F359345

General Info

Members Datasets Scaffolds Average Seq Length
247 144 494 441

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0013099|Ga0496108_0013099_3207_4721
Length 498
Sequence MGTAVESGPGRRTAGGRATTIGARLSRHARASIGTSAEEIQEWDRSQDASIPTMVAGGKFRSMLSDPIAALATPPGRSALAVVRLSGAGAFEVAARVIAGFRIRPPRTATLATFRDASGEAIDRGLYTVFPAPSSYTGEDVVELSCHGGLLAPTRLLGALHAAGARPAAPGEFTRRAVMNGKLDLVQAEAVGDLIDATAPAQARAALRQLDGSLSRRLADLRLSLIEAEGLLAYDIDFPGEDDGPVPPSRIAAQLEAVAARIERLLESAPAAERVREGALLVLAGRPNTGKSSLFNALLGDQRTLVTEIPGTTRDAVEAHTEFIGWPVRLVDTAGLWDAPDPIDRLGVDVSRRYLASADLVLLCVETGRTPGPDESAVAAARPTLLVRTKSDLSPAAPGGGVPVSAISGAGLGEVRRAAAEQVFGDRLILADLEPALGRARQRTALLVSALEQFRGAGDAVLVAHHVREATGALDELVGVVDIEEVLDSVFAGFCVGK

Samples

Sample ID Description Type Environment
1 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
100 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
119 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
142 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.31
Rhizosphere 90.28
Stem 0
Stem Tuber 0
Unclassified 10.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496108_0013099 3300048911 Bacteria 6760
2 rootL2_10279670 3300003322 Bacteria 5090
3 Ga0070658_10065757 3300005327 Bacteria 2960
4 Ga0070658_10070838 3300005327 Unclassified 2855
5 Ga0070658_10105268 3300005327 Bacteria 2334
6 Ga0070658_10192838 3300005327 Bacteria 1718
7 Ga0070683_100023870 3300005329 Bacteria 5474
8 Ga0070670_100007378 3300005331 Bacteria 9338
9 Ga0070660_100116876 3300005339 Bacteria 2127
10 Ga0070660_100154517 3300005339 Bacteria 1847
11 Ga0070661_100075303 3300005344 Bacteria 2486
12 Ga0070668_100003158 3300005347 Bacteria 12137
13 Ga0070671_100051839 3300005355 Unclassified 3412
14 Ga0070674_100037616 3300005356 Unclassified 3256
15 Ga0070673_100075208 3300005364 Unclassified 2724
16 Ga0070659_100074240 3300005366 Bacteria 2709
17 Ga0070659_100123182 3300005366 Bacteria 2102
18 Ga0070667_100017374 3300005367 Bacteria 5962
19 Ga0070714_100054112 3300005435 Bacteria 3428
20 Ga0070701_10031692 3300005438 Bacteria 2625
21 Ga0070711_100151079 3300005439 Unclassified 1751
22 Ga0070705_100025202 3300005440 Unclassified 3222
23 Ga0070708_100003871 3300005445 Bacteria 11744
24 Ga0070708_100019178 3300005445 Bacteria 5742
25 Ga0070663_100146439 3300005455 Bacteria 1807
26 Ga0070681_10093016 3300005458 Bacteria 2964
27 Ga0070706_100000287 3300005467 Bacteria 61228
28 Ga0070707_100008720 3300005468 Bacteria 9402
29 Ga0070707_100017267 3300005468 Bacteria 6783
30 Ga0070698_100012378 3300005471 Bacteria 9034
31 Ga0070698_100028461 3300005471 Bacteria 5804
32 Ga0070698_100032203 3300005471 Bacteria 5431
33 Ga0070698_100142630 3300005471 Unclassified 2346
34 Ga0070699_100000063 3300005518 Bacteria 100440
35 Ga0070699_100006742 3300005518 Bacteria 9987
36 Ga0070699_100010169 3300005518 Bacteria 8143
37 Ga0070699_100043190 3300005518 Bacteria 3902
38 Ga0070699_100079823 3300005518 Bacteria 2851
39 Ga0070679_100086684 3300005530 Bacteria 3118
40 Ga0070679_100121073 3300005530 Bacteria 2601
41 Ga0070684_100081030 3300005535 Bacteria 2872
42 Ga0070697_100083413 3300005536 Bacteria 2636
43 Ga0070697_100098111 3300005536 Bacteria 2432
44 Ga0070672_100007284 3300005543 Bacteria 7497
45 Ga0070672_100046206 3300005543 Bacteria 3373
46 Ga0070696_100010191 3300005546 Bacteria 6289
47 Ga0070693_100094108 3300005547 Unclassified 1812
48 Ga0070665_100009394 3300005548 Bacteria 9897
49 Ga0070665_100116702 3300005548 Bacteria 2672
50 Ga0070704_100000770 3300005549 Bacteria 15797
51 Ga0070664_100010461 3300005564 Bacteria 7521
52 Ga0070664_100018009 3300005564 Bacteria 5799
53 Ga0070664_100321683 3300005564 Unclassified 1402
54 Ga0068857_100007979 3300005577 Bacteria 9138
55 Ga0068864_100028356 3300005618 Bacteria 4731
56 Ga0068864_100047202 3300005618 Bacteria 3698
57 Ga0068864_100075879 3300005618 Bacteria 2936
58 Ga0068864_100193938 3300005618 Bacteria 1863
59 Ga0068870_10000924 3300005840 Bacteria 11507
60 Ga0068863_100007578 3300005841 Bacteria 10615
61 Ga0068858_100092949 3300005842 Bacteria 2808
62 Ga0068862_100002663 3300005844 Bacteria 15712
63 Ga0075428_100010124 3300006844 Bacteria 10476
64 Ga0075428_100014353 3300006844 Bacteria 8808
65 Ga0075428_100045058 3300006844 Bacteria 4847
66 Ga0075430_100061758 3300006846 Bacteria 3148
67 Ga0075431_100037694 3300006847 Bacteria 4978
68 Ga0075431_100038367 3300006847 Bacteria 4933
69 Ga0075431_100168226 3300006847 Unclassified 2253
70 Ga0075431_100302449 3300006847 Bacteria 1616
71 Ga0075433_10200889 3300006852 Bacteria 1772
72 Ga0075429_100139566 3300006880 Bacteria 2122
73 Ga0075436_100078684 3300006914 Bacteria 2284
74 Ga0075435_100024725 3300007076 Bacteria 4666
75 Ga0075435_100176224 3300007076 Bacteria 1806
76 Ga0105240_10038991 3300009093 Bacteria 6088
77 Ga0111539_10165028 3300009094 Bacteria 2590
78 Ga0114129_10008671 3300009147 Bacteria 14491
79 Ga0114129_10023433 3300009147 Bacteria 8752
80 Ga0114129_10166289 3300009147 Bacteria 3010
81 Ga0105241_10000042 3300009174 Bacteria 105578
82 Ga0105237_10070178 3300009545 Bacteria 3499
83 Ga0105239_10017839 3300010375 Bacteria 7849
84 Ga0157370_10058472 3300013104 Bacteria 3664
85 Ga0157374_10091664 3300013296 Unclassified 2898
86 Ga0163162_10001162 3300013306 Bacteria 24548
87 Ga0157375_10067167 3300013308 Bacteria 3582
88 Ga0163163_10097556 3300014325 Bacteria 2959
89 Ga0157379_10054163 3300014968 Bacteria 3585
90 Ga0157379_10060692 3300014968 Bacteria 3381
91 Ga0207643_10000780 3300025908 Bacteria 19398
92 Ga0207684_10033813 3300025910 Bacteria 4348
93 Ga0207654_10000038 3300025911 Bacteria 108576
94 Ga0207695_10137166 3300025913 Unclassified 2399
95 Ga0207663_10024190 3300025916 Bacteria 3496
96 Ga0207660_10054792 3300025917 Bacteria 2847
97 Ga0207657_10000818 3300025919 Bacteria 32858
98 Ga0207657_10031000 3300025919 Unclassified 4847
99 Ga0207657_10093518 3300025919 Bacteria 2504
100 Ga0207649_10077769 3300025920 Bacteria 2139
101 Ga0207652_10124180 3300025921 Bacteria 2299
102 Ga0207652_10165516 3300025921 Bacteria 1983
103 Ga0207646_10016981 3300025922 Bacteria 6821
104 Ga0207646_10041682 3300025922 Bacteria 4126
105 Ga0207646_10188512 3300025922 Bacteria 1863
106 Ga0207646_10204408 3300025922 Bacteria 1784
107 Ga0207681_10006976 3300025923 Bacteria 6932
108 Ga0207694_10074038 3300025924 Unclassified 2665
109 Ga0207650_10011091 3300025925 Bacteria 6197
110 Ga0207664_10094027 3300025929 Bacteria 2463
111 Ga0207706_10036605 3300025933 Unclassified 4359
112 Ga0207669_10024159 3300025937 Unclassified 3262
113 Ga0207691_10000797 3300025940 Bacteria 31329
114 Ga0207691_10031608 3300025940 Bacteria 4939
115 Ga0207661_10071662 3300025944 Bacteria 2832
116 Ga0207679_10010832 3300025945 Bacteria 5877
117 Ga0207679_10066117 3300025945 Bacteria 2708
118 Ga0207667_10006168 3300025949 Bacteria 14555
119 Ga0207651_10058300 3300025960 Bacteria 2668
120 Ga0207712_10000958 3300025961 Bacteria 20793
121 Ga0207703_10087589 3300026035 Bacteria 2611
122 Ga0207678_10050133 3300026067 Bacteria 3607
123 Ga0207678_10163899 3300026067 Bacteria 1898
124 Ga0207641_10010561 3300026088 Bacteria 7577
125 Ga0207648_10142156 3300026089 Bacteria 2115
126 Ga0207676_10059113 3300026095 Bacteria 3026
127 Ga0207676_10063717 3300026095 Bacteria 2929
128 Ga0207676_10175273 3300026095 Bacteria 1872
129 Ga0207676_10216428 3300026095 Bacteria 1703
130 Ga0207674_10019757 3300026116 Bacteria 7291
131 Ga0268265_10002817 3300028380 Bacteria 12788
132 Ga0307405_10053464 3300031731 Unclassified 2516
133 Ga0307405_10077681 3300031731 Bacteria 2158
134 Ga0307413_10007647 3300031824 Bacteria 5040
135 Ga0307413_10124135 3300031824 Bacteria 1754
136 Ga0307410_10000760 3300031852 Bacteria 13537
137 Ga0307410_10002647 3300031852 Bacteria 8732
138 Ga0307410_10017176 3300031852 Bacteria 4337
139 Ga0307410_10017277 3300031852 Unclassified 4327
140 Ga0307406_10007354 3300031901 Bacteria 6104
141 Ga0307406_10008497 3300031901 Bacteria 5733
142 Ga0307406_10031453 3300031901 Unclassified 3232
143 Ga0307406_10131745 3300031901 Bacteria 1756
144 Ga0307407_10000646 3300031903 Bacteria 11163
145 Ga0307407_10003430 3300031903 Bacteria 6498
146 Ga0307407_10087097 3300031903 Unclassified 1904
147 Ga0307409_100000637 3300031995 Bacteria 15463
148 Ga0307409_100045786 3300031995 Bacteria 3306
149 Ga0307409_100084436 3300031995 Unclassified 2578
150 Ga0307416_100000294 3300032002 Bacteria 26100
151 Ga0307416_100003299 3300032002 Bacteria 9439
152 Ga0307416_100008585 3300032002 Bacteria 6607
153 Ga0307416_100031932 3300032002 Bacteria 3972
154 Ga0307416_100156220 3300032002 Bacteria 2100
155 Ga0307416_100222428 3300032002 Bacteria 1812
156 Ga0307414_10012998 3300032004 Bacteria 4943
157 Ga0307414_10052371 3300032004 Bacteria 2840
158 Ga0307414_10103570 3300032004 Bacteria 2148
159 Ga0307411_10009328 3300032005 Bacteria 5153
160 Ga0307411_10038284 3300032005 Bacteria 3024
161 Ga0307415_100000344 3300032126 Bacteria 19992
162 Ga0307415_100002286 3300032126 Bacteria 9499
163 Ga0373931_0006439 3300035691 Bacteria 5488
164 Ga0373931_0014671 3300035691 Bacteria 3835
165 Ga0439433_0008557 3300041999 Bacteria 2221
166 Ga0439462_0009781 3300042015 Bacteria 2425
167 Ga0451577_0280353 3300042876 Bacteria 1510
168 Ga0466966_0005438 3300044684 Bacteria 8371
169 Ga0466959_0003893 3300045049 Bacteria 9907
170 Ga0495667_0034725 3300046559 Bacteria 3371
171 Ga0496100_0176731 3300048903 Unclassified 1542
172 Ga0496102_0003097 3300048905 Bacteria 14094
173 Ga0496102_0056109 3300048905 Bacteria 3593
174 Ga0496102_0071659 3300048905 Bacteria 3182
175 Ga0496102_0137255 3300048905 Bacteria 2292
176 Ga0496104_0010714 3300048907 Bacteria 8199
177 Ga0496108_0000686 3300048911 Bacteria 26195
178 Ga0496108_0026711 3300048911 Bacteria 4764
179 Ga0496109_0001555 3300048912 Bacteria 19101
180 Ga0496109_0004485 3300048912 Bacteria 11667
181 Ga0496109_0017160 3300048912 Bacteria 6339
182 Ga0496109_0024293 3300048912 Bacteria 5386
183 Ga0496109_0100145 3300048912 Bacteria 2688
184 Ga0496110_0002599 3300048913 Bacteria 13585
185 Ga0496110_0006751 3300048913 Bacteria 9129
186 Ga0496110_0032178 3300048913 Bacteria 4528
187 Ga0496110_0106432 3300048913 Bacteria 2517
188 Ga0496112_0006322 3300048915 Bacteria 10402
189 Ga0496112_0014368 3300048915 Bacteria 7340
190 Ga0496112_0022020 3300048915 Bacteria 6067
191 Ga0496113_0008081 3300048916 Bacteria 6829
192 Ga0496113_0012933 3300048916 Bacteria 5629
193 Ga0501031_0124935 3300049568 Bacteria 1681
194 Ga0501034_0000907 3300049571 Bacteria 43209
195 Ga0501041_0053880 3300049577 Bacteria 2454
196 Ga0501046_0084259 3300049580 Bacteria 2452
197 Ga0501048_0070327 3300049582 Bacteria 2472
198 Ga0501067_0000356 3300049583 Bacteria 24958
199 Ga0501067_0085971 3300049583 Bacteria 1745
200 Ga0501068_0000609 3300049584 Bacteria 18232
201 Ga0501069_0001483 3300049585 Bacteria 11567
202 Ga0501069_0002297 3300049585 Bacteria 9659
203 Ga0501069_0002476 3300049585 Bacteria 9428
204 Ga0501070_0000532 3300049586 Bacteria 34981
205 Ga0501070_0057064 3300049586 Bacteria 3236
206 Ga0501070_0193533 3300049586 Bacteria 1671
207 Ga0501071_0000243 3300049587 Bacteria 25198
208 Ga0501071_0157704 3300049587 Bacteria 1695
209 Ga0501072_0000203 3300049588 Bacteria 43333
210 Ga0501073_0003230 3300049589 Bacteria 12231
211 Ga0501073_0015403 3300049589 Bacteria 5546
212 Ga0501074_0000554 3300049590 Bacteria 23059
213 Ga0501076_0192258 3300049592 Bacteria 1666
214 Ga0501077_0037959 3300049593 Unclassified 3067
215 Ga0501243_007454 3300049675 Unclassified 1672
216 Ga0501079_0025628 3300049741 Bacteria 4520
217 Ga0501079_0048311 3300049741 Bacteria 3284
218 Ga0501080_0000191 3300049742 Bacteria 44841
219 Ga0501080_0020761 3300049742 Bacteria 6082
220 Ga0501080_0029126 3300049742 Bacteria 5139
221 Ga0501080_0037060 3300049742 Bacteria 4553
222 Ga0501080_0251399 3300049742 Bacteria 1612
223 Ga0501081_0090295 3300049743 Bacteria 2153
224 Ga0501083_0012123 3300049744 Bacteria 6035
225 Ga0501045_0024038 3300049824 Bacteria 4374
226 Ga0501045_0046734 3300049824 Bacteria 3152
227 nmdc:mga05p37_13456_c1 3300050507 Bacteria 9803
228 nmdc:mga05p37_76366_c1 3300050507 Bacteria 4125
229 nmdc:mga09592_27146_c1 3300050508 Bacteria 4750
230 nmdc:mga0qj67_87310_c1 3300050509 Unclassified 2503
231 nmdc:mga06r32_291965_c1 3300050510 Unclassified 1617
232 nmdc:mga06r32_82752_c1 3300050510 Bacteria 3127
233 nmdc:mga0n895_4710_c1 3300050512 Bacteria 11263
234 nmdc:mga0rr50_151929_c1 3300050513 Bacteria 1872
235 nmdc:mga0a205_144003_c1 3300050515 Bacteria 2283
236 Ga0501084_0001203 3300054114 Bacteria 20288
237 Ga0501084_0007551 3300054114 Bacteria 8967
238 Ga0501084_0019534 3300054114 Bacteria 5645
239 Ga0501084_0045695 3300054114 Bacteria 3666
240 Ga0590071_000123 3300059421 Bacteria 21754
241 Ga0590071_002026 3300059421 Bacteria 5177
242 Ga0590075_000404 3300059424 Bacteria 11808
243 Ga0590077_002141 3300059426 Bacteria 4317
244 Ga0590077_005448 3300059426 Bacteria 2609
245 Ga0501082_0000999 3300060353 Bacteria 24982
246 Ga0501082_0003204 3300060353 Bacteria 14263
247 Ga0501082_0033347 3300060353 Bacteria 4443
248 Ga0496108_0013099
249 rootL2_10279670
250 Ga0070658_10065757
251 Ga0070658_10070838
252 Ga0070658_10105268
253 Ga0070658_10192838
254 Ga0070683_100023870
255 Ga0070670_100007378
256 Ga0070660_100116876
257 Ga0070660_100154517
258 Ga0070661_100075303
259 Ga0070668_100003158
260 Ga0070671_100051839
261 Ga0070674_100037616
262 Ga0070673_100075208
263 Ga0070659_100074240
264 Ga0070659_100123182
265 Ga0070667_100017374
266 Ga0070714_100054112
267 Ga0070701_10031692
268 Ga0070711_100151079
269 Ga0070705_100025202
270 Ga0070708_100003871
271 Ga0070708_100019178
272 Ga0070663_100146439
273 Ga0070681_10093016
274 Ga0070706_100000287
275 Ga0070707_100008720
276 Ga0070707_100017267
277 Ga0070698_100012378
278 Ga0070698_100028461
279 Ga0070698_100032203
280 Ga0070698_100142630
281 Ga0070699_100000063
282 Ga0070699_100006742
283 Ga0070699_100010169
284 Ga0070699_100043190
285 Ga0070699_100079823
286 Ga0070679_100086684
287 Ga0070679_100121073
288 Ga0070684_100081030
289 Ga0070697_100083413
290 Ga0070697_100098111
291 Ga0070672_100007284
292 Ga0070672_100046206
293 Ga0070696_100010191
294 Ga0070693_100094108
295 Ga0070665_100009394
296 Ga0070665_100116702
297 Ga0070704_100000770
298 Ga0070664_100010461
299 Ga0070664_100018009
300 Ga0070664_100321683
301 Ga0068857_100007979
302 Ga0068864_100028356
303 Ga0068864_100047202
304 Ga0068864_100075879
305 Ga0068864_100193938
306 Ga0068870_10000924
307 Ga0068863_100007578
308 Ga0068858_100092949
309 Ga0068862_100002663
310 Ga0075428_100010124
311 Ga0075428_100014353
312 Ga0075428_100045058
313 Ga0075430_100061758
314 Ga0075431_100037694
315 Ga0075431_100038367
316 Ga0075431_100168226
317 Ga0075431_100302449
318 Ga0075433_10200889
319 Ga0075429_100139566
320 Ga0075436_100078684
321 Ga0075435_100024725
322 Ga0075435_100176224
323 Ga0105240_10038991
324 Ga0111539_10165028
325 Ga0114129_10008671
326 Ga0114129_10023433
327 Ga0114129_10166289
328 Ga0105241_10000042
329 Ga0105237_10070178
330 Ga0105239_10017839
331 Ga0157370_10058472
332 Ga0157374_10091664
333 Ga0163162_10001162
334 Ga0157375_10067167
335 Ga0163163_10097556
336 Ga0157379_10054163
337 Ga0157379_10060692
338 Ga0207643_10000780
339 Ga0207684_10033813
340 Ga0207654_10000038
341 Ga0207695_10137166
342 Ga0207663_10024190
343 Ga0207660_10054792
344 Ga0207657_10000818
345 Ga0207657_10031000
346 Ga0207657_10093518
347 Ga0207649_10077769
348 Ga0207652_10124180
349 Ga0207652_10165516
350 Ga0207646_10016981
351 Ga0207646_10041682
352 Ga0207646_10188512
353 Ga0207646_10204408
354 Ga0207681_10006976
355 Ga0207694_10074038
356 Ga0207650_10011091
357 Ga0207664_10094027
358 Ga0207706_10036605
359 Ga0207669_10024159
360 Ga0207691_10000797
361 Ga0207691_10031608
362 Ga0207661_10071662
363 Ga0207679_10010832
364 Ga0207679_10066117
365 Ga0207667_10006168
366 Ga0207651_10058300
367 Ga0207712_10000958
368 Ga0207703_10087589
369 Ga0207678_10050133
370 Ga0207678_10163899
371 Ga0207641_10010561
372 Ga0207648_10142156
373 Ga0207676_10059113
374 Ga0207676_10063717
375 Ga0207676_10175273
376 Ga0207676_10216428
377 Ga0207674_10019757
378 Ga0268265_10002817
379 Ga0307405_10053464
380 Ga0307405_10077681
381 Ga0307413_10007647
382 Ga0307413_10124135
383 Ga0307410_10000760
384 Ga0307410_10002647
385 Ga0307410_10017176
386 Ga0307410_10017277
387 Ga0307406_10007354
388 Ga0307406_10008497
389 Ga0307406_10031453
390 Ga0307406_10131745
391 Ga0307407_10000646
392 Ga0307407_10003430
393 Ga0307407_10087097
394 Ga0307409_100000637
395 Ga0307409_100045786
396 Ga0307409_100084436
397 Ga0307416_100000294
398 Ga0307416_100003299
399 Ga0307416_100008585
400 Ga0307416_100031932
401 Ga0307416_100156220
402 Ga0307416_100222428
403 Ga0307414_10012998
404 Ga0307414_10052371
405 Ga0307414_10103570
406 Ga0307411_10009328
407 Ga0307411_10038284
408 Ga0307415_100000344
409 Ga0307415_100002286
410 Ga0373931_0006439
411 Ga0373931_0014671
412 Ga0439433_0008557
413 Ga0439462_0009781
414 Ga0451577_0280353
415 Ga0466966_0005438
416 Ga0466959_0003893
417 Ga0495667_0034725
418 Ga0496100_0176731
419 Ga0496102_0003097
420 Ga0496102_0056109
421 Ga0496102_0071659
422 Ga0496102_0137255
423 Ga0496104_0010714
424 Ga0496108_0000686
425 Ga0496108_0026711
426 Ga0496109_0001555
427 Ga0496109_0004485
428 Ga0496109_0017160
429 Ga0496109_0024293
430 Ga0496109_0100145
431 Ga0496110_0002599
432 Ga0496110_0006751
433 Ga0496110_0032178
434 Ga0496110_0106432
435 Ga0496112_0006322
436 Ga0496112_0014368
437 Ga0496112_0022020
438 Ga0496113_0008081
439 Ga0496113_0012933
440 Ga0501031_0124935
441 Ga0501034_0000907
442 Ga0501041_0053880
443 Ga0501046_0084259
444 Ga0501048_0070327
445 Ga0501067_0000356
446 Ga0501067_0085971
447 Ga0501068_0000609
448 Ga0501069_0001483
449 Ga0501069_0002297
450 Ga0501069_0002476
451 Ga0501070_0000532
452 Ga0501070_0057064
453 Ga0501070_0193533
454 Ga0501071_0000243
455 Ga0501071_0157704
456 Ga0501072_0000203
457 Ga0501073_0003230
458 Ga0501073_0015403
459 Ga0501074_0000554
460 Ga0501076_0192258
461 Ga0501077_0037959
462 Ga0501243_007454
463 Ga0501079_0025628
464 Ga0501079_0048311
465 Ga0501080_0000191
466 Ga0501080_0020761
467 Ga0501080_0029126
468 Ga0501080_0037060
469 Ga0501080_0251399
470 Ga0501081_0090295
471 Ga0501083_0012123
472 Ga0501045_0024038
473 Ga0501045_0046734
474 nmdc:mga05p37_13456_c1
475 nmdc:mga05p37_76366_c1
476 nmdc:mga09592_27146_c1
477 nmdc:mga0qj67_87310_c1
478 nmdc:mga06r32_291965_c1
479 nmdc:mga06r32_82752_c1
480 nmdc:mga0n895_4710_c1
481 nmdc:mga0rr50_151929_c1
482 nmdc:mga0a205_144003_c1
483 Ga0501084_0001203
484 Ga0501084_0007551
485 Ga0501084_0019534
486 Ga0501084_0045695
487 Ga0590071_000123
488 Ga0590071_002026
489 Ga0590075_000404
490 Ga0590077_002141
491 Ga0590077_005448
492 Ga0501082_0000999
493 Ga0501082_0003204
494 Ga0501082_0033347

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10396

TrmE_N

GTP-binding protein TrmE N-terminus

67

182

0.97

PF12631

MnmE_helical

MnmE helical domain

185

495

0.89

PF02421

FeoB_N

Ferrous iron transport protein B

279

367

0.85

PF01926

MMR_HSR1

50S ribosome-binding GTPase

280

390

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9471 4 119
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.9386 2 121
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9238 4 119
3gei-assembly2.cif.gz_C crystal structure of mnme from chlorobium tepidum in complex with gcp 0.8529 4 441
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.8491 2 121
ID Description Score Start End Superfamily
af_I1JVH7_75_204_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9676 4 119 3.30.1360.120
af_Q2FUQ2_1_124_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9563 1 119 3.30.1360.120
af_Q9UTE7_14_142_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9493 4 119 3.30.1360.120
1xzqB00 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9471 4 119 3.30.1360.120
af_P25522_1_121_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9448 2 121 3.30.1360.120
ID Description Score Start End GO Terms
AF-A0A7Z9MME3-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9742 4 208 GO:0002098
GO:0005525
GO:0005737
GO:0030488
AF-A0A7Y2P8Y0-F1-model_v4 GTP-binding protein TrmE N-terminal domain-containing protein 0.9718 2 121 GO:0002098
GO:0005525
GO:0005737
GO:0030488
AF-A0A014DS15-F1-model_v4 deleted 0.9708 2 141
AF-A0A4V1UG93-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9699 2 135 GO:0002098
GO:0005525
GO:0005737
GO:0030488
AF-A0A2G6KLX2-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9623 3 123 GO:0002098
GO:0005525
GO:0005829
GO:0030488

Map