F358182

General Info

Members Datasets Scaffolds Average Seq Length
246 140 246 471

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10032239|Ga0157375_100322394
Length 483
Sequence MFLQQNFAHSFQSPIIRIVLVAIAIGLLYILWREVRKIPPKLLTLMATAFIDMVGLLMIIPLLPFYVKTLGGSGVDLFGFHLGIGIIVGFIIAAFTVAQLVSAPMWGRFSDRVGRRPTLLIALTASGLAYLIFGFANSLFLLFLSRIVQGAGGGTVGVIQAYVADSTAPRDRARALGWLSATTNLGVALGPVLGSFAIALGKRDLIPGPATFQMGHAAPGILAAMLCLINIGFAARYLTESRDLSEHAPVEGEVSRTSREAIWRVVSHSSEPSSRLIWIYAISIGAFQGSFSVLALFLNARFQVTEQTIGYFFMYIGSISVFTRVLLLGRMVDWLGEAKLSRLGLLLLASGVVGMPLSRNLWMLGIAVALIPLGTAFTFPCVTALLSRVISPRERGLYMGMQQTYGGVARVIAPLFFGWSFDRLGVSSPYFFSSAFIVATIFLGLGLDRYESHPQNTPIPTESAPSVQSVDNANVVSESANPR

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
56 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
63 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
65 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
66 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
74 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
122 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
126 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
127 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.22
Rhizosphere 98.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000019 3300002074 Bacteria 120384
2 JGI24034J26672_10000003 3300002239 Bacteria 501747
3 JGI25406J46586_10002459 3300003203 Bacteria 8757
4 Ga0065714_10002183 3300005288 Bacteria 378167
5 Ga0065712_10000030 3300005290 Bacteria 237869
6 Ga0065712_10009059 3300005290 Bacteria 2349
7 Ga0065715_10093451 3300005293 Unclassified 4675
8 Ga0065707_10011615 3300005295 Bacteria 3389
9 Ga0065707_10126823 3300005295 Bacteria 1996
10 Ga0065707_10128284 3300005295 Unclassified 1968
11 Ga0065707_10138560 3300005295 Bacteria 1784
12 Ga0070690_100002540 3300005330 Bacteria 9820
13 Ga0070670_100000057 3300005331 Bacteria 118540
14 Ga0068869_100003827 3300005334 Bacteria 9284
15 Ga0068869_100039146 3300005334 Bacteria 3384
16 Ga0068869_100084547 3300005334 Unclassified 2375
17 Ga0070666_10045782 3300005335 Plasmid 2932
18 Ga0070680_100009140 3300005336 Bacteria 7600
19 Ga0070682_100000221 3300005337 Bacteria 41449
20 Ga0070682_100001899 3300005337 Bacteria 11665
21 Ga0070660_100110212 3300005339 Unclassified 2189
22 Ga0070687_100053192 3300005343 Bacteria 2105
23 Ga0070692_10048555 3300005345 Bacteria 2199
24 Ga0070668_100008409 3300005347 Bacteria 7665
25 Ga0070669_100004391 3300005353 Bacteria 10176
26 Ga0070669_100020238 3300005353 Bacteria 4754
27 Ga0070669_100103351 3300005353 Unclassified 2152
28 Ga0070675_100086615 3300005354 Bacteria 2618
29 Ga0070671_100001320 3300005355 Bacteria 18645
30 Ga0070673_100050501 3300005364 Bacteria 3252
31 Ga0070659_100014979 3300005366 Bacteria 5800
32 Ga0070659_100087581 3300005366 Unclassified 2493
33 Ga0070667_100083929 3300005367 Unclassified 2729
34 Ga0070703_10000157 3300005406 Bacteria 34432
35 Ga0070703_10000161 3300005406 Bacteria 33774
36 Ga0070703_10002281 3300005406 Bacteria 5553
37 Ga0070703_10016863 3300005406 Bacteria 2101
38 Ga0070709_10000177 3300005434 Bacteria 40407
39 Ga0070711_100000004 3300005439 Bacteria 188789
40 Ga0070705_100000013 3300005440 Bacteria 99246
41 Ga0070700_100010712 3300005441 Bacteria 5065
42 Ga0070694_100000607 3300005444 Bacteria 19750
43 Ga0070694_100003869 3300005444 Bacteria 8948
44 Ga0070694_100008217 3300005444 Bacteria 6380
45 Ga0070694_100045744 3300005444 Unclassified 2935
46 Ga0070694_100068479 3300005444 Unclassified 2440
47 Ga0070694_100087360 3300005444 Unclassified 2181
48 Ga0070708_100008789 3300005445 Bacteria 8124
49 Ga0070708_100017213 3300005445 Bacteria 6021
50 Ga0070681_10000041 3300005458 Bacteria 89178
51 Ga0070681_10013511 3300005458 Bacteria 8118
52 Ga0070706_100000002 3300005467 Bacteria 326510
53 Ga0070706_100000020 3300005467 Bacteria 165628
54 Ga0070706_100003333 3300005467 Bacteria 15858
55 Ga0070706_100008792 3300005467 Bacteria 9411
56 Ga0070706_100213157 3300005467 Bacteria 1803
57 Ga0070707_100000128 3300005468 Bacteria 71110
58 Ga0070707_100036476 3300005468 Bacteria 4691
59 Ga0070707_100065242 3300005468 Bacteria 3497
60 Ga0070698_100000010 3300005471 Bacteria 117353
61 Ga0070698_100000157 3300005471 Bacteria 61949
62 Ga0070698_100015037 3300005471 Bacteria 8181
63 Ga0070698_100017221 3300005471 Bacteria 7613
64 Ga0070698_100017992 3300005471 Bacteria 7442
65 Ga0070698_100019607 3300005471 Bacteria 7094
66 Ga0070698_100221020 3300005471 Unclassified 1828
67 Ga0070699_100000009 3300005518 Bacteria 272902
68 Ga0070699_100000688 3300005518 Bacteria 31515
69 Ga0070699_100050324 3300005518 Bacteria 3607
70 Ga0070699_100056770 3300005518 Bacteria 3390
71 Ga0070699_100061863 3300005518 Unclassified 3244
72 Ga0070679_100000074 3300005530 Bacteria 74890
73 Ga0070679_100043070 3300005530 Bacteria 4497
74 Ga0070697_100000465 3300005536 Bacteria 30980
75 Ga0070697_100000493 3300005536 Bacteria 29993
76 Ga0070697_100009447 3300005536 Bacteria 7618
77 Ga0070697_100099437 3300005536 Bacteria 2415
78 Ga0068853_100046833 3300005539 Bacteria 3710
79 Ga0070695_100083660 3300005545 Bacteria 2115
80 Ga0070695_100098665 3300005545 Bacteria 1963
81 Ga0070696_100000079 3300005546 Bacteria 47760
82 Ga0070696_100170532 3300005546 Bacteria 1608
83 Ga0070693_100002438 3300005547 Bacteria 8566
84 Ga0070664_100003117 3300005564 Bacteria 13406
85 Ga0068856_100014484 3300005614 Bacteria 7617
86 Ga0070702_100007664 3300005615 Bacteria 5178
87 Ga0068852_100083622 3300005616 Bacteria 2838
88 Ga0068859_100004364 3300005617 Bacteria 14430
89 Ga0068864_100014303 3300005618 Bacteria 6592
90 Ga0068864_100087236 3300005618 Unclassified 2747
91 Ga0068864_100106341 3300005618 Bacteria 2495
92 Ga0068866_10007009 3300005718 Bacteria 4710
93 Ga0068861_100154629 3300005719 Unclassified 1885
94 Ga0068861_100199119 3300005719 Bacteria 1680
95 Ga0068863_100018400 3300005841 Bacteria 6686
96 Ga0068858_100001045 3300005842 Bacteria 28584
97 Ga0068858_100061647 3300005842 Bacteria 3467
98 Ga0068860_100033980 3300005843 Plasmid 4892
99 Ga0068862_100016274 3300005844 Bacteria 6189
100 Ga0068862_100083960 3300005844 Bacteria 2766
101 Ga0068862_100094102 3300005844 Bacteria 2613
102 Ga0081539_10000931 3300005985 Bacteria 54965
103 Ga0070715_10000030 3300006163 Bacteria 88060
104 Ga0070716_100000009 3300006173 Bacteria 173295
105 Ga0097621_100002816 3300006237 Bacteria 11917
106 Ga0068871_100005008 3300006358 Bacteria 9257
107 Ga0075428_100084666 3300006844 Unclassified 3459
108 Ga0075433_10047740 3300006852 Plasmid 3724
109 Ga0075433_10206655 3300006852 Bacteria 1746
110 Ga0075433_10253048 3300006852 Bacteria 1562
111 Ga0075429_100016995 3300006880 Bacteria 6290
112 Ga0075429_100033682 3300006880 Bacteria 4451
113 Ga0075436_100001837 3300006914 Bacteria 14550
114 Ga0075436_100048684 3300006914 Bacteria 2925
115 Ga0097620_100004364 3300006931 Bacteria 14430
116 Ga0075435_100031397 3300007076 Bacteria 4184
117 Ga0099794_10046082 3300007265 Bacteria 2087
118 Ga0111539_10054580 3300009094 Bacteria 4753
119 Ga0111539_10074679 3300009094 Bacteria 3994
120 Ga0105245_10100175 3300009098 Plasmid 2680
121 Ga0105247_10000003 3300009101 Bacteria 694517
122 Ga0114129_10003333 3300009147 Bacteria 22577
123 Ga0114129_10033486 3300009147 Bacteria 7262
124 Ga0114129_10044644 3300009147 Bacteria 6234
125 Ga0114129_10050605 3300009147 Bacteria 5835
126 Ga0114129_10068202 3300009147 Bacteria 4960
127 Ga0114129_10074758 3300009147 Bacteria 4719
128 Ga0114129_10193334 3300009147 Bacteria 2761
129 Ga0105243_10000022 3300009148 Bacteria 203002
130 Ga0105243_10055370 3300009148 Bacteria 3151
131 Ga0105241_10179854 3300009174 Bacteria 1753
132 Ga0105242_10000014 3300009176 Bacteria 129984
133 Ga0105242_10065885 3300009176 Bacteria 2990
134 Ga0105248_10001341 3300009177 Bacteria 27433
135 Ga0105248_10016361 3300009177 Bacteria 8163
136 Ga0105249_10000018 3300009553 Bacteria 275907
137 Ga0105249_10035630 3300009553 Bacteria 4512
138 Ga0105249_10056232 3300009553 Bacteria 3602
139 Ga0157373_10046810 3300013100 Bacteria 3086
140 Ga0157374_10031975 3300013296 Plasmid 4788
141 Ga0157378_10006191 3300013297 Bacteria 10469
142 Ga0157378_10009604 3300013297 Bacteria 8423
143 Ga0157378_10019547 3300013297 Bacteria 5955
144 Ga0157378_10028230 3300013297 Unclassified 4949
145 Ga0163162_10000001 3300013306 Bacteria 751833
146 Ga0163162_10006088 3300013306 Bacteria 11677
147 Ga0163162_10040786 3300013306 Unclassified 4644
148 Ga0157372_10223327 3300013307 Bacteria 2184
149 Ga0157375_10007817 3300013308 Bacteria 9357
150 Ga0157375_10032239 3300013308 Unclassified 4968
151 Ga0157375_10074432 3300013308 Plasmid 3417
152 Ga0157375_10211316 3300013308 Bacteria 2098
153 Ga0163163_10000184 3300014325 Bacteria 64203
154 Ga0163163_10011179 3300014325 Bacteria 8129
155 Ga0163163_10031817 3300014325 Bacteria 5095
156 Ga0163163_10148037 3300014325 Bacteria 2392
157 Ga0157380_10002023 3300014326 Bacteria 13527
158 Ga0157380_10106736 3300014326 Unclassified 2344
159 Ga0157376_10004938 3300014969 Bacteria 9303
160 Ga0207672_1000052 3300025223 Bacteria 15428
161 Ga0207653_10000118 3300025885 Bacteria 55787
162 Ga0207653_10000254 3300025885 Bacteria 33997
163 Ga0207710_10000001 3300025900 Bacteria 1797433
164 Ga0207685_10000009 3300025905 Bacteria 242842
165 Ga0207699_10000003 3300025906 Bacteria 577076
166 Ga0207643_10021298 3300025908 Plasmid 3560
167 Ga0207684_10000076 3300025910 Bacteria 183107
168 Ga0207684_10000215 3300025910 Bacteria 89389
169 Ga0207684_10007421 3300025910 Bacteria 9869
170 Ga0207684_10016389 3300025910 Bacteria 6363
171 Ga0207684_10016598 3300025910 Bacteria 6322
172 Ga0207684_10176570 3300025910 Bacteria 1841
173 Ga0207654_10016837 3300025911 Unclassified 3812
174 Ga0207707_10000077 3300025912 Bacteria 100255
175 Ga0207707_10032045 3300025912 Bacteria 4601
176 Ga0207663_10000007 3300025916 Bacteria 208566
177 Ga0207660_10009830 3300025917 Bacteria 6193
178 Ga0207660_10078475 3300025917 Bacteria 2420
179 Ga0207662_10008471 3300025918 Bacteria 5630
180 Ga0207662_10061167 3300025918 Bacteria 2260
181 Ga0207652_10000096 3300025921 Bacteria 96047
182 Ga0207646_10001101 3300025922 Bacteria 34421
183 Ga0207681_10001071 3300025923 Bacteria 17753
184 Ga0207681_10011996 3300025923 Bacteria 5337
185 Ga0207681_10032649 3300025923 Unclassified 3410
186 Ga0207694_10002866 3300025924 Bacteria 13882
187 Ga0207650_10000027 3300025925 Bacteria 257466
188 Ga0207650_10001954 3300025925 Bacteria 14491
189 Ga0207690_10096875 3300025932 Bacteria 2098
190 Ga0207706_10164972 3300025933 Bacteria 1947
191 Ga0207686_10000002 3300025934 Bacteria 453961
192 Ga0207686_10029768 3300025934 Plasmid 3225
193 Ga0207686_10089447 3300025934 Bacteria 2029
194 Ga0207709_10000012 3300025935 Bacteria 552803
195 Ga0207670_10023693 3300025936 Bacteria 3825
196 Ga0207665_10000001 3300025939 Bacteria 279842
197 Ga0207665_10036309 3300025939 Unclassified 3277
198 Ga0207691_10024506 3300025940 Bacteria 5674
199 Ga0207711_10057700 3300025941 Bacteria 3338
200 Ga0207689_10005495 3300025942 Bacteria 11335
201 Ga0207689_10014568 3300025942 Bacteria 6686
202 Ga0207689_10060896 3300025942 Bacteria 3104
203 Ga0207689_10080071 3300025942 Unclassified 2684
204 Ga0207712_10000022 3300025961 Bacteria 284365
205 Ga0207712_10006081 3300025961 Bacteria 7620
206 Ga0207668_10014300 3300025972 Unclassified 4911
207 Ga0207677_10161386 3300026023 Unclassified 1742
208 Ga0207703_10001746 3300026035 Bacteria 19447
209 Ga0207703_10071144 3300026035 Unclassified 2873
210 Ga0207708_10018102 3300026075 Bacteria 5302
211 Ga0207641_10013309 3300026088 Bacteria 6748
212 Ga0207641_10179021 3300026088 Bacteria 1941
213 Ga0207676_10024855 3300026095 Plasmid 4438
214 Ga0207676_10053528 3300026095 Unclassified 3160
215 Ga0207674_10000722 3300026116 Bacteria 43236
216 Ga0207675_100166647 3300026118 Unclassified 2104
217 Ga0207428_10011882 3300027907 Bacteria 7670
218 Ga0268264_10065272 3300028381 Plasmid 3066
219 Ga0268264_10098088 3300028381 Bacteria 2541
220 Ga0268264_10149865 3300028381 Bacteria 2090
221 Ga0373951_0002042 3300035091 Bacteria 5170
222 Ga0242420_000511 3300038996 Bacteria 4445
223 Ga0451576_0272118 3300045051 Unclassified 1771
224 Ga0495632_0019369 3300046519 Unclassified 3709
225 Ga0495663_0002869 3300046525 Bacteria 5097
226 Ga0495598_0000274 3300046537 Bacteria 9263
227 Ga0495659_0020114 3300046664 Unclassified 2239
228 Ga0496102_0055054 3300048905 Bacteria 3628
229 Ga0496103_0039567 3300048906 Bacteria 2898
230 Ga0496106_0014491 3300048909 Bacteria 5825
231 Ga0501075_0115309 3300049591 Bacteria 2043
232 nmdc:mga05p37_16632_c1 3300050507 Bacteria 8860
233 nmdc:mga05p37_250331_c1 3300050507 Unclassified 2125
234 nmdc:mga05p37_63834_c1 3300050507 Bacteria 4532
235 nmdc:mga09592_297130_c1 3300050508 Unclassified 1400
236 nmdc:mga0qj67_58506_c1 3300050509 Bacteria 3056
237 nmdc:mga08y16_13131_c1 3300050511 Bacteria 8714
238 nmdc:mga08y16_1448_c1 3300050511 Bacteria 23762
239 nmdc:mga0n895_252695_c1 3300050512 Unclassified 1789
240 nmdc:mga0rr50_7579_c1 3300050513 Bacteria 6706
241 nmdc:mga08x19_2_c1 3300050514 Bacteria 741277
242 nmdc:mga08x19_83185_c1 3300050514 Unclassified 2104
243 nmdc:mga0a205_11694_c1 3300050515 Bacteria 4422
244 nmdc:mga0a205_195652_c1 3300050515 Bacteria 1913
245 nmdc:mga0a205_52147_c1 3300050515 Plasmid 3949
246 Ga0501084_0134163 3300054114 Bacteria 2084

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050508 nmdc:mga09592_297130_c1 nmdc:mga09592_297130_c1_51_1307 413
2 3300050509 nmdc:mga0qj67_58506_c1 nmdc:mga0qj67_58506_c1_39_1295 413
3 3300025912 Ga0207707_10000077 Ga0207707_1000007774 419
4 3300025921 Ga0207652_10000096 Ga0207652_1000009672 419
5 3300005295 Ga0065707_10011615 Ga0065707_100116151 420
6 3300007076 Ga0075435_100031397 Ga0075435_1000313974 438
7 3300050513 nmdc:mga0rr50_7579_c1 nmdc:mga0rr50_7579_c1_1435_2850 438
8 3300026116 Ga0207674_10000722 Ga0207674_1000072231 439
9 3300005467 Ga0070706_100000002 Ga0070706_100000002139 440
10 3300025910 Ga0207684_10000076 Ga0207684_1000007678 440
11 3300006880 Ga0075429_100016995 Ga0075429_1000169953 443
12 3300009147 Ga0114129_10044644 Ga0114129_100446447 443
13 3300005467 Ga0070706_100213157 Ga0070706_1002131571 445
14 3300025910 Ga0207684_10176570 Ga0207684_101765701 445
15 3300005336 Ga0070680_100009140 Ga0070680_1000091404 446
16 3300005458 Ga0070681_10000041 Ga0070681_1000004168 446
17 3300005530 Ga0070679_100000074 Ga0070679_10000007430 446
18 3300009147 Ga0114129_10068202 Ga0114129_100682021 448
19 3300009177 Ga0105248_10001341 Ga0105248_1000134121 448
20 3300013296 Ga0157374_10031975 Ga0157374_100319753 448
21 3300013297 Ga0157378_10009604 Ga0157378_100096043 448
22 3300013306 Ga0163162_10006088 Ga0163162_100060886 448
23 3300013308 Ga0157375_10007817 Ga0157375_100078176 448
24 3300014325 Ga0163163_10011179 Ga0163163_100111791 448
25 3300050511 nmdc:mga08y16_1448_c1 nmdc:mga08y16_1448_c1_21847_23283 448
26 3300005518 Ga0070699_100000009 Ga0070699_10000000987 449
27 3300009098 Ga0105245_10100175 Ga0105245_101001751 449
28 3300009148 Ga0105243_10000022 Ga0105243_1000002275 449
29 3300009174 Ga0105241_10179854 Ga0105241_101798541 449
30 3300009176 Ga0105242_10000014 Ga0105242_1000001465 449
31 3300009177 Ga0105248_10016361 Ga0105248_100163616 449
32 3300014969 Ga0157376_10004938 Ga0157376_100049382 449
33 3300025934 Ga0207686_10000002 Ga0207686_10000002288 449
34 3300025935 Ga0207709_10000012 Ga0207709_10000012110 449
35 3300005467 Ga0070706_100003333 Ga0070706_10000333316 450
36 3300005618 Ga0068864_100014303 Ga0068864_1000143036 450
37 3300006237 Ga0097621_100002816 Ga0097621_1000028163 450
38 3300006358 Ga0068871_100005008 Ga0068871_1000050083 450
39 3300009147 Ga0114129_10193334 Ga0114129_101933342 450
40 3300025910 Ga0207684_10016598 Ga0207684_100165985 450
41 3300026095 Ga0207676_10024855 Ga0207676_100248554 450
42 3300049591 Ga0501075_0115309 Ga0501075_0115309_136_1494 450
43 3300054114 Ga0501084_0134163 Ga0501084_0134163_454_1812 450
44 3300005353 Ga0070669_100020238 Ga0070669_1000202384 453
45 3300005616 Ga0068852_100083622 Ga0068852_1000836221 453
46 3300006852 Ga0075433_10047740 Ga0075433_100477402 453
47 3300009147 Ga0114129_10050605 Ga0114129_100506054 453
48 3300050507 nmdc:mga05p37_16632_c1 nmdc:mga05p37_16632_c1_2490_3923 453
49 3300050515 nmdc:mga0a205_52147_c1 nmdc:mga0a205_52147_c1_1352_2785 453
50 3300005330 Ga0070690_100002540 Ga0070690_1000025403 456
51 3300005353 Ga0070669_100103351 Ga0070669_1001033511 456
52 3300005444 Ga0070694_100045744 Ga0070694_1000457442 456
53 3300005719 Ga0068861_100199119 Ga0068861_1001991191 456
54 3300005844 Ga0068862_100016274 Ga0068862_1000162742 456
55 3300014326 Ga0157380_10002023 Ga0157380_100020235 456
56 3300025923 Ga0207681_10032649 Ga0207681_100326493 456
57 3300005337 Ga0070682_100001899 Ga0070682_10000189910 458
58 3300005345 Ga0070692_10048555 Ga0070692_100485551 458
59 3300005366 Ga0070659_100087581 Ga0070659_1000875812 458
60 3300005406 Ga0070703_10002281 Ga0070703_100022812 458
61 3300005440 Ga0070705_100000013 Ga0070705_1000000138 458
62 3300005545 Ga0070695_100083660 Ga0070695_1000836602 458
63 3300005547 Ga0070693_100002438 Ga0070693_1000024384 458
64 3300005471 Ga0070698_100017221 Ga0070698_1000172215 460
65 3300006163 Ga0070715_10000030 Ga0070715_1000003070 460
66 3300025905 Ga0207685_10000009 Ga0207685_100000096 460
67 3300005518 Ga0070699_100050324 Ga0070699_1000503242 461
68 3300007265 Ga0099794_10046082 Ga0099794_100460821 461
69 3300005331 Ga0070670_100000057 Ga0070670_10000005750 462
70 3300009553 Ga0105249_10035630 Ga0105249_100356304 462
71 3300014325 Ga0163163_10000184 Ga0163163_100001846 462
72 3300025911 Ga0207654_10016837 Ga0207654_100168373 462
73 3300025925 Ga0207650_10000027 Ga0207650_1000002759 462
74 3300025961 Ga0207712_10006081 Ga0207712_100060814 462
75 3300003203 JGI25406J46586_10002459 JGI25406J46586_100024596 463
76 3300005353 Ga0070669_100004391 Ga0070669_1000043915 463
77 3300005985 Ga0081539_10000931 Ga0081539_1000093110 463
78 3300006880 Ga0075429_100033682 Ga0075429_1000336824 463
79 3300025923 Ga0207681_10001071 Ga0207681_1000107111 463
80 3300025925 Ga0207650_10001954 Ga0207650_1000195411 463
81 3300025933 Ga0207706_10164972 Ga0207706_101649722 463
82 3300025936 Ga0207670_10023693 Ga0207670_100236932 463
83 3300035091 Ga0373951_0002042 Ga0373951_0002042_1458_2852 463
84 3300038996 Ga0242420_000511 Ga0242420_000511_2621_4024 463
85 3300005290 Ga0065712_10009059 Ga0065712_100090592 464
86 3300005334 Ga0068869_100003827 Ga0068869_1000038272 464
87 3300005334 Ga0068869_100084547 Ga0068869_1000845472 464
88 3300005335 Ga0070666_10045782 Ga0070666_100457822 464
89 3300005343 Ga0070687_100053192 Ga0070687_1000531922 464
90 3300005354 Ga0070675_100086615 Ga0070675_1000866151 464
91 3300005355 Ga0070671_100001320 Ga0070671_1000013203 464
92 3300005364 Ga0070673_100050501 Ga0070673_1000505013 464
93 3300005367 Ga0070667_100083929 Ga0070667_1000839293 464
94 3300005444 Ga0070694_100068479 Ga0070694_1000684792 464
95 3300005468 Ga0070707_100065242 Ga0070707_1000652422 464
96 3300005536 Ga0070697_100000493 Ga0070697_10000049322 464
97 3300005614 Ga0068856_100014484 Ga0068856_1000144844 464
98 3300005615 Ga0070702_100007664 Ga0070702_1000076641 464
99 3300005618 Ga0068864_100106341 Ga0068864_1001063412 464
100 3300005841 Ga0068863_100018400 Ga0068863_1000184003 464
101 3300005842 Ga0068858_100061647 Ga0068858_1000616471 464
102 3300005843 Ga0068860_100033980 Ga0068860_1000339804 464
103 3300005844 Ga0068862_100094102 Ga0068862_1000941022 464
104 3300006852 Ga0075433_10253048 Ga0075433_102530481 464
105 3300009147 Ga0114129_10033486 Ga0114129_100334864 464
106 3300013297 Ga0157378_10006191 Ga0157378_100061918 464
107 3300013308 Ga0157375_10074432 Ga0157375_100744323 464
108 3300014326 Ga0157380_10106736 Ga0157380_101067362 464
109 3300025908 Ga0207643_10021298 Ga0207643_100212983 464
110 3300025917 Ga0207660_10009830 Ga0207660_100098302 464
111 3300025918 Ga0207662_10008471 Ga0207662_100084711 464
112 3300025918 Ga0207662_10061167 Ga0207662_100611671 464
113 3300025934 Ga0207686_10029768 Ga0207686_100297681 464
114 3300025940 Ga0207691_10024506 Ga0207691_100245062 464
115 3300025942 Ga0207689_10005495 Ga0207689_100054954 464
116 3300025942 Ga0207689_10060896 Ga0207689_100608962 464
117 3300026023 Ga0207677_10161386 Ga0207677_101613862 464
118 3300026088 Ga0207641_10013309 Ga0207641_100133093 464
119 3300026118 Ga0207675_100166647 Ga0207675_1001666471 464
120 3300028381 Ga0268264_10065272 Ga0268264_100652722 464
121 3300028381 Ga0268264_10149865 Ga0268264_101498652 464
122 3300046519 Ga0495632_0019369 Ga0495632_0019369_1368_2762 464
123 3300046525 Ga0495663_0002869 Ga0495663_0002869_2294_3694 464
124 3300046537 Ga0495598_0000274 Ga0495598_0000274_614_2014 464
125 3300048905 Ga0496102_0055054 Ga0496102_0055054_934_2370 464
126 3300048906 Ga0496103_0039567 Ga0496103_0039567_920_2356 464
127 3300048909 Ga0496106_0014491 Ga0496106_0014491_1746_3182 464
128 3300050515 nmdc:mga0a205_11694_c1 nmdc:mga0a205_11694_c1_1269_2705 464
129 3300005295 Ga0065707_10138560 Ga0065707_101385602 465
130 3300005334 Ga0068869_100039146 Ga0068869_1000391462 465
131 3300005444 Ga0070694_100008217 Ga0070694_1000082175 465
132 3300005444 Ga0070694_100087360 Ga0070694_1000873602 465
133 3300005445 Ga0070708_100008789 Ga0070708_1000087895 465
134 3300005467 Ga0070706_100008792 Ga0070706_1000087922 465
135 3300005468 Ga0070707_100036476 Ga0070707_1000364766 465
136 3300005471 Ga0070698_100019607 Ga0070698_1000196075 465
137 3300005518 Ga0070699_100000688 Ga0070699_10000068828 465
138 3300005518 Ga0070699_100056770 Ga0070699_1000567702 465
139 3300005536 Ga0070697_100000465 Ga0070697_10000046520 465
140 3300005536 Ga0070697_100009447 Ga0070697_1000094473 465
141 3300005536 Ga0070697_100099437 Ga0070697_1000994371 465
142 3300005546 Ga0070696_100170532 Ga0070696_1001705321 465
143 3300005564 Ga0070664_100003117 Ga0070664_1000031175 465
144 3300006844 Ga0075428_100084666 Ga0075428_1000846663 465
145 3300006914 Ga0075436_100048684 Ga0075436_1000486842 465
146 3300009094 Ga0111539_10054580 Ga0111539_100545802 465
147 3300009148 Ga0105243_10055370 Ga0105243_100553702 465
148 3300009176 Ga0105242_10065885 Ga0105242_100658853 465
149 3300013308 Ga0157375_10211316 Ga0157375_102113162 465
150 3300025910 Ga0207684_10016389 Ga0207684_100163892 465
151 3300025923 Ga0207681_10011996 Ga0207681_100119961 465
152 3300025924 Ga0207694_10002866 Ga0207694_100028665 465
153 3300025934 Ga0207686_10089447 Ga0207686_100894471 465
154 3300025942 Ga0207689_10014568 Ga0207689_100145682 465
155 3300045051 Ga0451576_0272118 Ga0451576_0272118_200_1609 465
156 3300050514 nmdc:mga08x19_83185_c1 nmdc:mga08x19_83185_c1_398_1795 465
157 3300005337 Ga0070682_100000221 Ga0070682_10000022123 466
158 3300005339 Ga0070660_100110212 Ga0070660_1001102122 466
159 3300005347 Ga0070668_100008409 Ga0070668_1000084092 466
160 3300005366 Ga0070659_100014979 Ga0070659_1000149794 466
161 3300005406 Ga0070703_10000161 Ga0070703_100001614 466
162 3300005434 Ga0070709_10000177 Ga0070709_1000017714 466
163 3300005439 Ga0070711_100000004 Ga0070711_10000000423 466
164 3300005445 Ga0070708_100017213 Ga0070708_1000172132 466
165 3300005458 Ga0070681_10013511 Ga0070681_100135114 466
166 3300005467 Ga0070706_100000020 Ga0070706_1000000204 466
167 3300005471 Ga0070698_100000157 Ga0070698_10000015726 466
168 3300005471 Ga0070698_100015037 Ga0070698_1000150371 466
169 3300005530 Ga0070679_100043070 Ga0070679_1000430703 466
170 3300005539 Ga0068853_100046833 Ga0068853_1000468333 466
171 3300005546 Ga0070696_100000079 Ga0070696_10000007922 466
172 3300005718 Ga0068866_10007009 Ga0068866_100070092 466
173 3300005719 Ga0068861_100154629 Ga0068861_1001546292 466
174 3300006914 Ga0075436_100001837 Ga0075436_1000018377 466
175 3300009553 Ga0105249_10000018 Ga0105249_10000018100 466
176 3300013100 Ga0157373_10046810 Ga0157373_100468102 466
177 3300013297 Ga0157378_10019547 Ga0157378_100195475 466
178 3300013306 Ga0163162_10000001 Ga0163162_10000001135 466
179 3300013306 Ga0163162_10040786 Ga0163162_100407862 466
180 3300013307 Ga0157372_10223327 Ga0157372_102233271 466
181 3300014325 Ga0163163_10031817 Ga0163163_100318173 466
182 3300014325 Ga0163163_10148037 Ga0163163_101480371 466
183 3300025885 Ga0207653_10000254 Ga0207653_1000025426 466
184 3300025906 Ga0207699_10000003 Ga0207699_10000003278 466
185 3300025910 Ga0207684_10000215 Ga0207684_100002154 466
186 3300025912 Ga0207707_10032045 Ga0207707_100320452 466
187 3300025916 Ga0207663_10000007 Ga0207663_1000000742 466
188 3300025917 Ga0207660_10078475 Ga0207660_100784751 466
189 3300025932 Ga0207690_10096875 Ga0207690_100968751 466
190 3300025939 Ga0207665_10036309 Ga0207665_100363092 466
191 3300025942 Ga0207689_10080071 Ga0207689_100800712 466
192 3300025961 Ga0207712_10000022 Ga0207712_1000002235 466
193 3300025972 Ga0207668_10014300 Ga0207668_100143002 466
194 3300050507 nmdc:mga05p37_250331_c1 nmdc:mga05p37_250331_c1_691_2091 466
195 3300050512 nmdc:mga0n895_252695_c1 nmdc:mga0n895_252695_c1_353_1762 466
196 3300050514 nmdc:mga08x19_2_c1 nmdc:mga08x19_2_c1_10032_11435 466
197 3300005288 Ga0065714_10002183 Ga0065714_10002183266 467
198 3300005290 Ga0065712_10000030 Ga0065712_10000030180 467
199 3300005293 Ga0065715_10093451 Ga0065715_100934513 467
200 3300005295 Ga0065707_10126823 Ga0065707_101268232 467
201 3300005295 Ga0065707_10128284 Ga0065707_101282841 467
202 3300005406 Ga0070703_10016863 Ga0070703_100168631 467
203 3300005444 Ga0070694_100000607 Ga0070694_1000006076 467
204 3300005468 Ga0070707_100000128 Ga0070707_1000001286 467
205 3300005471 Ga0070698_100017992 Ga0070698_1000179925 467
206 3300005471 Ga0070698_100221020 Ga0070698_1002210201 467
207 3300005617 Ga0068859_100004364 Ga0068859_1000043642 467
208 3300005618 Ga0068864_100087236 Ga0068864_1000872362 467
209 3300005844 Ga0068862_100083960 Ga0068862_1000839602 467
210 3300006173 Ga0070716_100000009 Ga0070716_10000000911 467
211 3300006931 Ga0097620_100004364 Ga0097620_1000043642 467
212 3300009094 Ga0111539_10074679 Ga0111539_100746793 467
213 3300009553 Ga0105249_10056232 Ga0105249_100562323 467
214 3300013297 Ga0157378_10028230 Ga0157378_100282304 467
215 3300025910 Ga0207684_10007421 Ga0207684_100074216 467
216 3300025922 Ga0207646_10001101 Ga0207646_1000110132 467
217 3300025939 Ga0207665_10000001 Ga0207665_10000001136 467
218 3300025941 Ga0207711_10057700 Ga0207711_100577002 467
219 3300026035 Ga0207703_10071144 Ga0207703_100711441 467
220 3300026088 Ga0207641_10179021 Ga0207641_101790211 467
221 3300026095 Ga0207676_10053528 Ga0207676_100535282 467
222 3300027907 Ga0207428_10011882 Ga0207428_100118822 467
223 3300028381 Ga0268264_10098088 Ga0268264_100980883 467
224 3300046664 Ga0495659_0020114 Ga0495659_0020114_169_1653 467
225 3300050511 nmdc:mga08y16_13131_c1 nmdc:mga08y16_13131_c1_3437_4921 467
226 3300005406 Ga0070703_10000157 Ga0070703_1000015718 468
227 3300005441 Ga0070700_100010712 Ga0070700_1000107124 468
228 3300005444 Ga0070694_100003869 Ga0070694_1000038695 468
229 3300005471 Ga0070698_100000010 Ga0070698_10000001059 468
230 3300005518 Ga0070699_100061863 Ga0070699_1000618632 468
231 3300013308 Ga0157375_10032239 Ga0157375_100322394 468
232 3300025885 Ga0207653_10000118 Ga0207653_1000011819 468
233 3300026075 Ga0207708_10018102 Ga0207708_100181025 468
234 3300009147 Ga0114129_10074758 Ga0114129_100747584 469
235 3300050507 nmdc:mga05p37_63834_c1 nmdc:mga05p37_63834_c1_1855_3369 469
236 3300006852 Ga0075433_10206655 Ga0075433_102066551 473
237 3300009147 Ga0114129_10003333 Ga0114129_1000333318 473
238 3300050515 nmdc:mga0a205_195652_c1 nmdc:mga0a205_195652_c1_253_1710 473
239 3300002074 JGI24748J21848_1000019 JGI24748J21848_100001926 474
240 3300002239 JGI24034J26672_10000003 JGI24034J26672_10000003270 474
241 3300005545 Ga0070695_100098665 Ga0070695_1000986651 474
242 3300005842 Ga0068858_100001045 Ga0068858_1000010458 474
243 3300009101 Ga0105247_10000003 Ga0105247_10000003267 474
244 3300025223 Ga0207672_1000052 Ga0207672_10000526 474
245 3300025900 Ga0207710_10000001 Ga0207710_100000011043 474
246 3300026035 Ga0207703_10001746 Ga0207703_100017468 474

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

325

475

0.86

PF07690

MFS_1

Major Facilitator Superfamily

45

414

0.85

PF00083

Sugar_tr

Sugar (and other) transporter

83

248

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.8584 90 444
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8495 45 449
8sc2-assembly1.cif.gz_A human oct1 bound to diltiazem in inward-open conformation 0.8421 90 444
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.8395 42 445
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.8368 42 447
ID Description Score Start End Superfamily
af_Q2G1N0_6_195_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9113 41 241 1.20.1250.20
af_Q4D047_16_187_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9026 48 237 1.20.1250.20
af_A0A1D6MTK3_190_317_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9022 85 197 1.20.1250.20
af_P37621_16_394_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8976 40 449 1.20.1250.20
af_Q2G1N0_215_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8915 39 236 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6J4M8V6-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.894 41 449 GO:0016020
GO:0022857
AF-A0A508VID3-F1-model_v4 deleted 0.8932 36 447
AF-A0A3U2TTH4-F1-model_v4 Uncharacterized MFS-type transporter YfcJ 0.8805 39 444 GO:0005886
GO:0022857
AF-A0A839VH75-F1-model_v4 Uncharacterized MFS-type transporter FHW66_002339 0.8792 39 449 GO:0005886
GO:0022857
AF-A0A4R9LMM3-F1-model_v4 MFS transporter 0.8789 45 449 GO:0016020
GO:0022857

Feature Viewer

pLDDT pTM Quality
79.2 0.78 High
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Predicted Structure (AlphaFold2)

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