F358383

General Info

Members Datasets Scaffolds Average Seq Length
246 183 230 488

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0018673|Ga0466969_0018673_754_2376
Length 540
Sequence LSTERNRRPSSEYLIVLPNLMTHRWHNLGDLIDRTLDLNATAIVDLRDGKLPHRYTHADIDGLASGVAAALRTRGLAAGAHVAIASLNRAEYLIAYFGIMRAGYVAVPINIKQSREILDYVIDDAGISLAFVDGARREALAARVPVIDFDDDGPDGFAAQIRPADFESVCPAPDDVAQMLYTSGSTGKPKGVPLTHAGQLWALGATYVRPEDPSSERLLLAQPLFHMNGLFMAKRAFAANASLVILPSFDVASYVDALERYRITALTAVPTMFARLVKDPQTLAGRDVSSLKRVMLGSAPMSAALLARIQAAFPHTHIHHGYGTTEAGPSIFGPHPDGIPLPPLALGYPLSPDAVKLVDGDDADHGVLCMRNPAVMRGYHGLPEKSAQVLDEGWYYSGDVMRRDANGFFYFVGRADDMFVCAGENIYPVEVEKLLEAHPEVRQASVVPLPDEERAAVPVAFVVRQPGSTLSAEALKRHALANGPAYQHPRRVAFVAELPLAGTNKVDRHALLQQARALEAEHGWSDDRNNTRPLSGALAS

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
3 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
4 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
5 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
6 2643221569 Achromobacter sp. Root565 Isolate Unclassified
7 2855730933 Achromobacter sp. HZ28 Isolate Nodule
8 2855767633 Achromobacter sp. HZ34 Isolate Nodule
9 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
10 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
11 2858950400 Achromobacter sp. K91 Isolate Unclassified
12 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
13 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
14 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
15 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
16 2941479691
17 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
18 3300003349 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
96 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
97 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
103 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
112 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
116 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
117 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
164 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
167 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
168 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
169 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
170 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
171 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
174 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
175 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
176 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
181 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.5
Metatranscriptomes 0
Isolates 6.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.45
Nodule 2.03
Rhizoplane 1.22
Rhizosphere 65.04
Stem 0
Stem Tuber 0
Unclassified 16.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10000700 3300003215 Bacteria 20500
2 JGI26129J50193_1001107 3300003349 Bacteria 1797
3 Ga0065704_10113198 3300005289 Bacteria 1917
4 Ga0070691_10007969 3300005341 Bacteria 4845
5 Ga0070661_100005350 3300005344 Bacteria 8852
6 Ga0070659_100062203 3300005366 Bacteria 2950
7 Ga0070713_100004238 3300005436 Bacteria 9584
8 Ga0070713_100054089 3300005436 Bacteria 3329
9 Ga0070701_10010527 3300005438 Bacteria 4092
10 Ga0070694_100115064 3300005444 Bacteria 1921
11 Ga0070706_100141741 3300005467 Bacteria 2243
12 Ga0070706_100151428 3300005467 Bacteria 2165
13 Ga0070707_100006939 3300005468 Bacteria 10500
14 Ga0070707_100039400 3300005468 Bacteria 4516
15 Ga0070707_100084675 3300005468 Bacteria 3063
16 Ga0070699_100010785 3300005518 Bacteria 7909
17 Ga0070697_100096765 3300005536 Bacteria 2449
18 Ga0070696_100002926 3300005546 Bacteria 11349
19 Ga0070664_100051219 3300005564 Bacteria 3496
20 Ga0068870_10017833 3300005840 Bacteria 3416
21 Ga0068863_100195583 3300005841 Bacteria 1944
22 Ga0070717_10003899 3300006028 Bacteria 10729
23 Ga0070717_10008543 3300006028 Bacteria 7647
24 Ga0075365_10019588 3300006038 Bacteria 4180
25 Ga0075368_10004542 3300006042 Bacteria 4716
26 Ga0075363_100013129 3300006048 Bacteria 4006
27 Ga0075364_10028755 3300006051 Bacteria 3560
28 Ga0070712_100000946 3300006175 Bacteria 17458
29 Ga0075362_10018171 3300006177 Bacteria 2905
30 Ga0075369_10000609 3300006186 Bacteria 11352
31 Ga0075366_10023922 3300006195 Bacteria 3560
32 Ga0075428_100001796 3300006844 Bacteria 22948
33 Ga0075428_100014636 3300006844 Bacteria 8711
34 Ga0075430_100000451 3300006846 Bacteria 30724
35 Ga0075430_100017009 3300006846 Bacteria 6193
36 Ga0075430_100017699 3300006846 Bacteria 6068
37 Ga0075431_100001743 3300006847 Bacteria 20479
38 Ga0075431_100007609 3300006847 Bacteria 10785
39 Ga0075431_100015550 3300006847 Bacteria 7711
40 Ga0075431_100015759 3300006847 Bacteria 7663
41 Ga0075431_100077463 3300006847 Bacteria 3432
42 Ga0075433_10077967 3300006852 Bacteria 2919
43 Ga0075434_100117174 3300006871 Bacteria 2676
44 Ga0075429_100008356 3300006880 Bacteria 9009
45 Ga0075429_100105448 3300006880 Bacteria 2462
46 Ga0099794_10000299 3300007265 Bacteria 17021
47 Ga0105240_10044694 3300009093 Bacteria 5625
48 Ga0111539_10028786 3300009094 Bacteria 6775
49 Ga0114129_10019348 3300009147 Bacteria 9697
50 Ga0114129_10032296 3300009147 Bacteria 7398
51 Ga0105243_10025297 3300009148 Bacteria 4535
52 Ga0105243_10051124 3300009148 Bacteria 3267
53 Ga0163162_10057523 3300013306 Bacteria 3917
54 Ga0157372_10056574 3300013307 Bacteria 4382
55 Ga0213875_10009652 3300021388 Bacteria 4878
56 Ga0209758_1001682 3300025297 Bacteria 24935
57 Ga0209050_1001827 3300025298 Bacteria 20722
58 Ga0207653_10003967 3300025885 Bacteria 4650
59 Ga0207653_10011513 3300025885 Bacteria 2759
60 Ga0207692_10098398 3300025898 Bacteria 1601
61 Ga0207684_10001199 3300025910 Bacteria 28898
62 Ga0207646_10019689 3300025922 Bacteria 6266
63 Ga0207646_10076217 3300025922 Bacteria 2997
64 Ga0207646_10175870 3300025922 Bacteria 1933
65 Ga0207700_10010797 3300025928 Bacteria 5790
66 Ga0207706_10027191 3300025933 Bacteria 5116
67 Ga0207704_10073693 3300025938 Bacteria 2175
68 Ga0207668_10030223 3300025972 Bacteria 3559
69 Ga0207678_10024752 3300026067 Bacteria 5241
70 Ga0207708_10017764 3300026075 Bacteria 5354
71 Ga0209967_1000764 3300027364 Bacteria 4113
72 Ga0210000_1000613 3300027462 Bacteria 4887
73 Ga0209983_1000102 3300027665 Bacteria 14485
74 Ga0209588_1012040 3300027671 Bacteria 2622
75 Ga0209971_1000085 3300027682 Bacteria 28632
76 Ga0209966_1000702 3300027695 Bacteria 7230
77 Ga0209998_10000192 3300027717 Bacteria 21712
78 Ga0209974_10000734 3300027876 Bacteria 11200
79 Ga0207428_10018566 3300027907 Bacteria 5937
80 Ga0268265_10056262 3300028380 Bacteria 2992
81 Ga0265330_10004734 3300031235 Bacteria 6873
82 Ga0265340_10000767 3300031247 Bacteria 18259
83 Ga0265327_10015631 3300031251 Bacteria 4883
84 Ga0265313_10000223 3300031595 Bacteria 61143
85 Ga0307508_10037284 3300031616 Bacteria 4374
86 Ga0307416_100243011 3300032002 Bacteria 1746
87 Ga0307411_10118508 3300032005 Bacteria 1910
88 Ga0373924_0024775 3300035410 Bacteria 2367
89 Ga0373937_0097183 3300036401 Bacteria 2731
90 Ga0395900_0014623 3300037418 Bacteria 8005
91 Ga0395905_0099698 3300037471 Bacteria 2728
92 Ga0436364_0022735 3300037853 Bacteria 162985
93 Ga0395901_0001945 3300038443 Bacteria 21264
94 Ga0436365_1859117 3300039437 Bacteria 5808
95 Ga0436361_0418486 3300039447 Bacteria 13478
96 Ga0436362_1197835 3300039453 Bacteria 6459
97 Ga0439460_0000771 3300042461 Bacteria 7217
98 Ga0466969_0018673 3300044656 Bacteria 3611
99 Ga0466977_0009365 3300044666 Bacteria 5514
100 Ga0451576_0044155 3300045051 Bacteria 4700
101 Ga0495592_0013901 3300046454 Bacteria 6116
102 Ga0495638_0024382 3300046460 Bacteria 3944
103 Ga0495651_0098158 3300046462 Bacteria 2186
104 Ga0495653_0062609 3300046463 Bacteria 2810
105 Ga0495605_0002401 3300046474 Bacteria 11593
106 Ga0495664_0024281 3300046477 Bacteria 3522
107 Ga0495607_0018182 3300046501 Bacteria 4487
108 Ga0495608_0021533 3300046511 Bacteria 4424
109 Ga0495610_0020593 3300046512 Bacteria 3659
110 Ga0495618_0025994 3300046514 Bacteria 3636
111 Ga0495620_0014148 3300046515 Bacteria 4063
112 Ga0495648_0001073 3300046524 Bacteria 27779
113 Ga0495654_0010546 3300046530 Bacteria 5027
114 Ga0495645_0020116 3300046543 Bacteria 4813
115 Ga0495625_0059061 3300046660 Bacteria 2722
116 Ga0495635_0009394 3300046663 Bacteria 6837
117 Ga0495661_0010961 3300046665 Bacteria 6158
118 Ga0495660_0050131 3300046810 Bacteria 2276
119 Ga0495672_0036308 3300047320 Bacteria 3027
120 Ga0495684_0096197 3300047471 Bacteria 2241
121 Ga0495686_0021580 3300047472 Bacteria 4272
122 Ga0495686_0069923 3300047472 Bacteria 2163
123 Ga0496104_0028647 3300048907 Bacteria 5162
124 Ga0496105_0036139 3300048908 Bacteria 4068
125 Ga0496116_0001130 3300048919 Bacteria 31821
126 Ga0496116_0004624 3300048919 Bacteria 13041
127 Ga0496116_0007940 3300048919 Bacteria 9300
128 Ga0496116_0008054 3300048919 Bacteria 9218
129 Ga0496117_0015433 3300048920 Bacteria 6514
130 Ga0496118_0044403 3300048921 Bacteria 3481
131 Ga0496118_0044757 3300048921 Bacteria 3462
132 Ga0496120_0051417 3300048923 Bacteria 2353
133 Ga0496121_0000159 3300048924 Bacteria 147049
134 Ga0496121_0008801 3300048924 Bacteria 11763
135 Ga0496121_0032379 3300048924 Bacteria 4753
136 Ga0496122_0000017 3300048925 Bacteria 439553
137 Ga0496122_0004114 3300048925 Bacteria 18408
138 Ga0496122_0015066 3300048925 Bacteria 7420
139 Ga0496122_0078166 3300048925 Bacteria 2319
140 Ga0496123_0000033 3300048926 Bacteria 274961
141 Ga0496123_0005361 3300048926 Bacteria 12942
142 Ga0496123_0027220 3300048926 Bacteria 4263
143 Ga0496124_0088167 3300048927 Bacteria 2537
144 Ga0496124_0107111 3300048927 Bacteria 2256
145 Ga0496125_0000005 3300048928 Bacteria 827598
146 Ga0496125_0001721 3300048928 Bacteria 30431
147 Ga0496125_0006333 3300048928 Bacteria 12845
148 Ga0496125_0006907 3300048928 Bacteria 12148
149 Ga0496125_0023014 3300048928 Bacteria 5767
150 Ga0496126_0007755 3300048929 Bacteria 11703
151 Ga0495682_0000001 3300049460 Bacteria 1559116
152 Ga0501034_0002915 3300049571 Bacteria 19854
153 Ga0501036_0019004 3300049572 Bacteria 5765
154 Ga0501037_0063021 3300049573 Bacteria 2703
155 Ga0501038_0003457 3300049574 Bacteria 14735
156 Ga0501039_0012670 3300049575 Bacteria 6443
157 Ga0501040_0002853 3300049576 Bacteria 11159
158 Ga0501040_0047701 3300049576 Bacteria 2925
159 Ga0501040_0053228 3300049576 Bacteria 2772
160 Ga0501042_0002092 3300049578 Bacteria 12112
161 Ga0501046_0000849 3300049580 Bacteria 29714
162 Ga0501047_0002975 3300049581 Bacteria 16070
163 Ga0501047_0112558 3300049581 Bacteria 2604
164 Ga0501048_0009865 3300049582 Bacteria 7160
165 Ga0501048_0031741 3300049582 Bacteria 3820
166 Ga0501068_0018076 3300049584 Bacteria 4083
167 Ga0501068_0040447 3300049584 Bacteria 2799
168 Ga0501071_0036452 3300049587 Bacteria 3508
169 Ga0501072_0004109 3300049588 Bacteria 11019
170 Ga0501072_0171521 3300049588 Bacteria 1731
171 Ga0501074_0001158 3300049590 Bacteria 17264
172 Ga0501074_0012420 3300049590 Bacteria 6191
173 Ga0501075_0008418 3300049591 Bacteria 7195
174 Ga0501075_0052897 3300049591 Bacteria 3054
175 Ga0501075_0074546 3300049591 Bacteria 2567
176 Ga0501076_0008201 3300049592 Bacteria 7652
177 Ga0501076_0010232 3300049592 Bacteria 6953
178 Ga0501076_0061250 3300049592 Bacteria 2995
179 Ga0501077_0002895 3300049593 Bacteria 10290
180 Ga0501079_0000282 3300049741 Bacteria 31362
181 Ga0501079_0001020 3300049741 Bacteria 19446
182 Ga0501080_0039477 3300049742 Bacteria 4406
183 Ga0501081_0002011 3300049743 Bacteria 12661
184 Ga0501081_0004124 3300049743 Bacteria 9309
185 Ga0501081_0105552 3300049743 Bacteria 1996
186 Ga0501083_0014557 3300049744 Bacteria 5499
187 Ga0501044_0036102 3300049823 Bacteria 5172
188 Ga0501045_0000651 3300049824 Bacteria 21998
189 Ga0501045_0132532 3300049824 Bacteria 1853
190 nmdc:mga03683_1242_c1 3300050489 Bacteria 7536
191 nmdc:mga03683_9626_c1 3300050489 Bacteria 3445
192 nmdc:mga0yw44_2706_c1 3300050492 Bacteria 7650
193 nmdc:mga0yw44_3804_c1 3300050492 Bacteria 6775
194 nmdc:mga0yw44_38367_c1 3300050492 Bacteria 2834
195 nmdc:mga0yw44_43000_c1 3300050492 Bacteria 2697
196 nmdc:mga0yw44_6569_c1 3300050492 Bacteria 4804
197 nmdc:mga05p37_20552_c1 3300050507 Bacteria 7988
198 nmdc:mga05p37_65414_c1 3300050507 Bacteria 4473
199 nmdc:mga05p37_85488_c1 3300050507 Bacteria 3887
200 nmdc:mga0qj67_8180_c1 3300050509 Bacteria 7751
201 nmdc:mga06r32_3695_c1 3300050510 Bacteria 13670
202 nmdc:mga06r32_73872_c1 3300050510 Bacteria 3304
203 nmdc:mga08y16_9283_c1 3300050511 Bacteria 10318
204 nmdc:mga0a205_4804_c1 3300050515 Bacteria 12148
205 nmdc:mga0sz30_1007_c1 3300050516 Bacteria 10147
206 nmdc:mga0sz30_7920_c1 3300050516 Bacteria 3998
207 Ga0500581_021566 3300053089 Bacteria 3259
208 Ga0500566_0000118 3300053094 Bacteria 40914
209 Ga0500641_0008737 3300053096 Bacteria 3623
210 Ga0500650_0012542 3300053098 Bacteria 3528
211 Ga0500556_0000003 3300053104 Bacteria 679379
212 Ga0500594_0006204 3300053118 Bacteria 2679
213 Ga0500607_047600 3300053121 Bacteria 2295
214 Ga0500608_001423 3300053122 Bacteria 8559
215 Ga0500618_010811 3300053125 Bacteria 2439
216 Ga0500642_0000006 3300053130 Bacteria 350064
217 Ga0500652_001427 3300053131 Bacteria 7417
218 Ga0500658_0019573 3300053134 Bacteria 2548
219 Ga0500559_0000284 3300053136 Bacteria 39133
220 Ga0500568_0006796 3300053139 Bacteria 5700
221 Ga0500577_0009219 3300053142 Bacteria 2855
222 Ga0500577_0012390 3300053142 Bacteria 2577
223 Ga0500616_0000033 3300053153 Bacteria 398830
224 Ga0500622_0001028 3300053156 Bacteria 23388
225 Ga0500636_0032338 3300053177 Bacteria 3096
226 Ga0501084_0001876 3300054114 Bacteria 16745
227 Ga0501084_0033955 3300054114 Bacteria 4265
228 Ga0501084_0034747 3300054114 Bacteria 4215
229 Ga0501082_0000742 3300060353 Bacteria 28741
230 Ga0501082_0002966 3300060353 Bacteria 14815

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300007265 Ga0099794_10000299 Ga0099794_1000029915 408
2 3300039453 Ga0436362_1197835 Ga0436362_1197835_2425_3951 408
3 3300046543 Ga0495645_0020116 Ga0495645_0020116_20_1336 424
4 3300049572 Ga0501036_0019004 Ga0501036_0019004_3717_5105 427
5 3300049573 Ga0501037_0063021 Ga0501037_0063021_1293_2681 427
6 3300049575 Ga0501039_0012670 Ga0501039_0012670_1306_2694 427
7 3300049576 Ga0501040_0002853 Ga0501040_0002853_8286_9674 427
8 3300049580 Ga0501046_0000849 Ga0501046_0000849_12934_14322 427
9 3300049581 Ga0501047_0112558 Ga0501047_0112558_479_1867 427
10 3300049582 Ga0501048_0031741 Ga0501048_0031741_399_1787 427
11 3300049584 Ga0501068_0040447 Ga0501068_0040447_1383_2771 427
12 3300049587 Ga0501071_0036452 Ga0501071_0036452_342_1730 427
13 3300049588 Ga0501072_0171521 Ga0501072_0171521_206_1594 427
14 3300049590 Ga0501074_0012420 Ga0501074_0012420_597_1985 427
15 3300049592 Ga0501076_0010232 Ga0501076_0010232_5138_6526 427
16 3300049741 Ga0501079_0000282 Ga0501079_0000282_11209_12597 427
17 3300049742 Ga0501080_0039477 Ga0501080_0039477_1721_3109 427
18 3300049743 Ga0501081_0004124 Ga0501081_0004124_5741_7129 427
19 3300049744 Ga0501083_0014557 Ga0501083_0014557_3982_5370 427
20 3300049824 Ga0501045_0000651 Ga0501045_0000651_12733_14121 427
21 3300054114 Ga0501084_0001876 Ga0501084_0001876_12911_14299 427
22 3300060353 Ga0501082_0000742 Ga0501082_0000742_20809_22197 427
23 3300049576 Ga0501040_0047701 Ga0501040_0047701_1425_2831 432
24 3300049591 Ga0501075_0074546 Ga0501075_0074546_182_1588 432
25 3300050507 nmdc:mga05p37_65414_c1 nmdc:mga05p37_65414_c1_1262_2689 437
26 3300006847 Ga0075431_100007609 Ga0075431_1000076096 438
27 3300006880 Ga0075429_100008356 Ga0075429_1000083565 438
28 3300049824 Ga0501045_0132532 Ga0501045_0132532_224_1648 438
29 3300006846 Ga0075430_100017699 Ga0075430_1000176996 439
30 3300005518 Ga0070699_100010785 Ga0070699_1000107852 440
31 3300025922 Ga0207646_10175870 Ga0207646_101758702 440
32 3300050515 nmdc:mga0a205_4804_c1 nmdc:mga0a205_4804_c1_2740_4218 442
33 3300006844 Ga0075428_100014636 Ga0075428_1000146363 443
34 3300006846 Ga0075430_100017009 Ga0075430_1000170096 443
35 3300006847 Ga0075431_100015759 Ga0075431_1000157597 443
36 3300009147 Ga0114129_10019348 Ga0114129_100193482 443
37 3300050507 nmdc:mga05p37_20552_c1 nmdc:mga05p37_20552_c1_2097_3587 443
38 3300009148 Ga0105243_10025297 Ga0105243_100252972 444
39 3300005341 Ga0070691_10007969 Ga0070691_100079692 445
40 3300005438 Ga0070701_10010527 Ga0070701_100105273 445
41 3300005444 Ga0070694_100115064 Ga0070694_1001150642 445
42 3300005467 Ga0070706_100151428 Ga0070706_1001514282 445
43 3300005468 Ga0070707_100084675 Ga0070707_1000846753 445
44 3300005536 Ga0070697_100096765 Ga0070697_1000967652 445
45 3300006871 Ga0075434_100117174 Ga0075434_1001171742 445
46 3300025885 Ga0207653_10011513 Ga0207653_100115132 445
47 3300025922 Ga0207646_10076217 Ga0207646_100762173 445
48 3300026075 Ga0207708_10017764 Ga0207708_100177645 445
49 3300028380 Ga0268265_10056262 Ga0268265_100562622 445
50 3300049591 Ga0501075_0052897 Ga0501075_0052897_642_2126 447
51 3300013307 Ga0157372_10056574 Ga0157372_100565743 448
52 3300045051 Ga0451576_0044155 Ga0451576_0044155_2140_3528 448
53 3300049588 Ga0501072_0004109 Ga0501072_0004109_9469_10983 448
54 3300049591 Ga0501075_0008418 Ga0501075_0008418_1173_2687 448
55 3300049592 Ga0501076_0008201 Ga0501076_0008201_4645_6159 448
56 3300049593 Ga0501077_0002895 Ga0501077_0002895_1342_2856 448
57 3300049741 Ga0501079_0001020 Ga0501079_0001020_1868_3382 448
58 3300049743 Ga0501081_0002011 Ga0501081_0002011_3036_4550 448
59 3300054114 Ga0501084_0033955 Ga0501084_0033955_95_1609 448
60 3300060353 Ga0501082_0002966 Ga0501082_0002966_12570_14084 448
61 3300005468 Ga0070707_100039400 Ga0070707_1000394002 450
62 3300006847 Ga0075431_100077463 Ga0075431_1000774634 450
63 3300027671 Ga0209588_1012040 Ga0209588_10120402 450
64 3300006852 Ga0075433_10077967 Ga0075433_100779672 451
65 3300005840 Ga0068870_10017833 Ga0068870_100178332 453
66 3300006847 Ga0075431_100015550 Ga0075431_1000155502 453
67 3300050510 nmdc:mga06r32_3695_c1 nmdc:mga06r32_3695_c1_5533_7044 453
68 3300025910 Ga0207684_10001199 Ga0207684_1000119911 454
69 3300042461 Ga0439460_0000771 Ga0439460_0000771_4201_5700 456
70 3300050510 nmdc:mga06r32_73872_c1 nmdc:mga06r32_73872_c1_358_1848 462
71 3300003349 JGI26129J50193_1001107 JGI26129J50193_10011071 469
72 3300027665 Ga0209983_1000102 Ga0209983_10001027 469
73 3300027682 Ga0209971_1000085 Ga0209971_10000859 469
74 3300027695 Ga0209966_1000702 Ga0209966_10007027 469
75 3300027717 Ga0209998_10000192 Ga0209998_1000019214 469
76 3300027876 Ga0209974_10000734 Ga0209974_100007348 469
77 3300027364 Ga0209967_1000764 Ga0209967_10007643 472
78 3300027462 Ga0210000_1000613 Ga0210000_10006135 472
79 3300046474 Ga0495605_0002401 Ga0495605_0002401_2496_4064 472
80 3300049460 Ga0495682_0000001 Ga0495682_0000001_302166_303734 472
81 3300049574 Ga0501038_0003457 Ga0501038_0003457_9383_10951 472
82 3300049578 Ga0501042_0002092 Ga0501042_0002092_826_2394 472
83 3300049581 Ga0501047_0002975 Ga0501047_0002975_8495_10063 472
84 3300049582 Ga0501048_0009865 Ga0501048_0009865_4249_5817 472
85 3300049590 Ga0501074_0001158 Ga0501074_0001158_9320_10888 472
86 3300049823 Ga0501044_0036102 Ga0501044_0036102_3062_4630 472
87 3300031595 Ga0265313_10000223 Ga0265313_1000022311 473
88 3300005344 Ga0070661_100005350 Ga0070661_1000053503 475
89 3300025885 Ga0207653_10003967 Ga0207653_100039674 475
90 3300005366 Ga0070659_100062203 Ga0070659_1000622032 487
91 3300006846 Ga0075430_100000451 Ga0075430_10000045114 487
92 3300006847 Ga0075431_100001743 Ga0075431_1000017437 487
93 3300006880 Ga0075429_100105448 Ga0075429_1001054481 487
94 3300009147 Ga0114129_10032296 Ga0114129_100322962 487
95 3300050507 nmdc:mga05p37_85488_c1 nmdc:mga05p37_85488_c1_1874_3385 487
96 3300050509 nmdc:mga0qj67_8180_c1 nmdc:mga0qj67_8180_c1_6001_7512 487
97 3300006844 Ga0075428_100001796 Ga0075428_10000179622 488
98 3300009094 Ga0111539_10028786 Ga0111539_100287865 488
99 3300027907 Ga0207428_10018566 Ga0207428_100185664 488
100 3300050511 nmdc:mga08y16_9283_c1 nmdc:mga08y16_9283_c1_3943_5454 488
101 3300006175 Ga0070712_100000946 Ga0070712_10000094617 490
102 3300025898 Ga0207692_10098398 Ga0207692_100983981 490
103 3300049576 Ga0501040_0053228 Ga0501040_0053228_967_2448 490
104 3300049743 Ga0501081_0105552 Ga0501081_0105552_472_1953 490
105 3300054114 Ga0501084_0034747 Ga0501084_0034747_2307_3788 490
106 3300005467 Ga0070706_100141741 Ga0070706_1001417412 491
107 3300005468 Ga0070707_100006939 Ga0070707_1000069398 491
108 3300025922 Ga0207646_10019689 Ga0207646_100196894 491
109 3300049571 Ga0501034_0002915 Ga0501034_0002915_13525_15042 493
110 3300049584 Ga0501068_0018076 Ga0501068_0018076_567_2084 493
111 3300021388 Ga0213875_10009652 Ga0213875_100096524 494
112 3300031251 Ga0265327_10015631 Ga0265327_100156313 494
113 3300037853 Ga0436364_0022735 Ga0436364_0022735_41534_43069 494
114 3300005564 Ga0070664_100051219 Ga0070664_1000512192 495
115 3300005841 Ga0068863_100195583 Ga0068863_1001955832 495
116 3300013306 Ga0163162_10057523 Ga0163162_100575232 495
117 3300025933 Ga0207706_10027191 Ga0207706_100271915 495
118 3300025938 Ga0207704_10073693 Ga0207704_100736932 495
119 3300025972 Ga0207668_10030223 Ga0207668_100302233 495
120 3300037418 Ga0395900_0014623 Ga0395900_0014623_1806_3326 495
121 3300038443 Ga0395901_0001945 Ga0395901_0001945_12426_13946 495
122 3300049592 Ga0501076_0061250 Ga0501076_0061250_240_1748 495
123 3300006186 Ga0075369_10000609 Ga0075369_100006099 496
124 3300032002 Ga0307416_100243011 Ga0307416_1002430112 496
125 3300050489 nmdc:mga03683_1242_c1 nmdc:mga03683_1242_c1_3323_4849 496
126 3300050492 nmdc:mga0yw44_38367_c1 nmdc:mga0yw44_38367_c1_784_2310 496
127 3300050516 nmdc:mga0sz30_1007_c1 nmdc:mga0sz30_1007_c1_1206_2732 496
128 iso_pu_bacteria 2855730933 2855731907 497
129 iso_pu_bacteria 2855767633 2855768614 497
130 3300006042 Ga0075368_10004542 Ga0075368_100045423 498
131 3300006048 Ga0075363_100013129 Ga0075363_1000131294 498
132 3300006051 Ga0075364_10028755 Ga0075364_100287553 498
133 3300006177 Ga0075362_10018171 Ga0075362_100181712 498
134 3300006195 Ga0075366_10023922 Ga0075366_100239224 498
135 3300009148 Ga0105243_10051124 Ga0105243_100511244 498
136 3300050489 nmdc:mga03683_9626_c1 nmdc:mga03683_9626_c1_1674_3203 498
137 3300050492 nmdc:mga0yw44_2706_c1 nmdc:mga0yw44_2706_c1_5190_6719 498
138 3300050492 nmdc:mga0yw44_6569_c1 nmdc:mga0yw44_6569_c1_417_1946 498
139 iso_pu_bacteria 2508501128 2509147719 498
140 iso_pu_bacteria 2513237098 2513671362 498
141 iso_pu_bacteria 2602042107 2603860234 498
142 iso_pu_bacteria 2857524615 2857525245 498
143 iso_pu_bacteria 2885383462 2885385743 498
144 iso_pu_bacteria 2893066018 2893066580 498
145 iso_pu_bacteria 2903768456 2903768772 498
146 iso_pu_bacteria 2919073203 2919075092 498
147 iso_pu_bacteria 2857576091 2857580245 499
148 3300031235 Ga0265330_10004734 Ga0265330_100047345 500
149 3300031247 Ga0265340_10000767 Ga0265340_100007678 500
150 3300031616 Ga0307508_10037284 Ga0307508_100372842 500
151 3300035410 Ga0373924_0024775 Ga0373924_0024775_604_2160 500
152 3300036401 Ga0373937_0097183 Ga0373937_0097183_424_1980 500
153 3300046454 Ga0495592_0013901 Ga0495592_0013901_4357_5913 500
154 3300046462 Ga0495651_0098158 Ga0495651_0098158_207_1763 500
155 3300046463 Ga0495653_0062609 Ga0495653_0062609_319_1875 500
156 3300046477 Ga0495664_0024281 Ga0495664_0024281_1192_2748 500
157 3300046511 Ga0495608_0021533 Ga0495608_0021533_525_2081 500
158 3300046514 Ga0495618_0025994 Ga0495618_0025994_1000_2556 500
159 3300046663 Ga0495635_0009394 Ga0495635_0009394_4331_5887 500
160 3300047471 Ga0495684_0096197 Ga0495684_0096197_190_1746 500
161 iso_pu_bacteria 2511231026 2511384124 500
162 iso_pu_bacteria 2643221569 2643859898 500
163 iso_pu_bacteria 2858950400 2858951489 500
164 iso_pu_bacteria 2941479691 2941482983 500
165 3300005289 Ga0065704_10113198 Ga0065704_101131982 501
166 3300048925 Ga0496122_0004114 Ga0496122_0004114_6886_8424 501
167 3300048926 Ga0496123_0027220 Ga0496123_0027220_1687_3225 501
168 3300048927 Ga0496124_0088167 Ga0496124_0088167_643_2154 501
169 3300048928 Ga0496125_0001721 Ga0496125_0001721_14485_16023 501
170 3300048929 Ga0496126_0007755 Ga0496126_0007755_3233_4771 501
171 3300050492 nmdc:mga0yw44_3804_c1 nmdc:mga0yw44_3804_c1_5187_6692 501
172 iso_pu_bacteria 2513237087 2513589205 501
173 3300003215 JGI25153J46596_10000700 JGI25153J46596_100007003 502
174 3300005436 Ga0070713_100004238 Ga0070713_1000042386 502
175 3300005436 Ga0070713_100054089 Ga0070713_1000540891 502
176 3300005546 Ga0070696_100002926 Ga0070696_10000292612 502
177 3300006028 Ga0070717_10003899 Ga0070717_100038999 502
178 3300006028 Ga0070717_10008543 Ga0070717_100085432 502
179 3300006038 Ga0075365_10019588 Ga0075365_100195883 502
180 3300009093 Ga0105240_10044694 Ga0105240_100446942 502
181 3300025297 Ga0209758_1001682 Ga0209758_100168217 502
182 3300025298 Ga0209050_1001827 Ga0209050_100182710 502
183 3300025928 Ga0207700_10010797 Ga0207700_100107973 502
184 3300026067 Ga0207678_10024752 Ga0207678_100247522 502
185 3300032005 Ga0307411_10118508 Ga0307411_101185082 502
186 3300037471 Ga0395905_0099698 Ga0395905_0099698_820_2331 502
187 3300039437 Ga0436365_1859117 Ga0436365_1859117_1711_3219 502
188 3300039447 Ga0436361_0418486 Ga0436361_0418486_8196_9704 502
189 3300044656 Ga0466969_0018673 Ga0466969_0018673_754_2376 502
190 3300044666 Ga0466977_0009365 Ga0466977_0009365_597_2159 502
191 3300046460 Ga0495638_0024382 Ga0495638_0024382_2214_3722 502
192 3300046501 Ga0495607_0018182 Ga0495607_0018182_515_2023 502
193 3300046512 Ga0495610_0020593 Ga0495610_0020593_500_2008 502
194 3300046515 Ga0495620_0014148 Ga0495620_0014148_793_2301 502
195 3300046524 Ga0495648_0001073 Ga0495648_0001073_4385_5893 502
196 3300046530 Ga0495654_0010546 Ga0495654_0010546_2962_4470 502
197 3300046660 Ga0495625_0059061 Ga0495625_0059061_1034_2542 502
198 3300046665 Ga0495661_0010961 Ga0495661_0010961_3226_4734 502
199 3300046810 Ga0495660_0050131 Ga0495660_0050131_29_1537 502
200 3300047320 Ga0495672_0036308 Ga0495672_0036308_1197_2780 502
201 3300047472 Ga0495686_0021580 Ga0495686_0021580_2241_3749 502
202 3300047472 Ga0495686_0069923 Ga0495686_0069923_21_1532 502
203 3300048907 Ga0496104_0028647 Ga0496104_0028647_3336_4868 502
204 3300048908 Ga0496105_0036139 Ga0496105_0036139_465_1997 502
205 3300048919 Ga0496116_0001130 Ga0496116_0001130_29705_31246 502
206 3300048919 Ga0496116_0004624 Ga0496116_0004624_339_1847 502
207 3300048919 Ga0496116_0007940 Ga0496116_0007940_1841_3382 502
208 3300048919 Ga0496116_0008054 Ga0496116_0008054_1287_2795 502
209 3300048920 Ga0496117_0015433 Ga0496117_0015433_1597_3105 502
210 3300048921 Ga0496118_0044403 Ga0496118_0044403_842_2383 502
211 3300048921 Ga0496118_0044757 Ga0496118_0044757_1216_2724 502
212 3300048923 Ga0496120_0051417 Ga0496120_0051417_573_2114 502
213 3300048924 Ga0496121_0000159 Ga0496121_0000159_25849_27390 502
214 3300048924 Ga0496121_0008801 Ga0496121_0008801_1193_2701 502
215 3300048924 Ga0496121_0032379 Ga0496121_0032379_589_2097 502
216 3300048925 Ga0496122_0000017 Ga0496122_0000017_336367_337908 502
217 3300048925 Ga0496122_0015066 Ga0496122_0015066_1915_3423 502
218 3300048925 Ga0496122_0078166 Ga0496122_0078166_91_1599 502
219 3300048926 Ga0496123_0000033 Ga0496123_0000033_100525_102066 502
220 3300048926 Ga0496123_0005361 Ga0496123_0005361_2139_3647 502
221 3300048927 Ga0496124_0107111 Ga0496124_0107111_271_1779 502
222 3300048928 Ga0496125_0000005 Ga0496125_0000005_623161_624702 502
223 3300048928 Ga0496125_0006333 Ga0496125_0006333_4196_5704 502
224 3300048928 Ga0496125_0006907 Ga0496125_0006907_7065_8573 502
225 3300048928 Ga0496125_0023014 Ga0496125_0023014_2436_3977 502
226 3300050492 nmdc:mga0yw44_43000_c1 nmdc:mga0yw44_43000_c1_599_2107 502
227 3300050516 nmdc:mga0sz30_7920_c1 nmdc:mga0sz30_7920_c1_1206_2714 502
228 3300053089 Ga0500581_021566 Ga0500581_021566_578_2086 502
229 3300053094 Ga0500566_0000118 Ga0500566_0000118_31641_33149 502
230 3300053096 Ga0500641_0008737 Ga0500641_0008737_2003_3511 502
231 3300053098 Ga0500650_0012542 Ga0500650_0012542_1034_2542 502
232 3300053104 Ga0500556_0000003 Ga0500556_0000003_255194_256702 502
233 3300053118 Ga0500594_0006204 Ga0500594_0006204_1052_2560 502
234 3300053121 Ga0500607_047600 Ga0500607_047600_491_1999 502
235 3300053122 Ga0500608_001423 Ga0500608_001423_3297_4805 502
236 3300053125 Ga0500618_010811 Ga0500618_010811_495_2003 502
237 3300053130 Ga0500642_0000006 Ga0500642_0000006_236806_238314 502
238 3300053131 Ga0500652_001427 Ga0500652_001427_2020_3528 502
239 3300053134 Ga0500658_0019573 Ga0500658_0019573_493_2001 502
240 3300053136 Ga0500559_0000284 Ga0500559_0000284_4009_5517 502
241 3300053139 Ga0500568_0006796 Ga0500568_0006796_3636_5144 502
242 3300053142 Ga0500577_0009219 Ga0500577_0009219_511_2019 502
243 3300053142 Ga0500577_0012390 Ga0500577_0012390_273_1781 502
244 3300053153 Ga0500616_0000033 Ga0500616_0000033_268260_269768 502
245 3300053156 Ga0500622_0001028 Ga0500622_0001028_20597_22105 502
246 3300053177 Ga0500636_0032338 Ga0500636_0032338_123_1631 502

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

430

505

0.96

PF00501

AMP-binding

AMP-binding enzyme

35

380

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p2q-assembly1.cif.gz_A acetyl-coa synthetase, r584e mutation 0.8965 5 490
2p20-assembly1.cif.gz_A acetyl-coa synthetase, r584a mutation 0.8962 5 490
2p2j-assembly1.cif.gz_A acetyl-coa synthetase, k609a mutation 0.8958 5 492
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.8955 16 489
2p2m-assembly1.cif.gz_A acetyl-coa synthetase, r194a mutation 0.8955 5 490
ID Description Score Start End Superfamily
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9633 393 486 3.30.300.30
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9573 392 489 3.30.300.30
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9555 396 455 3.30.300.30
af_Q9XV68_424_526_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.947 393 492 3.30.300.30
5buqA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9465 392 472 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9567 391 497 GO:0006631
GO:0031956
AF-A0A2K3LEK0-F1-model_v4 4-coumarate-CoA ligase 7-like protein 0.9157 401 495 GO:0016405
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9154 391 497 GO:0006631
GO:0031956
AF-A0A0U1DM87-F1-model_v4 Long-chain-fatty-acid-CoA ligase 0.9125 387 495 GO:0006631
GO:0031956
AF-A0A838KQ73-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9095 389 495 GO:0016877

Feature Viewer

pLDDT pTM Quality
91.26 0.89 High
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Predicted Structure (AlphaFold2)

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