F357674

General Info

Members Datasets Scaffolds Average Seq Length
245 178 490 212

Family's Representative Sequence

Representative Sequence 3300048913|Ga0496110_0250783|Ga0496110_0250783_634_1371
Length 245
Sequence MSWAREEMAARAAAELLDGSYVNLGIGLPTLVPNYVPDDVELVLQSENGILGIGAYPREADVDVDLINAGKETVTVRRGASFFDSATSFGMIRGGKIDAAILGAMQVSAKGDIANWMIPGKMVKGMGGAMDLVHGAKRVIVLMEHTAKDGSYKIVDECTLPYTGKGVVQRIITDLAVIDVVPDGLRLVELAPGVTQEEVAAKTEPPLLGPASRSNIRRWLARSQDNQLAAVVPRRTPTSLQGVSR

Samples

Sample ID Description Type Environment
1 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
77 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
78 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
79 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
89 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
90 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
91 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
92 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
93 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
94 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
95 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
102 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
119 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
155 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
156 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
157 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 2643221615 Nocardioides sp. Root224 Isolate Unclassified
162 2643221617 Nocardioides sp. Root79 Isolate Unclassified
163 2643221620 Nocardioides sp. Root240 Isolate Unclassified
164 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
165 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
166 2738541305 Nocardioides sp. CF167 Isolate Unclassified
167 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
168 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
169 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
170 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
171 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
172 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
173 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
174 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
175 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
176 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
177 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
178 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.43
Metatranscriptomes 0.41
Isolates 8.16

Biome Distribution

Category Percentage (%)
Aerial Root 0.82
Bulb 0
Endosphere 1.63
Nodule 0.41
Rhizoplane 13.06
Rhizosphere 73.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496110_0250783 3300048913 Bacteria 1611
2 LJQas_1008640 3300000549 Bacteria 1236
3 Ga0070683_100518786 3300005329 Bacteria 1139
4 Ga0068869_100048120 3300005334 Bacteria 3082
5 Ga0070682_100075656 3300005337 Bacteria 2166
6 Ga0070687_100250013 3300005343 Bacteria 1101
7 Ga0070671_100726175 3300005355 Bacteria 863
8 Ga0070659_100051986 3300005366 Bacteria 3222
9 Ga0070667_100012200 3300005367 Bacteria 7110
10 Ga0070709_10146112 3300005434 Bacteria 1629
11 Ga0070714_100009226 3300005435 Bacteria 7749
12 Ga0070714_100017918 3300005435 Bacteria 5742
13 Ga0070713_100057339 3300005436 Bacteria 3243
14 Ga0070713_100141258 3300005436 Bacteria 2133
15 Ga0070711_100182890 3300005439 Bacteria 1606
16 Ga0070708_100336390 3300005445 Bacteria 1423
17 Ga0070663_100555788 3300005455 Bacteria 960
18 Ga0070698_100019749 3300005471 Bacteria 7067
19 Ga0070679_100541280 3300005530 Bacteria 1108
20 Ga0070684_100236088 3300005535 Bacteria 1670
21 Ga0068855_100167487 3300005563 Bacteria 2490
22 Ga0068857_100717314 3300005577 Bacteria 951
23 Ga0068854_100459798 3300005578 Bacteria 1065
24 Ga0068852_100145783 3300005616 Bacteria 2196
25 Ga0075363_100008255 3300006048 Bacteria 4839
26 Ga0099795_10136850 3300007788 Bacteria 993
27 Ga0105245_10244570 3300009098 Bacteria 1741
28 Ga0105245_10845460 3300009098 Bacteria 955
29 Ga0105243_10042985 3300009148 Bacteria 3541
30 Ga0105248_10715088 3300009177 Bacteria 1130
31 Ga0105238_10610592 3300009551 Bacteria 1099
32 Ga0099796_10145959 3300010159 Bacteria 928
33 Ga0157369_10197777 3300013105 Bacteria 2110
34 Ga0157374_10565944 3300013296 Bacteria 1145
35 Ga0157378_10949245 3300013297 Bacteria 892
36 Ga0163162_10087959 3300013306 Bacteria 3186
37 Ga0157372_10926205 3300013307 Bacteria 1010
38 Ga0163163_10150886 3300014325 Bacteria 2368
39 Ga0157380_10963831 3300014326 Bacteria 884
40 Ga0157377_10005113 3300014745 Bacteria 6130
41 Ga0157376_10310560 3300014969 Bacteria 1496
42 Ga0157376_10458510 3300014969 Bacteria 1245
43 Ga0206353_10457239 3300020082 Bacteria 1056
44 Ga0207692_10104916 3300025898 Bacteria 1558
45 Ga0207688_10062146 3300025901 Bacteria 2106
46 Ga0207699_10466786 3300025906 Bacteria 907
47 Ga0207643_10197327 3300025908 Bacteria 1224
48 Ga0207707_10136106 3300025912 Bacteria 2148
49 Ga0207671_10148760 3300025914 Bacteria 1808
50 Ga0207663_10150862 3300025916 Bacteria 1630
51 Ga0207649_10354667 3300025920 Bacteria 1087
52 Ga0207652_10378785 3300025921 Bacteria 1277
53 Ga0207700_10040345 3300025928 Bacteria 3406
54 Ga0207700_10048857 3300025928 Bacteria 3144
55 Ga0207700_10689879 3300025928 Bacteria 911
56 Ga0207664_10024286 3300025929 Bacteria 4554
57 Ga0207664_10225323 3300025929 Bacteria 1628
58 Ga0207669_10126716 3300025937 Bacteria 1746
59 Ga0207711_10577747 3300025941 Bacteria 1048
60 Ga0207689_10061078 3300025942 Bacteria 3099
61 Ga0207661_10764934 3300025944 Bacteria 889
62 Ga0207667_10136389 3300025949 Bacteria 2527
63 Ga0207708_10130778 3300026075 Bacteria 1962
64 Ga0207683_10047785 3300026121 Bacteria 3747
65 Ga0265318_10150368 3300028577 Bacteria 854
66 Ga0265338_10001947 3300028800 Bacteria 32225
67 Ga0265338_10012580 3300028800 Bacteria 9640
68 Ga0265338_10015449 3300028800 Bacteria 8383
69 Ga0265325_10027268 3300031241 Bacteria 3088
70 Ga0265331_10018430 3300031250 Bacteria 3621
71 Ga0265316_10252227 3300031344 Bacteria 1295
72 Ga0265313_10010803 3300031595 Bacteria 5734
73 Ga0316575_10007994 3300031665 Bacteria 3841
74 Ga0265342_10025608 3300031712 Bacteria 3706
75 Ga0316576_10002752 3300031727 Bacteria 10086
76 Ga0316576_10003561 3300031727 Bacteria 9166
77 Ga0316576_10004908 3300031727 Bacteria 8092
78 Ga0316576_10074595 3300031727 Bacteria 2508
79 Ga0316578_10027633 3300031728 Bacteria 3207
80 Ga0316578_10176320 3300031728 Bacteria 1288
81 Ga0307405_10073715 3300031731 Bacteria 2205
82 Ga0316577_10112176 3300031733 Bacteria 1530
83 Ga0316577_10193209 3300031733 Bacteria 1150
84 Ga0307410_10069189 3300031852 Bacteria 2441
85 Ga0307410_10245609 3300031852 Bacteria 1389
86 Ga0307407_10036331 3300031903 Bacteria 2714
87 Ga0307407_10220185 3300031903 Bacteria 1283
88 Ga0307409_100343576 3300031995 Bacteria 1405
89 Ga0307416_100254956 3300032002 Bacteria 1710
90 Ga0307416_101094084 3300032002 Bacteria 901
91 Ga0307416_101686937 3300032002 Bacteria 738
92 Ga0307415_100059015 3300032126 Bacteria 2644
93 Ga0307415_100074714 3300032126 Bacteria 2396
94 Ga0307415_100493724 3300032126 Bacteria 1068
95 Ga0316583_10015337 3300032133 Bacteria 2757
96 Ga0316580_10031198 3300032139 Bacteria 1650
97 Ga0316580_10039591 3300032139 Bacteria 1456
98 Ga0316214_1005923 3300033545 Bacteria 1609
99 Ga0316212_1011250 3300033547 Bacteria 1280
100 Ga0316574_0000963 3300035398 Bacteria 12892
101 Ga0316574_0013617 3300035398 Bacteria 4680
102 Ga0316574_0076939 3300035398 Bacteria 2114
103 Ga0316582_0024795 3300036647 Bacteria 3593
104 Ga0316582_0035701 3300036647 Bacteria 3072
105 Ga0316584_0002232 3300036712 Bacteria 12149
106 Ga0316584_0020055 3300036712 Bacteria 4842
107 Ga0373925_0000004 3300037068 Bacteria 361597
108 Ga0395899_0315714 3300037312 Bacteria 1054
109 Ga0395900_0020056 3300037418 Bacteria 6818
110 Ga0395900_0050409 3300037418 Bacteria 4288
111 Ga0395898_0004612 3300037466 Bacteria 15039
112 Ga0395898_0023387 3300037466 Bacteria 6246
113 Ga0395905_0005218 3300037471 Bacteria 13301
114 Ga0395905_0063715 3300037471 Bacteria 3449
115 Ga0395901_0003526 3300038443 Bacteria 15763
116 Ga0395901_0203478 3300038443 Bacteria 2075
117 Ga0439466_0018960 3300041411 Bacteria 2464
118 Ga0451791_0111249 3300041451 Bacteria 748
119 Ga0451793_0403864 3300041452 Bacteria 2078
120 Ga0451841_1146338 3300041498 Bacteria 2496
121 Ga0451843_0530166 3300041509 Bacteria 2021
122 Ga0439433_0074645 3300041999 Bacteria 819
123 Ga0439432_106323 3300042006 Bacteria 837
124 Ga0450910_033889 3300042147 Bacteria 809
125 Ga0466972_0059908 3300044658 Bacteria 1827
126 Ga0466965_0086425 3300044683 Bacteria 1591
127 Ga0466966_0269292 3300044684 Bacteria 1025
128 Ga0466961_0011466 3300044693 Bacteria 5669
129 Ga0466963_0037716 3300044694 Bacteria 3158
130 Ga0466963_0076148 3300044694 Bacteria 2265
131 Ga0466964_0061788 3300044706 Bacteria 1560
132 Ga0466964_0396529 3300044706 Bacteria 720
133 Ga0466968_0023324 3300044735 Bacteria 2520
134 Ga0466970_0030729 3300044765 Bacteria 2833
135 Ga0466957_0005538 3300044842 Bacteria 7091
136 Ga0466957_0235330 3300044842 Bacteria 1214
137 Ga0466960_0007343 3300044901 Bacteria 4473
138 Ga0466960_0073939 3300044901 Bacteria 1702
139 Ga0466959_0339858 3300045049 Bacteria 1024
140 Ga0466967_0067741 3300045976 Bacteria 3185
141 Ga0466967_0105749 3300045976 Bacteria 2578
142 Ga0495653_0232839 3300046463 Bacteria 1232
143 Ga0495664_0423143 3300046477 Bacteria 799
144 Ga0495608_0399557 3300046511 Bacteria 841
145 Ga0495652_0393586 3300046529 Bacteria 983
146 Ga0495622_0036371 3300046557 Bacteria 2296
147 Ga0495667_0310822 3300046559 Bacteria 998
148 Ga0495635_0148675 3300046663 Bacteria 1595
149 Ga0495658_0153263 3300046683 Bacteria 1417
150 Ga0495669_0005433 3300046684 Bacteria 5318
151 Ga0495613_0437126 3300046689 Bacteria 888
152 Ga0495624_0301620 3300046690 Bacteria 966
153 Ga0495672_0030878 3300047320 Bacteria 3352
154 Ga0495593_0143353 3300047673 Bacteria 1210
155 Ga0496100_0040766 3300048903 Bacteria 2957
156 Ga0496103_0073302 3300048906 Bacteria 2145
157 Ga0496104_0002549 3300048907 Bacteria 15697
158 Ga0496104_0283406 3300048907 Bacteria 1570
159 Ga0496104_0370513 3300048907 Bacteria 1345
160 Ga0496104_0554654 3300048907 Bacteria 1060
161 Ga0496105_0005322 3300048908 Bacteria 9753
162 Ga0496105_0304608 3300048908 Bacteria 1280
163 Ga0496108_0025542 3300048911 Bacteria 4868
164 Ga0496108_0088968 3300048911 Bacteria 2624
165 Ga0496108_0163285 3300048911 Bacteria 1926
166 Ga0496109_0010421 3300048912 Bacteria 7939
167 Ga0496109_0129636 3300048912 Bacteria 2353
168 Ga0496109_0907021 3300048912 Bacteria 819
169 Ga0496109_0955408 3300048912 Bacteria 795
170 Ga0496110_0008836 3300048913 Bacteria 8116
171 Ga0496110_0012435 3300048913 Bacteria 7000
172 Ga0496110_0687340 3300048913 Bacteria 924
173 Ga0496111_0033432 3300048914 Bacteria 3667
174 Ga0496114_0006186 3300048917 Bacteria 9424
175 Ga0496114_0043089 3300048917 Bacteria 3743
176 Ga0496114_0044918 3300048917 Bacteria 3667
177 Ga0496114_0099698 3300048917 Bacteria 2478
178 Ga0496114_0152130 3300048917 Bacteria 2008
179 Ga0496114_0161629 3300048917 Bacteria 1948
180 Ga0496114_0315451 3300048917 Bacteria 1381
181 Ga0496114_0399797 3300048917 Bacteria 1217
182 Ga0496114_0480850 3300048917 Bacteria 1099
183 Ga0496115_0141203 3300048918 Bacteria 1987
184 Ga0496119_0000065 3300048922 Bacteria 164183
185 Ga0496120_0027758 3300048923 Bacteria 3477
186 Ga0496126_0021158 3300048929 Bacteria 6360
187 Ga0496126_0177786 3300048929 Bacteria 1809
188 Ga0501031_0012861 3300049568 Bacteria 5468
189 Ga0501033_0000664 3300049570 Bacteria 31787
190 Ga0501033_0092681 3300049570 Bacteria 2209
191 Ga0501034_0007122 3300049571 Bacteria 11928
192 Ga0501034_0536976 3300049571 Bacteria 1080
193 Ga0501036_0006804 3300049572 Bacteria 9288
194 Ga0501036_0193680 3300049572 Bacteria 1710
195 Ga0501037_0006074 3300049573 Bacteria 8823
196 Ga0501039_0001195 3300049575 Bacteria 19033
197 Ga0501039_0027913 3300049575 Bacteria 4341
198 Ga0501040_0016019 3300049576 Bacteria 4956
199 Ga0501041_0008820 3300049577 Bacteria 5935
200 Ga0501042_0271352 3300049578 Bacteria 1225
201 Ga0501043_0048953 3300049579 Bacteria 3322
202 Ga0501043_0120911 3300049579 Bacteria 2054
203 Ga0501046_0000154 3300049580 Bacteria 71052
204 Ga0501046_0412966 3300049580 Bacteria 974
205 Ga0501048_0066619 3300049582 Bacteria 2546
206 Ga0501068_0030046 3300049584 Bacteria 3221
207 Ga0501070_0858422 3300049586 Bacteria 710
208 Ga0501071_0038223 3300049587 Bacteria 3429
209 Ga0501071_0055378 3300049587 Bacteria 2863
210 Ga0501075_0005645 3300049591 Bacteria 8561
211 Ga0501077_0047540 3300049593 Bacteria 2726
212 Ga0501079_0008493 3300049741 Bacteria 7788
213 Ga0501081_0042301 3300049743 Bacteria 3121
214 Ga0501035_0018952 3300049822 Bacteria 6338
215 Ga0501035_0097733 3300049822 Bacteria 2578
216 nmdc:mga0yw44_135175_c1 3300050492 Bacteria 1599
217 Ga0495595_0310199 3300053084 Bacteria 794
218 Ga0495619_0132073 3300053085 Bacteria 1716
219 Ga0495619_0428054 3300053085 Bacteria 913
220 Ga0500593_000055 3300053117 Bacteria 41530
221 Ga0500568_0041560 3300053139 Bacteria 1847
222 Ga0501084_0023020 3300054114 Bacteria 5200
223 Ga0501084_0216824 3300054114 Bacteria 1615
224 Ga0501082_0121884 3300060353 Bacteria 2260
225 Ga0530510_0326051 3300061734 Bacteria 1151
226 2644093321 2643221615 Bacteria 5487866
227 2644098710 2643221617 Bacteria 5139111
228 2644116071 2643221620 Bacteria 5134593
229 2644322931 2643221657 Bacteria 5490246
230 2689996594 2687453743 Bacteria 8361025
231 2738871028 2738541305 Bacteria 4910150
232 2774391778 2773857762 Bacteria 5971770
233 2809197422 2808606439 Bacteria 5952208
234 2812352324 2811994878 Bacteria 5992952
235 2812354910 2811994879 Bacteria 9313447
236 2819613104 2818991448 Bacteria 6772224
237 2857482398 2857481737 Bacteria 4761446
238 2857485328 2857481737 Bacteria 4761446
239 2862509950 2862507626 Bacteria 9425308
240 2862512355 2862507626 Bacteria 9425308
241 2891970022 2891968417 Bacteria 5821697
242 2929200200 2929199973 Bacteria 7260745
243 2984579356 2984576629 Bacteria 4248407
244 2990256967 2990256926 Bacteria 4252839
245 8055912164 8055909800 Bacteria 7278581
246 Ga0496110_0250783
247 LJQas_1008640
248 Ga0070683_100518786
249 Ga0068869_100048120
250 Ga0070682_100075656
251 Ga0070687_100250013
252 Ga0070671_100726175
253 Ga0070659_100051986
254 Ga0070667_100012200
255 Ga0070709_10146112
256 Ga0070714_100009226
257 Ga0070714_100017918
258 Ga0070713_100057339
259 Ga0070713_100141258
260 Ga0070711_100182890
261 Ga0070708_100336390
262 Ga0070663_100555788
263 Ga0070698_100019749
264 Ga0070679_100541280
265 Ga0070684_100236088
266 Ga0068855_100167487
267 Ga0068857_100717314
268 Ga0068854_100459798
269 Ga0068852_100145783
270 Ga0075363_100008255
271 Ga0099795_10136850
272 Ga0105245_10244570
273 Ga0105245_10845460
274 Ga0105243_10042985
275 Ga0105248_10715088
276 Ga0105238_10610592
277 Ga0099796_10145959
278 Ga0157369_10197777
279 Ga0157374_10565944
280 Ga0157378_10949245
281 Ga0163162_10087959
282 Ga0157372_10926205
283 Ga0163163_10150886
284 Ga0157380_10963831
285 Ga0157377_10005113
286 Ga0157376_10310560
287 Ga0157376_10458510
288 Ga0206353_10457239
289 Ga0207692_10104916
290 Ga0207688_10062146
291 Ga0207699_10466786
292 Ga0207643_10197327
293 Ga0207707_10136106
294 Ga0207671_10148760
295 Ga0207663_10150862
296 Ga0207649_10354667
297 Ga0207652_10378785
298 Ga0207700_10040345
299 Ga0207700_10048857
300 Ga0207700_10689879
301 Ga0207664_10024286
302 Ga0207664_10225323
303 Ga0207669_10126716
304 Ga0207711_10577747
305 Ga0207689_10061078
306 Ga0207661_10764934
307 Ga0207667_10136389
308 Ga0207708_10130778
309 Ga0207683_10047785
310 Ga0265318_10150368
311 Ga0265338_10001947
312 Ga0265338_10012580
313 Ga0265338_10015449
314 Ga0265325_10027268
315 Ga0265331_10018430
316 Ga0265316_10252227
317 Ga0265313_10010803
318 Ga0316575_10007994
319 Ga0265342_10025608
320 Ga0316576_10002752
321 Ga0316576_10003561
322 Ga0316576_10004908
323 Ga0316576_10074595
324 Ga0316578_10027633
325 Ga0316578_10176320
326 Ga0307405_10073715
327 Ga0316577_10112176
328 Ga0316577_10193209
329 Ga0307410_10069189
330 Ga0307410_10245609
331 Ga0307407_10036331
332 Ga0307407_10220185
333 Ga0307409_100343576
334 Ga0307416_100254956
335 Ga0307416_101094084
336 Ga0307416_101686937
337 Ga0307415_100059015
338 Ga0307415_100074714
339 Ga0307415_100493724
340 Ga0316583_10015337
341 Ga0316580_10031198
342 Ga0316580_10039591
343 Ga0316214_1005923
344 Ga0316212_1011250
345 Ga0316574_0000963
346 Ga0316574_0013617
347 Ga0316574_0076939
348 Ga0316582_0024795
349 Ga0316582_0035701
350 Ga0316584_0002232
351 Ga0316584_0020055
352 Ga0373925_0000004
353 Ga0395899_0315714
354 Ga0395900_0020056
355 Ga0395900_0050409
356 Ga0395898_0004612
357 Ga0395898_0023387
358 Ga0395905_0005218
359 Ga0395905_0063715
360 Ga0395901_0003526
361 Ga0395901_0203478
362 Ga0439466_0018960
363 Ga0451791_0111249
364 Ga0451793_0403864
365 Ga0451841_1146338
366 Ga0451843_0530166
367 Ga0439433_0074645
368 Ga0439432_106323
369 Ga0450910_033889
370 Ga0466972_0059908
371 Ga0466965_0086425
372 Ga0466966_0269292
373 Ga0466961_0011466
374 Ga0466963_0037716
375 Ga0466963_0076148
376 Ga0466964_0061788
377 Ga0466964_0396529
378 Ga0466968_0023324
379 Ga0466970_0030729
380 Ga0466957_0005538
381 Ga0466957_0235330
382 Ga0466960_0007343
383 Ga0466960_0073939
384 Ga0466959_0339858
385 Ga0466967_0067741
386 Ga0466967_0105749
387 Ga0495653_0232839
388 Ga0495664_0423143
389 Ga0495608_0399557
390 Ga0495652_0393586
391 Ga0495622_0036371
392 Ga0495667_0310822
393 Ga0495635_0148675
394 Ga0495658_0153263
395 Ga0495669_0005433
396 Ga0495613_0437126
397 Ga0495624_0301620
398 Ga0495672_0030878
399 Ga0495593_0143353
400 Ga0496100_0040766
401 Ga0496103_0073302
402 Ga0496104_0002549
403 Ga0496104_0283406
404 Ga0496104_0370513
405 Ga0496104_0554654
406 Ga0496105_0005322
407 Ga0496105_0304608
408 Ga0496108_0025542
409 Ga0496108_0088968
410 Ga0496108_0163285
411 Ga0496109_0010421
412 Ga0496109_0129636
413 Ga0496109_0907021
414 Ga0496109_0955408
415 Ga0496110_0008836
416 Ga0496110_0012435
417 Ga0496110_0687340
418 Ga0496111_0033432
419 Ga0496114_0006186
420 Ga0496114_0043089
421 Ga0496114_0044918
422 Ga0496114_0099698
423 Ga0496114_0152130
424 Ga0496114_0161629
425 Ga0496114_0315451
426 Ga0496114_0399797
427 Ga0496114_0480850
428 Ga0496115_0141203
429 Ga0496119_0000065
430 Ga0496120_0027758
431 Ga0496126_0021158
432 Ga0496126_0177786
433 Ga0501031_0012861
434 Ga0501033_0000664
435 Ga0501033_0092681
436 Ga0501034_0007122
437 Ga0501034_0536976
438 Ga0501036_0006804
439 Ga0501036_0193680
440 Ga0501037_0006074
441 Ga0501039_0001195
442 Ga0501039_0027913
443 Ga0501040_0016019
444 Ga0501041_0008820
445 Ga0501042_0271352
446 Ga0501043_0048953
447 Ga0501043_0120911
448 Ga0501046_0000154
449 Ga0501046_0412966
450 Ga0501048_0066619
451 Ga0501068_0030046
452 Ga0501070_0858422
453 Ga0501071_0038223
454 Ga0501071_0055378
455 Ga0501075_0005645
456 Ga0501077_0047540
457 Ga0501079_0008493
458 Ga0501081_0042301
459 Ga0501035_0018952
460 Ga0501035_0097733
461 nmdc:mga0yw44_135175_c1
462 Ga0495595_0310199
463 Ga0495619_0132073
464 Ga0495619_0428054
465 Ga0500593_000055
466 Ga0500568_0041560
467 Ga0501084_0023020
468 Ga0501084_0216824
469 Ga0501082_0121884
470 Ga0530510_0326051
471 2644093321
472 2644098710
473 2644116071
474 2644322931
475 2689996594
476 2738871028
477 2774391778
478 2809197422
479 2812352324
480 2812354910
481 2819613104
482 2857482398
483 2857485328
484 2862509950
485 2862512355
486 2891970022
487 2929200200
488 2984579356
489 2990256967
490 8055912164

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01144

CoA_trans

Coenzyme A transferase

5

202

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k6m-assembly2.cif.gz_C dynamic domains of succinyl-coa:3-ketoacid-coenzyme a transferase from pig heart. 0.8643 5 210
3oxo-assembly3.cif.gz_E succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8551 8 210
3oxo-assembly3.cif.gz_F succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8543 8 210
4kgb-assembly1.cif.gz_B structure of succinyl-coa: 3-ketoacid coa transferase from drosophila melanogaster 0.852 5 210
3oxo-assembly4.cif.gz_H succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8518 11 210
ID Description Score Start End Superfamily
af_P32144_74_134_3.30.750.70 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;4-hydroxybutyrate coenzyme 0.83 5 47 3.30.750.70
5dbnD00 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.8237 3 210 3.40.1080.10
2nrcB02 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.8159 5 210 3.40.1080.10
5dbnD00 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.8027 3 210 3.40.1080.10
2nrcB02 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.7978 5 210 3.40.1080.10
ID Description Score Start End GO Terms
AF-A0A3B9RKH2-F1-model_v4 deleted 0.9567 123 210
AF-A0A3D6EHS8-F1-model_v4 Succinyl-CoA--3-ketoacid-CoA transferase 0.9487 121 210 GO:0008410
AF-A0A5A4WCF4-F1-model_v4 deleted 0.9408 91 210
AF-A0A7K0VCS9-F1-model_v4 Succinyl-CoA--3-ketoacid-CoA transferase 0.9404 100 210 GO:0008410
AF-A0A6J6BBU6-F1-model_v4 Unannotated protein 0.9396 91 210 GO:0008410

Map