F358701
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 247 | 140 | 494 | 211 |
Family's Representative Sequence
| Representative Sequence | 3300005327|Ga0070658_10000026|Ga0070658_10000026118 |
| Length | 224 |
| Sequence | MNRKLKNPPSGGKGVRPFIIGIAGGSGSGKTFFLKCFLEHFSTDEVCLVSQDDYYHPVADGMTAEENILYNFDLPETINNEQFVADINSLINNETIYKKEYTFNNPNLTPKILEIKPAPILIVEGLFIFHFREIAEKLDLKIFIEANEDVALSRRLKRDLEERGYSHDGVMYKWLNHVVPAYNEYLLPYRDECHQVIVNNTHQADDIIVVTAAISGELRKKVLV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300001904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 | Metagenome | Rhizosphere |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 5 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 6 | 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Metagenome | Rhizosphere |
| 7 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 8 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 9 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 10 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 11 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 12 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 13 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 14 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 15 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 18 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 23 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 24 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 26 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 30 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 31 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 32 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 33 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 35 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 36 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 56 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 58 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 61 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 88 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 89 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 90 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 91 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 92 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 93 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 94 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 95 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 96 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 97 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 98 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 99 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 100 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 101 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 102 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 103 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 104 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 105 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 106 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 107 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 108 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 130 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 131 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 132 | 3300053137 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere | Metagenome | Endosphere |
| 133 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 134 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 135 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 136 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 137 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 138 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 139 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 140 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.76 |
| Metatranscriptomes | 0 |
| Isolates | 3.24 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.26 |
| Nodule | 0 |
| Rhizoplane | 0.4 |
| Rhizosphere | 86.64 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.67 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10000026 | 3300005327 | Bacteria | 171716 |
| 2 | JGI24736J21556_1016672 | 3300001904 | Bacteria | 1167 |
| 3 | JGI24740J21852_10044247 | 3300001979 | Bacteria | 1322 |
| 4 | JGI24740J21852_10054683 | 3300001979 | Bacteria | 1126 |
| 5 | JGI24737J22298_10000092 | 3300001990 | Bacteria | 26419 |
| 6 | JGI24735J21928_10000006 | 3300002067 | Bacteria | 339303 |
| 7 | JGI24744J21845_10018323 | 3300002077 | Unclassified | 1388 |
| 8 | JGI25162J39368_1001400 | 3300002737 | Bacteria | 13179 |
| 9 | JGI25164J39214_1001307 | 3300002772 | Bacteria | 6283 |
| 10 | JGI25165J46597_1000855 | 3300003214 | Bacteria | 22032 |
| 11 | rootH1_10060985 | 3300003316 | Bacteria | 3154 |
| 12 | rootH1_10072982 | 3300003316 | Bacteria | 7424 |
| 13 | rootH2_10001334 | 3300003320 | Bacteria | 238709 |
| 14 | rootH2_10089634 | 3300003320 | Bacteria | 1783 |
| 15 | rootL2_10192676 | 3300003322 | Bacteria | 2277 |
| 16 | rootH1_10002772 | 3300003323 | Bacteria | 26216 |
| 17 | rootH1_10168445 | 3300003323 | Bacteria | 3043 |
| 18 | rootH1_10216274 | 3300003323 | Bacteria | 1710 |
| 19 | Ga0065714_10005409 | 3300005288 | Bacteria | 5102 |
| 20 | Ga0070658_10028102 | 3300005327 | Bacteria | 4515 |
| 21 | Ga0070658_10084727 | 3300005327 | Bacteria | 2606 |
| 22 | Ga0070676_10001812 | 3300005328 | Bacteria | 10867 |
| 23 | Ga0070680_100013176 | 3300005336 | Bacteria | 6437 |
| 24 | Ga0068868_100034503 | 3300005338 | Bacteria | 3906 |
| 25 | Ga0068868_100107000 | 3300005338 | Bacteria | 2269 |
| 26 | Ga0070660_100025924 | 3300005339 | Unclassified | 4361 |
| 27 | Ga0070660_100569975 | 3300005339 | Unclassified | 945 |
| 28 | Ga0070673_100010025 | 3300005364 | Bacteria | 6393 |
| 29 | Ga0070659_100241101 | 3300005366 | Bacteria | 1496 |
| 30 | Ga0070662_100000093 | 3300005457 | Bacteria | 49418 |
| 31 | Ga0070662_100092259 | 3300005457 | Bacteria | 2276 |
| 32 | Ga0070681_10024087 | 3300005458 | Bacteria | 6128 |
| 33 | Ga0068867_100000834 | 3300005459 | Bacteria | 20744 |
| 34 | Ga0070679_100259740 | 3300005530 | Bacteria | 1692 |
| 35 | Ga0068853_100046991 | 3300005539 | Bacteria | 3704 |
| 36 | Ga0068853_100077701 | 3300005539 | Bacteria | 2900 |
| 37 | Ga0070672_100244742 | 3300005543 | Unclassified | 1509 |
| 38 | Ga0070665_100000003 | 3300005548 | Bacteria | 811857 |
| 39 | Ga0068855_100004855 | 3300005563 | Bacteria | 16414 |
| 40 | Ga0068855_100015590 | 3300005563 | Bacteria | 9144 |
| 41 | Ga0068855_100049734 | 3300005563 | Bacteria | 4943 |
| 42 | Ga0068856_100001155 | 3300005614 | Bacteria | 27745 |
| 43 | Ga0068856_100016916 | 3300005614 | Bacteria | 7067 |
| 44 | Ga0068856_100116676 | 3300005614 | Bacteria | 2670 |
| 45 | Ga0068856_100332857 | 3300005614 | Bacteria | 1536 |
| 46 | Ga0068852_100005543 | 3300005616 | Bacteria | 9051 |
| 47 | Ga0068852_100419852 | 3300005616 | Bacteria | 1319 |
| 48 | Ga0068858_100044822 | 3300005842 | Bacteria | 4099 |
| 49 | Ga0068858_100466051 | 3300005842 | Bacteria | 1218 |
| 50 | Ga0075366_10000123 | 3300006195 | Bacteria | 32043 |
| 51 | Ga0097621_100002096 | 3300006237 | Bacteria | 13664 |
| 52 | Ga0068871_100000196 | 3300006358 | Bacteria | 41550 |
| 53 | Ga0068865_100000022 | 3300006881 | Bacteria | 102976 |
| 54 | Ga0105240_10003724 | 3300009093 | Bacteria | 23554 |
| 55 | Ga0105240_10006944 | 3300009093 | Bacteria | 16540 |
| 56 | Ga0105240_10026711 | 3300009093 | Bacteria | 7572 |
| 57 | Ga0105240_10252849 | 3300009093 | Bacteria | 2037 |
| 58 | Ga0105240_10300821 | 3300009093 | Bacteria | 1835 |
| 59 | Ga0105240_10479490 | 3300009093 | Bacteria | 1387 |
| 60 | Ga0105240_10506376 | 3300009093 | Bacteria | 1342 |
| 61 | Ga0105240_10857928 | 3300009093 | Bacteria | 979 |
| 62 | Ga0105240_11084362 | 3300009093 | Bacteria | 853 |
| 63 | Ga0105245_10858890 | 3300009098 | Bacteria | 948 |
| 64 | Ga0105241_10000238 | 3300009174 | Bacteria | 41677 |
| 65 | Ga0105242_10165656 | 3300009176 | Unclassified | 1939 |
| 66 | Ga0105237_10001823 | 3300009545 | Bacteria | 27486 |
| 67 | Ga0105237_10006067 | 3300009545 | Bacteria | 13516 |
| 68 | Ga0105237_10018370 | 3300009545 | Bacteria | 7236 |
| 69 | Ga0105237_10018921 | 3300009545 | Bacteria | 7119 |
| 70 | Ga0105237_10054779 | 3300009545 | Bacteria | 3996 |
| 71 | Ga0105238_10008082 | 3300009551 | Bacteria | 10522 |
| 72 | Ga0105238_10653183 | 3300009551 | Bacteria | 1062 |
| 73 | Ga0105239_10000005 | 3300010375 | Bacteria | 496066 |
| 74 | Ga0105239_10000013 | 3300010375 | Bacteria | 327371 |
| 75 | Ga0105239_10004534 | 3300010375 | Bacteria | 16549 |
| 76 | Ga0105239_10004850 | 3300010375 | Bacteria | 15914 |
| 77 | Ga0105239_10022560 | 3300010375 | Bacteria | 6941 |
| 78 | Ga0105239_10043744 | 3300010375 | Bacteria | 4910 |
| 79 | Ga0105239_10073693 | 3300010375 | Bacteria | 3753 |
| 80 | Ga0105239_10156032 | 3300010375 | Bacteria | 2549 |
| 81 | Ga0105239_10290147 | 3300010375 | Bacteria | 1842 |
| 82 | Ga0105246_10180333 | 3300011119 | Bacteria | 1626 |
| 83 | Ga0105246_10348689 | 3300011119 | Bacteria | 1212 |
| 84 | Ga0157373_10002419 | 3300013100 | Bacteria | 14191 |
| 85 | Ga0157371_10007776 | 3300013102 | Bacteria | 8616 |
| 86 | Ga0157371_10128732 | 3300013102 | Bacteria | 1801 |
| 87 | Ga0157371_10178804 | 3300013102 | Bacteria | 1517 |
| 88 | Ga0157371_10335814 | 3300013102 | Bacteria | 1098 |
| 89 | Ga0157370_10054544 | 3300013104 | Bacteria | 3810 |
| 90 | Ga0157370_10060281 | 3300013104 | Bacteria | 3603 |
| 91 | Ga0157369_10000039 | 3300013105 | Bacteria | 188947 |
| 92 | Ga0157369_10063369 | 3300013105 | Bacteria | 3983 |
| 93 | Ga0157369_10169051 | 3300013105 | Bacteria | 2304 |
| 94 | Ga0157369_10656290 | 3300013105 | Bacteria | 1082 |
| 95 | Ga0157374_10000456 | 3300013296 | Bacteria | 37266 |
| 96 | Ga0157374_10001622 | 3300013296 | Bacteria | 18852 |
| 97 | Ga0157374_10003352 | 3300013296 | Bacteria | 13449 |
| 98 | Ga0157374_10303592 | 3300013296 | Unclassified | 1579 |
| 99 | Ga0157378_10003085 | 3300013297 | Bacteria | 14806 |
| 100 | Ga0157378_10012682 | 3300013297 | Bacteria | 7374 |
| 101 | Ga0157378_10045121 | 3300013297 | Bacteria | 3916 |
| 102 | Ga0163162_10000024 | 3300013306 | Bacteria | 188515 |
| 103 | Ga0163162_10000882 | 3300013306 | Bacteria | 27892 |
| 104 | Ga0163162_10295996 | 3300013306 | Bacteria | 1750 |
| 105 | Ga0157372_10000001 | 3300013307 | Bacteria | 791349 |
| 106 | Ga0157372_10001070 | 3300013307 | Bacteria | 29934 |
| 107 | Ga0157372_10026771 | 3300013307 | Bacteria | 6277 |
| 108 | Ga0157372_10065184 | 3300013307 | Bacteria | 4089 |
| 109 | Ga0157372_10891678 | 3300013307 | Bacteria | 1032 |
| 110 | Ga0157372_11017215 | 3300013307 | Bacteria | 960 |
| 111 | Ga0157375_10016319 | 3300013308 | Bacteria | 6667 |
| 112 | Ga0157375_10208205 | 3300013308 | Unclassified | 2113 |
| 113 | Ga0157377_10010916 | 3300014745 | Bacteria | 4514 |
| 114 | Ga0157376_10706575 | 3300014969 | Bacteria | 1014 |
| 115 | Ga0182006_1004469 | 3300015261 | Bacteria | 6885 |
| 116 | Ga0163161_10000394 | 3300017792 | Bacteria | 36483 |
| 117 | Ga0163161_10009053 | 3300017792 | Bacteria | 6887 |
| 118 | Ga0163161_10185443 | 3300017792 | Bacteria | 1597 |
| 119 | Ga0213872_10009172 | 3300021361 | Bacteria | 4756 |
| 120 | Ga0207427_100106 | 3300025231 | Bacteria | 117041 |
| 121 | Ga0209437_100077 | 3300025233 | Bacteria | 286656 |
| 122 | Ga0209437_100226 | 3300025233 | Bacteria | 100303 |
| 123 | Ga0209026_1000963 | 3300025250 | Bacteria | 14377 |
| 124 | Ga0209233_1000089 | 3300025261 | Bacteria | 316381 |
| 125 | Ga0207647_10000354 | 3300025904 | Bacteria | 37206 |
| 126 | Ga0207647_10262371 | 3300025904 | Bacteria | 989 |
| 127 | Ga0207645_10000500 | 3300025907 | Bacteria | 32432 |
| 128 | Ga0207705_10000040 | 3300025909 | Bacteria | 185735 |
| 129 | Ga0207705_10039334 | 3300025909 | Bacteria | 3389 |
| 130 | Ga0207705_10291562 | 3300025909 | Unclassified | 1250 |
| 131 | Ga0207705_10540721 | 3300025909 | Bacteria | 906 |
| 132 | Ga0207654_10004895 | 3300025911 | Bacteria | 6777 |
| 133 | Ga0207654_10212067 | 3300025911 | Unclassified | 1280 |
| 134 | Ga0207654_10221953 | 3300025911 | Bacteria | 1254 |
| 135 | Ga0207707_10029445 | 3300025912 | Bacteria | 4800 |
| 136 | Ga0207695_10009387 | 3300025913 | Bacteria | 12100 |
| 137 | Ga0207695_10012640 | 3300025913 | Bacteria | 10113 |
| 138 | Ga0207695_10049264 | 3300025913 | Bacteria | 4443 |
| 139 | Ga0207695_10315246 | 3300025913 | Bacteria | 1454 |
| 140 | Ga0207695_10341655 | 3300025913 | Bacteria | 1384 |
| 141 | Ga0207695_10383279 | 3300025913 | Bacteria | 1291 |
| 142 | Ga0207671_10003333 | 3300025914 | Bacteria | 16132 |
| 143 | Ga0207671_10004426 | 3300025914 | Bacteria | 13457 |
| 144 | Ga0207671_10005736 | 3300025914 | Bacteria | 11317 |
| 145 | Ga0207671_10009466 | 3300025914 | Bacteria | 8141 |
| 146 | Ga0207671_10031117 | 3300025914 | Bacteria | 3979 |
| 147 | Ga0207660_10026732 | 3300025917 | Bacteria | 3932 |
| 148 | Ga0207657_10033865 | 3300025919 | Unclassified | 4600 |
| 149 | Ga0207657_10128167 | 3300025919 | Bacteria | 2082 |
| 150 | Ga0207652_10003659 | 3300025921 | Bacteria | 12652 |
| 151 | Ga0207694_10021079 | 3300025924 | Bacteria | 4935 |
| 152 | Ga0207694_10902281 | 3300025924 | Bacteria | 747 |
| 153 | Ga0207644_10004161 | 3300025931 | Bacteria | 9381 |
| 154 | Ga0207690_10206258 | 3300025932 | Bacteria | 1496 |
| 155 | Ga0207706_10000442 | 3300025933 | Bacteria | 44334 |
| 156 | Ga0207704_10000011 | 3300025938 | Bacteria | 180140 |
| 157 | Ga0207691_10392921 | 3300025940 | Unclassified | 1183 |
| 158 | Ga0207667_10000020 | 3300025949 | Bacteria | 374770 |
| 159 | Ga0207667_10043970 | 3300025949 | Bacteria | 4737 |
| 160 | Ga0207667_10045470 | 3300025949 | Bacteria | 4650 |
| 161 | Ga0207667_10045761 | 3300025949 | Bacteria | 4634 |
| 162 | Ga0207667_10334505 | 3300025949 | Bacteria | 1546 |
| 163 | Ga0207651_10003816 | 3300025960 | Bacteria | 7468 |
| 164 | Ga0207677_10019037 | 3300026023 | Unclassified | 4136 |
| 165 | Ga0207677_10032396 | 3300026023 | Unclassified | 3360 |
| 166 | Ga0207639_10003710 | 3300026041 | Bacteria | 10275 |
| 167 | Ga0207639_10010901 | 3300026041 | Bacteria | 6303 |
| 168 | Ga0207702_10001532 | 3300026078 | Bacteria | 22854 |
| 169 | Ga0207702_10117972 | 3300026078 | Bacteria | 2370 |
| 170 | Ga0207641_10961005 | 3300026088 | Bacteria | 850 |
| 171 | Ga0207648_10001059 | 3300026089 | Bacteria | 30821 |
| 172 | Ga0207698_10004269 | 3300026142 | Bacteria | 8698 |
| 173 | Ga0268266_10000380 | 3300028379 | Bacteria | 67791 |
| 174 | Ga0307517_10001632 | 3300028786 | Bacteria | 37097 |
| 175 | Ga0307515_10000280 | 3300028794 | Bacteria | 125330 |
| 176 | Ga0307515_10022378 | 3300028794 | Bacteria | 11140 |
| 177 | Ga0307515_10109673 | 3300028794 | Bacteria | 3239 |
| 178 | Ga0307509_10087070 | 3300031507 | Bacteria | 3210 |
| 179 | Ga0307408_100002024 | 3300031548 | Bacteria | 14624 |
| 180 | Ga0307408_100018198 | 3300031548 | Bacteria | 4715 |
| 181 | Ga0307408_100018484 | 3300031548 | Bacteria | 4679 |
| 182 | Ga0307412_10002120 | 3300031911 | Bacteria | 11000 |
| 183 | Ga0307416_100233936 | 3300032002 | Bacteria | 1774 |
| 184 | Ga0307507_10000052 | 3300033179 | Bacteria | 168303 |
| 185 | Ga0307510_10008290 | 3300033180 | Bacteria | 12386 |
| 186 | Ga0395899_0000717 | 3300037312 | Bacteria | 33215 |
| 187 | Ga0395899_0000735 | 3300037312 | Bacteria | 32677 |
| 188 | Ga0395899_0007644 | 3300037312 | Bacteria | 8337 |
| 189 | Ga0395900_0000014 | 3300037418 | Bacteria | 386513 |
| 190 | Ga0395900_0052327 | 3300037418 | Bacteria | 4204 |
| 191 | Ga0395898_0024455 | 3300037466 | Bacteria | 6093 |
| 192 | Ga0395905_0000037 | 3300037471 | Bacteria | 261808 |
| 193 | Ga0395905_0001611 | 3300037471 | Bacteria | 26826 |
| 194 | Ga0395901_0000219 | 3300038443 | Bacteria | 71884 |
| 195 | Ga0395901_1321204 | 3300038443 | Bacteria | 682 |
| 196 | Ga0436361_0351371 | 3300039447 | Bacteria | 6023 |
| 197 | Ga0439445_0093992 | 3300042004 | Bacteria | 846 |
| 198 | Ga0439448_0018527 | 3300042005 | Bacteria | 2135 |
| 199 | Ga0453683_0046535 | 3300044673 | Bacteria | 2720 |
| 200 | Ga0466966_0022793 | 3300044684 | Bacteria | 4104 |
| 201 | Ga0453684_0148032 | 3300044712 | Bacteria | 2794 |
| 202 | Ga0466959_0103053 | 3300045049 | Bacteria | 2042 |
| 203 | Ga0451576_0062552 | 3300045051 | Bacteria | 3880 |
| 204 | Ga0451576_0867539 | 3300045051 | Bacteria | 947 |
| 205 | Ga0451576_1383394 | 3300045051 | Bacteria | 732 |
| 206 | Ga0495592_0196944 | 3300046454 | Bacteria | 1362 |
| 207 | Ga0495585_0000806 | 3300046492 | Bacteria | 27323 |
| 208 | Ga0495596_0050101 | 3300046500 | Bacteria | 1637 |
| 209 | Ga0495583_0113856 | 3300046506 | Bacteria | 1144 |
| 210 | Ga0495630_0398037 | 3300046517 | Unclassified | 1055 |
| 211 | Ga0495631_0009565 | 3300046518 | Bacteria | 4838 |
| 212 | Ga0495648_0008887 | 3300046524 | Bacteria | 7853 |
| 213 | Ga0495652_0023951 | 3300046529 | Bacteria | 5408 |
| 214 | Ga0495652_0436811 | 3300046529 | Bacteria | 919 |
| 215 | Ga0495654_0082356 | 3300046530 | Bacteria | 1506 |
| 216 | Ga0495633_0000029 | 3300046558 | Bacteria | 200381 |
| 217 | Ga0495668_0000021 | 3300046616 | Bacteria | 381308 |
| 218 | Ga0495668_0213029 | 3300046616 | Bacteria | 1058 |
| 219 | Ga0495625_0000601 | 3300046660 | Bacteria | 52410 |
| 220 | Ga0495625_0021222 | 3300046660 | Bacteria | 5004 |
| 221 | Ga0495625_0194665 | 3300046660 | Bacteria | 1341 |
| 222 | Ga0495661_0104563 | 3300046665 | Bacteria | 1587 |
| 223 | Ga0495649_0202611 | 3300046694 | Bacteria | 1030 |
| 224 | Ga0495600_0241730 | 3300046809 | Bacteria | 1150 |
| 225 | Ga0495687_001685 | 3300047443 | Bacteria | 19718 |
| 226 | Ga0495687_028649 | 3300047443 | Bacteria | 2587 |
| 227 | Ga0495677_0127162 | 3300047445 | Bacteria | 974 |
| 228 | Ga0495681_0065091 | 3300047470 | Bacteria | 1668 |
| 229 | Ga0495686_0000194 | 3300047472 | Bacteria | 113904 |
| 230 | Ga0495686_0018337 | 3300047472 | Bacteria | 4699 |
| 231 | Ga0495686_0032372 | 3300047472 | Bacteria | 3384 |
| 232 | Ga0495686_0124910 | 3300047472 | Bacteria | 1530 |
| 233 | Ga0495678_001759 | 3300049459 | Bacteria | 16052 |
| 234 | Ga0495682_0105417 | 3300049460 | Bacteria | 1011 |
| 235 | Ga0500635_0001803 | 3300053080 | Bacteria | 5223 |
| 236 | Ga0500608_000637 | 3300053122 | Bacteria | 12928 |
| 237 | Ga0500608_054800 | 3300053122 | Bacteria | 1913 |
| 238 | Ga0500618_000266 | 3300053125 | Bacteria | 40517 |
| 239 | Ga0500561_0068475 | 3300053137 | Bacteria | 1010 |
| 240 | 2599476838 | 2599185184 | Bacteria | 6430550 |
| 241 | 2852623319 | 2852623160 | Bacteria | 4376875 |
| 242 | 2884937803 | 2884933994 | Bacteria | 4535041 |
| 243 | 2919438790 | 2919437846 | Bacteria | 6199444 |
| 244 | 2928078748 | 2928078545 | Bacteria | 6534839 |
| 245 | 2928151575 | 2928147474 | Bacteria | 6512076 |
| 246 | 2932084199 | 2932082852 | Bacteria | 6563563 |
| 247 | 2977233671 | 2977232053 | Bacteria | 5485925 |
| 248 | Ga0070658_10000026 | |||
| 249 | JGI24736J21556_1016672 | |||
| 250 | JGI24740J21852_10044247 | |||
| 251 | JGI24740J21852_10054683 | |||
| 252 | JGI24737J22298_10000092 | |||
| 253 | JGI24735J21928_10000006 | |||
| 254 | JGI24744J21845_10018323 | |||
| 255 | JGI25162J39368_1001400 | |||
| 256 | JGI25164J39214_1001307 | |||
| 257 | JGI25165J46597_1000855 | |||
| 258 | rootH1_10060985 | |||
| 259 | rootH1_10072982 | |||
| 260 | rootH2_10001334 | |||
| 261 | rootH2_10089634 | |||
| 262 | rootL2_10192676 | |||
| 263 | rootH1_10002772 | |||
| 264 | rootH1_10168445 | |||
| 265 | rootH1_10216274 | |||
| 266 | Ga0065714_10005409 | |||
| 267 | Ga0070658_10028102 | |||
| 268 | Ga0070658_10084727 | |||
| 269 | Ga0070676_10001812 | |||
| 270 | Ga0070680_100013176 | |||
| 271 | Ga0068868_100034503 | |||
| 272 | Ga0068868_100107000 | |||
| 273 | Ga0070660_100025924 | |||
| 274 | Ga0070660_100569975 | |||
| 275 | Ga0070673_100010025 | |||
| 276 | Ga0070659_100241101 | |||
| 277 | Ga0070662_100000093 | |||
| 278 | Ga0070662_100092259 | |||
| 279 | Ga0070681_10024087 | |||
| 280 | Ga0068867_100000834 | |||
| 281 | Ga0070679_100259740 | |||
| 282 | Ga0068853_100046991 | |||
| 283 | Ga0068853_100077701 | |||
| 284 | Ga0070672_100244742 | |||
| 285 | Ga0070665_100000003 | |||
| 286 | Ga0068855_100004855 | |||
| 287 | Ga0068855_100015590 | |||
| 288 | Ga0068855_100049734 | |||
| 289 | Ga0068856_100001155 | |||
| 290 | Ga0068856_100016916 | |||
| 291 | Ga0068856_100116676 | |||
| 292 | Ga0068856_100332857 | |||
| 293 | Ga0068852_100005543 | |||
| 294 | Ga0068852_100419852 | |||
| 295 | Ga0068858_100044822 | |||
| 296 | Ga0068858_100466051 | |||
| 297 | Ga0075366_10000123 | |||
| 298 | Ga0097621_100002096 | |||
| 299 | Ga0068871_100000196 | |||
| 300 | Ga0068865_100000022 | |||
| 301 | Ga0105240_10003724 | |||
| 302 | Ga0105240_10006944 | |||
| 303 | Ga0105240_10026711 | |||
| 304 | Ga0105240_10252849 | |||
| 305 | Ga0105240_10300821 | |||
| 306 | Ga0105240_10479490 | |||
| 307 | Ga0105240_10506376 | |||
| 308 | Ga0105240_10857928 | |||
| 309 | Ga0105240_11084362 | |||
| 310 | Ga0105245_10858890 | |||
| 311 | Ga0105241_10000238 | |||
| 312 | Ga0105242_10165656 | |||
| 313 | Ga0105237_10001823 | |||
| 314 | Ga0105237_10006067 | |||
| 315 | Ga0105237_10018370 | |||
| 316 | Ga0105237_10018921 | |||
| 317 | Ga0105237_10054779 | |||
| 318 | Ga0105238_10008082 | |||
| 319 | Ga0105238_10653183 | |||
| 320 | Ga0105239_10000005 | |||
| 321 | Ga0105239_10000013 | |||
| 322 | Ga0105239_10004534 | |||
| 323 | Ga0105239_10004850 | |||
| 324 | Ga0105239_10022560 | |||
| 325 | Ga0105239_10043744 | |||
| 326 | Ga0105239_10073693 | |||
| 327 | Ga0105239_10156032 | |||
| 328 | Ga0105239_10290147 | |||
| 329 | Ga0105246_10180333 | |||
| 330 | Ga0105246_10348689 | |||
| 331 | Ga0157373_10002419 | |||
| 332 | Ga0157371_10007776 | |||
| 333 | Ga0157371_10128732 | |||
| 334 | Ga0157371_10178804 | |||
| 335 | Ga0157371_10335814 | |||
| 336 | Ga0157370_10054544 | |||
| 337 | Ga0157370_10060281 | |||
| 338 | Ga0157369_10000039 | |||
| 339 | Ga0157369_10063369 | |||
| 340 | Ga0157369_10169051 | |||
| 341 | Ga0157369_10656290 | |||
| 342 | Ga0157374_10000456 | |||
| 343 | Ga0157374_10001622 | |||
| 344 | Ga0157374_10003352 | |||
| 345 | Ga0157374_10303592 | |||
| 346 | Ga0157378_10003085 | |||
| 347 | Ga0157378_10012682 | |||
| 348 | Ga0157378_10045121 | |||
| 349 | Ga0163162_10000024 | |||
| 350 | Ga0163162_10000882 | |||
| 351 | Ga0163162_10295996 | |||
| 352 | Ga0157372_10000001 | |||
| 353 | Ga0157372_10001070 | |||
| 354 | Ga0157372_10026771 | |||
| 355 | Ga0157372_10065184 | |||
| 356 | Ga0157372_10891678 | |||
| 357 | Ga0157372_11017215 | |||
| 358 | Ga0157375_10016319 | |||
| 359 | Ga0157375_10208205 | |||
| 360 | Ga0157377_10010916 | |||
| 361 | Ga0157376_10706575 | |||
| 362 | Ga0182006_1004469 | |||
| 363 | Ga0163161_10000394 | |||
| 364 | Ga0163161_10009053 | |||
| 365 | Ga0163161_10185443 | |||
| 366 | Ga0213872_10009172 | |||
| 367 | Ga0207427_100106 | |||
| 368 | Ga0209437_100077 | |||
| 369 | Ga0209437_100226 | |||
| 370 | Ga0209026_1000963 | |||
| 371 | Ga0209233_1000089 | |||
| 372 | Ga0207647_10000354 | |||
| 373 | Ga0207647_10262371 | |||
| 374 | Ga0207645_10000500 | |||
| 375 | Ga0207705_10000040 | |||
| 376 | Ga0207705_10039334 | |||
| 377 | Ga0207705_10291562 | |||
| 378 | Ga0207705_10540721 | |||
| 379 | Ga0207654_10004895 | |||
| 380 | Ga0207654_10212067 | |||
| 381 | Ga0207654_10221953 | |||
| 382 | Ga0207707_10029445 | |||
| 383 | Ga0207695_10009387 | |||
| 384 | Ga0207695_10012640 | |||
| 385 | Ga0207695_10049264 | |||
| 386 | Ga0207695_10315246 | |||
| 387 | Ga0207695_10341655 | |||
| 388 | Ga0207695_10383279 | |||
| 389 | Ga0207671_10003333 | |||
| 390 | Ga0207671_10004426 | |||
| 391 | Ga0207671_10005736 | |||
| 392 | Ga0207671_10009466 | |||
| 393 | Ga0207671_10031117 | |||
| 394 | Ga0207660_10026732 | |||
| 395 | Ga0207657_10033865 | |||
| 396 | Ga0207657_10128167 | |||
| 397 | Ga0207652_10003659 | |||
| 398 | Ga0207694_10021079 | |||
| 399 | Ga0207694_10902281 | |||
| 400 | Ga0207644_10004161 | |||
| 401 | Ga0207690_10206258 | |||
| 402 | Ga0207706_10000442 | |||
| 403 | Ga0207704_10000011 | |||
| 404 | Ga0207691_10392921 | |||
| 405 | Ga0207667_10000020 | |||
| 406 | Ga0207667_10043970 | |||
| 407 | Ga0207667_10045470 | |||
| 408 | Ga0207667_10045761 | |||
| 409 | Ga0207667_10334505 | |||
| 410 | Ga0207651_10003816 | |||
| 411 | Ga0207677_10019037 | |||
| 412 | Ga0207677_10032396 | |||
| 413 | Ga0207639_10003710 | |||
| 414 | Ga0207639_10010901 | |||
| 415 | Ga0207702_10001532 | |||
| 416 | Ga0207702_10117972 | |||
| 417 | Ga0207641_10961005 | |||
| 418 | Ga0207648_10001059 | |||
| 419 | Ga0207698_10004269 | |||
| 420 | Ga0268266_10000380 | |||
| 421 | Ga0307517_10001632 | |||
| 422 | Ga0307515_10000280 | |||
| 423 | Ga0307515_10022378 | |||
| 424 | Ga0307515_10109673 | |||
| 425 | Ga0307509_10087070 | |||
| 426 | Ga0307408_100002024 | |||
| 427 | Ga0307408_100018198 | |||
| 428 | Ga0307408_100018484 | |||
| 429 | Ga0307412_10002120 | |||
| 430 | Ga0307416_100233936 | |||
| 431 | Ga0307507_10000052 | |||
| 432 | Ga0307510_10008290 | |||
| 433 | Ga0395899_0000717 | |||
| 434 | Ga0395899_0000735 | |||
| 435 | Ga0395899_0007644 | |||
| 436 | Ga0395900_0000014 | |||
| 437 | Ga0395900_0052327 | |||
| 438 | Ga0395898_0024455 | |||
| 439 | Ga0395905_0000037 | |||
| 440 | Ga0395905_0001611 | |||
| 441 | Ga0395901_0000219 | |||
| 442 | Ga0395901_1321204 | |||
| 443 | Ga0436361_0351371 | |||
| 444 | Ga0439445_0093992 | |||
| 445 | Ga0439448_0018527 | |||
| 446 | Ga0453683_0046535 | |||
| 447 | Ga0466966_0022793 | |||
| 448 | Ga0453684_0148032 | |||
| 449 | Ga0466959_0103053 | |||
| 450 | Ga0451576_0062552 | |||
| 451 | Ga0451576_0867539 | |||
| 452 | Ga0451576_1383394 | |||
| 453 | Ga0495592_0196944 | |||
| 454 | Ga0495585_0000806 | |||
| 455 | Ga0495596_0050101 | |||
| 456 | Ga0495583_0113856 | |||
| 457 | Ga0495630_0398037 | |||
| 458 | Ga0495631_0009565 | |||
| 459 | Ga0495648_0008887 | |||
| 460 | Ga0495652_0023951 | |||
| 461 | Ga0495652_0436811 | |||
| 462 | Ga0495654_0082356 | |||
| 463 | Ga0495633_0000029 | |||
| 464 | Ga0495668_0000021 | |||
| 465 | Ga0495668_0213029 | |||
| 466 | Ga0495625_0000601 | |||
| 467 | Ga0495625_0021222 | |||
| 468 | Ga0495625_0194665 | |||
| 469 | Ga0495661_0104563 | |||
| 470 | Ga0495649_0202611 | |||
| 471 | Ga0495600_0241730 | |||
| 472 | Ga0495687_001685 | |||
| 473 | Ga0495687_028649 | |||
| 474 | Ga0495677_0127162 | |||
| 475 | Ga0495681_0065091 | |||
| 476 | Ga0495686_0000194 | |||
| 477 | Ga0495686_0018337 | |||
| 478 | Ga0495686_0032372 | |||
| 479 | Ga0495686_0124910 | |||
| 480 | Ga0495678_001759 | |||
| 481 | Ga0495682_0105417 | |||
| 482 | Ga0500635_0001803 | |||
| 483 | Ga0500608_000637 | |||
| 484 | Ga0500608_054800 | |||
| 485 | Ga0500618_000266 | |||
| 486 | Ga0500561_0068475 | |||
| 487 | 2599476838 | |||
| 488 | 2852623319 | |||
| 489 | 2884937803 | |||
| 490 | 2919438790 | |||
| 491 | 2928078748 | |||
| 492 | 2928151575 | |||
| 493 | 2932084199 | |||
| 494 | 2977233671 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6n55-assembly2.cif.gz_G | crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine | 0.879 | 11 | 214 |
| 3w34-assembly1.cif.gz_A | ternary complex of thermus thermophilus hb8 uridine-cytidine kinase with substrates | 0.878 | 10 | 215 |
| 3w8r-assembly1.cif.gz_B | mutant structure of thermus thermophilus hb8 uridine-cytidine kinase | 0.8736 | 10 | 215 |
| 6n55-assembly2.cif.gz_B | crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine | 0.8656 | 10 | 213 |
| 6n55-assembly1.cif.gz_H | crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine | 0.8651 | 10 | 213 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0A8F4_7_213_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8713 | 10 | 210 | 3.40.50.300 |
| af_Q2FXW6_1_207_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8686 | 10 | 210 | 3.40.50.300 |
| af_Q54R62_51_230_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8662 | 12 | 196 | 3.40.50.300 |
| af_I1JJM2_43_250_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8649 | 7 | 213 | 3.40.50.300 |
| af_Q5ANN6_93_307_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.859 | 10 | 215 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A520D6H4-F1-model_v4 | Uridine kinase | 0.9565 | 64 | 215 |
GO:0005524
GO:0016301 |
| AF-A0A7W8ZP20-F1-model_v4 | Uridine kinase (EC 2.7.1.48) | 0.9555 | 6 | 216 |
GO:0004849
GO:0005524 |
| AF-A0A381QJE9-F1-model_v4 | Phosphoribulokinase/uridine kinase domain-containing protein | 0.9438 | 68 | 214 |
GO:0005524
GO:0016301 |
| AF-A0A7T9I6J4-F1-model_v4 | deleted | 0.9374 | 10 | 216 |
|
| AF-A0A7K3WK23-F1-model_v4 | AAA family ATPase | 0.9344 | 4 | 214 |
GO:0005524
GO:0016301 |