 215320
14 Ga0070705_100002185 3300005440 Bacteria 9929
15 Ga0070663_100062634 3300005455 Bacteria 2682
16 Ga0070681_10022758 3300005458 Bacteria 6298
17 Ga0070685_10067629 3300005466 Bacteria 2108
18 Ga0070707_100084505 3300005468 Bacteria 3067
19 Ga0070698_100044641 3300005471 Bacteria 4537
20 Ga0070679_100270583 3300005530 Bacteria 1653
21 Ga0068853_100020541 3300005539 Bacteria 5493
22 Ga0070665_100037187 3300005548 Bacteria 4897
23 Ga0068855_100004314 3300005563 Bacteria 17386
24 Ga0068855_100130433 3300005563 Bacteria 2871
25 Ga0068857_100189968 3300005577 Bacteria 1870
26 Ga0068854_100006263 3300005578 Bacteria 7561
27 Ga0068856_100037223 3300005614 Bacteria 4774
28 Ga0070702_100002668 3300005615 Bacteria 7788
29 Ga0068852_100005981 3300005616 Bacteria 8764
30 Ga0068859_100219787 3300005617 Bacteria 1987
31 Ga0068864_100182676 3300005618 Bacteria 1918
32 Ga0068864_100189659 3300005618 Bacteria 1884
33 Ga0068870_10058137 3300005840 Bacteria 2069
34 Ga0081538_10000016 3300005981 Bacteria 147022
35 Ga0081540_1002336 3300005983 Bacteria 15529
36 Ga0081539_10000988 3300005985 Bacteria 52904
37 Ga0070717_10000024 3300006028 Bacteria 158890
38 Ga0075428_100021440 3300006844 Bacteria 7152
39 Ga0075428_100158912 3300006844 Bacteria 2454
40 Ga0075431_100226458 3300006847 Bacteria 1906
41 Ga0075429_100008116 3300006880 Bacteria 9126
42 Ga0075429_100008206 3300006880 Bacteria 9079
43 Ga0075429_100196143 3300006880 Bacteria 1769
44 Ga0097620_100219783 3300006931 Bacteria 1987
45 Ga0105240_10005968 3300009093 Bacteria 18019
46 Ga0105240_10036680 3300009093 Bacteria 6305
47 Ga0105245_10036055 3300009098 Bacteria 4392
48 Ga0114129_10026954 3300009147 Bacteria 8134
49 Ga0114129_10029189 3300009147 Bacteria 7813
50 Ga0105241_10002030 3300009174 Bacteria 15312
51 Ga0105237_10007463 3300009545 Bacteria 11962
52 Ga0105237_10098048 3300009545 Bacteria 2922
53 Ga0105238_10004351 3300009551 Bacteria 14054
54 Ga0105249_10073516 3300009553 Bacteria 3162
55 Ga0105246_10143381 3300011119 Bacteria 1799
56 Ga0157370_10011259 3300013104 Bacteria 9378
57 Ga0157369_10034877 3300013105 Bacteria 5519
58 Ga0157369_10137586 3300013105 Bacteria 2585
59 Ga0157374_10013632 3300013296 Bacteria 7100
60 Ga0157378_10070508 3300013297 Bacteria 3138
61 Ga0157375_10283661 3300013308 Bacteria 1819
62 Ga0157377_10026565 3300014745 Bacteria 3099
63 Ga0213876_10029336 3300021384 Bacteria 2899
64 Ga0213875_10000035 3300021388 Bacteria 167011
65 Ga0209051_1000670 3300025303 Bacteria 38433
66 Ga0207692_10000001 3300025898 Bacteria 558345
67 Ga0207645_10019890 3300025907 Bacteria 4395
68 Ga0207705_10003881 3300025909 Bacteria 11373
69 Ga0207654_10047138 3300025911 Bacteria 2461
70 Ga0207707_10033471 3300025912 Bacteria 4498
71 Ga0207695_10004944 3300025913 Bacteria 17956
72 Ga0207671_10002858 3300025914 Bacteria 17916
73 Ga0207693_10159016 3300025915 Bacteria 1777
74 Ga0207657_10032788 3300025919 Bacteria 4688
75 Ga0207657_10084825 3300025919 Bacteria 2654
76 Ga0207652_10153065 3300025921 Bacteria 2065
77 Ga0207646_10091928 3300025922 Bacteria 2716
78 Ga0207681_10109602 3300025923 Bacteria 2006
79 Ga0207694_10001720 3300025924 Bacteria 18336
80 Ga0207664_10000008 3300025929 Bacteria 309301
81 Ga0207664_10003952 3300025929 Bacteria 9974
82 Ga0207690_10000024 3300025932 Bacteria 194416
83 Ga0207690_10038455 3300025932 Bacteria 3114
84 Ga0207706_10194243 3300025933 Bacteria 1781
85 Ga0207669_10037914 3300025937 Bacteria 2771
86 Ga0207669_10149083 3300025937 Bacteria 1636
87 Ga0207661_10009298 3300025944 Bacteria 7043
88 Ga0207661_10088500 3300025944 Bacteria 2574
89 Ga0207679_10161293 3300025945 Bacteria 1836
90 Ga0207667_10080660 3300025949 Bacteria 3371
91 Ga0207640_10125414 3300025981 Bacteria 1847
92 Ga0207708_10103005 3300026075 Bacteria 2211
93 Ga0207702_10153419 3300026078 Bacteria 2097
94 Ga0207641_10067241 3300026088 Bacteria 3069
95 Ga0207674_10017086 3300026116 Bacteria 7919
96 Ga0207674_10156819 3300026116 Bacteria 2231
97 Ga0268266_10028814 3300028379 Bacteria 4720
98 Ga0268266_10056247 3300028379 Bacteria 3384
99 Ga0265337_1004586 3300028556 Bacteria 5697
100 Ga0265326_10000004 3300028558 Bacteria 283947
101 Ga0265334_10000210 3300028573 Bacteria 33457
102 Ga0265336_10002473 3300028666 Bacteria 7586
103 Ga0265338_10002452 3300028800 Bacteria 27769
104 Ga0265324_10001135 3300029957 Bacteria 15984
105 Ga0265320_10001206 3300031240 Bacteria 19007
106 Ga0307412_10000445 3300031911 Bacteria 25038
107 Ga0395900_0141161 3300037418 Bacteria 2467
108 Ga0395900_0241024 3300037418 Bacteria 1814
109 Ga0395898_0085183 3300037466 Bacteria 3046
110 Ga0395905_0051303 3300037471 Bacteria 3864
111 Ga0436364_0511735 3300037853 Bacteria 1388
112 Ga0436364_0623424 3300037853 Bacteria 43926
113 Ga0400491_21176 3300038727 Bacteria 4236
114 Ga0400485_10707 3300038735 Bacteria 20913
115 Ga0400485_11023 3300038735 Bacteria 10769
116 Ga0400485_14784 3300038735 Bacteria 20362
117 Ga0400485_22247 3300038735 Bacteria 1468
118 Ga0400486_05863 3300038742 Bacteria 74939
119 Ga0400486_25360 3300038742 Bacteria 25475
120 Ga0400486_30669 3300038742 Bacteria 26750
121 Ga0400483_083197 3300039062 Bacteria 151799
122 Ga0400489_40976 3300039093 Bacteria 34246
123 Ga0400487_45280 3300039110 Bacteria 3431
124 Ga0400487_54412 3300039110 Bacteria 21997
125 Ga0436365_0384647 3300039437 Bacteria 3184
126 Ga0436365_0473181 3300039437 Bacteria 6004
127 Ga0436365_0876683 3300039437 Bacteria 5399
128 Ga0451793_0167831 3300041452 Bacteria 4068
129 Ga0451833_1308206 3300041491 Bacteria 1991
130 Ga0451837_0275676 3300041494 Bacteria 2439
131 Ga0466969_0028938 3300044656 Bacteria 2831
132 Ga0466963_0016232 3300044694 Bacteria 4629
133 Ga0466964_0015566 3300044706 Bacteria 2896
134 Ga0466971_0003248 3300044719 Bacteria 6938
135 Ga0466968_0007679 3300044735 Bacteria 4106
136 Ga0466970_0007394 3300044765 Bacteria 5503
137 Ga0466970_0094289 3300044765 Bacteria 1626
138 Ga0466959_0003095 3300045049 Bacteria 10782
139 Ga0466958_0000033 3300045836 Bacteria 38883
140 Ga0466967_0033525 3300045976 Bacteria 4348
141 Ga0466967_0036904 3300045976 Bacteria 4177
142 Ga0466967_0091512 3300045976 Bacteria 2765
143 Ga0466967_0199591 3300045976 Bacteria 1894
144 Ga0466967_0309391 3300045976 Bacteria 1522
145 Ga0495664_0000007 3300046477 Bacteria 386710
146 Ga0495618_0000046 3300046514 Bacteria 93942
147 Ga0495652_0001294 3300046529 Bacteria 27955
148 Ga0495652_0025661 3300046529 Bacteria 5210
149 Ga0495645_0000152 3300046543 Bacteria 47567
150 Ga0495645_0000641 3300046543 Bacteria 24121
151 Ga0496100_0001648 3300048903 Bacteria 11058
152 Ga0496102_0000002 3300048905 Bacteria 814588
153 Ga0496103_0000017 3300048906 Bacteria 244768
154 Ga0496112_0272301 3300048915 Bacteria 1641
155 Ga0496116_0003950 3300048919 Bacteria 14413
156 Ga0496116_0032354 3300048919 Bacteria 3729
157 Ga0496117_0092111 3300048920 Bacteria 1948
158 Ga0496118_0011464 3300048921 Bacteria 8647
159 Ga0496118_0031775 3300048921 Bacteria 4367
160 Ga0496119_0011510 3300048922 Bacteria 7313
161 Ga0496120_0005294 3300048923 Bacteria 10347
162 Ga0496121_0000145 3300048924 Bacteria 156655
163 Ga0496122_0000029 3300048925 Bacteria 336396
164 Ga0496123_0000216 3300048926 Bacteria 117098
165 Ga0496123_0122364 3300048926 Bacteria 1460
166 Ga0496125_0001102 3300048928 Bacteria 41526
167 Ga0496125_0024642 3300048928 Bacteria 5527
168 Ga0496126_0026095 3300048929 Bacteria 5609
169 Ga0501031_0006471 3300049568 Bacteria 7638
170 Ga0501034_0012771 3300049571 Bacteria 8661
171 Ga0501036_0015472 3300049572 Bacteria 6373
172 Ga0501036_0044312 3300049572 Bacteria 3768
173 Ga0501037_0006936 3300049573 Bacteria 8274
174 Ga0501037_0034312 3300049573 Bacteria 3744
175 Ga0501038_0019581 3300049574 Bacteria 6098
176 Ga0501038_0023964 3300049574 Bacteria 5450
177 Ga0501039_0065197 3300049575 Bacteria 2825
178 Ga0501040_0020041 3300049576 Bacteria 4454
179 Ga0501041_0004559 3300049577 Bacteria 8039
180 Ga0501043_0005720 3300049579 Bacteria 10015
181 Ga0501046_0167838 3300049580 Bacteria 1648
182 Ga0501047_0013590 3300049581 Bacteria 7721
183 Ga0501047_0172791 3300049581 Bacteria 2029
184 Ga0501048_0006882 3300049582 Bacteria 8641
185 Ga0501068_0046170 3300049584 Bacteria 2626
186 Ga0501071_0111674 3300049587 Bacteria 2020
187 Ga0501072_0060048 3300049588 Bacteria 2998
188 Ga0501073_0061145 3300049589 Bacteria 2629
189 Ga0501074_0001033 3300049590 Bacteria 18071
190 Ga0501074_0099866 3300049590 Bacteria 2077
191 Ga0501075_0004982 3300049591 Bacteria 9059
192 Ga0501076_0092979 3300049592 Bacteria 2426
193 Ga0501077_0013552 3300049593 Bacteria 5113
194 Ga0501079_0151621 3300049741 Bacteria 1807
195 Ga0501080_0082769 3300049742 Bacteria 2981
196 Ga0501081_0044043 3300049743 Bacteria 3062
197 Ga0501035_0053582 3300049822 Bacteria 3606
198 Ga0501044_0059301 3300049823 Bacteria 3921
199 Ga0501044_0109047 3300049823 Bacteria 2778
200 Ga0501045_0018853 3300049824 Bacteria 4912
201 nmdc:mga05p37_174869_c1 3300050507 Bacteria 2616
202 nmdc:mga09592_154177_c1 3300050508 Bacteria 1983
203 nmdc:mga09592_7391_c1 3300050508 Bacteria 6354
204 nmdc:mga0qj67_1440_c1 3300050509 Bacteria 16662
205 nmdc:mga06r32_151431_c1 3300050510 Bacteria 2298
206 Ga0495601_0005414 3300053077 Bacteria 7432
207 Ga0495612_0000076 3300053078 Bacteria 44649
208 Ga0500593_005031 3300053117 Bacteria 5170
209 Ga0500618_014878 3300053125 Bacteria 1977
210 Ga0500634_0042129 3300053161 Bacteria 2477
211 Ga0501084_0032696 3300054114 Bacteria 4352
212 Ga0501082_0013520 3300060353 Bacteria 7013
213 Ga0530510_0075228 3300061734 Bacteria 2452
214 8054476815 8054472261 Bacteria 7464355
215 2558912067 2558860112 Bacteria 9931328
216 2559429887 2558860280 Bacteria 11429938
217 2644119652 2643221621 Bacteria 6212786
218 2645721911 2643221961 Bacteria 3919167
219 2645724143 2643221962 Bacteria 3874254
220 2753070951 2751185734 Bacteria 8863695
221 2772643615 2772190715 Bacteria 6959372
222 2791913467 2791354901 Bacteria 8322202
223 2855675217 2855670206 Bacteria 7120389
224 2855681995 2855676851 Bacteria 7063653
225 2857292907 2857288857 Bacteria 7189066
226 2857541150 2857537821 Bacteria 5248181
227 2858850048 2858848962 Bacteria 6963058
228 2858883439 2858882152 Bacteria 7230291
229 2858893822 2858888857 Bacteria 7060307
230 2858899380 2858895516 Bacteria 7378898
231 2858907803 2858902515 Bacteria 7086037
232 2858953361 2858950400 Bacteria 6783797
233 2869051804 2869048445 Bacteria 6875584
234 2869066657 2869061728 Bacteria 7112407
235 2869074112 2869068681 Bacteria 7205615
236 2870726468 2870721527 Bacteria 9689237
237 2880492078 2880489317 Bacteria 7096270
238 2891330916 2891326441 Bacteria 6439512
239 2895883471 2895880812 Bacteria 11255272
240 2929222113 2929219909 Bacteria 6984360
241 2929228771 2929226422 Bacteria 7248583
242 2941483630
243 2996227937 2996221748 Bacteria 6799777
244 8003860386 8003856774 Bacteria 7675274
245 8054707119 8054704163 Bacteria 7247792
246 8054731794 8054727385 Bacteria 7558670
247 8054738350 8054734606 Bacteria 6947278
248 Ga0055540_1011389
249 Ga0070658_10010429
250 Ga0070658_10180667
251 Ga0068869_100109352
252 Ga0070682_100070620
253 Ga0070692_10000454
254 Ga0070688_100032770
255 Ga0070659_100000002
256 Ga0070714_100005852
257 Ga0070714_100061334
258 Ga0070714_100229989
259 Ga0070713_100187759
260 Ga0070710_10000007
261 Ga0070705_100002185
262 Ga0070663_100062634
263 Ga0070681_10022758
264 Ga0070685_10067629
265 Ga0070707_100084505
266 Ga0070698_100044641
267 Ga0070679_100270583
268 Ga0068853_100020541
269 Ga0070665_100037187
270 Ga0068855_100004314
271 Ga0068855_100130433
272 Ga0068857_100189968
273 Ga0068854_100006263
274 Ga0068856_100037223
275 Ga0070702_100002668
276 Ga0068852_100005981
277 Ga0068859_100219787
278 Ga0068864_100182676
279 Ga0068864_100189659
280 Ga0068870_10058137
281 Ga0081538_10000016
282 Ga0081540_1002336
283 Ga0081539_10000988
284 Ga0070717_10000024
285 Ga0075428_100021440
286 Ga0075428_100158912
287 Ga0075431_100226458
288 Ga0075429_100008116
289 Ga0075429_100008206
290 Ga0075429_100196143
291 Ga0097620_100219783
292 Ga0105240_10005968
293 Ga0105240_10036680
294 Ga0105245_10036055
295 Ga0114129_10026954
296 Ga0114129_10029189
297 Ga0105241_10002030
298 Ga0105237_10007463
299 Ga0105237_10098048
300 Ga0105238_10004351
301 Ga0105249_10073516
302 Ga0105246_10143381
303 Ga0157370_10011259
304 Ga0157369_10034877
305 Ga0157369_10137586
306 Ga0157374_10013632
307 Ga0157378_10070508
308 Ga0157375_10283661
309 Ga0157377_10026565
310 Ga0213876_10029336
311 Ga0213875_10000035
312 Ga0209051_1000670
313 Ga0207692_10000001
314 Ga0207645_10019890
315 Ga0207705_10003881
316 Ga0207654_10047138
317 Ga0207707_10033471
318 Ga0207695_10004944
319 Ga0207671_10002858
320 Ga0207693_10159016
321 Ga0207657_10032788
322 Ga0207657_10084825
323 Ga0207652_10153065
324 Ga0207646_10091928
325 Ga0207681_10109602
326 Ga0207694_10001720
327 Ga0207664_10000008
328 Ga0207664_10003952
329 Ga0207690_10000024
330 Ga0207690_10038455
331 Ga0207706_10194243
332 Ga0207669_10037914
333 Ga0207669_10149083
334 Ga0207661_10009298
335 Ga0207661_10088500
336 Ga0207679_10161293
337 Ga0207667_10080660
338 Ga0207640_10125414
339 Ga0207708_10103005
340 Ga0207702_10153419
341 Ga0207641_10067241
342 Ga0207674_10017086
343 Ga0207674_10156819
344 Ga0268266_10028814
345 Ga0268266_10056247
346 Ga0265337_1004586
347 Ga0265326_10000004
348 Ga0265334_10000210
349 Ga0265336_10002473
350 Ga0265338_10002452
351 Ga0265324_10001135
352 Ga0265320_10001206
353 Ga0307412_10000445
354 Ga0395900_0141161
355 Ga0395900_0241024
356 Ga0395898_0085183
357 Ga0395905_0051303
358 Ga0436364_0511735
359 Ga0436364_0623424
360 Ga0400491_21176
361 Ga0400485_10707
362 Ga0400485_11023
363 Ga0400485_14784
364 Ga0400485_22247
365 Ga0400486_05863
366 Ga0400486_25360
367 Ga0400486_30669
368 Ga0400483_083197
369 Ga0400489_40976
370 Ga0400487_45280
371 Ga0400487_54412
372 Ga0436365_0384647
373 Ga0436365_0473181
374 Ga0436365_0876683
375 Ga0451793_0167831
376 Ga0451833_1308206
377 Ga0451837_0275676
378 Ga0466969_0028938
379 Ga0466963_0016232
380 Ga0466964_0015566
381 Ga0466971_0003248
382 Ga0466968_0007679
383 Ga0466970_0007394
384 Ga0466970_0094289
385 Ga0466959_0003095
386 Ga0466958_0000033
387 Ga0466967_0033525
388 Ga0466967_0036904
389 Ga0466967_0091512
390 Ga0466967_0199591
391 Ga0466967_0309391
392 Ga0495664_0000007
393 Ga0495618_0000046
394 Ga0495652_0001294
395 Ga0495652_0025661
396 Ga0495645_0000152
397 Ga0495645_0000641
398 Ga0496100_0001648
399 Ga0496102_0000002
400 Ga0496103_0000017
401 Ga0496112_0272301
402 Ga0496116_0003950
403 Ga0496116_0032354
404 Ga0496117_0092111
405 Ga0496118_0011464
406 Ga0496118_0031775
407 Ga0496119_0011510
408 Ga0496120_0005294
409 Ga0496121_0000145
410 Ga0496122_0000029
411 Ga0496123_0000216
412 Ga0496123_0122364
413 Ga0496125_0001102
414 Ga0496125_0024642
415 Ga0496126_0026095
416 Ga0501031_0006471
417 Ga0501034_0012771
418 Ga0501036_0015472
419 Ga0501036_0044312
420 Ga0501037_0006936
421 Ga0501037_0034312
422 Ga0501038_0019581
423 Ga0501038_0023964
424 Ga0501039_0065197
425 Ga0501040_0020041
426 Ga0501041_0004559
427 Ga0501043_0005720
428 Ga0501046_0167838
429 Ga0501047_0013590
430 Ga0501047_0172791
431 Ga0501048_0006882
432 Ga0501068_0046170
433 Ga0501071_0111674
434 Ga0501072_0060048
435 Ga0501073_0061145
436 Ga0501074_0001033
437 Ga0501074_0099866
438 Ga0501075_0004982
439 Ga0501076_0092979
440 Ga0501077_0013552
441 Ga0501079_0151621
442 Ga0501080_0082769
443 Ga0501081_0044043
444 Ga0501035_0053582
445 Ga0501044_0059301
446 Ga0501044_0109047
447 Ga0501045_0018853
448 nmdc:mga05p37_174869_c1
449 nmdc:mga09592_154177_c1
450 nmdc:mga09592_7391_c1
451 nmdc:mga0qj67_1440_c1
452 nmdc:mga06r32_151431_c1
453 Ga0495601_0005414
454 Ga0495612_0000076
455 Ga0500593_005031
456 Ga0500618_014878
457 Ga0500634_0042129
458 Ga0501084_0032696
459 Ga0501082_0013520
460 Ga0530510_0075228
461 8054476815
462 2558912067
463 2559429887
464 2644119652
465 2645721911
466 2645724143
467 2753070951
468 2772643615
469 2791913467
470 2855675217
471 2855681995
472 2857292907
473 2857541150
474 2858850048
475 2858883439
476 2858893822
477 2858899380
478 2858907803
479 2858953361
480 2869051804
481 2869066657
482 2869074112
483 2870726468
484 2880492078
485 2891330916
486 2895883471
487 2929222113
488 2929228771
489 2941483630
490 2996227937
491 8003860386
492 8054707119
493 8054731794
494 8054738350

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

67

466

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cxq-assembly1.cif.gz_B mycobaterium tuberculosis transaminase bioa complexed with substrate kapa 0.9843 4 427
3tft-assembly1.cif.gz_A crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, pre-reaction complex with a 3,6-dihydropyrid-2-one heterocycle inhibitor 0.9839 4 427
4cxq-assembly1.cif.gz_A mycobaterium tuberculosis transaminase bioa complexed with substrate kapa 0.9836 4 429
3tfu-assembly1.cif.gz_B crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, post-reaction complex with a 3,6-dihydropyrid-2-one heterocycle inhibitor 0.9833 3 427
6ge8-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis bioa 0.9828 3 427
ID Description Score Start End Superfamily
af_P9WQ81_343_427_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 1.001 340 422 3.90.1150.10
af_P9WQ81_343_427_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9662 340 422 3.90.1150.10
4w1vB01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9634 3 427 3.90.1150.10
1mgvA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9607 69 335 3.40.640.10
1qj5B01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9587 335 427 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A654TVG3-F1-model_v4 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioA (EC 2.6.1.62) 0.995 316 427 GO:0004015
GO:0009102
GO:0030170
AF-A0A3B8ZSZ2-F1-model_v4 deleted 0.9813 210 427
AF-A0A837Q7Q4-F1-model_v4 deleted 0.9786 232 427
AF-A0A383BF02-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.9707 259 426 GO:0004015
GO:0009102
GO:0030170
AF-A0A382YU12-F1-model_v4 7,8-diamino-pelargonic acid aminotransferase 0.9703 191 430 GO:0004015
GO:0009102
GO:0030170

Map