F358424
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 246 | 171 | 492 | 332 |
Family's Representative Sequence
| Representative Sequence | 3300046472|Ga0495580_0008511|Ga0495580_0008511_580_1770 |
| Length | 367 |
| Sequence | LVVGRNRWCKRPGFGERRTTDTEKKMSAEEKHERKPQRARVDDKFKIFSGTANPALADEICAFLGVTRGQASIMRFADGEAYVQIQENVRGADVFVVQPTCRACQPGKRTVSVDEHLMELLLMIDALTRASARRITAVVPYYGYGRQDRKDKPRAPISAKLVADLLTTAGAHRALLIDPHAPQIQGFFNIPVDPLFASPVLVDHFKKLHLPNLTVVSPDAGGVERARFFAKKVDAALAIVDKRRVEANVAEVMNVIGDVKGRTCLVIDDLIDTAGTLVKTAAALKENGATEVYACCSHPVLSGPAVENIMKSCIKEVVVTNTIPLAPDALAARTECGGKISVLSIAGLIGRAIQSIHEETSVSRLFS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 5 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 6 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 27 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 30 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 31 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 32 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 33 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 34 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 44 | 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Metagenome | Rhizosphere |
| 45 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 67 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 68 | 3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 69 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 70 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 71 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 72 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 73 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 74 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 75 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 76 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 77 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 78 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 79 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 80 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 81 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 82 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 83 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 84 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 85 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 86 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 87 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 88 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 89 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 90 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 91 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 92 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 93 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 94 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 95 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 96 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 97 | 3300033527 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 98 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 99 | 3300033547 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 | Metagenome | Unclassified |
| 100 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 101 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 102 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 103 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 104 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 105 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 106 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 107 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 108 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 109 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 110 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 111 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 112 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 113 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 114 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 115 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 116 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 117 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 118 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 119 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 120 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 121 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 122 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 123 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 137 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 138 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 139 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 140 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 141 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 142 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 143 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 144 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 145 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 146 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 147 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 148 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 149 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 150 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 151 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 152 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 154 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 155 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 156 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 157 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 158 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 159 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 160 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 161 | 2744054657 | Brevibacillus sp. SKDU10 | Isolate | Unclassified |
| 162 | 2816332336 | Brevibacillus laterosporus ZQ2 | Isolate | Unclassified |
| 163 | 2857460504 | Brevibacillus sp. R-74223 | Isolate | Unclassified |
| 164 | 2857465823 | Brevibacillus sp. R-74266 | Isolate | Unclassified |
| 165 | 2857472729 | Cohnella sp. R-74144 | Isolate | Unclassified |
| 166 | 2857591370 | Brevibacillus sp. R-71934 | Isolate | Unclassified |
| 167 | 2898907183 | Brevibacillus sp. SYP-B805 | Isolate | Rhizosphere |
| 168 | 2929297113 | Heliophilum fasciatum MTM | Isolate | Rhizosphere |
| 169 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 170 | 2977254563 | Bacillus sp. SORGH_AS 510 | Isolate | Unclassified |
| 171 | 3001892409 | Neobacillus rhizophilus FJAT-49825 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.28 |
| Metatranscriptomes | 3.25 |
| Isolates | 4.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.41 |
| Nodule | 0 |
| Rhizoplane | 6.91 |
| Rhizosphere | 84.15 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.41 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495580_0008511 | 3300046472 | Bacteria | 8156 |
| 2 | JGI24751J29686_10012134 | 3300002459 | Bacteria | 1776 |
| 3 | Ga0070658_10169553 | 3300005327 | Bacteria | 1833 |
| 4 | Ga0068869_100156033 | 3300005334 | Bacteria | 1773 |
| 5 | Ga0068868_100163504 | 3300005338 | Bacteria | 1840 |
| 6 | Ga0070689_100032802 | 3300005340 | Bacteria | 3952 |
| 7 | Ga0070675_100126021 | 3300005354 | Bacteria | 2179 |
| 8 | Ga0070667_100189256 | 3300005367 | Bacteria | 1823 |
| 9 | Ga0070714_100010217 | 3300005435 | Bacteria | 7410 |
| 10 | Ga0070714_100181241 | 3300005435 | Bacteria | 1917 |
| 11 | Ga0070714_100189801 | 3300005435 | Bacteria | 1874 |
| 12 | Ga0070713_100024512 | 3300005436 | Bacteria | 4700 |
| 13 | Ga0070713_100028018 | 3300005436 | Bacteria | 4444 |
| 14 | Ga0070710_10117304 | 3300005437 | Bacteria | 1606 |
| 15 | Ga0070701_10071365 | 3300005438 | Bacteria | 1857 |
| 16 | Ga0070711_100049047 | 3300005439 | Bacteria | 2890 |
| 17 | Ga0070708_100015048 | 3300005445 | Bacteria | 6382 |
| 18 | Ga0070708_100216499 | 3300005445 | Bacteria | 1795 |
| 19 | Ga0070681_10202139 | 3300005458 | Bacteria | 1905 |
| 20 | Ga0070706_100000935 | 3300005467 | Bacteria | 31937 |
| 21 | Ga0070706_100006968 | 3300005467 | Bacteria | 10660 |
| 22 | Ga0070706_100107621 | 3300005467 | Bacteria | 2594 |
| 23 | Ga0070707_100002157 | 3300005468 | Bacteria | 18841 |
| 24 | Ga0070707_100003649 | 3300005468 | Bacteria | 14508 |
| 25 | Ga0070707_100217710 | 3300005468 | Bacteria | 1861 |
| 26 | Ga0070707_100392029 | 3300005468 | Bacteria | 1349 |
| 27 | Ga0070698_100002044 | 3300005471 | Bacteria | 22425 |
| 28 | Ga0070699_100002908 | 3300005518 | Bacteria | 15244 |
| 29 | Ga0070699_100033580 | 3300005518 | Bacteria | 4432 |
| 30 | Ga0070699_100067910 | 3300005518 | Bacteria | 3096 |
| 31 | Ga0070699_100081777 | 3300005518 | Bacteria | 2815 |
| 32 | Ga0070697_100000266 | 3300005536 | Bacteria | 42492 |
| 33 | Ga0070697_100082814 | 3300005536 | Bacteria | 2645 |
| 34 | Ga0070697_100165972 | 3300005536 | Bacteria | 1867 |
| 35 | Ga0070664_100050089 | 3300005564 | Bacteria | 3534 |
| 36 | Ga0068854_100047989 | 3300005578 | Bacteria | 3045 |
| 37 | Ga0068854_100254687 | 3300005578 | Bacteria | 1403 |
| 38 | Ga0068856_100021804 | 3300005614 | Bacteria | 6226 |
| 39 | Ga0068864_100034588 | 3300005618 | Bacteria | 4299 |
| 40 | Ga0068863_100264771 | 3300005841 | Bacteria | 1663 |
| 41 | Ga0068860_100465044 | 3300005843 | Bacteria | 1259 |
| 42 | Ga0070717_10003445 | 3300006028 | Bacteria | 11322 |
| 43 | Ga0070717_10065419 | 3300006028 | Bacteria | 3022 |
| 44 | Ga0097621_100007315 | 3300006237 | Bacteria | 7890 |
| 45 | Ga0068871_100010744 | 3300006358 | Bacteria | 6695 |
| 46 | Ga0075428_100029045 | 3300006844 | Bacteria | 6119 |
| 47 | Ga0075434_100012650 | 3300006871 | Bacteria | 8002 |
| 48 | Ga0075436_100001267 | 3300006914 | Bacteria | 17156 |
| 49 | Ga0075435_100010410 | 3300007076 | Bacteria | 6803 |
| 50 | Ga0105245_10010421 | 3300009098 | Bacteria | 8095 |
| 51 | Ga0105245_10033935 | 3300009098 | Bacteria | 4523 |
| 52 | Ga0105245_10187944 | 3300009098 | Bacteria | 1977 |
| 53 | Ga0105241_10001638 | 3300009174 | Bacteria | 17067 |
| 54 | Ga0105241_10122027 | 3300009174 | Bacteria | 2100 |
| 55 | Ga0105248_10624243 | 3300009177 | Bacteria | 1216 |
| 56 | Ga0157373_10001299 | 3300013100 | Bacteria | 19063 |
| 57 | Ga0157378_10000473 | 3300013297 | Bacteria | 38260 |
| 58 | Ga0163162_10001531 | 3300013306 | Bacteria | 21558 |
| 59 | Ga0163162_10015654 | 3300013306 | Bacteria | 7412 |
| 60 | Ga0163163_10000446 | 3300014325 | Bacteria | 37797 |
| 61 | Ga0163163_10042822 | 3300014325 | Bacteria | 4436 |
| 62 | Ga0157379_10001261 | 3300014968 | Bacteria | 20577 |
| 63 | Ga0157379_10141579 | 3300014968 | Bacteria | 2168 |
| 64 | Ga0157376_10255524 | 3300014969 | Bacteria | 1639 |
| 65 | Ga0182007_10011671 | 3300015262 | Bacteria | 3413 |
| 66 | Ga0228598_1009218 | 3300024227 | Bacteria | 1982 |
| 67 | Ga0209566_100116 | 3300025225 | Bacteria | 107510 |
| 68 | Ga0207692_10085717 | 3300025898 | Bacteria | 1695 |
| 69 | Ga0207699_10004846 | 3300025906 | Bacteria | 6438 |
| 70 | Ga0207684_10003347 | 3300025910 | Bacteria | 15715 |
| 71 | Ga0207684_10019671 | 3300025910 | Bacteria | 5775 |
| 72 | Ga0207654_10032923 | 3300025911 | Bacteria | 2869 |
| 73 | Ga0207707_10071245 | 3300025912 | Bacteria | 3029 |
| 74 | Ga0207693_10166633 | 3300025915 | Bacteria | 1734 |
| 75 | Ga0207693_10192654 | 3300025915 | Bacteria | 1604 |
| 76 | Ga0207646_10000341 | 3300025922 | Bacteria | 63056 |
| 77 | Ga0207646_10177459 | 3300025922 | Bacteria | 1924 |
| 78 | Ga0207646_10278865 | 3300025922 | Bacteria | 1510 |
| 79 | Ga0207700_10082344 | 3300025928 | Bacteria | 2516 |
| 80 | Ga0207700_10220897 | 3300025928 | Unclassified | 1606 |
| 81 | Ga0207664_10060199 | 3300025929 | Bacteria | 3026 |
| 82 | Ga0207644_10157492 | 3300025931 | Bacteria | 1763 |
| 83 | Ga0207665_10006450 | 3300025939 | Bacteria | 7785 |
| 84 | Ga0207661_10090540 | 3300025944 | Bacteria | 2547 |
| 85 | Ga0207651_10375009 | 3300025960 | Bacteria | 1204 |
| 86 | Ga0207640_10045339 | 3300025981 | Bacteria | 2823 |
| 87 | Ga0207640_10265177 | 3300025981 | Bacteria | 1341 |
| 88 | Ga0207658_10313888 | 3300025986 | Bacteria | 1355 |
| 89 | Ga0207677_10030672 | 3300026023 | Bacteria | 3435 |
| 90 | Ga0207703_10294974 | 3300026035 | Bacteria | 1477 |
| 91 | Ga0207702_10010742 | 3300026078 | Bacteria | 7646 |
| 92 | Ga0207641_10009768 | 3300026088 | Bacteria | 7901 |
| 93 | Ga0268264_10217612 | 3300028381 | Bacteria | 1757 |
| 94 | Ga0268264_10235949 | 3300028381 | Bacteria | 1692 |
| 95 | Ga0265338_10035686 | 3300028800 | Bacteria | 4771 |
| 96 | Ga0265324_10034844 | 3300029957 | Bacteria | 1753 |
| 97 | Ga0265762_1008987 | 3300030760 | Bacteria | 1780 |
| 98 | Ga0265332_10008808 | 3300031238 | Bacteria | 4517 |
| 99 | Ga0265328_10015298 | 3300031239 | Bacteria | 3008 |
| 100 | Ga0265328_10027317 | 3300031239 | Bacteria | 2140 |
| 101 | Ga0265325_10004113 | 3300031241 | Bacteria | 9264 |
| 102 | Ga0265339_10015305 | 3300031249 | Bacteria | 4601 |
| 103 | Ga0265331_10019152 | 3300031250 | Bacteria | 3537 |
| 104 | Ga0265316_10042167 | 3300031344 | Bacteria | 3648 |
| 105 | Ga0265316_10156027 | 3300031344 | Bacteria | 1708 |
| 106 | Ga0307408_100358920 | 3300031548 | Bacteria | 1239 |
| 107 | Ga0265313_10012096 | 3300031595 | Bacteria | 5312 |
| 108 | Ga0316575_10000059 | 3300031665 | Bacteria | 26793 |
| 109 | Ga0316579_10003280 | 3300031691 | Bacteria | 6282 |
| 110 | Ga0265314_10000348 | 3300031711 | Bacteria | 64175 |
| 111 | Ga0265314_10028048 | 3300031711 | Bacteria | 4204 |
| 112 | Ga0265314_10061327 | 3300031711 | Bacteria | 2561 |
| 113 | Ga0265314_10132355 | 3300031711 | Bacteria | 1554 |
| 114 | Ga0316576_10062332 | 3300031727 | Bacteria | 2735 |
| 115 | Ga0316576_10094476 | 3300031727 | Bacteria | 2230 |
| 116 | Ga0316578_10026241 | 3300031728 | Bacteria | 3283 |
| 117 | Ga0316578_10059789 | 3300031728 | Bacteria | 2242 |
| 118 | Ga0307405_10011471 | 3300031731 | Bacteria | 4646 |
| 119 | Ga0316577_10000813 | 3300031733 | Bacteria | 13558 |
| 120 | Ga0316577_10014528 | 3300031733 | Bacteria | 4323 |
| 121 | Ga0316577_10021028 | 3300031733 | Bacteria | 3618 |
| 122 | Ga0307413_10070574 | 3300031824 | Bacteria | 2197 |
| 123 | Ga0307410_10248376 | 3300031852 | Bacteria | 1382 |
| 124 | Ga0307412_10003107 | 3300031911 | Bacteria | 9218 |
| 125 | Ga0307412_10113362 | 3300031911 | Bacteria | 1940 |
| 126 | Ga0307409_100008600 | 3300031995 | Bacteria | 6209 |
| 127 | Ga0307416_100114218 | 3300032002 | Bacteria | 2388 |
| 128 | Ga0307414_10011022 | 3300032004 | Bacteria | 5283 |
| 129 | Ga0307411_10000390 | 3300032005 | Bacteria | 14991 |
| 130 | Ga0307415_100066445 | 3300032126 | Bacteria | 2516 |
| 131 | Ga0316583_10000720 | 3300032133 | Bacteria | 10263 |
| 132 | Ga0316583_10042508 | 3300032133 | Bacteria | 1607 |
| 133 | Ga0316583_10063243 | 3300032133 | Bacteria | 1296 |
| 134 | Ga0316585_10003693 | 3300032137 | Bacteria | 4218 |
| 135 | Ga0316585_10076468 | 3300032137 | Bacteria | 1089 |
| 136 | Ga0316580_10038111 | 3300032139 | Bacteria | 1486 |
| 137 | Ga0316593_10011702 | 3300032168 | Bacteria | 2558 |
| 138 | Ga0316592_1024480 | 3300033524 | Bacteria | 1298 |
| 139 | Ga0316592_1033203 | 3300033524 | Bacteria | 1127 |
| 140 | Ga0316586_1002282 | 3300033527 | Bacteria | 2369 |
| 141 | Ga0316596_1001414 | 3300033541 | Bacteria | 4829 |
| 142 | Ga0316596_1004124 | 3300033541 | Bacteria | 3231 |
| 143 | Ga0316596_1008912 | 3300033541 | Bacteria | 2400 |
| 144 | Ga0316212_1002278 | 3300033547 | Bacteria | 2727 |
| 145 | Ga0373939_0004499 | 3300035114 | Bacteria | 3302 |
| 146 | Ga0373956_0001130 | 3300035119 | Bacteria | 11014 |
| 147 | Ga0373955_0022685 | 3300035172 | Bacteria | 3187 |
| 148 | Ga0373942_0059513 | 3300035207 | Bacteria | 1092 |
| 149 | Ga0316574_0000059 | 3300035398 | Bacteria | 28923 |
| 150 | Ga0316574_0013560 | 3300035398 | Bacteria | 4688 |
| 151 | Ga0316574_0083188 | 3300035398 | Bacteria | 2034 |
| 152 | Ga0373931_0028383 | 3300035691 | Bacteria | 2865 |
| 153 | Ga0373935_0017490 | 3300035692 | Bacteria | 4351 |
| 154 | Ga0373927_0003800 | 3300035695 | Bacteria | 10715 |
| 155 | Ga0373927_0151559 | 3300035695 | Bacteria | 1518 |
| 156 | Ga0373933_0004128 | 3300035724 | Bacteria | 8003 |
| 157 | Ga0373947_0010631 | 3300035725 | Bacteria | 5280 |
| 158 | Ga0373937_0000078 | 3300036401 | Bacteria | 88688 |
| 159 | Ga0373937_0228015 | 3300036401 | Bacteria | 1754 |
| 160 | Ga0316582_0004580 | 3300036647 | Bacteria | 7003 |
| 161 | Ga0316582_0076196 | 3300036647 | Bacteria | 2180 |
| 162 | Ga0316582_0079800 | 3300036647 | Bacteria | 2134 |
| 163 | Ga0316582_0152656 | 3300036647 | Bacteria | 1562 |
| 164 | Ga0316584_0076953 | 3300036712 | Bacteria | 2500 |
| 165 | Ga0316584_0096795 | 3300036712 | Bacteria | 2209 |
| 166 | Ga0316584_0123504 | 3300036712 | Bacteria | 1934 |
| 167 | Ga0373925_0006773 | 3300037068 | Bacteria | 8398 |
| 168 | Ga0373925_0009721 | 3300037068 | Bacteria | 6992 |
| 169 | Ga0316581_0037506 | 3300037588 | Bacteria | 1473 |
| 170 | Ga0400483_008504 | 3300039062 | Bacteria | 2291 |
| 171 | Ga0400483_224244 | 3300039062 | Bacteria | 13428 |
| 172 | Ga0400483_255323 | 3300039062 | Bacteria | 3059 |
| 173 | Ga0400489_26114 | 3300039093 | Bacteria | 44665 |
| 174 | Ga0436365_0580984 | 3300039437 | Bacteria | 1923 |
| 175 | Ga0436363_1350215 | 3300039450 | Bacteria | 1295 |
| 176 | Ga0453683_0001260 | 3300044673 | Bacteria | 22543 |
| 177 | Ga0453683_0040424 | 3300044673 | Bacteria | 2928 |
| 178 | Ga0453684_0572292 | 3300044712 | Bacteria | 1242 |
| 179 | Ga0451576_0005235 | 3300045051 | Bacteria | 16381 |
| 180 | Ga0466967_0012167 | 3300045976 | Bacteria | 6566 |
| 181 | Ga0495590_0033987 | 3300046457 | Bacteria | 1782 |
| 182 | Ga0495651_0045703 | 3300046462 | Bacteria | 3392 |
| 183 | Ga0495651_0063424 | 3300046462 | Bacteria | 2825 |
| 184 | Ga0495580_0001182 | 3300046472 | Bacteria | 22952 |
| 185 | Ga0495580_0005708 | 3300046472 | Bacteria | 10237 |
| 186 | Ga0495580_0071614 | 3300046472 | Bacteria | 2422 |
| 187 | Ga0495580_0081222 | 3300046472 | Bacteria | 2259 |
| 188 | Ga0495582_0001573 | 3300046473 | Bacteria | 12875 |
| 189 | Ga0495639_0065900 | 3300046475 | Bacteria | 1666 |
| 190 | Ga0495666_0021858 | 3300046526 | Bacteria | 3167 |
| 191 | Ga0495665_0011363 | 3300046531 | Bacteria | 4819 |
| 192 | Ga0495665_0026731 | 3300046531 | Bacteria | 3099 |
| 193 | Ga0495665_0078393 | 3300046531 | Bacteria | 1738 |
| 194 | Ga0495587_0033598 | 3300046536 | Bacteria | 3096 |
| 195 | Ga0495667_0068620 | 3300046559 | Bacteria | 2315 |
| 196 | Ga0495635_0082644 | 3300046663 | Bacteria | 2198 |
| 197 | Ga0495657_0132103 | 3300046675 | Bacteria | 1563 |
| 198 | Ga0495669_0046958 | 3300046684 | Bacteria | 1928 |
| 199 | Ga0495675_0025238 | 3300047444 | Bacteria | 3789 |
| 200 | Ga0495675_0083579 | 3300047444 | Bacteria | 2009 |
| 201 | Ga0495602_0205584 | 3300048088 | Bacteria | 1499 |
| 202 | Ga0496100_0091983 | 3300048903 | Bacteria | 2072 |
| 203 | Ga0496101_0113571 | 3300048904 | Bacteria | 2041 |
| 204 | Ga0496102_0005937 | 3300048905 | Bacteria | 10396 |
| 205 | Ga0496102_0656686 | 3300048905 | Bacteria | 972 |
| 206 | Ga0496103_0100368 | 3300048906 | Bacteria | 1831 |
| 207 | Ga0496104_0123431 | 3300048907 | Bacteria | 2486 |
| 208 | Ga0496104_0135617 | 3300048907 | Bacteria | 2365 |
| 209 | Ga0496104_0140128 | 3300048907 | Bacteria | 2323 |
| 210 | Ga0496104_0404940 | 3300048907 | Bacteria | 1276 |
| 211 | Ga0496106_0056921 | 3300048909 | Bacteria | 2956 |
| 212 | Ga0496107_0026288 | 3300048910 | Bacteria | 4125 |
| 213 | Ga0496107_0042844 | 3300048910 | Bacteria | 3252 |
| 214 | Ga0496110_0000615 | 3300048913 | Bacteria | 24551 |
| 215 | Ga0496112_0089568 | 3300048915 | Bacteria | 3045 |
| 216 | Ga0496112_0231889 | 3300048915 | Bacteria | 1800 |
| 217 | Ga0496113_0241885 | 3300048916 | Bacteria | 1440 |
| 218 | Ga0496114_0059045 | 3300048917 | Bacteria | 3204 |
| 219 | Ga0496116_0040320 | 3300048919 | Bacteria | 3216 |
| 220 | Ga0496116_0069807 | 3300048919 | Bacteria | 2233 |
| 221 | Ga0496122_0087898 | 3300048925 | Bacteria | 2133 |
| 222 | Ga0496124_0300774 | 3300048927 | Bacteria | 1159 |
| 223 | Ga0496125_0002128 | 3300048928 | Bacteria | 26599 |
| 224 | Ga0496125_0015145 | 3300048928 | Bacteria | 7473 |
| 225 | Ga0501037_0126557 | 3300049573 | Bacteria | 1834 |
| 226 | Ga0501042_0037298 | 3300049578 | Bacteria | 3450 |
| 227 | Ga0501048_0044650 | 3300049582 | Bacteria | 3167 |
| 228 | Ga0501072_0232725 | 3300049588 | Bacteria | 1468 |
| 229 | Ga0501075_0113279 | 3300049591 | Bacteria | 2062 |
| 230 | Ga0501076_0011887 | 3300049592 | Bacteria | 6501 |
| 231 | Ga0501076_0146815 | 3300049592 | Bacteria | 1918 |
| 232 | Ga0501045_0107489 | 3300049824 | Bacteria | 2067 |
| 233 | nmdc:mga0n895_10903_c1 | 3300050512 | Bacteria | 8073 |
| 234 | nmdc:mga0rr50_45157_c1 | 3300050513 | Bacteria | 3236 |
| 235 | nmdc:mga08x19_1063_c1 | 3300050514 | Bacteria | 17156 |
| 236 | 2745169574 | 2744054657 | Bacteria | 5016802 |
| 237 | 2817616346 | 2816332336 | Bacteria | 5207640 |
| 238 | 2857464595 | 2857460504 | Bacteria | 5194327 |
| 239 | 2857472217 | 2857465823 | Bacteria | 6772595 |
| 240 | 2857477590 | 2857472729 | Bacteria | 6568124 |
| 241 | 2857597495 | 2857591370 | Bacteria | 6569758 |
| 242 | 2898908171 | 2898907183 | Bacteria | 4067722 |
| 243 | 2929297553 | 2929297113 | Bacteria | 3141306 |
| 244 | 2936366216 | 2936361878 | Bacteria | 5632809 |
| 245 | 2977255746 | 2977254563 | Bacteria | 4828420 |
| 246 | 3001892492 | 3001892409 | Bacteria | 6328293 |
| 247 | Ga0495580_0008511 | |||
| 248 | JGI24751J29686_10012134 | |||
| 249 | Ga0070658_10169553 | |||
| 250 | Ga0068869_100156033 | |||
| 251 | Ga0068868_100163504 | |||
| 252 | Ga0070689_100032802 | |||
| 253 | Ga0070675_100126021 | |||
| 254 | Ga0070667_100189256 | |||
| 255 | Ga0070714_100010217 | |||
| 256 | Ga0070714_100181241 | |||
| 257 | Ga0070714_100189801 | |||
| 258 | Ga0070713_100024512 | |||
| 259 | Ga0070713_100028018 | |||
| 260 | Ga0070710_10117304 | |||
| 261 | Ga0070701_10071365 | |||
| 262 | Ga0070711_100049047 | |||
| 263 | Ga0070708_100015048 | |||
| 264 | Ga0070708_100216499 | |||
| 265 | Ga0070681_10202139 | |||
| 266 | Ga0070706_100000935 | |||
| 267 | Ga0070706_100006968 | |||
| 268 | Ga0070706_100107621 | |||
| 269 | Ga0070707_100002157 | |||
| 270 | Ga0070707_100003649 | |||
| 271 | Ga0070707_100217710 | |||
| 272 | Ga0070707_100392029 | |||
| 273 | Ga0070698_100002044 | |||
| 274 | Ga0070699_100002908 | |||
| 275 | Ga0070699_100033580 | |||
| 276 | Ga0070699_100067910 | |||
| 277 | Ga0070699_100081777 | |||
| 278 | Ga0070697_100000266 | |||
| 279 | Ga0070697_100082814 | |||
| 280 | Ga0070697_100165972 | |||
| 281 | Ga0070664_100050089 | |||
| 282 | Ga0068854_100047989 | |||
| 283 | Ga0068854_100254687 | |||
| 284 | Ga0068856_100021804 | |||
| 285 | Ga0068864_100034588 | |||
| 286 | Ga0068863_100264771 | |||
| 287 | Ga0068860_100465044 | |||
| 288 | Ga0070717_10003445 | |||
| 289 | Ga0070717_10065419 | |||
| 290 | Ga0097621_100007315 | |||
| 291 | Ga0068871_100010744 | |||
| 292 | Ga0075428_100029045 | |||
| 293 | Ga0075434_100012650 | |||
| 294 | Ga0075436_100001267 | |||
| 295 | Ga0075435_100010410 | |||
| 296 | Ga0105245_10010421 | |||
| 297 | Ga0105245_10033935 | |||
| 298 | Ga0105245_10187944 | |||
| 299 | Ga0105241_10001638 | |||
| 300 | Ga0105241_10122027 | |||
| 301 | Ga0105248_10624243 | |||
| 302 | Ga0157373_10001299 | |||
| 303 | Ga0157378_10000473 | |||
| 304 | Ga0163162_10001531 | |||
| 305 | Ga0163162_10015654 | |||
| 306 | Ga0163163_10000446 | |||
| 307 | Ga0163163_10042822 | |||
| 308 | Ga0157379_10001261 | |||
| 309 | Ga0157379_10141579 | |||
| 310 | Ga0157376_10255524 | |||
| 311 | Ga0182007_10011671 | |||
| 312 | Ga0228598_1009218 | |||
| 313 | Ga0209566_100116 | |||
| 314 | Ga0207692_10085717 | |||
| 315 | Ga0207699_10004846 | |||
| 316 | Ga0207684_10003347 | |||
| 317 | Ga0207684_10019671 | |||
| 318 | Ga0207654_10032923 | |||
| 319 | Ga0207707_10071245 | |||
| 320 | Ga0207693_10166633 | |||
| 321 | Ga0207693_10192654 | |||
| 322 | Ga0207646_10000341 | |||
| 323 | Ga0207646_10177459 | |||
| 324 | Ga0207646_10278865 | |||
| 325 | Ga0207700_10082344 | |||
| 326 | Ga0207700_10220897 | |||
| 327 | Ga0207664_10060199 | |||
| 328 | Ga0207644_10157492 | |||
| 329 | Ga0207665_10006450 | |||
| 330 | Ga0207661_10090540 | |||
| 331 | Ga0207651_10375009 | |||
| 332 | Ga0207640_10045339 | |||
| 333 | Ga0207640_10265177 | |||
| 334 | Ga0207658_10313888 | |||
| 335 | Ga0207677_10030672 | |||
| 336 | Ga0207703_10294974 | |||
| 337 | Ga0207702_10010742 | |||
| 338 | Ga0207641_10009768 | |||
| 339 | Ga0268264_10217612 | |||
| 340 | Ga0268264_10235949 | |||
| 341 | Ga0265338_10035686 | |||
| 342 | Ga0265324_10034844 | |||
| 343 | Ga0265762_1008987 | |||
| 344 | Ga0265332_10008808 | |||
| 345 | Ga0265328_10015298 | |||
| 346 | Ga0265328_10027317 | |||
| 347 | Ga0265325_10004113 | |||
| 348 | Ga0265339_10015305 | |||
| 349 | Ga0265331_10019152 | |||
| 350 | Ga0265316_10042167 | |||
| 351 | Ga0265316_10156027 | |||
| 352 | Ga0307408_100358920 | |||
| 353 | Ga0265313_10012096 | |||
| 354 | Ga0316575_10000059 | |||
| 355 | Ga0316579_10003280 | |||
| 356 | Ga0265314_10000348 | |||
| 357 | Ga0265314_10028048 | |||
| 358 | Ga0265314_10061327 | |||
| 359 | Ga0265314_10132355 | |||
| 360 | Ga0316576_10062332 | |||
| 361 | Ga0316576_10094476 | |||
| 362 | Ga0316578_10026241 | |||
| 363 | Ga0316578_10059789 | |||
| 364 | Ga0307405_10011471 | |||
| 365 | Ga0316577_10000813 | |||
| 366 | Ga0316577_10014528 | |||
| 367 | Ga0316577_10021028 | |||
| 368 | Ga0307413_10070574 | |||
| 369 | Ga0307410_10248376 | |||
| 370 | Ga0307412_10003107 | |||
| 371 | Ga0307412_10113362 | |||
| 372 | Ga0307409_100008600 | |||
| 373 | Ga0307416_100114218 | |||
| 374 | Ga0307414_10011022 | |||
| 375 | Ga0307411_10000390 | |||
| 376 | Ga0307415_100066445 | |||
| 377 | Ga0316583_10000720 | |||
| 378 | Ga0316583_10042508 | |||
| 379 | Ga0316583_10063243 | |||
| 380 | Ga0316585_10003693 | |||
| 381 | Ga0316585_10076468 | |||
| 382 | Ga0316580_10038111 | |||
| 383 | Ga0316593_10011702 | |||
| 384 | Ga0316592_1024480 | |||
| 385 | Ga0316592_1033203 | |||
| 386 | Ga0316586_1002282 | |||
| 387 | Ga0316596_1001414 | |||
| 388 | Ga0316596_1004124 | |||
| 389 | Ga0316596_1008912 | |||
| 390 | Ga0316212_1002278 | |||
| 391 | Ga0373939_0004499 | |||
| 392 | Ga0373956_0001130 | |||
| 393 | Ga0373955_0022685 | |||
| 394 | Ga0373942_0059513 | |||
| 395 | Ga0316574_0000059 | |||
| 396 | Ga0316574_0013560 | |||
| 397 | Ga0316574_0083188 | |||
| 398 | Ga0373931_0028383 | |||
| 399 | Ga0373935_0017490 | |||
| 400 | Ga0373927_0003800 | |||
| 401 | Ga0373927_0151559 | |||
| 402 | Ga0373933_0004128 | |||
| 403 | Ga0373947_0010631 | |||
| 404 | Ga0373937_0000078 | |||
| 405 | Ga0373937_0228015 | |||
| 406 | Ga0316582_0004580 | |||
| 407 | Ga0316582_0076196 | |||
| 408 | Ga0316582_0079800 | |||
| 409 | Ga0316582_0152656 | |||
| 410 | Ga0316584_0076953 | |||
| 411 | Ga0316584_0096795 | |||
| 412 | Ga0316584_0123504 | |||
| 413 | Ga0373925_0006773 | |||
| 414 | Ga0373925_0009721 | |||
| 415 | Ga0316581_0037506 | |||
| 416 | Ga0400483_008504 | |||
| 417 | Ga0400483_224244 | |||
| 418 | Ga0400483_255323 | |||
| 419 | Ga0400489_26114 | |||
| 420 | Ga0436365_0580984 | |||
| 421 | Ga0436363_1350215 | |||
| 422 | Ga0453683_0001260 | |||
| 423 | Ga0453683_0040424 | |||
| 424 | Ga0453684_0572292 | |||
| 425 | Ga0451576_0005235 | |||
| 426 | Ga0466967_0012167 | |||
| 427 | Ga0495590_0033987 | |||
| 428 | Ga0495651_0045703 | |||
| 429 | Ga0495651_0063424 | |||
| 430 | Ga0495580_0001182 | |||
| 431 | Ga0495580_0005708 | |||
| 432 | Ga0495580_0071614 | |||
| 433 | Ga0495580_0081222 | |||
| 434 | Ga0495582_0001573 | |||
| 435 | Ga0495639_0065900 | |||
| 436 | Ga0495666_0021858 | |||
| 437 | Ga0495665_0011363 | |||
| 438 | Ga0495665_0026731 | |||
| 439 | Ga0495665_0078393 | |||
| 440 | Ga0495587_0033598 | |||
| 441 | Ga0495667_0068620 | |||
| 442 | Ga0495635_0082644 | |||
| 443 | Ga0495657_0132103 | |||
| 444 | Ga0495669_0046958 | |||
| 445 | Ga0495675_0025238 | |||
| 446 | Ga0495675_0083579 | |||
| 447 | Ga0495602_0205584 | |||
| 448 | Ga0496100_0091983 | |||
| 449 | Ga0496101_0113571 | |||
| 450 | Ga0496102_0005937 | |||
| 451 | Ga0496102_0656686 | |||
| 452 | Ga0496103_0100368 | |||
| 453 | Ga0496104_0123431 | |||
| 454 | Ga0496104_0135617 | |||
| 455 | Ga0496104_0140128 | |||
| 456 | Ga0496104_0404940 | |||
| 457 | Ga0496106_0056921 | |||
| 458 | Ga0496107_0026288 | |||
| 459 | Ga0496107_0042844 | |||
| 460 | Ga0496110_0000615 | |||
| 461 | Ga0496112_0089568 | |||
| 462 | Ga0496112_0231889 | |||
| 463 | Ga0496113_0241885 | |||
| 464 | Ga0496114_0059045 | |||
| 465 | Ga0496116_0040320 | |||
| 466 | Ga0496116_0069807 | |||
| 467 | Ga0496122_0087898 | |||
| 468 | Ga0496124_0300774 | |||
| 469 | Ga0496125_0002128 | |||
| 470 | Ga0496125_0015145 | |||
| 471 | Ga0501037_0126557 | |||
| 472 | Ga0501042_0037298 | |||
| 473 | Ga0501048_0044650 | |||
| 474 | Ga0501072_0232725 | |||
| 475 | Ga0501075_0113279 | |||
| 476 | Ga0501076_0011887 | |||
| 477 | Ga0501076_0146815 | |||
| 478 | Ga0501045_0107489 | |||
| 479 | nmdc:mga0n895_10903_c1 | |||
| 480 | nmdc:mga0rr50_45157_c1 | |||
| 481 | nmdc:mga08x19_1063_c1 | |||
| 482 | 2745169574 | |||
| 483 | 2817616346 | |||
| 484 | 2857464595 | |||
| 485 | 2857472217 | |||
| 486 | 2857477590 | |||
| 487 | 2857597495 | |||
| 488 | 2898908171 | |||
| 489 | 2929297553 | |||
| 490 | 2936366216 | |||
| 491 | 2977255746 | |||
| 492 | 3001892492 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1dku-assembly1.cif.gz_A | crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. | 0.9601 | 32 | 339 |
| 1dkr-assembly1.cif.gz_B | crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. | 0.9588 | 29 | 339 |
| 3dah-assembly1.cif.gz_B | 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from burkholderia pseudomallei | 0.9548 | 33 | 339 |
| 1dku-assembly1.cif.gz_A | crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. | 0.9538 | 32 | 339 |
| 7xmu-assembly1.cif.gz_A | e.coli phosphoribosylpyrophosphate (prpp) synthetase type a filament bound with adp, pi and r5p | 0.953 | 32 | 341 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1dkuA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.985 | 176 | 317 | 3.40.50.2020 |
| 1dkuA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9774 | 176 | 317 | 3.40.50.2020 |
| 3dahB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9624 | 176 | 317 | 3.40.50.2020 |
| 3dahB02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.955 | 176 | 317 | 3.40.50.2020 |
| af_A4HTJ9_703_814_3.40.50.2020 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9539 | 232 | 317 | 3.40.50.2020 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V9ZFW7-F1-model_v4 | Phosphoribosylpyrophosphate synthetase | 1.002 | 241 | 341 |
GO:0000287
GO:0002189 GO:0004749 GO:0005737 GO:0006015 GO:0006164 |
| AF-A0A520HHJ7-F1-model_v4 | Phosphoribosylpyrophosphate synthetase | 0.9989 | 34 | 119 |
GO:0000287
GO:0002189 GO:0004749 GO:0005737 GO:0006015 GO:0006164 |
| AF-A0A3S2B403-F1-model_v4 | Phosphoribosylpyrophosphate synthetase | 0.998 | 34 | 120 |
GO:0000287
GO:0002189 GO:0004749 GO:0005737 GO:0006015 GO:0006164 |
| AF-K2BZT4-F1-model_v4 | Ribose-phosphate pyrophosphokinase N-terminal domain-containing protein | 0.9979 | 33 | 120 |
GO:0000287
GO:0002189 GO:0004749 GO:0005737 GO:0006015 GO:0006164 |
| AF-A0A7V2UKQ2-F1-model_v4 | Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) | 0.9936 | 31 | 121 |
GO:0000287
GO:0002189 GO:0004749 GO:0005737 GO:0006015 GO:0006164 GO:0016301 |