F358274

General Info

Members Datasets Scaffolds Average Seq Length
246 145 246 232

Family's Representative Sequence

Representative Sequence 3300031249|Ga0265339_10048061|Ga0265339_100480612
Length 259
Sequence VRAAFRIGTFGGQGTARPTFNSCPSVVEFMKTKILIVEDDAHILLGLEEVLKSEGYDVASCNRGDQAVGAVARYQPALVVLDVMLPGLSGYDICKQLRAKKVAVPILMLTAKGQELDKVIGLDLGADDYVTKPFGVRELLARIQALLRRTGKTGDPAASEDVFQIGSATIDPKTFQVKRGKTVVELTAKELKLLQVFHARAGEVLSRDKLLNEVWGYNYYGTTRTLDQVIVQLRKKLGDHGSEPKHLLTIHGVGYKLVA

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
78 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
79 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
80 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
96 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
97 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
98 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
99 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
100 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
101 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
102 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 0.41
Rhizosphere 98.37
Stem 0
Stem Tuber 0
Unclassified 0.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10148810 3300003320 Bacteria 8635
2 rootL2_10162825 3300003322 Bacteria 7494
3 Ga0065712_10113521 3300005290 Bacteria 1781
4 Ga0070680_100546545 3300005336 Bacteria 993
5 Ga0068868_100353887 3300005338 Bacteria 1258
6 Ga0070660_100148944 3300005339 Bacteria 1881
7 Ga0070689_100010354 3300005340 Bacteria 6648
8 Ga0070689_100106113 3300005340 Bacteria 2228
9 Ga0070689_100111160 3300005340 Bacteria 2179
10 Ga0070689_100360022 3300005340 Bacteria 1222
11 Ga0070687_100090761 3300005343 Bacteria 1689
12 Ga0070675_100001840 3300005354 Bacteria 15660
13 Ga0070673_100215432 3300005364 Bacteria 1660
14 Ga0070688_100027314 3300005365 Bacteria 3399
15 Ga0070688_100229483 3300005365 Bacteria 1312
16 Ga0070667_100561828 3300005367 Bacteria 1049
17 Ga0070714_100045231 3300005435 Bacteria 3730
18 Ga0070713_100617050 3300005436 Bacteria 1031
19 Ga0070701_10037869 3300005438 Bacteria 2437
20 Ga0070701_10124449 3300005438 Bacteria 1457
21 Ga0070711_100002192 3300005439 Bacteria 11087
22 Ga0070694_100485086 3300005444 Bacteria 981
23 Ga0070708_100260664 3300005445 Bacteria 1630
24 Ga0070685_10013228 3300005466 Unclassified 4348
25 Ga0070685_10300073 3300005466 Bacteria 1082
26 Ga0070685_10376452 3300005466 Bacteria 977
27 Ga0070707_100912228 3300005468 Bacteria 843
28 Ga0070679_100410645 3300005530 Bacteria 1299
29 Ga0070684_100184201 3300005535 Bacteria 1899
30 Ga0070684_100462256 3300005535 Bacteria 1173
31 Ga0070686_100179023 3300005544 Bacteria 1505
32 Ga0070686_100343763 3300005544 Bacteria 1119
33 Ga0070704_100393133 3300005549 Bacteria 1181
34 Ga0068855_100061209 3300005563 Bacteria 4399
35 Ga0068855_100906960 3300005563 Bacteria 931
36 Ga0068856_100046798 3300005614 Bacteria 4261
37 Ga0068856_100106201 3300005614 Bacteria 2802
38 Ga0068856_100324098 3300005614 Bacteria 1558
39 Ga0068856_100379132 3300005614 Bacteria 1433
40 Ga0068859_100017089 3300005617 Bacteria 7284
41 Ga0068859_100047652 3300005617 Bacteria 4306
42 Ga0068859_100339172 3300005617 Bacteria 1597
43 Ga0068859_100627532 3300005617 Bacteria 1167
44 Ga0068864_100281435 3300005618 Bacteria 1552
45 Ga0068861_100293303 3300005719 Bacteria 1405
46 Ga0068861_100433154 3300005719 Bacteria 1174
47 Ga0068863_100199103 3300005841 Bacteria 1926
48 Ga0068863_100290172 3300005841 Bacteria 1586
49 Ga0068863_100785678 3300005841 Bacteria 949
50 Ga0068858_100433446 3300005842 Bacteria 1265
51 Ga0068858_100566454 3300005842 Bacteria 1100
52 Ga0068860_100887854 3300005843 Bacteria 907
53 Ga0068862_100245629 3300005844 Bacteria 1629
54 Ga0081455_10090619 3300005937 Bacteria 2478
55 Ga0070712_100031996 3300006175 Bacteria 3549
56 Ga0097621_100096266 3300006237 Bacteria 2484
57 Ga0075428_101062343 3300006844 Bacteria 856
58 Ga0075430_100727819 3300006846 Bacteria 818
59 Ga0075431_100091569 3300006847 Bacteria 3138
60 Ga0075434_100719953 3300006871 Bacteria 1015
61 Ga0075429_100021187 3300006880 Bacteria 5635
62 Ga0075429_100501226 3300006880 Bacteria 1064
63 Ga0075429_100647146 3300006880 Bacteria 926
64 Ga0075436_100133421 3300006914 Bacteria 1742
65 Ga0097620_100017089 3300006931 Bacteria 7284
66 Ga0097620_100047652 3300006931 Bacteria 4306
67 Ga0097620_100339140 3300006931 Bacteria 1597
68 Ga0097620_100627436 3300006931 Bacteria 1167
69 Ga0105240_10000618 3300009093 Bacteria 65886
70 Ga0105240_10048613 3300009093 Bacteria 5360
71 Ga0105240_10246722 3300009093 Bacteria 2067
72 Ga0105240_10277708 3300009093 Bacteria 1926
73 Ga0111539_10120185 3300009094 Bacteria 3078
74 Ga0111539_10125662 3300009094 Bacteria 3005
75 Ga0111539_10256071 3300009094 Bacteria 2038
76 Ga0105245_10482843 3300009098 Bacteria 1253
77 Ga0105248_10900087 3300009177 Bacteria 999
78 Ga0105238_10001646 3300009551 Bacteria 22395
79 Ga0105238_10001809 3300009551 Bacteria 21424
80 Ga0105238_10142891 3300009551 Bacteria 2370
81 Ga0157370_10015323 3300013104 Bacteria 7797
82 Ga0157370_10479858 3300013104 Bacteria 1142
83 Ga0157374_10019746 3300013296 Bacteria 5970
84 Ga0157374_10184202 3300013296 Bacteria 2041
85 Ga0157378_11098346 3300013297 Bacteria 832
86 Ga0157372_10426953 3300013307 Bacteria 1545
87 Ga0157372_11601753 3300013307 Bacteria 750
88 Ga0163163_10000083 3300014325 Bacteria 104503
89 Ga0163163_10129259 3300014325 Bacteria 2566
90 Ga0163163_10600451 3300014325 Bacteria 1164
91 Ga0157379_10190218 3300014968 Bacteria 1855
92 Ga0157376_10247754 3300014969 Bacteria 1663
93 Ga0157376_10467673 3300014969 Bacteria 1233
94 Ga0207707_10075934 3300025912 Bacteria 2932
95 Ga0207695_10000022 3300025913 Bacteria 659090
96 Ga0207695_10059235 3300025913 Bacteria 3972
97 Ga0207695_10463887 3300025913 Bacteria 1149
98 Ga0207663_10031879 3300025916 Bacteria 3124
99 Ga0207657_10260533 3300025919 Bacteria 1380
100 Ga0207652_10497130 3300025921 Bacteria 1098
101 Ga0207646_10724647 3300025922 Bacteria 888
102 Ga0207694_10008081 3300025924 Bacteria 7951
103 Ga0207694_10011700 3300025924 Bacteria 6619
104 Ga0207659_10001739 3300025926 Bacteria 12916
105 Ga0207700_10662717 3300025928 Bacteria 931
106 Ga0207664_10060888 3300025929 Bacteria 3010
107 Ga0207670_10006185 3300025936 Bacteria 6623
108 Ga0207670_10008040 3300025936 Bacteria 5929
109 Ga0207670_10008588 3300025936 Bacteria 5773
110 Ga0207670_10015117 3300025936 Bacteria 4603
111 Ga0207670_10017989 3300025936 Bacteria 4283
112 Ga0207670_10089301 3300025936 Bacteria 2175
113 Ga0207670_10324072 3300025936 Bacteria 1213
114 Ga0207711_10402384 3300025941 Bacteria 1272
115 Ga0207711_10512374 3300025941 Bacteria 1118
116 Ga0207667_10106303 3300025949 Unclassified 2895
117 Ga0207651_10439757 3300025960 Bacteria 1117
118 Ga0207703_10233055 3300026035 Bacteria 1652
119 Ga0207703_10575257 3300026035 Bacteria 1064
120 Ga0207639_10246235 3300026041 Bacteria 1557
121 Ga0207708_10642463 3300026075 Bacteria 903
122 Ga0207702_10009697 3300026078 Bacteria 8086
123 Ga0207702_10080488 3300026078 Bacteria 2826
124 Ga0207702_10252684 3300026078 Bacteria 1656
125 Ga0207641_10096087 3300026088 Bacteria 2602
126 Ga0207676_10640908 3300026095 Bacteria 1024
127 Ga0207675_100231682 3300026118 Bacteria 1782
128 Ga0207675_100428230 3300026118 Bacteria 1308
129 Ga0265337_1001373 3300028556 Bacteria 11976
130 Ga0265337_1001455 3300028556 Bacteria 11610
131 Ga0265337_1002115 3300028556 Bacteria 9370
132 Ga0265337_1013129 3300028556 Bacteria 2793
133 Ga0265334_10010873 3300028573 Bacteria 3842
134 Ga0265334_10016969 3300028573 Bacteria 3011
135 Ga0265318_10020704 3300028577 Bacteria 2651
136 Ga0265336_10000507 3300028666 Bacteria 22737
137 Ga0265338_10000008 3300028800 Bacteria 481542
138 Ga0265338_10000552 3300028800 Bacteria 65513
139 Ga0265338_10001835 3300028800 Bacteria 33316
140 Ga0265338_10002101 3300028800 Bacteria 30750
141 Ga0265338_10002784 3300028800 Bacteria 25558
142 Ga0265338_10002935 3300028800 Bacteria 24739
143 Ga0265338_10004643 3300028800 Bacteria 18461
144 Ga0265338_10026280 3300028800 Bacteria 5879
145 Ga0265338_10099492 3300028800 Bacteria 2375
146 Ga0265338_10106978 3300028800 Bacteria 2263
147 Ga0265338_10122253 3300028800 Bacteria 2072
148 Ga0265338_10130497 3300028800 Bacteria 1985
149 Ga0265338_10304311 3300028800 Bacteria 1158
150 Ga0265324_10001087 3300029957 Bacteria 16364
151 Ga0265324_10014590 3300029957 Bacteria 2904
152 Ga0265324_10023132 3300029957 Bacteria 2216
153 Ga0265324_10075241 3300029957 Bacteria 1149
154 Ga0265320_10002014 3300031240 Bacteria 14348
155 Ga0265320_10009715 3300031240 Bacteria 5775
156 Ga0265320_10016470 3300031240 Bacteria 4140
157 Ga0265320_10042770 3300031240 Bacteria 2245
158 Ga0265325_10198569 3300031241 Bacteria 926
159 Ga0265340_10007548 3300031247 Bacteria 5900
160 Ga0265340_10050055 3300031247 Bacteria 2028
161 Ga0265339_10048061 3300031249 Bacteria 2341
162 Ga0265339_10122531 3300031249 Bacteria 1335
163 Ga0265327_10001028 3300031251 Bacteria 39368
164 Ga0265316_10088856 3300031344 Bacteria 2359
165 Ga0316579_10004836 3300031691 Bacteria 5385
166 Ga0316579_10097112 3300031691 Bacteria 1409
167 Ga0265314_10048712 3300031711 Bacteria 2971
168 Ga0265342_10115297 3300031712 Bacteria 1517
169 Ga0316576_10199410 3300031727 Bacteria 1508
170 Ga0316578_10064697 3300031728 Bacteria 2158
171 Ga0316577_10000977 3300031733 Bacteria 12771
172 Ga0316577_10013442 3300031733 Bacteria 4474
173 Ga0373930_0014448 3300034816 Bacteria 1470
174 Ga0373928_0000288 3300035084 Bacteria 9958
175 Ga0373929_0097426 3300035085 Bacteria 737
176 Ga0373944_0000165 3300035089 Bacteria 13307
177 Ga0373951_0038117 3300035091 Bacteria 1151
178 Ga0373932_0000002 3300035112 Bacteria 711821
179 Ga0373945_0006126 3300035116 Bacteria 3868
180 Ga0373954_0012906 3300035118 Bacteria 3720
181 Ga0373946_0039825 3300035171 Bacteria 1920
182 Ga0373962_0000280 3300035242 Bacteria 10990
183 Ga0373931_0000012 3300035691 Bacteria 267735
184 Ga0373935_0193782 3300035692 Bacteria 1401
185 Ga0373937_0021627 3300036401 Bacteria 5773
186 Ga0373937_0144703 3300036401 Bacteria 2225
187 Ga0373937_0358723 3300036401 Bacteria 1381
188 Ga0316584_0057449 3300036712 Bacteria 2913
189 Ga0373925_0001369 3300037068 Bacteria 21260
190 Ga0373925_0040464 3300037068 Bacteria 3451
191 Ga0451577_0000963 3300042876 Bacteria 42128
192 Ga0453684_0002961 3300044712 Bacteria 39757
193 Ga0453684_0016394 3300044712 Bacteria 11589
194 Ga0451576_0037759 3300045051 Bacteria 5115
195 Ga0451576_0095641 3300045051 Bacteria 3090
196 Ga0451576_0183836 3300045051 Bacteria 2182
197 Ga0451576_0394263 3300045051 Bacteria 1451
198 Ga0451576_0557693 3300045051 Bacteria 1204
199 Ga0451576_0666673 3300045051 Bacteria 1093
200 Ga0451576_1004623 3300045051 Bacteria 874
201 Ga0451576_1312664 3300045051 Bacteria 754
202 Ga0495592_0000052 3300046454 Bacteria 109203
203 Ga0495592_0021991 3300046454 Bacteria 4853
204 Ga0495582_0150915 3300046473 Bacteria 1319
205 Ga0495664_0079275 3300046477 Bacteria 1968
206 Ga0495608_0540271 3300046511 Bacteria 703
207 Ga0495618_0006173 3300046514 Bacteria 7270
208 Ga0495628_0000331 3300046516 Bacteria 42855
209 Ga0495628_0132808 3300046516 Bacteria 1903
210 Ga0495628_0589372 3300046516 Bacteria 795
211 Ga0495630_0004361 3300046517 Bacteria 9936
212 Ga0495666_0088041 3300046526 Bacteria 1467
213 Ga0495666_0180997 3300046526 Bacteria 973
214 Ga0495652_0159479 3300046529 Bacteria 1753
215 Ga0495640_0207758 3300046533 Bacteria 1239
216 Ga0495586_0001856 3300046535 Bacteria 11505
217 Ga0495586_0002328 3300046535 Bacteria 10332
218 Ga0495645_0071232 3300046543 Bacteria 2507
219 Ga0495645_0149900 3300046543 Bacteria 1621
220 Ga0495645_0207979 3300046543 Bacteria 1323
221 Ga0495667_0120993 3300046559 Unclassified 1690
222 Ga0495634_0225983 3300046642 Bacteria 1153
223 Ga0495635_0331994 3300046663 Bacteria 1016
224 Ga0495599_0007726 3300046678 Bacteria 6531
225 Ga0495599_0015692 3300046678 Bacteria 4701
226 Ga0495599_0092418 3300046678 Bacteria 1888
227 Ga0495647_0038437 3300046681 Bacteria 1810
228 Ga0495658_0069132 3300046683 Bacteria 2046
229 Ga0495613_0560695 3300046689 Unclassified 763
230 Ga0495600_0333050 3300046809 Bacteria 953
231 Ga0495581_0330369 3300047315 Bacteria 890
232 Ga0495604_0261189 3300047317 Bacteria 1177
233 Ga0495674_0016633 3300047319 Bacteria 6863
234 Ga0495674_0111956 3300047319 Bacteria 2313
235 Ga0495675_0288383 3300047444 Bacteria 977
236 Ga0495684_0166838 3300047471 Bacteria 1640
237 Ga0496115_0003448 3300048918 Bacteria 11357
238 nmdc:mga09592_304781_c1 3300050508 Bacteria 1381
239 nmdc:mga09592_432946_c1 3300050508 Bacteria 1135
240 nmdc:mga0qj67_430583_c1 3300050509 Bacteria 1063
241 nmdc:mga06r32_11382_c1 3300050510 Bacteria 8012
242 nmdc:mga06r32_52412_c1 3300050510 Bacteria 2765
243 nmdc:mga08y16_174698_c1 3300050511 Bacteria 2230
244 nmdc:mga08x19_82265_c1 3300050514 Bacteria 2115
245 nmdc:mga0a205_518678_c1 3300050515 Bacteria 1048
246 Ga0500650_0130756 3300053098 Bacteria 1167

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10000618 Ga0105240_1000061820 212
2 3300005617 Ga0068859_100627532 Ga0068859_1006275322 215
3 3300006931 Ga0097620_100627436 Ga0097620_1006274362 215
4 3300028800 Ga0265338_10099492 Ga0265338_100994922 215
5 3300028577 Ga0265318_10020704 Ga0265318_100207042 217
6 3300046511 Ga0495608_0540271 Ga0495608_0540271_40_693 217
7 3300046533 Ga0495640_0207758 Ga0495640_0207758_10_663 217
8 3300028573 Ga0265334_10016969 Ga0265334_100169691 219
9 3300028800 Ga0265338_10122253 Ga0265338_101222532 219
10 3300046516 Ga0495628_0589372 Ga0495628_0589372_37_702 219
11 3300046543 Ga0495645_0207979 Ga0495645_0207979_544_1209 219
12 3300025941 Ga0207711_10402384 Ga0207711_104023842 223
13 3300005290 Ga0065712_10113521 Ga0065712_101135212 224
14 3300005338 Ga0068868_100353887 Ga0068868_1003538872 224
15 3300005354 Ga0070675_100001840 Ga0070675_1000018405 224
16 3300005364 Ga0070673_100215432 Ga0070673_1002154322 224
17 3300005367 Ga0070667_100561828 Ga0070667_1005618281 224
18 3300005466 Ga0070685_10013228 Ga0070685_100132281 224
19 3300005617 Ga0068859_100047652 Ga0068859_1000476523 224
20 3300005719 Ga0068861_100293303 Ga0068861_1002933032 224
21 3300005844 Ga0068862_100245629 Ga0068862_1002456291 224
22 3300006237 Ga0097621_100096266 Ga0097621_1000962661 224
23 3300006931 Ga0097620_100047652 Ga0097620_1000476523 224
24 3300009098 Ga0105245_10482843 Ga0105245_104828432 224
25 3300014325 Ga0163163_10600451 Ga0163163_106004512 224
26 3300014969 Ga0157376_10467673 Ga0157376_104676732 224
27 3300025913 Ga0207695_10000022 Ga0207695_10000022161 224
28 3300025926 Ga0207659_10001739 Ga0207659_100017399 224
29 3300025928 Ga0207700_10662717 Ga0207700_106627171 224
30 3300025936 Ga0207670_10008040 Ga0207670_100080407 224
31 3300025941 Ga0207711_10512374 Ga0207711_105123742 224
32 3300025960 Ga0207651_10439757 Ga0207651_104397572 224
33 3300026095 Ga0207676_10640908 Ga0207676_106409082 224
34 3300026118 Ga0207675_100231682 Ga0207675_1002316822 224
35 3300028800 Ga0265338_10130497 Ga0265338_101304972 224
36 3300031240 Ga0265320_10042770 Ga0265320_100427702 224
37 3300036401 Ga0373937_0021627 Ga0373937_0021627_4067_4756 224
38 3300031691 Ga0316579_10004836 Ga0316579_100048362 225
39 3300031691 Ga0316579_10097112 Ga0316579_100971122 225
40 3300031727 Ga0316576_10199410 Ga0316576_101994101 225
41 3300031728 Ga0316578_10064697 Ga0316578_100646972 225
42 3300031733 Ga0316577_10000977 Ga0316577_100009774 225
43 3300031733 Ga0316577_10013442 Ga0316577_100134422 225
44 3300036712 Ga0316584_0057449 Ga0316584_0057449_887_1657 225
45 3300006880 Ga0075429_100647146 Ga0075429_1006471462 227
46 3300050508 nmdc:mga09592_432946_c1 nmdc:mga09592_432946_c1_395_1081 227
47 3300050511 nmdc:mga08y16_174698_c1 nmdc:mga08y16_174698_c1_46_732 227
48 3300006844 Ga0075428_101062343 Ga0075428_1010623431 228
49 3300006847 Ga0075431_100091569 Ga0075431_1000915692 228
50 3300009094 Ga0111539_10120185 Ga0111539_101201853 228
51 3300013297 Ga0157378_11098346 Ga0157378_110983462 228
52 3300026075 Ga0207708_10642463 Ga0207708_106424632 228
53 3300045051 Ga0451576_0666673 Ga0451576_0666673_125_811 228
54 3300050510 nmdc:mga06r32_11382_c1 nmdc:mga06r32_11382_c1_4304_4990 228
55 3300003322 rootL2_10162825 rootL2_101628257 229
56 3300005340 Ga0070689_100111160 Ga0070689_1001111602 229
57 3300005343 Ga0070687_100090761 Ga0070687_1000907612 229
58 3300005438 Ga0070701_10037869 Ga0070701_100378691 229
59 3300005444 Ga0070694_100485086 Ga0070694_1004850862 229
60 3300005468 Ga0070707_100912228 Ga0070707_1009122281 229
61 3300005530 Ga0070679_100410645 Ga0070679_1004106452 229
62 3300005544 Ga0070686_100343763 Ga0070686_1003437631 229
63 3300005549 Ga0070704_100393133 Ga0070704_1003931331 229
64 3300005617 Ga0068859_100339172 Ga0068859_1003391722 229
65 3300006880 Ga0075429_100501226 Ga0075429_1005012261 229
66 3300006931 Ga0097620_100339140 Ga0097620_1003391402 229
67 3300009093 Ga0105240_10048613 Ga0105240_100486132 229
68 3300025913 Ga0207695_10059235 Ga0207695_100592355 229
69 3300025921 Ga0207652_10497130 Ga0207652_104971301 229
70 3300025922 Ga0207646_10724647 Ga0207646_107246471 229
71 3300025936 Ga0207670_10089301 Ga0207670_100893011 229
72 3300028573 Ga0265334_10010873 Ga0265334_100108732 229
73 3300028800 Ga0265338_10000008 Ga0265338_10000008413 229
74 3300028800 Ga0265338_10000552 Ga0265338_1000055254 229
75 3300028800 Ga0265338_10001835 Ga0265338_1000183523 229
76 3300028800 Ga0265338_10304311 Ga0265338_103043112 229
77 3300029957 Ga0265324_10001087 Ga0265324_1000108715 229
78 3300029957 Ga0265324_10014590 Ga0265324_100145902 229
79 3300029957 Ga0265324_10075241 Ga0265324_100752412 229
80 3300031249 Ga0265339_10122531 Ga0265339_101225312 229
81 3300042876 Ga0451577_0000963 Ga0451577_0000963_32567_33262 229
82 3300044712 Ga0453684_0002961 Ga0453684_0002961_19667_20362 229
83 3300044712 Ga0453684_0016394 Ga0453684_0016394_8506_9195 229
84 3300005340 Ga0070689_100010354 Ga0070689_1000103543 230
85 3300005365 Ga0070688_100229483 Ga0070688_1002294831 230
86 3300005439 Ga0070711_100002192 Ga0070711_1000021925 230
87 3300005535 Ga0070684_100462256 Ga0070684_1004622562 230
88 3300005563 Ga0068855_100061209 Ga0068855_1000612092 230
89 3300005614 Ga0068856_100106201 Ga0068856_1001062012 230
90 3300005614 Ga0068856_100324098 Ga0068856_1003240982 230
91 3300005841 Ga0068863_100199103 Ga0068863_1001991032 230
92 3300005937 Ga0081455_10090619 Ga0081455_100906193 230
93 3300006175 Ga0070712_100031996 Ga0070712_1000319963 230
94 3300006846 Ga0075430_100727819 Ga0075430_1007278191 230
95 3300006871 Ga0075434_100719953 Ga0075434_1007199532 230
96 3300009177 Ga0105248_10900087 Ga0105248_109000871 230
97 3300009551 Ga0105238_10001646 Ga0105238_100016464 230
98 3300009551 Ga0105238_10001809 Ga0105238_1000180915 230
99 3300013296 Ga0157374_10019746 Ga0157374_100197464 230
100 3300025916 Ga0207663_10031879 Ga0207663_100318792 230
101 3300025924 Ga0207694_10008081 Ga0207694_100080816 230
102 3300025924 Ga0207694_10011700 Ga0207694_100117003 230
103 3300025936 Ga0207670_10006185 Ga0207670_100061854 230
104 3300025949 Ga0207667_10106303 Ga0207667_101063032 230
105 3300026041 Ga0207639_10246235 Ga0207639_102462352 230
106 3300026078 Ga0207702_10080488 Ga0207702_100804882 230
107 3300026088 Ga0207641_10096087 Ga0207641_100960872 230
108 3300028556 Ga0265337_1001373 Ga0265337_10013738 230
109 3300028556 Ga0265337_1001455 Ga0265337_10014552 230
110 3300028556 Ga0265337_1013129 Ga0265337_10131293 230
111 3300028666 Ga0265336_10000507 Ga0265336_100005078 230
112 3300028800 Ga0265338_10002101 Ga0265338_1000210117 230
113 3300028800 Ga0265338_10002935 Ga0265338_100029358 230
114 3300028800 Ga0265338_10026280 Ga0265338_100262802 230
115 3300031240 Ga0265320_10002014 Ga0265320_100020149 230
116 3300031240 Ga0265320_10009715 Ga0265320_100097152 230
117 3300031241 Ga0265325_10198569 Ga0265325_101985692 230
118 3300031249 Ga0265339_10048061 Ga0265339_100480612 230
119 3300031712 Ga0265342_10115297 Ga0265342_101152972 230
120 3300045051 Ga0451576_0183836 Ga0451576_0183836_482_1174 230
121 3300045051 Ga0451576_1004623 Ga0451576_1004623_75_773 230
122 3300046678 Ga0495599_0092418 Ga0495599_0092418_156_848 230
123 3300050509 nmdc:mga0qj67_430583_c1 nmdc:mga0qj67_430583_c1_218_910 230
124 3300050510 nmdc:mga06r32_52412_c1 nmdc:mga06r32_52412_c1_1755_2447 230
125 3300003320 rootH2_10148810 rootH2_101488108 231
126 3300005336 Ga0070680_100546545 Ga0070680_1005465451 231
127 3300005339 Ga0070660_100148944 Ga0070660_1001489442 231
128 3300005340 Ga0070689_100106113 Ga0070689_1001061133 231
129 3300005340 Ga0070689_100360022 Ga0070689_1003600222 231
130 3300005365 Ga0070688_100027314 Ga0070688_1000273142 231
131 3300005435 Ga0070714_100045231 Ga0070714_1000452312 231
132 3300005436 Ga0070713_100617050 Ga0070713_1006170502 231
133 3300005438 Ga0070701_10124449 Ga0070701_101244491 231
134 3300005445 Ga0070708_100260664 Ga0070708_1002606642 231
135 3300005466 Ga0070685_10300073 Ga0070685_103000732 231
136 3300005466 Ga0070685_10376452 Ga0070685_103764521 231
137 3300005535 Ga0070684_100184201 Ga0070684_1001842013 231
138 3300005544 Ga0070686_100179023 Ga0070686_1001790232 231
139 3300005563 Ga0068855_100906960 Ga0068855_1009069601 231
140 3300005614 Ga0068856_100046798 Ga0068856_1000467982 231
141 3300005614 Ga0068856_100379132 Ga0068856_1003791322 231
142 3300005617 Ga0068859_100017089 Ga0068859_1000170895 231
143 3300005618 Ga0068864_100281435 Ga0068864_1002814352 231
144 3300005719 Ga0068861_100433154 Ga0068861_1004331542 231
145 3300005841 Ga0068863_100290172 Ga0068863_1002901721 231
146 3300005841 Ga0068863_100785678 Ga0068863_1007856782 231
147 3300005842 Ga0068858_100433446 Ga0068858_1004334462 231
148 3300005842 Ga0068858_100566454 Ga0068858_1005664542 231
149 3300005843 Ga0068860_100887854 Ga0068860_1008878541 231
150 3300006880 Ga0075429_100021187 Ga0075429_1000211872 231
151 3300006914 Ga0075436_100133421 Ga0075436_1001334212 231
152 3300006931 Ga0097620_100017089 Ga0097620_1000170895 231
153 3300009093 Ga0105240_10246722 Ga0105240_102467222 231
154 3300009093 Ga0105240_10277708 Ga0105240_102777082 231
155 3300009094 Ga0111539_10125662 Ga0111539_101256621 231
156 3300009094 Ga0111539_10256071 Ga0111539_102560711 231
157 3300009551 Ga0105238_10142891 Ga0105238_101428911 231
158 3300013104 Ga0157370_10015323 Ga0157370_100153232 231
159 3300013104 Ga0157370_10479858 Ga0157370_104798581 231
160 3300013296 Ga0157374_10184202 Ga0157374_101842022 231
161 3300013307 Ga0157372_10426953 Ga0157372_104269532 231
162 3300013307 Ga0157372_11601753 Ga0157372_116017531 231
163 3300014325 Ga0163163_10000083 Ga0163163_1000008369 231
164 3300014325 Ga0163163_10129259 Ga0163163_101292592 231
165 3300014968 Ga0157379_10190218 Ga0157379_101902182 231
166 3300014969 Ga0157376_10247754 Ga0157376_102477541 231
167 3300025912 Ga0207707_10075934 Ga0207707_100759342 231
168 3300025913 Ga0207695_10463887 Ga0207695_104638871 231
169 3300025919 Ga0207657_10260533 Ga0207657_102605331 231
170 3300025929 Ga0207664_10060888 Ga0207664_100608882 231
171 3300025936 Ga0207670_10008588 Ga0207670_100085883 231
172 3300025936 Ga0207670_10015117 Ga0207670_100151173 231
173 3300025936 Ga0207670_10017989 Ga0207670_100179893 231
174 3300025936 Ga0207670_10324072 Ga0207670_103240722 231
175 3300026035 Ga0207703_10233055 Ga0207703_102330552 231
176 3300026035 Ga0207703_10575257 Ga0207703_105752572 231
177 3300026078 Ga0207702_10009697 Ga0207702_100096972 231
178 3300026078 Ga0207702_10252684 Ga0207702_102526841 231
179 3300026118 Ga0207675_100428230 Ga0207675_1004282302 231
180 3300028556 Ga0265337_1002115 Ga0265337_10021152 231
181 3300028800 Ga0265338_10002784 Ga0265338_100027846 231
182 3300028800 Ga0265338_10004643 Ga0265338_100046436 231
183 3300028800 Ga0265338_10106978 Ga0265338_101069783 231
184 3300029957 Ga0265324_10023132 Ga0265324_100231321 231
185 3300031240 Ga0265320_10016470 Ga0265320_100164705 231
186 3300031247 Ga0265340_10007548 Ga0265340_100075484 231
187 3300031247 Ga0265340_10050055 Ga0265340_100500552 231
188 3300031251 Ga0265327_10001028 Ga0265327_1000102835 231
189 3300031344 Ga0265316_10088856 Ga0265316_100888562 231
190 3300031711 Ga0265314_10048712 Ga0265314_100487122 231
191 3300034816 Ga0373930_0014448 Ga0373930_0014448_75_770 231
192 3300035084 Ga0373928_0000288 Ga0373928_0000288_9184_9879 231
193 3300035085 Ga0373929_0097426 Ga0373929_0097426_19_714 231
194 3300035089 Ga0373944_0000165 Ga0373944_0000165_12524_13219 231
195 3300035091 Ga0373951_0038117 Ga0373951_0038117_355_1050 231
196 3300035112 Ga0373932_0000002 Ga0373932_0000002_42025_42720 231
197 3300035116 Ga0373945_0006126 Ga0373945_0006126_1117_1812 231
198 3300035118 Ga0373954_0012906 Ga0373954_0012906_1927_2637 231
199 3300035171 Ga0373946_0039825 Ga0373946_0039825_667_1362 231
200 3300035242 Ga0373962_0000280 Ga0373962_0000280_868_1563 231
201 3300035691 Ga0373931_0000012 Ga0373931_0000012_42044_42739 231
202 3300035692 Ga0373935_0193782 Ga0373935_0193782_371_1081 231
203 3300036401 Ga0373937_0144703 Ga0373937_0144703_1494_2189 231
204 3300036401 Ga0373937_0358723 Ga0373937_0358723_548_1258 231
205 3300037068 Ga0373925_0001369 Ga0373925_0001369_136_831 231
206 3300037068 Ga0373925_0040464 Ga0373925_0040464_340_1044 231
207 3300045051 Ga0451576_0037759 Ga0451576_0037759_2453_3151 231
208 3300045051 Ga0451576_0095641 Ga0451576_0095641_892_1587 231
209 3300045051 Ga0451576_0394263 Ga0451576_0394263_449_1144 231
210 3300045051 Ga0451576_0557693 Ga0451576_0557693_456_1151 231
211 3300045051 Ga0451576_1312664 Ga0451576_1312664_31_726 231
212 3300046454 Ga0495592_0000052 Ga0495592_0000052_25023_25718 231
213 3300046454 Ga0495592_0021991 Ga0495592_0021991_1030_1740 231
214 3300046473 Ga0495582_0150915 Ga0495582_0150915_317_1015 231
215 3300046477 Ga0495664_0079275 Ga0495664_0079275_423_1118 231
216 3300046514 Ga0495618_0006173 Ga0495618_0006173_5813_6508 231
217 3300046516 Ga0495628_0000331 Ga0495628_0000331_24363_25058 231
218 3300046516 Ga0495628_0132808 Ga0495628_0132808_15_743 231
219 3300046517 Ga0495630_0004361 Ga0495630_0004361_3170_3865 231
220 3300046526 Ga0495666_0088041 Ga0495666_0088041_232_930 231
221 3300046526 Ga0495666_0180997 Ga0495666_0180997_158_853 231
222 3300046529 Ga0495652_0159479 Ga0495652_0159479_1015_1710 231
223 3300046535 Ga0495586_0001856 Ga0495586_0001856_9742_10437 231
224 3300046535 Ga0495586_0002328 Ga0495586_0002328_4449_5147 231
225 3300046543 Ga0495645_0071232 Ga0495645_0071232_732_1442 231
226 3300046543 Ga0495645_0149900 Ga0495645_0149900_84_779 231
227 3300046559 Ga0495667_0120993 Ga0495667_0120993_298_993 231
228 3300046642 Ga0495634_0225983 Ga0495634_0225983_134_832 231
229 3300046663 Ga0495635_0331994 Ga0495635_0331994_178_873 231
230 3300046678 Ga0495599_0007726 Ga0495599_0007726_2578_3273 231
231 3300046678 Ga0495599_0015692 Ga0495599_0015692_1037_1747 231
232 3300046681 Ga0495647_0038437 Ga0495647_0038437_1009_1707 231
233 3300046683 Ga0495658_0069132 Ga0495658_0069132_179_877 231
234 3300046689 Ga0495613_0560695 Ga0495613_0560695_50_748 231
235 3300046809 Ga0495600_0333050 Ga0495600_0333050_171_881 231
236 3300047315 Ga0495581_0330369 Ga0495581_0330369_66_761 231
237 3300047317 Ga0495604_0261189 Ga0495604_0261189_212_907 231
238 3300047319 Ga0495674_0016633 Ga0495674_0016633_388_1083 231
239 3300047319 Ga0495674_0111956 Ga0495674_0111956_782_1492 231
240 3300047444 Ga0495675_0288383 Ga0495675_0288383_271_966 231
241 3300047471 Ga0495684_0166838 Ga0495684_0166838_214_930 231
242 3300048918 Ga0496115_0003448 Ga0496115_0003448_700_1395 231
243 3300050508 nmdc:mga09592_304781_c1 nmdc:mga09592_304781_c1_598_1311 231
244 3300050514 nmdc:mga08x19_82265_c1 nmdc:mga08x19_82265_c1_875_1570 231
245 3300050515 nmdc:mga0a205_518678_c1 nmdc:mga0a205_518678_c1_217_912 231
246 3300053098 Ga0500650_0130756 Ga0500650_0130756_58_759 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

34

144

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

180

257

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9743 3 120
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9741 4 121
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9737 4 121
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.971 2 120
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9662 3 120
ID Description Score Start End Superfamily
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9929 4 84 3.40.50.2300
af_P9WGM7_2_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9783 1 79 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9777 1 79 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9775 1 120 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9772 2 79 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A258YR77-F1-model_v4 Hybrid sensor histidine kinase/response regulator 0.9834 1 120 GO:0000155
AF-A0A1F6CTP4-F1-model_v4 Response regulatory domain-containing protein 0.9784 2 121 GO:0000160
GO:0016791
AF-A0A4Q5X212-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9781 2 120 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565
AF-A0A1G3BEP8-F1-model_v4 Fis family transcriptional regulator 0.9753 2 120 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565
AF-A0A1F5AAV0-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9721 2 121 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565

Feature Viewer

pLDDT pTM Quality
85.41 0.54 Medium
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Predicted Structure (AlphaFold2)

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