F359200

General Info

Members Datasets Scaffolds Average Seq Length
247 144 247 277

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_0789905|Ga0436363_0789905_1501_2460
Length 319
Sequence MVRAIKRVMRLSPVKSDVSALTLWYRASAMSPRETSSRRQFVSTLVAAPLAAVGARGADKSTKIPIGLELYSVRHELEKDPGGTLDSVAKMGYECVEFYAPYYDWTPEHANDVRKQLDGVGLRCYSTHNGMASFKPEGLDKAIELNKILGCRYIVLAHPGSNISTLDDWKGLAEMLNKANEKFSSAGLHAGYHNHDAEWKPVDGQKPLELIAHNTDKSVMLQLDVGTCVETGNDPVAWIESNPGRIRSMHVKDWSPNGGYQVLVGEGAVPWKKLFAAAESKGGIEYYLIEQEGSRFPELETAERCLIAYRDLRAGKART

Samples

Sample ID Description Type Environment
1 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
69 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.38
Metatranscriptomes 1.62
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.43
Rhizosphere 83.81
Stem 0
Stem Tuber 0
Unclassified 13.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058863_11910801 3300004799 Bacteria 1637
2 Ga0058862_12703119 3300004803 Bacteria 1489
3 Ga0070683_100063287 3300005329 Bacteria 3441
4 Ga0070670_100322670 3300005331 Bacteria 1353
5 Ga0068869_100065133 3300005334 Bacteria 2682
6 Ga0068869_100117233 3300005334 Unclassified 2032
7 Ga0068868_100162957 3300005338 Bacteria 1843
8 Ga0070660_100036671 3300005339 Bacteria 3715
9 Ga0070660_100107273 3300005339 Unclassified 2219
10 Ga0070671_100077874 3300005355 Bacteria 2771
11 Ga0070674_100032698 3300005356 Bacteria 3455
12 Ga0070659_100075576 3300005366 Bacteria 2685
13 Ga0070714_100473633 3300005435 Unclassified 1192
14 Ga0070713_100052247 3300005436 Unclassified 3383
15 Ga0070713_100395852 3300005436 Bacteria 1289
16 Ga0070694_100055303 3300005444 Bacteria 2691
17 Ga0070708_100094949 3300005445 Bacteria 2722
18 Ga0070663_100142006 3300005455 Bacteria 1834
19 Ga0070678_100056686 3300005456 Bacteria 2867
20 Ga0070662_100142693 3300005457 Bacteria 1858
21 Ga0070679_100040717 3300005530 Unclassified 4623
22 Ga0070684_100032350 3300005535 Unclassified 4457
23 Ga0068853_100041970 3300005539 Bacteria 3909
24 Ga0070686_100258186 3300005544 Unclassified 1276
25 Ga0070696_100025773 3300005546 Bacteria 3999
26 Ga0070693_100059183 3300005547 Bacteria 2220
27 Ga0070693_100187109 3300005547 Unclassified 1337
28 Ga0070665_100029705 3300005548 Bacteria 5500
29 Ga0070665_100064029 3300005548 Bacteria 3687
30 Ga0070665_100219839 3300005548 Unclassified 1900
31 Ga0070665_100246471 3300005548 Bacteria 1787
32 Ga0070665_100323015 3300005548 Unclassified 1548
33 Ga0070665_100433613 3300005548 Bacteria 1323
34 Ga0070704_100017759 3300005549 Bacteria 4533
35 Ga0068855_100004019 3300005563 Bacteria 17967
36 Ga0068855_100037562 3300005563 Bacteria 5759
37 Ga0068855_100054648 3300005563 Bacteria 4693
38 Ga0070664_100016893 3300005564 Bacteria 5989
39 Ga0070664_100167856 3300005564 Bacteria 1945
40 Ga0068857_100460293 3300005577 Bacteria 1190
41 Ga0068857_100601232 3300005577 Unclassified 1040
42 Ga0068854_100122301 3300005578 Bacteria 1978
43 Ga0068856_100016688 3300005614 Bacteria 7111
44 Ga0068861_100275854 3300005719 Unclassified 1446
45 Ga0068863_100233953 3300005841 Bacteria 1773
46 Ga0068863_100308776 3300005841 Bacteria 1535
47 Ga0081455_10041471 3300005937 Bacteria 4047
48 Ga0081455_10062782 3300005937 Bacteria 3121
49 Ga0081455_10269625 3300005937 Unclassified 1235
50 Ga0081540_1064806 3300005983 Bacteria 1722
51 Ga0097621_100026778 3300006237 Bacteria 4527
52 Ga0097621_100094507 3300006237 Bacteria 2506
53 Ga0097621_100431091 3300006237 Bacteria 1185
54 Ga0068871_100072985 3300006358 Bacteria 2828
55 Ga0075430_100029496 3300006846 Bacteria 4657
56 Ga0075430_100238928 3300006846 Bacteria 1506
57 Ga0075431_100079324 3300006847 Bacteria 3388
58 Ga0075431_100382269 3300006847 Bacteria 1412
59 Ga0075433_10101307 3300006852 Bacteria 2550
60 Ga0075433_10604290 3300006852 Unclassified 963
61 Ga0075434_100029578 3300006871 Bacteria 5390
62 Ga0075434_100042690 3300006871 Bacteria 4496
63 Ga0075429_100006747 3300006880 Bacteria 9953
64 Ga0075435_100344174 3300007076 Bacteria 1277
65 Ga0075435_100463253 3300007076 Bacteria 1094
66 Ga0105240_10005609 3300009093 Bacteria 18632
67 Ga0105240_10177417 3300009093 Bacteria 2518
68 Ga0105240_10240758 3300009093 Bacteria 2097
69 Ga0105240_10612556 3300009093 Unclassified 1197
70 Ga0105245_10000995 3300009098 Bacteria 25730
71 Ga0105245_10183094 3300009098 Unclassified 2003
72 Ga0105245_10201563 3300009098 Bacteria 1911
73 Ga0105247_10051409 3300009101 Unclassified 2537
74 Ga0114129_10004714 3300009147 Bacteria 19252
75 Ga0114129_10009737 3300009147 Bacteria 13707
76 Ga0105243_10090675 3300009148 Bacteria 2516
77 Ga0105241_10093312 3300009174 Unclassified 2378
78 Ga0105242_10064141 3300009176 Bacteria 3027
79 Ga0105242_10074720 3300009176 Unclassified 2820
80 Ga0105248_10010010 3300009177 Bacteria 10438
81 Ga0105248_10203610 3300009177 Bacteria 2230
82 Ga0105248_10222948 3300009177 Unclassified 2122
83 Ga0105248_10443744 3300009177 Unclassified 1462
84 Ga0105237_10555928 3300009545 Bacteria 1154
85 Ga0105238_10003582 3300009551 Bacteria 15484
86 Ga0105238_10067234 3300009551 Unclassified 3585
87 Ga0105238_10605162 3300009551 Bacteria 1104
88 Ga0105249_10099935 3300009553 Bacteria 2727
89 Ga0105249_10590853 3300009553 Unclassified 1164
90 Ga0105249_10664220 3300009553 Bacteria 1100
91 Ga0105239_10035014 3300010375 Bacteria 5514
92 Ga0157373_10084684 3300013100 Unclassified 2234
93 Ga0157369_10009422 3300013105 Bacteria 11163
94 Ga0157369_10122881 3300013105 Bacteria 2754
95 Ga0157369_10385992 3300013105 Bacteria 1453
96 Ga0157374_10039647 3300013296 Bacteria 4335
97 Ga0157374_10150766 3300013296 Bacteria 2260
98 Ga0157374_10784717 3300013296 Bacteria 968
99 Ga0157378_10003102 3300013297 Bacteria 14775
100 Ga0163162_10243053 3300013306 Bacteria 1931
101 Ga0163162_10314083 3300013306 Bacteria 1700
102 Ga0157372_10022832 3300013307 Bacteria 6774
103 Ga0157372_10116471 3300013307 Bacteria 3064
104 Ga0157372_10174804 3300013307 Bacteria 2485
105 Ga0157372_10654302 3300013307 Bacteria 1224
106 Ga0163163_10154200 3300014325 Bacteria 2341
107 Ga0163163_10195497 3300014325 Bacteria 2070
108 Ga0163163_10359145 3300014325 Bacteria 1513
109 Ga0163161_10306269 3300017792 Bacteria 1252
110 Ga0206350_10051832 3300020080 Unclassified 2516
111 Ga0213873_10016124 3300021358 Bacteria 1684
112 Ga0213872_10020924 3300021361 Bacteria 3013
113 Ga0213876_10008325 3300021384 Bacteria 5611
114 Ga0213876_10009218 3300021384 Bacteria 5316
115 Ga0213876_10047881 3300021384 Bacteria 2260
116 Ga0213876_10217639 3300021384 Unclassified 1016
117 Ga0213875_10000069 3300021388 Bacteria 121776
118 Ga0213875_10002976 3300021388 Bacteria 9872
119 Ga0213875_10015038 3300021388 Unclassified 3768
120 Ga0213875_10023631 3300021388 Bacteria 2935
121 Ga0213875_10047858 3300021388 Bacteria 2006
122 Ga0213875_10058998 3300021388 Bacteria 1796
123 Ga0213875_10087804 3300021388 Bacteria 1450
124 Ga0213871_10008234 3300021441 Bacteria 2290
125 Ga0224712_10017471 3300022467 Unclassified 2379
126 Ga0207697_10124513 3300025315 Unclassified 1111
127 Ga0207684_10047180 3300025910 Bacteria 3654
128 Ga0207695_10009986 3300025913 Bacteria 11663
129 Ga0207695_10144066 3300025913 Bacteria 2329
130 Ga0207695_10174162 3300025913 Unclassified 2075
131 Ga0207663_10130349 3300025916 Bacteria 1736
132 Ga0207660_10364132 3300025917 Unclassified 1160
133 Ga0207657_10066128 3300025919 Bacteria 3078
134 Ga0207649_10195908 3300025920 Bacteria 1424
135 Ga0207646_10010305 3300025922 Bacteria 9142
136 Ga0207694_10037155 3300025924 Bacteria 3738
137 Ga0207687_10171747 3300025927 Bacteria 1672
138 Ga0207664_10301423 3300025929 Bacteria 1410
139 Ga0207644_10069579 3300025931 Bacteria 2570
140 Ga0207690_10129808 3300025932 Bacteria 1843
141 Ga0207686_10029808 3300025934 Bacteria 3223
142 Ga0207686_10046398 3300025934 Unclassified 2680
143 Ga0207669_10002051 3300025937 Bacteria 8527
144 Ga0207704_10020837 3300025938 Bacteria 3477
145 Ga0207704_10097004 3300025938 Bacteria 1954
146 Ga0207661_10073569 3300025944 Unclassified 2799
147 Ga0207679_10307331 3300025945 Unclassified 1369
148 Ga0207667_10006940 3300025949 Bacteria 13685
149 Ga0207667_10032812 3300025949 Bacteria 5590
150 Ga0207667_10049461 3300025949 Unclassified 4439
151 Ga0207667_10487909 3300025949 Bacteria 1250
152 Ga0207712_10592182 3300025961 Unclassified 958
153 Ga0207668_10179373 3300025972 Unclassified 1669
154 Ga0207658_10145211 3300025986 Bacteria 1926
155 Ga0207677_10140899 3300026023 Bacteria 1846
156 Ga0207641_10160971 3300026088 Bacteria 2041
157 Ga0207641_10173919 3300026088 Bacteria 1968
158 Ga0207648_10018872 3300026089 Bacteria 6231
159 Ga0207698_10052266 3300026142 Unclassified 3129
160 Ga0207428_10006184 3300027907 Bacteria 11061
161 Ga0268266_10255577 3300028379 Unclassified 1622
162 Ga0268266_10360051 3300028379 Unclassified 1369
163 Ga0268266_10364620 3300028379 Unclassified 1360
164 Ga0265316_10037751 3300031344 Bacteria 3896
165 Ga0265314_10062057 3300031711 Unclassified 2542
166 Ga0373943_0165219 3300035170 Unclassified 1208
167 Ga0373946_0068979 3300035171 Bacteria 1522
168 Ga0373927_0001192 3300035695 Bacteria 19728
169 Ga0373947_0045576 3300035725 Unclassified 2624
170 Ga0373947_0177978 3300035725 Unclassified 1383
171 Ga0373947_0254709 3300035725 Unclassified 1162
172 Ga0373937_0210397 3300036401 Unclassified 1830
173 Ga0436364_0234303 3300037853 Bacteria 2121
174 Ga0436364_0278774 3300037853 Bacteria 400541
175 Ga0436364_0566978 3300037853 Bacteria 5448
176 Ga0436364_0628875 3300037853 Viruses 1068
177 Ga0436364_0683664 3300037853 Bacteria 2434
178 Ga0436364_0686316 3300037853 Bacteria 5261
179 Ga0436364_0966183 3300037853 Bacteria 12225
180 Ga0436364_1061374 3300037853 Bacteria 1540
181 Ga0436364_1086888 3300037853 Bacteria 6908
182 Ga0436364_1109545 3300037853 Bacteria 3568
183 Ga0436364_1274386 3300037853 Bacteria 1479
184 Ga0436364_1340575 3300037853 Bacteria 24366
185 Ga0436364_1429601 3300037853 Bacteria 1838
186 Ga0436364_1455629 3300037853 Unclassified 1714
187 Ga0436365_0263529 3300039437 Bacteria 1817
188 Ga0436365_0690405 3300039437 Bacteria 3023
189 Ga0436365_0864892 3300039437 Bacteria 30275
190 Ga0436365_1079808 3300039437 Bacteria 1877
191 Ga0436360_0247170 3300039438 Unclassified 1017
192 Ga0436360_0823100 3300039438 Bacteria 6568
193 Ga0436361_0139021 3300039447 Bacteria 59763
194 Ga0436361_1029109 3300039447 Bacteria 2566
195 Ga0436363_0266074 3300039450 Unclassified 2840
196 Ga0436363_0789905 3300039450 Bacteria 2525
197 Ga0436363_0930765 3300039450 Bacteria 1511
198 Ga0436363_1050950 3300039450 Unclassified 1834
199 Ga0436363_1634836 3300039450 Bacteria 10381
200 Ga0436362_0198564 3300039453 Bacteria 6306
201 Ga0436362_0871827 3300039453 Bacteria 1810
202 Ga0466963_0075987 3300044694 Unclassified 2268
203 Ga0495592_0093838 3300046454 Bacteria 2149
204 Ga0495582_0002852 3300046473 Bacteria 9672
205 Ga0495664_0077342 3300046477 Unclassified 1992
206 Ga0495630_0106525 3300046517 Bacteria 2123
207 Ga0495652_0211777 3300046529 Unclassified 1462
208 Ga0495586_0009945 3300046535 Bacteria 5066
209 Ga0495587_0039922 3300046536 Bacteria 2807
210 Ga0495645_0002814 3300046543 Bacteria 11802
211 Ga0495667_0057710 3300046559 Bacteria 2551
212 Ga0495635_0134940 3300046663 Unclassified 1682
213 Ga0495599_0052605 3300046678 Unclassified 2551
214 Ga0495658_0169878 3300046683 Bacteria 1349
215 Ga0495674_0081889 3300047319 Unclassified 2768
216 Ga0495675_0095472 3300047444 Bacteria 1864
217 Ga0495684_0017995 3300047471 Bacteria 5444
218 Ga0495684_0055645 3300047471 Bacteria 3017
219 Ga0495684_0550570 3300047471 Unclassified 785
220 Ga0496102_0345573 3300048905 Bacteria 1401
221 Ga0496109_0000047 3300048912 Bacteria 130578
222 Ga0496112_0143908 3300048915 Bacteria 2353
223 Ga0496114_0086563 3300048917 Unclassified 2656
224 Ga0496115_0009060 3300048918 Bacteria 7385
225 Ga0496115_0095459 3300048918 Bacteria 2434
226 Ga0501081_0338820 3300049743 Bacteria 1107
227 Ga0501044_0554662 3300049823 Unclassified 1046
228 nmdc:mga05p37_32340_c1 3300050507 Bacteria 6397
229 nmdc:mga05p37_97828_c1 3300050507 Bacteria 3615
230 nmdc:mga09592_5199_c1 3300050508 Bacteria 10570
231 nmdc:mga0qj67_148907_c1 3300050509 Unclassified 1898
232 nmdc:mga0qj67_262560_c1 3300050509 Bacteria 1400
233 nmdc:mga0qj67_301758_c1 3300050509 Unclassified 1297
234 nmdc:mga06r32_110764_c1 3300050510 Bacteria 2701
235 nmdc:mga06r32_121684_c1 3300050510 Bacteria 2575
236 nmdc:mga06r32_41919_c1 3300050510 Bacteria 4350
237 nmdc:mga0n895_6889_c1 3300050512 Bacteria 9708
238 nmdc:mga0n895_744130_c1 3300050512 Bacteria 974
239 nmdc:mga0n895_8777_c1 3300050512 Bacteria 8790
240 nmdc:mga0rr50_363151_c1 3300050513 Bacteria 1219
241 nmdc:mga08x19_7945_c1 3300050514 Bacteria 6304
242 nmdc:mga0a205_187470_c1 3300050515 Bacteria 1961
243 nmdc:mga0a205_224996_c1 3300050515 Bacteria 1761
244 nmdc:mga0a205_85510_c1 3300050515 Bacteria 3046
245 Ga0495601_0088117 3300053077 Unclassified 1996
246 Ga0501082_0060177 3300060353 Bacteria 3271
247 Ga0466962_0203454 3300061719 Unclassified 968

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050513 nmdc:mga0rr50_363151_c1 nmdc:mga0rr50_363151_c1_500_1198 220
2 3300047471 Ga0495684_0550570 Ga0495684_0550570_65_757 223
3 3300053077 Ga0495601_0088117 Ga0495601_0088117_19_711 223
4 3300050509 nmdc:mga0qj67_301758_c1 nmdc:mga0qj67_301758_c1_555_1286 240
5 3300013307 Ga0157372_10116471 Ga0157372_101164714 245
6 3300049823 Ga0501044_0554662 Ga0501044_0554662_56_814 250
7 3300026142 Ga0207698_10052266 Ga0207698_100522661 251
8 3300005334 Ga0068869_100065133 Ga0068869_1000651332 256
9 3300005339 Ga0070660_100107273 Ga0070660_1001072732 256
10 3300005355 Ga0070671_100077874 Ga0070671_1000778742 256
11 3300005457 Ga0070662_100142693 Ga0070662_1001426932 256
12 3300005535 Ga0070684_100032350 Ga0070684_1000323501 256
13 3300005539 Ga0068853_100041970 Ga0068853_1000419702 256
14 3300005544 Ga0070686_100258186 Ga0070686_1002581862 256
15 3300005547 Ga0070693_100059183 Ga0070693_1000591831 256
16 3300005547 Ga0070693_100187109 Ga0070693_1001871091 256
17 3300005563 Ga0068855_100004019 Ga0068855_1000040195 256
18 3300005578 Ga0068854_100122301 Ga0068854_1001223012 256
19 3300006237 Ga0097621_100094507 Ga0097621_1000945073 256
20 3300009093 Ga0105240_10612556 Ga0105240_106125562 256
21 3300009098 Ga0105245_10000995 Ga0105245_1000099519 256
22 3300009101 Ga0105247_10051409 Ga0105247_100514092 256
23 3300009176 Ga0105242_10064141 Ga0105242_100641413 256
24 3300009176 Ga0105242_10074720 Ga0105242_100747202 256
25 3300009177 Ga0105248_10010010 Ga0105248_100100102 256
26 3300009551 Ga0105238_10003582 Ga0105238_1000358217 256
27 3300009551 Ga0105238_10067234 Ga0105238_100672342 256
28 3300010375 Ga0105239_10035014 Ga0105239_100350142 256
29 3300013296 Ga0157374_10150766 Ga0157374_101507663 256
30 3300014325 Ga0163163_10359145 Ga0163163_103591452 256
31 3300025924 Ga0207694_10037155 Ga0207694_100371553 256
32 3300025931 Ga0207644_10069579 Ga0207644_100695795 256
33 3300025934 Ga0207686_10046398 Ga0207686_100463982 256
34 3300025938 Ga0207704_10020837 Ga0207704_100208373 256
35 3300025938 Ga0207704_10097004 Ga0207704_100970041 256
36 3300025944 Ga0207661_10073569 Ga0207661_100735693 256
37 3300025949 Ga0207667_10006940 Ga0207667_100069405 256
38 3300026089 Ga0207648_10018872 Ga0207648_100188722 256
39 3300005444 Ga0070694_100055303 Ga0070694_1000553032 257
40 3300005530 Ga0070679_100040717 Ga0070679_1000407175 257
41 3300005546 Ga0070696_100025773 Ga0070696_1000257733 257
42 3300005549 Ga0070704_100017759 Ga0070704_1000177594 257
43 3300006852 Ga0075433_10101307 Ga0075433_101013073 257
44 3300006871 Ga0075434_100029578 Ga0075434_1000295784 257
45 3300006871 Ga0075434_100042690 Ga0075434_1000426902 257
46 3300007076 Ga0075435_100344174 Ga0075435_1003441742 257
47 3300025910 Ga0207684_10047180 Ga0207684_100471802 257
48 3300025922 Ga0207646_10010305 Ga0207646_100103054 257
49 3300050512 nmdc:mga0n895_6889_c1 nmdc:mga0n895_6889_c1_570_1415 257
50 3300050512 nmdc:mga0n895_8777_c1 nmdc:mga0n895_8777_c1_3434_4279 257
51 3300050514 nmdc:mga08x19_7945_c1 nmdc:mga08x19_7945_c1_2559_3404 257
52 3300050515 nmdc:mga0a205_85510_c1 nmdc:mga0a205_85510_c1_1884_2729 257
53 3300009147 Ga0114129_10009737 Ga0114129_100097377 260
54 3300005841 Ga0068863_100308776 Ga0068863_1003087762 261
55 3300014325 Ga0163163_10195497 Ga0163163_101954972 261
56 3300026088 Ga0207641_10173919 Ga0207641_101739192 261
57 3300050512 nmdc:mga0n895_744130_c1 nmdc:mga0n895_744130_c1_54_905 264
58 3300025929 Ga0207664_10301423 Ga0207664_103014232 265
59 3300050515 nmdc:mga0a205_187470_c1 nmdc:mga0a205_187470_c1_1088_1900 265
60 3300006880 Ga0075429_100006747 Ga0075429_1000067473 266
61 3300009147 Ga0114129_10004714 Ga0114129_100047144 266
62 3300050507 nmdc:mga05p37_32340_c1 nmdc:mga05p37_32340_c1_2184_3053 266
63 3300050508 nmdc:mga09592_5199_c1 nmdc:mga09592_5199_c1_7640_8509 266
64 3300046663 Ga0495635_0134940 Ga0495635_0134940_803_1657 267
65 3300005338 Ga0068868_100162957 Ga0068868_1001629572 269
66 3300005436 Ga0070713_100395852 Ga0070713_1003958521 269
67 3300005841 Ga0068863_100233953 Ga0068863_1002339532 269
68 3300009148 Ga0105243_10090675 Ga0105243_100906752 269
69 3300014325 Ga0163163_10154200 Ga0163163_101542002 269
70 3300026023 Ga0207677_10140899 Ga0207677_101408992 269
71 3300026088 Ga0207641_10160971 Ga0207641_101609712 269
72 3300005548 Ga0070665_100323015 Ga0070665_1003230152 270
73 3300028379 Ga0268266_10360051 Ga0268266_103600512 270
74 3300035695 Ga0373927_0001192 Ga0373927_0001192_16025_16849 270
75 3300035725 Ga0373947_0045576 Ga0373947_0045576_341_1165 270
76 3300005548 Ga0070665_100246471 Ga0070665_1002464712 271
77 3300013306 Ga0163162_10243053 Ga0163162_102430531 271
78 3300017792 Ga0163161_10306269 Ga0163161_103062692 271
79 3300046454 Ga0495592_0093838 Ga0495592_0093838_1116_1982 271
80 3300046473 Ga0495582_0002852 Ga0495582_0002852_3471_4298 271
81 3300046477 Ga0495664_0077342 Ga0495664_0077342_927_1793 271
82 3300046517 Ga0495630_0106525 Ga0495630_0106525_112_978 271
83 3300046529 Ga0495652_0211777 Ga0495652_0211777_172_1038 271
84 3300046535 Ga0495586_0009945 Ga0495586_0009945_2386_3213 271
85 3300046536 Ga0495587_0039922 Ga0495587_0039922_1517_2383 271
86 3300046543 Ga0495645_0002814 Ga0495645_0002814_8986_9852 271
87 3300046559 Ga0495667_0057710 Ga0495667_0057710_1342_2208 271
88 3300046678 Ga0495599_0052605 Ga0495599_0052605_906_1772 271
89 3300046683 Ga0495658_0169878 Ga0495658_0169878_459_1286 271
90 3300047471 Ga0495684_0017995 Ga0495684_0017995_1532_2398 271
91 3300009177 Ga0105248_10443744 Ga0105248_104437442 272
92 3300013306 Ga0163162_10314083 Ga0163162_103140832 272
93 3300039437 Ga0436365_1079808 Ga0436365_1079808_484_1311 272
94 3300044694 Ga0466963_0075987 Ga0466963_0075987_905_1771 272
95 3300061719 Ga0466962_0203454 Ga0466962_0203454_74_940 272
96 3300006237 Ga0097621_100026778 Ga0097621_1000267784 273
97 3300009177 Ga0105248_10222948 Ga0105248_102229482 273
98 3300013297 Ga0157378_10003102 Ga0157378_100031022 273
99 3300025934 Ga0207686_10029808 Ga0207686_100298082 273
100 3300005937 Ga0081455_10269625 Ga0081455_102696252 274
101 3300009551 Ga0105238_10605162 Ga0105238_106051621 274
102 3300013307 Ga0157372_10174804 Ga0157372_101748042 274
103 3300013307 Ga0157372_10654302 Ga0157372_106543021 274
104 3300021388 Ga0213875_10047858 Ga0213875_100478582 274
105 3300025917 Ga0207660_10364132 Ga0207660_103641322 274
106 3300025949 Ga0207667_10487909 Ga0207667_104879092 274
107 3300035171 Ga0373946_0068979 Ga0373946_0068979_461_1297 274
108 3300037853 Ga0436364_0686316 Ga0436364_0686316_3938_4768 274
109 3300048915 Ga0496112_0143908 Ga0496112_0143908_717_1655 274
110 3300005937 Ga0081455_10062782 Ga0081455_100627823 275
111 3300005983 Ga0081540_1064806 Ga0081540_10648061 275
112 3300006847 Ga0075431_100079324 Ga0075431_1000793242 275
113 3300021384 Ga0213876_10009218 Ga0213876_100092184 275
114 3300027907 Ga0207428_10006184 Ga0207428_100061844 275
115 3300039437 Ga0436365_0864892 Ga0436365_0864892_27650_28495 275
116 3300039438 Ga0436360_0247170 Ga0436360_0247170_108_956 275
117 3300050507 nmdc:mga05p37_97828_c1 nmdc:mga05p37_97828_c1_1247_2110 275
118 3300050509 nmdc:mga0qj67_262560_c1 nmdc:mga0qj67_262560_c1_444_1307 275
119 3300050510 nmdc:mga06r32_121684_c1 nmdc:mga06r32_121684_c1_387_1250 275
120 3300060353 Ga0501082_0060177 Ga0501082_0060177_106_939 275
121 3300005329 Ga0070683_100063287 Ga0070683_1000632872 276
122 3300005356 Ga0070674_100032698 Ga0070674_1000326984 276
123 3300005548 Ga0070665_100433613 Ga0070665_1004336131 276
124 3300005564 Ga0070664_100167856 Ga0070664_1001678562 276
125 3300005937 Ga0081455_10041471 Ga0081455_100414714 276
126 3300006846 Ga0075430_100029496 Ga0075430_1000294964 276
127 3300006846 Ga0075430_100238928 Ga0075430_1002389282 276
128 3300006852 Ga0075433_10604290 Ga0075433_106042901 276
129 3300007076 Ga0075435_100463253 Ga0075435_1004632531 276
130 3300009093 Ga0105240_10005609 Ga0105240_1000560917 276
131 3300009098 Ga0105245_10183094 Ga0105245_101830942 276
132 3300009098 Ga0105245_10201563 Ga0105245_102015632 276
133 3300021384 Ga0213876_10008325 Ga0213876_100083254 276
134 3300025315 Ga0207697_10124513 Ga0207697_101245132 276
135 3300025913 Ga0207695_10009986 Ga0207695_100099868 276
136 3300025927 Ga0207687_10171747 Ga0207687_101717472 276
137 3300025937 Ga0207669_10002051 Ga0207669_100020516 276
138 3300025945 Ga0207679_10307331 Ga0207679_103073312 276
139 3300025972 Ga0207668_10179373 Ga0207668_101793732 276
140 3300028379 Ga0268266_10364620 Ga0268266_103646202 276
141 3300031344 Ga0265316_10037751 Ga0265316_100377512 276
142 3300031711 Ga0265314_10062057 Ga0265314_100620572 276
143 3300035170 Ga0373943_0165219 Ga0373943_0165219_80_940 276
144 3300035725 Ga0373947_0254709 Ga0373947_0254709_66_926 276
145 3300036401 Ga0373937_0210397 Ga0373937_0210397_726_1583 276
146 3300037853 Ga0436364_1455629 Ga0436364_1455629_715_1554 276
147 3300047319 Ga0495674_0081889 Ga0495674_0081889_683_1540 276
148 3300047444 Ga0495675_0095472 Ga0495675_0095472_949_1806 276
149 3300047471 Ga0495684_0055645 Ga0495684_0055645_122_979 276
150 3300048912 Ga0496109_0000047 Ga0496109_0000047_79039_79923 276
151 3300048917 Ga0496114_0086563 Ga0496114_0086563_564_1409 276
152 3300048918 Ga0496115_0095459 Ga0496115_0095459_809_1723 276
153 3300049743 Ga0501081_0338820 Ga0501081_0338820_82_954 276
154 3300050509 nmdc:mga0qj67_148907_c1 nmdc:mga0qj67_148907_c1_787_1629 276
155 3300050510 nmdc:mga06r32_110764_c1 nmdc:mga06r32_110764_c1_823_1695 276
156 3300050515 nmdc:mga0a205_224996_c1 nmdc:mga0a205_224996_c1_180_1052 276
157 3300005331 Ga0070670_100322670 Ga0070670_1003226701 277
158 3300005334 Ga0068869_100117233 Ga0068869_1001172331 277
159 3300005339 Ga0070660_100036671 Ga0070660_1000366713 277
160 3300005366 Ga0070659_100075576 Ga0070659_1000755762 277
161 3300005436 Ga0070713_100052247 Ga0070713_1000522472 277
162 3300005445 Ga0070708_100094949 Ga0070708_1000949492 277
163 3300005456 Ga0070678_100056686 Ga0070678_1000566863 277
164 3300005548 Ga0070665_100064029 Ga0070665_1000640292 277
165 3300005548 Ga0070665_100219839 Ga0070665_1002198392 277
166 3300005563 Ga0068855_100037562 Ga0068855_1000375625 277
167 3300005563 Ga0068855_100054648 Ga0068855_1000546484 277
168 3300005564 Ga0070664_100016893 Ga0070664_1000168935 277
169 3300005577 Ga0068857_100601232 Ga0068857_1006012321 277
170 3300005614 Ga0068856_100016688 Ga0068856_1000166884 277
171 3300005719 Ga0068861_100275854 Ga0068861_1002758541 277
172 3300006237 Ga0097621_100431091 Ga0097621_1004310912 277
173 3300006358 Ga0068871_100072985 Ga0068871_1000729853 277
174 3300006847 Ga0075431_100382269 Ga0075431_1003822692 277
175 3300009093 Ga0105240_10177417 Ga0105240_101774173 277
176 3300009093 Ga0105240_10240758 Ga0105240_102407583 277
177 3300009174 Ga0105241_10093312 Ga0105241_100933122 277
178 3300009177 Ga0105248_10203610 Ga0105248_102036102 277
179 3300009545 Ga0105237_10555928 Ga0105237_105559282 277
180 3300009553 Ga0105249_10099935 Ga0105249_100999354 277
181 3300009553 Ga0105249_10590853 Ga0105249_105908531 277
182 3300009553 Ga0105249_10664220 Ga0105249_106642201 277
183 3300013100 Ga0157373_10084684 Ga0157373_100846843 277
184 3300013105 Ga0157369_10009422 Ga0157369_100094223 277
185 3300013105 Ga0157369_10385992 Ga0157369_103859921 277
186 3300013296 Ga0157374_10039647 Ga0157374_100396473 277
187 3300013307 Ga0157372_10022832 Ga0157372_100228325 277
188 3300021358 Ga0213873_10016124 Ga0213873_100161242 277
189 3300021384 Ga0213876_10217639 Ga0213876_102176391 277
190 3300021388 Ga0213875_10002976 Ga0213875_100029765 277
191 3300021388 Ga0213875_10015038 Ga0213875_100150384 277
192 3300021388 Ga0213875_10058998 Ga0213875_100589982 277
193 3300025913 Ga0207695_10144066 Ga0207695_101440663 277
194 3300025913 Ga0207695_10174162 Ga0207695_101741623 277
195 3300025916 Ga0207663_10130349 Ga0207663_101303491 277
196 3300025919 Ga0207657_10066128 Ga0207657_100661283 277
197 3300025920 Ga0207649_10195908 Ga0207649_101959081 277
198 3300025932 Ga0207690_10129808 Ga0207690_101298082 277
199 3300025949 Ga0207667_10032812 Ga0207667_100328124 277
200 3300025949 Ga0207667_10049461 Ga0207667_100494614 277
201 3300025961 Ga0207712_10592182 Ga0207712_105921821 277
202 3300025986 Ga0207658_10145211 Ga0207658_101452112 277
203 3300028379 Ga0268266_10255577 Ga0268266_102555772 277
204 3300037853 Ga0436364_0234303 Ga0436364_0234303_483_1328 277
205 3300037853 Ga0436364_0566978 Ga0436364_0566978_464_1306 277
206 3300037853 Ga0436364_0628875 Ga0436364_0628875_189_1031 277
207 3300037853 Ga0436364_0683664 Ga0436364_0683664_1510_2361 277
208 3300037853 Ga0436364_1061374 Ga0436364_1061374_617_1459 277
209 3300037853 Ga0436364_1109545 Ga0436364_1109545_1862_2707 277
210 3300037853 Ga0436364_1274386 Ga0436364_1274386_368_1219 277
211 3300037853 Ga0436364_1340575 Ga0436364_1340575_5167_6012 277
212 3300037853 Ga0436364_1429601 Ga0436364_1429601_198_1040 277
213 3300039437 Ga0436365_0263529 Ga0436365_0263529_152_994 277
214 3300039450 Ga0436363_0266074 Ga0436363_0266074_1677_2522 277
215 3300039450 Ga0436363_0930765 Ga0436363_0930765_556_1398 277
216 3300039450 Ga0436363_1634836 Ga0436363_1634836_2340_3191 277
217 3300039453 Ga0436362_0198564 Ga0436362_0198564_302_1153 277
218 3300048905 Ga0496102_0345573 Ga0496102_0345573_383_1219 277
219 3300048918 Ga0496115_0009060 Ga0496115_0009060_4083_4919 277
220 3300050510 nmdc:mga06r32_41919_c1 nmdc:mga06r32_41919_c1_1577_2449 277
221 3300013296 Ga0157374_10784717 Ga0157374_107847172 278
222 3300021388 Ga0213875_10087804 Ga0213875_100878041 278
223 3300035725 Ga0373947_0177978 Ga0373947_0177978_511_1356 278
224 3300037853 Ga0436364_0966183 Ga0436364_0966183_11228_12082 278
225 3300039447 Ga0436361_1029109 Ga0436361_1029109_1550_2401 278
226 3300005455 Ga0070663_100142006 Ga0070663_1001420061 279
227 3300021388 Ga0213875_10000069 Ga0213875_1000006972 279
228 3300021388 Ga0213875_10023631 Ga0213875_100236314 279
229 3300021441 Ga0213871_10008234 Ga0213871_100082342 279
230 3300037853 Ga0436364_0278774 Ga0436364_0278774_102932_103780 279
231 3300037853 Ga0436364_1086888 Ga0436364_1086888_5850_6731 279
232 3300039438 Ga0436360_0823100 Ga0436360_0823100_2449_3306 279
233 3300039450 Ga0436363_0789905 Ga0436363_0789905_1501_2460 279
234 3300004799 Ga0058863_11910801 Ga0058863_119108012 280
235 3300004803 Ga0058862_12703119 Ga0058862_127031192 280
236 3300005435 Ga0070714_100473633 Ga0070714_1004736331 280
237 3300005548 Ga0070665_100029705 Ga0070665_1000297055 280
238 3300005577 Ga0068857_100460293 Ga0068857_1004602932 280
239 3300013105 Ga0157369_10122881 Ga0157369_101228812 280
240 3300020080 Ga0206350_10051832 Ga0206350_100518323 280
241 3300021361 Ga0213872_10020924 Ga0213872_100209241 280
242 3300021384 Ga0213876_10047881 Ga0213876_100478812 280
243 3300022467 Ga0224712_10017471 Ga0224712_100174712 280
244 3300039437 Ga0436365_0690405 Ga0436365_0690405_131_991 280
245 3300039447 Ga0436361_0139021 Ga0436361_0139021_50061_50921 280
246 3300039450 Ga0436363_1050950 Ga0436363_1050950_895_1791 280
247 3300039453 Ga0436362_0871827 Ga0436362_0871827_417_1277 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

85

309

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bvk-assembly1.cif.gz_B the crystal structure of o-glycoside cleaving beta-eliminase from a. tumefaciens atoge 0.8704 25 254
8bvk-assembly1.cif.gz_B the crystal structure of o-glycoside cleaving beta-eliminase from a. tumefaciens atoge 0.8592 25 254
8bvk-assembly1.cif.gz_A the crystal structure of o-glycoside cleaving beta-eliminase from a. tumefaciens atoge 0.8275 47 261
3l23-assembly1.cif.gz_A crystal structure of sugar phosphate isomerase/epimerase (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a resolution 0.8256 29 275
3obe-assembly1.cif.gz_A crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400) from parabacteroides distasonis atcc 8503 at 1.70 a resolution 0.8024 12 274
ID Description Score Start End Superfamily
3obeA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.814 30 274 3.20.20.150
af_P32134_16_258_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8023 29 257 3.20.20.150
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7813 29 275 3.20.20.150
3lmzA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7805 28 277 3.20.20.150
3l23A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7673 29 275 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A1Q6YDU6-F1-model_v4 Xylose isomerase 0.9901 29 276 GO:0016853
AF-A0A359LM66-F1-model_v4 Xylose isomerase 0.988 28 276 GO:0016853
AF-A0A3D1AXT5-F1-model_v4 Xylose isomerase 0.9854 128 278 GO:0016853
AF-A0A2V9JM15-F1-model_v4 Xylose isomerase 0.9847 77 278 GO:0016853
AF-A0A2V9SGQ6-F1-model_v4 Xylose isomerase 0.9723 36 171 GO:0016853

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pLDDT pTM Quality
91.19 0.87 High
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Predicted Structure (AlphaFold2)

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