F357562

General Info

Members Datasets Scaffolds Average Seq Length
245 133 245 284

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_0271067|Ga0436363_0271067_2302_3249
Length 315
Sequence MPELPEVETIRRQLAPHLEGRTIVEAQILDPRWTRPAAPAALEAELRGAHVRRVSRAGKYLVWSLSGERYLLMHLRMTGTLLFDPIAPPPNTRVMLGLDDGHRLVYVDPRRFGTGHLLHGVSARDDYLAARIGIEPLTPAFTAQHLRILGQGRTAPIKAFVLDQRRIAGVGNIYADEALFRAGIHPLRPAGRLTAGDWARLREGIEQALSAGIEAKGASIDDFRHLDGARGSFQDLFLVHRRAGQPCPRCGRTIRKIVVGGRGTYVCERCQPRPRRRAAGSAGAREPLARFSERSTSRSISSSPLAATGVRRPVR

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
65 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
66 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
74 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
75 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
76 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
80 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
128 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300059646 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 42R_SW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
132 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
133 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.37
Metatranscriptomes 1.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.35
Rhizosphere 78.37
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100099134 3300005329 Bacteria 2742
2 Ga0070683_100161081 3300005329 Bacteria 2129
3 Ga0070683_100250460 3300005329 Bacteria 1685
4 Ga0068869_100404073 3300005334 Bacteria 1124
5 Ga0070680_100540044 3300005336 Bacteria 999
6 Ga0068868_100247732 3300005338 Bacteria 1499
7 Ga0070661_100498088 3300005344 Bacteria 975
8 Ga0070692_10017597 3300005345 Bacteria 3421
9 Ga0070669_100103181 3300005353 Bacteria 2154
10 Ga0070674_100135216 3300005356 Bacteria 1843
11 Ga0070714_100008055 3300005435 Bacteria 8213
12 Ga0070714_100079821 3300005435 Bacteria 2845
13 Ga0070714_100362271 3300005435 Bacteria 1363
14 Ga0070713_100108663 3300005436 Bacteria 2415
15 Ga0070713_100184639 3300005436 Bacteria 1876
16 Ga0070710_10000004 3300005437 Bacteria 270399
17 Ga0070710_10009809 3300005437 Bacteria 4693
18 Ga0070711_100234701 3300005439 Bacteria 1431
19 Ga0070705_100030076 3300005440 Bacteria 2995
20 Ga0070700_100188777 3300005441 Bacteria 1439
21 Ga0070663_100123963 3300005455 Bacteria 1955
22 Ga0070662_100090739 3300005457 Bacteria 2294
23 Ga0068867_100163488 3300005459 Bacteria 1757
24 Ga0070684_100050454 3300005535 Bacteria 3614
25 Ga0070684_100189256 3300005535 Bacteria 1872
26 Ga0070664_100026021 3300005564 Bacteria 4851
27 Ga0068856_100015803 3300005614 Bacteria 7300
28 Ga0068856_100135388 3300005614 Bacteria 2469
29 Ga0068861_100118036 3300005719 Bacteria 2136
30 Ga0081538_10008105 3300005981 Bacteria 8970
31 Ga0081538_10136356 3300005981 Bacteria 1142
32 Ga0081539_10018170 3300005985 Bacteria 4894
33 Ga0070717_10000001 3300006028 Bacteria 465573
34 Ga0070717_10010578 3300006028 Bacteria 6970
35 Ga0070717_10101574 3300006028 Bacteria 2442
36 Ga0070712_100000022 3300006175 Bacteria 81392
37 Ga0070712_100012276 3300006175 Bacteria 5445
38 Ga0075428_100403064 3300006844 Bacteria 1466
39 Ga0105240_10032414 3300009093 Bacteria 6764
40 Ga0111539_10065385 3300009094 Bacteria 4297
41 Ga0105245_10295358 3300009098 Bacteria 1588
42 Ga0105243_10018056 3300009148 Bacteria 5337
43 Ga0105243_10271016 3300009148 Bacteria 1524
44 Ga0105239_10087180 3300010375 Bacteria 3441
45 Ga0105239_10951538 3300010375 Bacteria 986
46 Ga0105239_10992901 3300010375 Bacteria 965
47 Ga0105246_10045170 3300011119 Bacteria 2998
48 Ga0105246_10625550 3300011119 Bacteria 934
49 Ga0157369_10165124 3300013105 Bacteria 2336
50 Ga0157372_10737600 3300013307 Bacteria 1145
51 Ga0157375_10338098 3300013308 Bacteria 1671
52 Ga0163161_10203494 3300017792 Bacteria 1526
53 Ga0213874_10001046 3300021377 Bacteria 5672
54 Ga0213874_10036061 3300021377 Bacteria 1456
55 Ga0213876_10020291 3300021384 Bacteria 3512
56 Ga0213876_10020339 3300021384 Bacteria 3508
57 Ga0213876_10027966 3300021384 Bacteria 2974
58 Ga0213876_10057592 3300021384 Bacteria 2052
59 Ga0213876_10129997 3300021384 Bacteria 1338
60 Ga0213875_10002673 3300021388 Bacteria 10519
61 Ga0213875_10011223 3300021388 Bacteria 4464
62 Ga0213875_10016430 3300021388 Bacteria 3588
63 Ga0213875_10021867 3300021388 Bacteria 3061
64 Ga0207692_10000002 3300025898 Bacteria 453100
65 Ga0207692_10003466 3300025898 Bacteria 6166
66 Ga0207688_10038543 3300025901 Bacteria 2653
67 Ga0207695_10030451 3300025913 Bacteria 5939
68 Ga0207695_10056861 3300025913 Bacteria 4068
69 Ga0207693_10000165 3300025915 Bacteria 59717
70 Ga0207693_10045084 3300025915 Bacteria 3465
71 Ga0207652_10403713 3300025921 Bacteria 1233
72 Ga0207681_10005680 3300025923 Bacteria 7659
73 Ga0207700_10143016 3300025928 Bacteria 1968
74 Ga0207700_10227136 3300025928 Bacteria 1585
75 Ga0207664_10001317 3300025929 Bacteria 16353
76 Ga0207664_10002416 3300025929 Bacteria 12350
77 Ga0207664_10410235 3300025929 Bacteria 1206
78 Ga0207706_10092814 3300025933 Bacteria 2655
79 Ga0207669_10286077 3300025937 Bacteria 1246
80 Ga0207661_10529367 3300025944 Bacteria 1078
81 Ga0207712_10043380 3300025961 Bacteria 3102
82 Ga0207712_10467771 3300025961 Bacteria 1072
83 Ga0207678_10213375 3300026067 Bacteria 1651
84 Ga0207708_10006344 3300026075 Bacteria 8767
85 Ga0207702_10020629 3300026078 Bacteria 5454
86 Ga0207641_10239002 3300026088 Bacteria 1692
87 Ga0207674_10115548 3300026116 Bacteria 2655
88 Ga0207675_100753174 3300026118 Bacteria 985
89 Ga0265319_1000513 3300028563 Bacteria 26674
90 Ga0307413_10234474 3300031824 Bacteria 1350
91 Ga0307406_10292260 3300031901 Bacteria 1248
92 Ga0307409_100097359 3300031995 Bacteria 2430
93 Ga0307409_100435050 3300031995 Bacteria 1262
94 Ga0307416_100167934 3300032002 Bacteria 2038
95 Ga0307416_100469135 3300032002 Bacteria 1316
96 Ga0307415_100057536 3300032126 Bacteria 2672
97 Ga0373953_0017112 3300035117 Bacteria 2659
98 Ga0373957_0070201 3300035120 Bacteria 1369
99 Ga0373924_0055373 3300035410 Bacteria 1651
100 Ga0395898_0262980 3300037466 Bacteria 1646
101 Ga0436364_0250330 3300037853 Bacteria 6071
102 Ga0436364_0388370 3300037853 Bacteria 4629
103 Ga0436364_0397395 3300037853 Bacteria 30067
104 Ga0436364_0649215 3300037853 Bacteria 7717
105 Ga0436364_0818586 3300037853 Bacteria 35613
106 Ga0436364_0825803 3300037853 Bacteria 5641
107 Ga0436364_1149474 3300037853 Bacteria 1485
108 Ga0395901_0255544 3300038443 Bacteria 1825
109 Ga0395901_0259833 3300038443 Bacteria 1808
110 Ga0436365_0322180 3300039437 Bacteria 1422
111 Ga0436365_0598211 3300039437 Bacteria 2362
112 Ga0436365_0743400 3300039437 Bacteria 11117
113 Ga0436365_0768419 3300039437 Bacteria 14379
114 Ga0436365_0936941 3300039437 Bacteria 2149
115 Ga0436365_1382979 3300039437 Bacteria 6506
116 Ga0436365_1709683 3300039437 Bacteria 11056
117 Ga0436365_1715885 3300039437 Bacteria 5322
118 Ga0436365_1792165 3300039437 Bacteria 2262
119 Ga0436363_0019431 3300039450 Bacteria 15994
120 Ga0436363_0055446 3300039450 Bacteria 6147
121 Ga0436363_0271067 3300039450 Bacteria 3849
122 Ga0436363_0347549 3300039450 Bacteria 5428
123 Ga0436363_0747084 3300039450 Bacteria 2074
124 Ga0436363_0828025 3300039450 Bacteria 1950
125 Ga0436362_0176071 3300039453 Bacteria 4003
126 Ga0436362_0606446 3300039453 Bacteria 2108
127 Ga0436362_0722911 3300039453 Bacteria 7170
128 Ga0451807_2191608 3300041486 Bacteria 1914
129 Ga0451841_0842985 3300041498 Bacteria 1513
130 Ga0466969_0013573 3300044656 Bacteria 4289
131 Ga0466966_0131529 3300044684 Bacteria 1532
132 Ga0466961_0023041 3300044693 Bacteria 4005
133 Ga0466961_0045452 3300044693 Bacteria 2809
134 Ga0466963_0003008 3300044694 Bacteria 9540
135 Ga0466963_0091512 3300044694 Bacteria 2072
136 Ga0466963_0127979 3300044694 Bacteria 1752
137 Ga0466963_0157037 3300044694 Bacteria 1582
138 Ga0466963_0195687 3300044694 Bacteria 1413
139 Ga0466964_0091515 3300044706 Bacteria 1324
140 Ga0466971_0025923 3300044719 Bacteria 2619
141 Ga0466971_0124373 3300044719 Bacteria 1195
142 Ga0466968_0005843 3300044735 Bacteria 4619
143 Ga0466968_0052789 3300044735 Bacteria 1740
144 Ga0466968_0055287 3300044735 Bacteria 1703
145 Ga0466970_0081589 3300044765 Bacteria 1749
146 Ga0466957_0001985 3300044842 Bacteria 10897
147 Ga0466957_0018838 3300044842 Bacteria 4058
148 Ga0466957_0058857 3300044842 Bacteria 2354
149 Ga0466957_0064745 3300044842 Bacteria 2250
150 Ga0466957_0086081 3300044842 Bacteria 1964
151 Ga0466957_0112163 3300044842 Bacteria 1730
152 Ga0466959_0000609 3300045049 Bacteria 20893
153 Ga0466959_0007165 3300045049 Bacteria 7805
154 Ga0466959_0039375 3300045049 Bacteria 3493
155 Ga0466959_0094356 3300045049 Bacteria 2147
156 Ga0466959_0094606 3300045049 Bacteria 2143
157 Ga0466959_0102375 3300045049 Bacteria 2050
158 Ga0466959_0198280 3300045049 Bacteria 1398
159 Ga0466958_0002243 3300045836 Bacteria 9631
160 Ga0466958_0004093 3300045836 Bacteria 7656
161 Ga0466958_0024093 3300045836 Bacteria 3579
162 Ga0466958_0077625 3300045836 Bacteria 2040
163 Ga0466958_0127504 3300045836 Bacteria 1596
164 Ga0466958_0289666 3300045836 Bacteria 1050
165 Ga0466967_0008860 3300045976 Bacteria 7417
166 Ga0466967_0025134 3300045976 Bacteria 4908
167 Ga0466967_0041430 3300045976 Bacteria 3970
168 Ga0466967_0090355 3300045976 Bacteria 2781
169 Ga0466967_0134132 3300045976 Bacteria 2302
170 Ga0466967_0156134 3300045976 Bacteria 2137
171 Ga0466967_0304064 3300045976 Bacteria 1535
172 Ga0466967_0410255 3300045976 Bacteria 1319
173 Ga0495592_0020240 3300046454 Bacteria 5063
174 Ga0495653_0053205 3300046463 Bacteria 3098
175 Ga0495653_0162195 3300046463 Bacteria 1551
176 Ga0495608_0037038 3300046511 Bacteria 3281
177 Ga0495618_0083334 3300046514 Bacteria 2043
178 Ga0495628_0071769 3300046516 Bacteria 2698
179 Ga0495667_0036822 3300046559 Bacteria 3262
180 Ga0495604_0000465 3300047317 Bacteria 35842
181 Ga0495604_0154429 3300047317 Bacteria 1627
182 Ga0496100_0002038 3300048903 Bacteria 10123
183 Ga0496100_0400139 3300048903 Bacteria 1046
184 Ga0496101_0025334 3300048904 Bacteria 4115
185 Ga0496102_0000027 3300048905 Bacteria 225466
186 Ga0496103_0000062 3300048906 Bacteria 129593
187 Ga0496104_0000026 3300048907 Bacteria 210098
188 Ga0496104_0229086 3300048907 Bacteria 1770
189 Ga0496104_0293835 3300048907 Bacteria 1537
190 Ga0496108_0110268 3300048911 Bacteria 2352
191 Ga0496110_0001081 3300048913 Bacteria 19206
192 Ga0496110_0132891 3300048913 Bacteria 2248
193 Ga0496110_0170915 3300048913 Bacteria 1972
194 Ga0496111_0000006 3300048914 Bacteria 107643
195 Ga0496112_0018592 3300048915 Bacteria 6547
196 Ga0496112_0191534 3300048915 Bacteria 2007
197 Ga0496113_0196789 3300048916 Bacteria 1601
198 Ga0496113_0478931 3300048916 Bacteria 1000
199 Ga0496121_0167669 3300048924 Bacteria 1599
200 Ga0501031_0089330 3300049568 Bacteria 2009
201 Ga0501034_0243338 3300049571 Bacteria 1745
202 Ga0501036_0360404 3300049572 Bacteria 1214
203 Ga0501038_0142719 3300049574 Bacteria 1958
204 Ga0501039_0090942 3300049575 Bacteria 2378
205 Ga0501039_0189085 3300049575 Bacteria 1619
206 Ga0501041_0059056 3300049577 Bacteria 2348
207 Ga0501041_0076425 3300049577 Bacteria 2060
208 Ga0501041_0283361 3300049577 Bacteria 1043
209 Ga0501042_0138485 3300049578 Bacteria 1754
210 Ga0501048_0041416 3300049582 Bacteria 3299
211 Ga0501048_0060448 3300049582 Bacteria 2685
212 Ga0501068_0170176 3300049584 Bacteria 1375
213 Ga0501069_0155415 3300049585 Bacteria 1316
214 Ga0501071_0052334 3300049587 Bacteria 2944
215 Ga0501072_0014698 3300049588 Bacteria 6002
216 Ga0501072_0033201 3300049588 Bacteria 4044
217 Ga0501072_0036794 3300049588 Bacteria 3838
218 Ga0501074_0274762 3300049590 Bacteria 1198
219 Ga0501074_0332715 3300049590 Bacteria 1078
220 Ga0501074_0504039 3300049590 Bacteria 857
221 Ga0501075_0070929 3300049591 Bacteria 2633
222 Ga0501076_0063597 3300049592 Bacteria 2940
223 Ga0501077_0196591 3300049593 Bacteria 1281
224 Ga0501079_0045414 3300049741 Bacteria 3390
225 Ga0501079_0427097 3300049741 Bacteria 1040
226 Ga0501035_0107998 3300049822 Bacteria 2440
227 Ga0501045_0028859 3300049824 Bacteria 4005
228 Ga0501045_0089425 3300049824 Bacteria 2275
229 Ga0501045_0109107 3300049824 Bacteria 2051
230 Ga0495601_0075158 3300053077 Bacteria 2163
231 Ga0495619_0029571 3300053085 Bacteria 3540
232 Ga0495619_0113261 3300053085 Bacteria 1855
233 Ga0501084_0052297 3300054114 Bacteria 3418
234 Ga0501084_0140425 3300054114 Bacteria 2034
235 Ga0587083_0017213 3300059505 Bacteria 1290
236 Ga0587091_019836 3300059511 Bacteria 1160
237 Ga0587078_007414 3300059646 Bacteria 1213
238 Ga0587079_019109 3300059647 Bacteria 1209
239 Ga0501082_0110356 3300060353 Bacteria 2381
240 Ga0466962_0014853 3300061719 Bacteria 3752
241 Ga0466962_0024828 3300061719 Bacteria 2878
242 Ga0466962_0031116 3300061719 Bacteria 2555
243 Ga0466962_0113092 3300061719 Bacteria 1308
244 Ga0530510_0042858 3300061734 Bacteria 3269
245 Ga0530510_0182145 3300061734 Bacteria 1558

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0410255 Ga0466967_0410255_334_1203 254
2 3300049590 Ga0501074_0504039 Ga0501074_0504039_15_788 255
3 3300041498 Ga0451841_0842985 Ga0451841_0842985_31_819 259
4 3300044684 Ga0466966_0131529 Ga0466966_0131529_228_1088 261
5 3300031995 Ga0307409_100435050 Ga0307409_1004350502 262
6 3300005329 Ga0070683_100161081 Ga0070683_1001610812 263
7 3300005455 Ga0070663_100123963 Ga0070663_1001239632 263
8 3300005564 Ga0070664_100026021 Ga0070664_1000260212 263
9 3300009098 Ga0105245_10295358 Ga0105245_102953582 263
10 3300010375 Ga0105239_10992901 Ga0105239_109929012 263
11 3300025901 Ga0207688_10038543 Ga0207688_100385432 263
12 3300025961 Ga0207712_10043380 Ga0207712_100433802 263
13 3300025961 Ga0207712_10467771 Ga0207712_104677712 263
14 3300026067 Ga0207678_10213375 Ga0207678_102133752 263
15 3300026075 Ga0207708_10006344 Ga0207708_100063444 263
16 3300044694 Ga0466963_0157037 Ga0466963_0157037_40_912 265
17 3300009148 Ga0105243_10271016 Ga0105243_102710163 266
18 3300010375 Ga0105239_10951538 Ga0105239_109515382 266
19 3300011119 Ga0105246_10625550 Ga0105246_106255502 266
20 3300013308 Ga0157375_10338098 Ga0157375_103380982 266
21 3300021388 Ga0213875_10011223 Ga0213875_100112233 266
22 3300026118 Ga0207675_100753174 Ga0207675_1007531742 266
23 3300037853 Ga0436364_0388370 Ga0436364_0388370_1335_2228 266
24 3300005435 Ga0070714_100008055 Ga0070714_1000080557 268
25 3300005436 Ga0070713_100108663 Ga0070713_1001086632 268
26 3300006028 Ga0070717_10101574 Ga0070717_101015742 268
27 3300025928 Ga0207700_10227136 Ga0207700_102271362 268
28 3300025929 Ga0207664_10001317 Ga0207664_1000131710 268
29 3300005981 Ga0081538_10136356 Ga0081538_101363562 270
30 3300021377 Ga0213874_10001046 Ga0213874_100010462 271
31 3300021384 Ga0213876_10020291 Ga0213876_100202912 271
32 3300021388 Ga0213875_10016430 Ga0213875_100164302 271
33 3300037853 Ga0436364_0825803 Ga0436364_0825803_2057_2935 271
34 3300039437 Ga0436365_1709683 Ga0436365_1709683_4703_5710 271
35 3300039450 Ga0436363_0019431 Ga0436363_0019431_10953_11960 271
36 3300045976 Ga0466967_0041430 Ga0466967_0041430_2681_3604 273
37 3300039450 Ga0436363_0347549 Ga0436363_0347549_613_1479 274
38 3300044842 Ga0466957_0058857 Ga0466957_0058857_196_1047 274
39 3300046463 Ga0495653_0162195 Ga0495653_0162195_280_1155 274
40 3300048903 Ga0496100_0400139 Ga0496100_0400139_160_1029 274
41 3300049584 Ga0501068_0170176 Ga0501068_0170176_230_1063 274
42 3300049590 Ga0501074_0332715 Ga0501074_0332715_173_1042 274
43 3300021384 Ga0213876_10027966 Ga0213876_100279663 275
44 3300041486 Ga0451807_2191608 Ga0451807_2191608_870_1700 275
45 3300044693 Ga0466961_0023041 Ga0466961_0023041_3063_3899 275
46 3300044694 Ga0466963_0003008 Ga0466963_0003008_4760_5596 275
47 3300044765 Ga0466970_0081589 Ga0466970_0081589_272_1108 275
48 3300044842 Ga0466957_0064745 Ga0466957_0064745_418_1308 275
49 3300044842 Ga0466957_0112163 Ga0466957_0112163_821_1657 275
50 3300045049 Ga0466959_0000609 Ga0466959_0000609_164_1000 275
51 3300045049 Ga0466959_0007165 Ga0466959_0007165_1759_2649 275
52 3300045836 Ga0466958_0004093 Ga0466958_0004093_6702_7538 275
53 3300061719 Ga0466962_0024828 Ga0466962_0024828_1371_2207 275
54 3300061719 Ga0466962_0113092 Ga0466962_0113092_396_1286 275
55 3300005459 Ga0068867_100163488 Ga0068867_1001634882 276
56 3300031995 Ga0307409_100097359 Ga0307409_1000973594 276
57 3300044693 Ga0466961_0045452 Ga0466961_0045452_367_1203 276
58 3300045049 Ga0466959_0198280 Ga0466959_0198280_286_1122 276
59 3300045836 Ga0466958_0077625 Ga0466958_0077625_453_1289 276
60 3300005329 Ga0070683_100250460 Ga0070683_1002504602 277
61 3300005334 Ga0068869_100404073 Ga0068869_1004040732 277
62 3300005344 Ga0070661_100498088 Ga0070661_1004980881 277
63 3300005356 Ga0070674_100135216 Ga0070674_1001352162 277
64 3300005457 Ga0070662_100090739 Ga0070662_1000907392 277
65 3300005535 Ga0070684_100050454 Ga0070684_1000504541 277
66 3300005535 Ga0070684_100189256 Ga0070684_1001892562 277
67 3300005614 Ga0068856_100135388 Ga0068856_1001353882 277
68 3300005981 Ga0081538_10008105 Ga0081538_1000810510 277
69 3300006844 Ga0075428_100403064 Ga0075428_1004030642 277
70 3300009094 Ga0111539_10065385 Ga0111539_100653856 277
71 3300009148 Ga0105243_10018056 Ga0105243_100180565 277
72 3300013105 Ga0157369_10165124 Ga0157369_101651244 277
73 3300013307 Ga0157372_10737600 Ga0157372_107376001 277
74 3300017792 Ga0163161_10203494 Ga0163161_102034942 277
75 3300025921 Ga0207652_10403713 Ga0207652_104037131 277
76 3300025933 Ga0207706_10092814 Ga0207706_100928142 277
77 3300025937 Ga0207669_10286077 Ga0207669_102860772 277
78 3300025944 Ga0207661_10529367 Ga0207661_105293671 277
79 3300026088 Ga0207641_10239002 Ga0207641_102390022 277
80 3300026116 Ga0207674_10115548 Ga0207674_101155481 277
81 3300031901 Ga0307406_10292260 Ga0307406_102922602 277
82 3300032126 Ga0307415_100057536 Ga0307415_1000575363 277
83 3300039437 Ga0436365_0936941 Ga0436365_0936941_190_1023 277
84 3300044694 Ga0466963_0091512 Ga0466963_0091512_336_1190 277
85 3300044694 Ga0466963_0127979 Ga0466963_0127979_55_909 277
86 3300044694 Ga0466963_0195687 Ga0466963_0195687_529_1383 277
87 3300044719 Ga0466971_0124373 Ga0466971_0124373_14_868 277
88 3300044842 Ga0466957_0086081 Ga0466957_0086081_599_1453 277
89 3300045836 Ga0466958_0024093 Ga0466958_0024093_546_1400 277
90 3300045976 Ga0466967_0008860 Ga0466967_0008860_5192_6055 277
91 3300045976 Ga0466967_0025134 Ga0466967_0025134_3642_4517 277
92 3300045976 Ga0466967_0090355 Ga0466967_0090355_1528_2415 277
93 3300045976 Ga0466967_0134132 Ga0466967_0134132_667_1521 277
94 3300048913 Ga0496110_0132891 Ga0496110_0132891_80_934 277
95 3300048915 Ga0496112_0191534 Ga0496112_0191534_1074_1928 277
96 3300048916 Ga0496113_0478931 Ga0496113_0478931_68_922 277
97 3300048924 Ga0496121_0167669 Ga0496121_0167669_509_1351 277
98 3300049568 Ga0501031_0089330 Ga0501031_0089330_1015_1854 277
99 3300049572 Ga0501036_0360404 Ga0501036_0360404_365_1204 277
100 3300049574 Ga0501038_0142719 Ga0501038_0142719_826_1671 277
101 3300049575 Ga0501039_0090942 Ga0501039_0090942_308_1147 277
102 3300049575 Ga0501039_0189085 Ga0501039_0189085_428_1267 277
103 3300049577 Ga0501041_0059056 Ga0501041_0059056_520_1365 277
104 3300049577 Ga0501041_0076425 Ga0501041_0076425_689_1528 277
105 3300049577 Ga0501041_0283361 Ga0501041_0283361_58_897 277
106 3300049578 Ga0501042_0138485 Ga0501042_0138485_117_956 277
107 3300049582 Ga0501048_0041416 Ga0501048_0041416_1840_2679 277
108 3300049582 Ga0501048_0060448 Ga0501048_0060448_523_1362 277
109 3300049585 Ga0501069_0155415 Ga0501069_0155415_266_1105 277
110 3300049587 Ga0501071_0052334 Ga0501071_0052334_590_1429 277
111 3300049588 Ga0501072_0014698 Ga0501072_0014698_2493_3338 277
112 3300049588 Ga0501072_0033201 Ga0501072_0033201_3036_3875 277
113 3300049588 Ga0501072_0036794 Ga0501072_0036794_674_1513 277
114 3300049590 Ga0501074_0274762 Ga0501074_0274762_180_1019 277
115 3300049591 Ga0501075_0070929 Ga0501075_0070929_1084_1923 277
116 3300049592 Ga0501076_0063597 Ga0501076_0063597_1435_2274 277
117 3300049593 Ga0501077_0196591 Ga0501077_0196591_246_1085 277
118 3300049741 Ga0501079_0045414 Ga0501079_0045414_1515_2354 277
119 3300049741 Ga0501079_0427097 Ga0501079_0427097_77_916 277
120 3300049822 Ga0501035_0107998 Ga0501035_0107998_898_1743 277
121 3300049824 Ga0501045_0028859 Ga0501045_0028859_129_968 277
122 3300049824 Ga0501045_0089425 Ga0501045_0089425_1341_2186 277
123 3300049824 Ga0501045_0109107 Ga0501045_0109107_35_886 277
124 3300054114 Ga0501084_0052297 Ga0501084_0052297_1087_1926 277
125 3300054114 Ga0501084_0140425 Ga0501084_0140425_1120_1959 277
126 3300060353 Ga0501082_0110356 Ga0501082_0110356_1414_2253 277
127 3300061719 Ga0466962_0031116 Ga0466962_0031116_1566_2420 277
128 3300061734 Ga0530510_0042858 Ga0530510_0042858_1671_2510 277
129 3300061734 Ga0530510_0182145 Ga0530510_0182145_133_972 277
130 3300005441 Ga0070700_100188777 Ga0070700_1001887773 278
131 3300005614 Ga0068856_100015803 Ga0068856_1000158036 278
132 3300005719 Ga0068861_100118036 Ga0068861_1001180363 278
133 3300005985 Ga0081539_10018170 Ga0081539_100181704 278
134 3300026078 Ga0207702_10020629 Ga0207702_100206292 278
135 3300032002 Ga0307416_100167934 Ga0307416_1001679342 278
136 3300032002 Ga0307416_100469135 Ga0307416_1004691352 278
137 3300037466 Ga0395898_0262980 Ga0395898_0262980_425_1261 278
138 3300038443 Ga0395901_0255544 Ga0395901_0255544_134_970 278
139 3300038443 Ga0395901_0259833 Ga0395901_0259833_902_1795 278
140 3300039453 Ga0436362_0176071 Ga0436362_0176071_153_1085 278
141 3300044656 Ga0466969_0013573 Ga0466969_0013573_2042_2881 278
142 3300044706 Ga0466964_0091515 Ga0466964_0091515_427_1296 278
143 3300044735 Ga0466968_0005843 Ga0466968_0005843_2784_3629 278
144 3300044735 Ga0466968_0055287 Ga0466968_0055287_112_957 278
145 3300045049 Ga0466959_0039375 Ga0466959_0039375_1585_2424 278
146 3300045049 Ga0466959_0094356 Ga0466959_0094356_213_1058 278
147 3300045836 Ga0466958_0289666 Ga0466958_0289666_140_1003 278
148 3300049571 Ga0501034_0243338 Ga0501034_0243338_55_909 278
149 3300005338 Ga0068868_100247732 Ga0068868_1002477323 279
150 3300021388 Ga0213875_10021867 Ga0213875_100218672 279
151 3300037853 Ga0436364_0250330 Ga0436364_0250330_3801_4775 279
152 3300037853 Ga0436364_1149474 Ga0436364_1149474_573_1445 279
153 3300039437 Ga0436365_0322180 Ga0436365_0322180_201_1055 279
154 3300044842 Ga0466957_0018838 Ga0466957_0018838_131_1003 279
155 3300045836 Ga0466958_0127504 Ga0466958_0127504_637_1497 279
156 3300045976 Ga0466967_0304064 Ga0466967_0304064_626_1486 279
157 3300006028 Ga0070717_10010578 Ga0070717_100105787 280
158 3300021384 Ga0213876_10020339 Ga0213876_100203394 280
159 3300037853 Ga0436364_0397395 Ga0436364_0397395_29038_30000 280
160 3300039437 Ga0436365_0743400 Ga0436365_0743400_2230_3114 280
161 3300039437 Ga0436365_1382979 Ga0436365_1382979_3227_4087 280
162 3300039437 Ga0436365_1715885 Ga0436365_1715885_2382_3257 280
163 3300039450 Ga0436363_0055446 Ga0436363_0055446_2203_3165 280
164 3300039453 Ga0436362_0606446 Ga0436362_0606446_922_1884 280
165 3300039453 Ga0436362_0722911 Ga0436362_0722911_87_956 280
166 3300048907 Ga0496104_0000026 Ga0496104_0000026_18462_19331 280
167 3300048913 Ga0496110_0001081 Ga0496110_0001081_1306_2175 280
168 3300048914 Ga0496111_0000006 Ga0496111_0000006_88313_89182 280
169 3300061719 Ga0466962_0014853 Ga0466962_0014853_107_961 280
170 3300005435 Ga0070714_100362271 Ga0070714_1003622712 281
171 3300005436 Ga0070713_100184639 Ga0070713_1001846392 281
172 3300021384 Ga0213876_10057592 Ga0213876_100575921 281
173 3300025928 Ga0207700_10143016 Ga0207700_101430162 281
174 3300031824 Ga0307413_10234474 Ga0307413_102344742 281
175 3300039437 Ga0436365_0598211 Ga0436365_0598211_358_1221 281
176 3300039437 Ga0436365_0768419 Ga0436365_0768419_5445_6320 281
177 3300044735 Ga0466968_0052789 Ga0466968_0052789_380_1270 281
178 3300045976 Ga0466967_0156134 Ga0466967_0156134_880_1770 281
179 3300005437 Ga0070710_10009809 Ga0070710_100098093 282
180 3300005439 Ga0070711_100234701 Ga0070711_1002347012 282
181 3300006175 Ga0070712_100012276 Ga0070712_1000122762 282
182 3300021377 Ga0213874_10036061 Ga0213874_100360613 282
183 3300021384 Ga0213876_10129997 Ga0213876_101299972 282
184 3300025898 Ga0207692_10003466 Ga0207692_100034663 282
185 3300025915 Ga0207693_10045084 Ga0207693_100450842 282
186 3300025929 Ga0207664_10410235 Ga0207664_104102352 282
187 3300035117 Ga0373953_0017112 Ga0373953_0017112_138_1016 282
188 3300035120 Ga0373957_0070201 Ga0373957_0070201_121_999 282
189 3300035410 Ga0373924_0055373 Ga0373924_0055373_389_1267 282
190 3300037853 Ga0436364_0649215 Ga0436364_0649215_279_1160 282
191 3300039437 Ga0436365_1792165 Ga0436365_1792165_968_1870 282
192 3300039450 Ga0436363_0747084 Ga0436363_0747084_1004_1906 282
193 3300039450 Ga0436363_0828025 Ga0436363_0828025_932_1834 282
194 3300044719 Ga0466971_0025923 Ga0466971_0025923_64_999 282
195 3300044842 Ga0466957_0001985 Ga0466957_0001985_6663_7598 282
196 3300045049 Ga0466959_0102375 Ga0466959_0102375_342_1241 282
197 3300045836 Ga0466958_0002243 Ga0466958_0002243_3492_4427 282
198 3300046454 Ga0495592_0020240 Ga0495592_0020240_476_1354 282
199 3300046463 Ga0495653_0053205 Ga0495653_0053205_2080_2958 282
200 3300046511 Ga0495608_0037038 Ga0495608_0037038_539_1417 282
201 3300046514 Ga0495618_0083334 Ga0495618_0083334_341_1219 282
202 3300046516 Ga0495628_0071769 Ga0495628_0071769_141_1019 282
203 3300046559 Ga0495667_0036822 Ga0495667_0036822_142_1020 282
204 3300047317 Ga0495604_0154429 Ga0495604_0154429_526_1404 282
205 3300048905 Ga0496102_0000027 Ga0496102_0000027_36872_37753 282
206 3300048906 Ga0496103_0000062 Ga0496103_0000062_25795_26676 282
207 3300048907 Ga0496104_0229086 Ga0496104_0229086_297_1175 282
208 3300048907 Ga0496104_0293835 Ga0496104_0293835_102_980 282
209 3300048913 Ga0496110_0170915 Ga0496110_0170915_488_1366 282
210 3300048916 Ga0496113_0196789 Ga0496113_0196789_492_1370 282
211 3300053077 Ga0495601_0075158 Ga0495601_0075158_246_1124 282
212 3300053085 Ga0495619_0029571 Ga0495619_0029571_1521_2399 282
213 3300059505 Ga0587083_0017213 Ga0587083_0017213_276_1151 282
214 3300059511 Ga0587091_019836 Ga0587091_019836_195_1070 282
215 3300059646 Ga0587078_007414 Ga0587078_007414_197_1072 282
216 3300059647 Ga0587079_019109 Ga0587079_019109_190_1065 282
217 3300009093 Ga0105240_10032414 Ga0105240_100324146 283
218 3300021388 Ga0213875_10002673 Ga0213875_100026739 283
219 3300025913 Ga0207695_10056861 Ga0207695_100568614 283
220 3300028563 Ga0265319_1000513 Ga0265319_100051317 283
221 3300037853 Ga0436364_0818586 Ga0436364_0818586_5412_6305 283
222 3300039450 Ga0436363_0271067 Ga0436363_0271067_2302_3249 283
223 3300045049 Ga0466959_0094606 Ga0466959_0094606_211_1110 283
224 3300053085 Ga0495619_0113261 Ga0495619_0113261_148_1017 283
225 3300005329 Ga0070683_100099134 Ga0070683_1000991342 284
226 3300005336 Ga0070680_100540044 Ga0070680_1005400441 284
227 3300005345 Ga0070692_10017597 Ga0070692_100175973 284
228 3300005353 Ga0070669_100103181 Ga0070669_1001031812 284
229 3300005435 Ga0070714_100079821 Ga0070714_1000798213 284
230 3300005437 Ga0070710_10000004 Ga0070710_1000000469 284
231 3300005440 Ga0070705_100030076 Ga0070705_1000300761 284
232 3300006028 Ga0070717_10000001 Ga0070717_1000000147 284
233 3300006175 Ga0070712_100000022 Ga0070712_1000000227 284
234 3300010375 Ga0105239_10087180 Ga0105239_100871802 284
235 3300011119 Ga0105246_10045170 Ga0105246_100451702 284
236 3300025898 Ga0207692_10000002 Ga0207692_10000002212 284
237 3300025913 Ga0207695_10030451 Ga0207695_100304514 284
238 3300025915 Ga0207693_10000165 Ga0207693_100001657 284
239 3300025923 Ga0207681_10005680 Ga0207681_100056807 284
240 3300025929 Ga0207664_10002416 Ga0207664_100024166 284
241 3300047317 Ga0495604_0000465 Ga0495604_0000465_18170_19066 284
242 3300048903 Ga0496100_0002038 Ga0496100_0002038_1658_2512 284
243 3300048904 Ga0496101_0025334 Ga0496101_0025334_1203_2057 284
244 3300048911 Ga0496108_0110268 Ga0496108_0110268_1370_2224 284
245 3300048915 Ga0496112_0018592 Ga0496112_0018592_612_1466 284

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06827

zf-FPG_IleRS

Zinc finger found in FPG and IleRS

244

273

0.97

PF06831

H2TH

Formamidopyrimidine-DNA glycosylase H2TH domain

132

224

0.97

PF01149

Fapy_DNA_glyco

Formamidopyrimidine-DNA glycosylase N-terminal domain

1

115

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1tdz-assembly1.cif.gz_A crystal structure complex between the lactococcus lactis fpg (mutm) and a fapy-dg containing dna 0.9348 3 273
4cis-assembly1.cif.gz_A structure of mutm in complex with carbocyclic 8-oxo-g containing dna 0.9328 2 273
1tdz-assembly1.cif.gz_A crystal structure complex between the lactococcus lactis fpg (mutm) and a fapy-dg containing dna 0.9314 3 273
6rno-assembly1.cif.gz_A crystal structure of a complex between the llfpg protein, a thf-dna and an inhibitor 0.9294 2 273
4cis-assembly1.cif.gz_A structure of mutm in complex with carbocyclic 8-oxo-g containing dna 0.9294 2 273
ID Description Score Start End Superfamily
3sarA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9512 132 271 1.10.8.50
1k82C02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9433 132 271 1.10.8.50
3sarA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9361 132 271 1.10.8.50
1kfvB02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9307 134 267 1.10.8.50
1k82C02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9296 132 271 1.10.8.50
ID Description Score Start End GO Terms
AF-A0A7W0MVR8-F1-model_v4 Formamidopyrimidine-DNA glycosylase 0.9568 1 174 GO:0003684
GO:0003906
GO:0006284
GO:0008270
GO:0016829
GO:0034039
AF-A0A7C5DQJ5-F1-model_v4 FPG-type domain-containing protein 0.9523 132 271 GO:0000703
GO:0003684
GO:0003906
GO:0006284
GO:0008270
AF-A0A353PBL0-F1-model_v4 DNA-formamidopyrimidine glycosylase 0.9519 132 271 GO:0003684
GO:0003906
GO:0006284
GO:0008270
GO:0034039
AF-A0A7W0ZFL7-F1-model_v4 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) 0.9467 1 274 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078
AF-A0A1V5K5W3-F1-model_v4 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.9465 132 271 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078

Feature Viewer

pLDDT pTM Quality
87.58 0.84 High
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Predicted Structure (AlphaFold2)

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