F357537

General Info

Members Datasets Scaffolds Average Seq Length
245 171 490 137

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0043148|Ga0395898_0043148_1725_2219
Length 164
Sequence LFDHYERLLQGERPGTEDMSESTTREDRFTHGLEVLRSVDGEAGQRVIDSLADISPELGHQIVAWGFGEIYARPGLEPRDRQLVTLGMLTALGGCEPQLEVHINAALNVGLTPEQIVEALLHSAGYCGFPKALNATFVAKKVFAERGLLPLGQQPADPDPATSA

Samples

Sample ID Description Type Environment
1 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
100 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
101 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
102 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
158 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
159 2643221647 Streptomyces sp. Root369 Isolate Unclassified
160 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
161 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
162 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
163 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
164 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
165 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
166 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
167 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
168 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
169 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
170 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
171 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.88
Metatranscriptomes 0.41
Isolates 5.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.53
Nodule 0
Rhizoplane 6.12
Rhizosphere 68.98
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395898_0043148 3300037466 Bacteria 4445
2 rootH1_10013042 3300003316 Bacteria 23843
3 rootH2_10122291 3300003320 Bacteria 3787
4 rootH2_10132928 3300003320 Bacteria 2669
5 rootH2_10194748 3300003320 Bacteria 1174
6 rootL2_10022440 3300003322 Bacteria 10728
7 rootL2_10190797 3300003322 Bacteria 1560
8 rootH1_10012656 3300003323 Bacteria 3037
9 rootH1_10091585 3300003323 Bacteria 2123
10 Ga0070658_10003224 3300005327 Bacteria 13474
11 Ga0070658_10032763 3300005327 Bacteria 4178
12 Ga0070683_100021043 3300005329 Bacteria 5817
13 Ga0070683_100055529 3300005329 Bacteria 3675
14 Ga0070680_100222257 3300005336 Bacteria 1594
15 Ga0070680_100897028 3300005336 Unclassified 765
16 Ga0070682_100008249 3300005337 Bacteria 5875
17 Ga0070682_100051529 3300005337 Bacteria 2573
18 Ga0068868_100162583 3300005338 Bacteria 1844
19 Ga0070660_100067741 3300005339 Bacteria 2782
20 Ga0070660_100573068 3300005339 Bacteria 943
21 Ga0070687_100015488 3300005343 Bacteria 3450
22 Ga0070661_100092818 3300005344 Bacteria 2237
23 Ga0070692_10030138 3300005345 Bacteria 2711
24 Ga0070675_100448190 3300005354 Bacteria 1157
25 Ga0070673_100789038 3300005364 Bacteria 876
26 Ga0070659_100020816 3300005366 Bacteria 4989
27 Ga0070659_100514541 3300005366 Bacteria 1021
28 Ga0070714_100073385 3300005435 Bacteria 2965
29 Ga0070694_100456818 3300005444 Bacteria 1009
30 Ga0070678_100043353 3300005456 Bacteria 3204
31 Ga0070678_100170000 3300005456 Bacteria 1774
32 Ga0070679_100201042 3300005530 Bacteria 1959
33 Ga0070684_100097848 3300005535 Bacteria 2617
34 Ga0070684_100657949 3300005535 Bacteria 975
35 Ga0070697_100130324 3300005536 Bacteria 2108
36 Ga0068853_100149025 3300005539 Bacteria 2105
37 Ga0068853_100163308 3300005539 Bacteria 2011
38 Ga0070665_100040341 3300005548 Bacteria 4693
39 Ga0070665_100438605 3300005548 Bacteria 1315
40 Ga0070665_100487944 3300005548 Bacteria 1243
41 Ga0068855_100170058 3300005563 Bacteria 2469
42 Ga0068855_101049304 3300005563 Bacteria 854
43 Ga0068855_101392472 3300005563 Bacteria 723
44 Ga0070664_100234645 3300005564 Bacteria 1645
45 Ga0068856_100155076 3300005614 Bacteria 2300
46 Ga0068856_101205430 3300005614 Bacteria 773
47 Ga0068856_101664952 3300005614 Bacteria 651
48 Ga0068852_100019328 3300005616 Bacteria 5389
49 Ga0068852_100181033 3300005616 Bacteria 1982
50 Ga0068864_100216066 3300005618 Bacteria 1767
51 Ga0068866_10258807 3300005718 Bacteria 1068
52 Ga0068858_100000018 3300005842 Bacteria 186799
53 Ga0068858_100090922 3300005842 Bacteria 2841
54 Ga0068860_100100535 3300005843 Bacteria 2759
55 Ga0081455_10247076 3300005937 Bacteria 1307
56 Ga0081455_10689581 3300005937 Bacteria 652
57 Ga0081538_10002522 3300005981 Bacteria 17833
58 Ga0081538_10003740 3300005981 Bacteria 14247
59 Ga0075363_100176685 3300006048 Bacteria 1214
60 Ga0075362_10010134 3300006177 Bacteria 3670
61 Ga0075370_10178116 3300006353 Bacteria 1251
62 Ga0068871_100988645 3300006358 Bacteria 783
63 Ga0068865_101678523 3300006881 Bacteria 572
64 Ga0075435_101656881 3300007076 Bacteria 561
65 Ga0105251_10014332 3300009011 Bacteria 4390
66 Ga0105244_10366048 3300009036 Bacteria 664
67 Ga0111539_10528834 3300009094 Bacteria 1374
68 Ga0105245_10008649 3300009098 Bacteria 8879
69 Ga0105247_10000049 3300009101 Bacteria 150328
70 Ga0105243_10226877 3300009148 Bacteria 1655
71 Ga0105241_10427523 3300009174 Bacteria 1167
72 Ga0105242_10029772 3300009176 Bacteria 4356
73 Ga0105248_10008734 3300009177 Bacteria 11132
74 Ga0105248_10138552 3300009177 Bacteria 2745
75 Ga0105237_10331955 3300009545 Bacteria 1525
76 Ga0105238_10160101 3300009551 Bacteria 2226
77 Ga0105238_10485502 3300009551 Bacteria 1235
78 Ga0105239_10183251 3300010375 Bacteria 2343
79 Ga0105246_10007024 3300011119 Bacteria 6891
80 Ga0105246_10581810 3300011119 Bacteria 964
81 Ga0157370_10776206 3300013104 Bacteria 872
82 Ga0157369_10080613 3300013105 Bacteria 3485
83 Ga0157369_10292079 3300013105 Bacteria 1697
84 Ga0157374_12245275 3300013296 Bacteria 573
85 Ga0163162_10008080 3300013306 Bacteria 10268
86 Ga0157372_10011533 3300013307 Bacteria 9401
87 Ga0157372_10354620 3300013307 Bacteria 1709
88 Ga0163163_10043575 3300014325 Bacteria 4400
89 Ga0163163_10055571 3300014325 Bacteria 3913
90 Ga0157377_10096347 3300014745 Bacteria 1755
91 Ga0157379_10053638 3300014968 Bacteria 3602
92 Ga0157379_10090443 3300014968 Bacteria 2746
93 Ga0183367_1010 3300015688 Bacteria 416164
94 Ga0163161_10316961 3300017792 Bacteria 1232
95 Ga0206356_11821853 3300020070 Bacteria 1934
96 Ga0209758_1004060 3300025297 Bacteria 12615
97 Ga0207426_1012268 3300025302 Bacteria 3225
98 Ga0207697_10184048 3300025315 Bacteria 916
99 Ga0207688_10067338 3300025901 Bacteria 2026
100 Ga0207647_10050406 3300025904 Bacteria 2577
101 Ga0207647_10249839 3300025904 Bacteria 1018
102 Ga0207705_10017637 3300025909 Bacteria 5109
103 Ga0207705_10099752 3300025909 Bacteria 2135
104 Ga0207660_10156178 3300025917 Bacteria 1756
105 Ga0207662_10057572 3300025918 Bacteria 2323
106 Ga0207657_10282078 3300025919 Bacteria 1319
107 Ga0207649_10229242 3300025920 Bacteria 1327
108 Ga0207652_10261475 3300025921 Bacteria 1561
109 Ga0207687_10049255 3300025927 Bacteria 2929
110 Ga0207690_10518201 3300025932 Bacteria 966
111 Ga0207686_10024918 3300025934 Bacteria 3473
112 Ga0207704_10246962 3300025938 Bacteria 1337
113 Ga0207711_10121499 3300025941 Bacteria 2332
114 Ga0207661_10001519 3300025944 Bacteria 15741
115 Ga0207661_10402479 3300025944 Bacteria 1241
116 Ga0207667_10103718 3300025949 Bacteria 2933
117 Ga0207667_10689332 3300025949 Bacteria 1025
118 Ga0207658_10373102 3300025986 Bacteria 1248
119 Ga0207658_11113503 3300025986 Bacteria 721
120 Ga0207677_10105692 3300026023 Bacteria 2084
121 Ga0207703_10000017 3300026035 Bacteria 282185
122 Ga0207703_10017402 3300026035 Bacteria 5611
123 Ga0207639_10223387 3300026041 Bacteria 1628
124 Ga0207639_10311700 3300026041 Bacteria 1394
125 Ga0207702_10041474 3300026078 Bacteria 3860
126 Ga0207676_10086636 3300026095 Bacteria 2559
127 Ga0207674_10195118 3300026116 Bacteria 1974
128 Ga0268266_10095015 3300028379 Bacteria 2618
129 Ga0268266_10278233 3300028379 Bacteria 1555
130 Ga0268266_10350054 3300028379 Bacteria 1388
131 Ga0268264_10090501 3300028381 Bacteria 2637
132 Ga0268264_11270825 3300028381 Bacteria 746
133 Ga0307511_10029048 3300030521 Bacteria 5003
134 Ga0265327_10001533 3300031251 Bacteria 28513
135 Ga0307513_10142901 3300031456 Bacteria 2316
136 Ga0307513_10276520 3300031456 Bacteria 1459
137 Ga0307508_10005317 3300031616 Bacteria 12273
138 Ga0307516_10503961 3300031730 Bacteria 865
139 Ga0307405_10480404 3300031731 Bacteria 992
140 Ga0307518_10135240 3300031838 Bacteria 1727
141 Ga0395898_0001847 3300037466 Bacteria 27221
142 Ga0451791_1473099 3300041451 Bacteria 671
143 Ga0451835_0900620 3300041492 Bacteria 1676
144 Ga0451843_0875547 3300041509 Bacteria 1064
145 Ga0466969_0000908 3300044656 Bacteria 16018
146 Ga0466969_0046890 3300044656 Bacteria 2141
147 Ga0466972_0044992 3300044658 Bacteria 2140
148 Ga0466965_0144156 3300044683 Bacteria 1242
149 Ga0466966_0021601 3300044684 Bacteria 4226
150 Ga0466966_0123886 3300044684 Bacteria 1586
151 Ga0466961_0046703 3300044693 Bacteria 2768
152 Ga0466961_0091796 3300044693 Bacteria 1917
153 Ga0466961_0118104 3300044693 Bacteria 1666
154 Ga0466964_0009586 3300044706 Bacteria 3649
155 Ga0466964_0714919 3300044706 Bacteria 559
156 Ga0466970_0039561 3300044765 Bacteria 2502
157 Ga0466970_0081847 3300044765 Bacteria 1746
158 Ga0466970_0146010 3300044765 Bacteria 1305
159 Ga0466960_0005939 3300044901 Bacteria 4869
160 Ga0466959_0005012 3300045049 Bacteria 8992
161 Ga0451576_0350421 3300045051 Bacteria 1546
162 Ga0466967_0115147 3300045976 Bacteria 2475
163 Ga0466967_0581535 3300045976 Bacteria 1104
164 Ga0495686_0189489 3300047472 Bacteria 1186
165 Ga0496101_1105362 3300048904 Bacteria 622
166 Ga0496102_0304011 3300048905 Bacteria 1503
167 Ga0496103_0113348 3300048906 Bacteria 1723
168 Ga0496105_0430279 3300048908 Bacteria 1044
169 Ga0496106_0850496 3300048909 Bacteria 722
170 Ga0496107_0404684 3300048910 Bacteria 1015
171 Ga0496108_0057400 3300048911 Bacteria 3271
172 Ga0496108_0480881 3300048911 Bacteria 1085
173 Ga0496109_0015150 3300048912 Bacteria 6712
174 Ga0496110_0031020 3300048913 Bacteria 4610
175 Ga0496111_0241140 3300048914 Bacteria 1343
176 Ga0496113_0251062 3300048916 Bacteria 1412
177 Ga0496113_0572435 3300048916 Bacteria 905
178 Ga0496114_0135957 3300048917 Bacteria 2126
179 Ga0496116_0027623 3300048919 Bacteria 4128
180 Ga0496117_0000232 3300048920 Bacteria 105479
181 Ga0496117_0295483 3300048920 Bacteria 860
182 Ga0496118_0004377 3300048921 Bacteria 16791
183 Ga0496119_0000528 3300048922 Bacteria 52027
184 Ga0496119_0001462 3300048922 Bacteria 28279
185 Ga0496119_0002718 3300048922 Bacteria 19095
186 Ga0496119_0003800 3300048922 Bacteria 15441
187 Ga0496120_0000120 3300048923 Bacteria 131625
188 Ga0496120_0001299 3300048923 Bacteria 31039
189 Ga0496120_0001843 3300048923 Bacteria 23608
190 Ga0496122_0000022 3300048925 Bacteria 388704
191 Ga0496122_0007401 3300048925 Bacteria 12224
192 Ga0496123_0000016 3300048926 Bacteria 424330
193 Ga0496123_0002350 3300048926 Bacteria 23731
194 Ga0496124_0004603 3300048927 Bacteria 15981
195 Ga0496124_0007610 3300048927 Bacteria 11480
196 Ga0496125_0003086 3300048928 Bacteria 20790
197 Ga0496125_0005466 3300048928 Bacteria 14111
198 Ga0496125_0042152 3300048928 Bacteria 3892
199 Ga0496126_0022729 3300048929 Bacteria 6091
200 Ga0496126_0031305 3300048929 Bacteria 5029
201 Ga0496126_0248874 3300048929 Bacteria 1482
202 Ga0501034_0009655 3300049571 Bacteria 10090
203 Ga0501036_0020239 3300049572 Bacteria 5588
204 Ga0501037_0010641 3300049573 Bacteria 6761
205 Ga0501038_0000962 3300049574 Bacteria 25777
206 Ga0501039_0147661 3300049575 Bacteria 1848
207 Ga0501042_0085847 3300049578 Bacteria 2257
208 Ga0501043_0224803 3300049579 Bacteria 1451
209 Ga0501047_0001743 3300049581 Bacteria 21088
210 Ga0501047_0369936 3300049581 Bacteria 1268
211 Ga0501048_0262825 3300049582 Bacteria 1226
212 Ga0501070_0819086 3300049586 Bacteria 730
213 Ga0501073_0061947 3300049589 Bacteria 2610
214 Ga0501035_0004628 3300049822 Bacteria 13048
215 Ga0501035_0321526 3300049822 Bacteria 1300
216 Ga0501044_0007130 3300049823 Bacteria 12296
217 Ga0501044_1341490 3300049823 Bacteria 581
218 nmdc:mga03n38_106989_c1 3300050490 Bacteria 1357
219 nmdc:mga03n38_1894_c1 3300050490 Bacteria 6259
220 nmdc:mga03n38_242572_c1 3300050490 Bacteria 949
221 nmdc:mga03n38_63588_c1 3300050490 Bacteria 1687
222 nmdc:mga00v17_516_c1 3300050491 Bacteria 21621
223 nmdc:mga0yw44_181_c1 3300050492 Bacteria 22141
224 nmdc:mga06z11_245629_c1 3300050494 Bacteria 1052
225 nmdc:mga06z11_92554_c2 3300050494 Bacteria 1121
226 nmdc:mga07m45_102756_c1 3300050496 Bacteria 1642
227 nmdc:mga07m45_678815_c1 3300050496 Bacteria 593
228 Ga0495595_0328735 3300053084 Bacteria 770
229 Ga0500644_0162676 3300053088 Bacteria 903
230 Ga0466962_0178846 3300061719 Bacteria 1034
231 Ga0466962_0623255 3300061719 Bacteria 551
232 2585321092 2582581314 Bacteria 11452267
233 2644268113 2643221647 Bacteria 10741251
234 2774391893 2773857762 Bacteria 5971770
235 2785367246 2784746768 Bacteria 10036182
236 2812352189 2811994878 Bacteria 5992952
237 2819747123 2818991472 Bacteria 10089953
238 2862289567 2862281513 Bacteria 9621493
239 2877683302 2877676314 Bacteria 9512378
240 2945941482 2945941187 Bacteria 4682474
241 2954388549 2954380949 Bacteria 10050426
242 2954699338 2954691527 Bacteria 10720516
243 2954702881 2954701450 Bacteria 10834262
244 8055070351 8055066027 Bacteria 9479577
245 8056835608 8056829672 Bacteria 9045328
246 Ga0395898_0043148
247 rootH1_10013042
248 rootH2_10122291
249 rootH2_10132928
250 rootH2_10194748
251 rootL2_10022440
252 rootL2_10190797
253 rootH1_10012656
254 rootH1_10091585
255 Ga0070658_10003224
256 Ga0070658_10032763
257 Ga0070683_100021043
258 Ga0070683_100055529
259 Ga0070680_100222257
260 Ga0070680_100897028
261 Ga0070682_100008249
262 Ga0070682_100051529
263 Ga0068868_100162583
264 Ga0070660_100067741
265 Ga0070660_100573068
266 Ga0070687_100015488
267 Ga0070661_100092818
268 Ga0070692_10030138
269 Ga0070675_100448190
270 Ga0070673_100789038
271 Ga0070659_100020816
272 Ga0070659_100514541
273 Ga0070714_100073385
274 Ga0070694_100456818
275 Ga0070678_100043353
276 Ga0070678_100170000
277 Ga0070679_100201042
278 Ga0070684_100097848
279 Ga0070684_100657949
280 Ga0070697_100130324
281 Ga0068853_100149025
282 Ga0068853_100163308
283 Ga0070665_100040341
284 Ga0070665_100438605
285 Ga0070665_100487944
286 Ga0068855_100170058
287 Ga0068855_101049304
288 Ga0068855_101392472
289 Ga0070664_100234645
290 Ga0068856_100155076
291 Ga0068856_101205430
292 Ga0068856_101664952
293 Ga0068852_100019328
294 Ga0068852_100181033
295 Ga0068864_100216066
296 Ga0068866_10258807
297 Ga0068858_100000018
298 Ga0068858_100090922
299 Ga0068860_100100535
300 Ga0081455_10247076
301 Ga0081455_10689581
302 Ga0081538_10002522
303 Ga0081538_10003740
304 Ga0075363_100176685
305 Ga0075362_10010134
306 Ga0075370_10178116
307 Ga0068871_100988645
308 Ga0068865_101678523
309 Ga0075435_101656881
310 Ga0105251_10014332
311 Ga0105244_10366048
312 Ga0111539_10528834
313 Ga0105245_10008649
314 Ga0105247_10000049
315 Ga0105243_10226877
316 Ga0105241_10427523
317 Ga0105242_10029772
318 Ga0105248_10008734
319 Ga0105248_10138552
320 Ga0105237_10331955
321 Ga0105238_10160101
322 Ga0105238_10485502
323 Ga0105239_10183251
324 Ga0105246_10007024
325 Ga0105246_10581810
326 Ga0157370_10776206
327 Ga0157369_10080613
328 Ga0157369_10292079
329 Ga0157374_12245275
330 Ga0163162_10008080
331 Ga0157372_10011533
332 Ga0157372_10354620
333 Ga0163163_10043575
334 Ga0163163_10055571
335 Ga0157377_10096347
336 Ga0157379_10053638
337 Ga0157379_10090443
338 Ga0183367_1010
339 Ga0163161_10316961
340 Ga0206356_11821853
341 Ga0209758_1004060
342 Ga0207426_1012268
343 Ga0207697_10184048
344 Ga0207688_10067338
345 Ga0207647_10050406
346 Ga0207647_10249839
347 Ga0207705_10017637
348 Ga0207705_10099752
349 Ga0207660_10156178
350 Ga0207662_10057572
351 Ga0207657_10282078
352 Ga0207649_10229242
353 Ga0207652_10261475
354 Ga0207687_10049255
355 Ga0207690_10518201
356 Ga0207686_10024918
357 Ga0207704_10246962
358 Ga0207711_10121499
359 Ga0207661_10001519
360 Ga0207661_10402479
361 Ga0207667_10103718
362 Ga0207667_10689332
363 Ga0207658_10373102
364 Ga0207658_11113503
365 Ga0207677_10105692
366 Ga0207703_10000017
367 Ga0207703_10017402
368 Ga0207639_10223387
369 Ga0207639_10311700
370 Ga0207702_10041474
371 Ga0207676_10086636
372 Ga0207674_10195118
373 Ga0268266_10095015
374 Ga0268266_10278233
375 Ga0268266_10350054
376 Ga0268264_10090501
377 Ga0268264_11270825
378 Ga0307511_10029048
379 Ga0265327_10001533
380 Ga0307513_10142901
381 Ga0307513_10276520
382 Ga0307508_10005317
383 Ga0307516_10503961
384 Ga0307405_10480404
385 Ga0307518_10135240
386 Ga0395898_0001847
387 Ga0451791_1473099
388 Ga0451835_0900620
389 Ga0451843_0875547
390 Ga0466969_0000908
391 Ga0466969_0046890
392 Ga0466972_0044992
393 Ga0466965_0144156
394 Ga0466966_0021601
395 Ga0466966_0123886
396 Ga0466961_0046703
397 Ga0466961_0091796
398 Ga0466961_0118104
399 Ga0466964_0009586
400 Ga0466964_0714919
401 Ga0466970_0039561
402 Ga0466970_0081847
403 Ga0466970_0146010
404 Ga0466960_0005939
405 Ga0466959_0005012
406 Ga0451576_0350421
407 Ga0466967_0115147
408 Ga0466967_0581535
409 Ga0495686_0189489
410 Ga0496101_1105362
411 Ga0496102_0304011
412 Ga0496103_0113348
413 Ga0496105_0430279
414 Ga0496106_0850496
415 Ga0496107_0404684
416 Ga0496108_0057400
417 Ga0496108_0480881
418 Ga0496109_0015150
419 Ga0496110_0031020
420 Ga0496111_0241140
421 Ga0496113_0251062
422 Ga0496113_0572435
423 Ga0496114_0135957
424 Ga0496116_0027623
425 Ga0496117_0000232
426 Ga0496117_0295483
427 Ga0496118_0004377
428 Ga0496119_0000528
429 Ga0496119_0001462
430 Ga0496119_0002718
431 Ga0496119_0003800
432 Ga0496120_0000120
433 Ga0496120_0001299
434 Ga0496120_0001843
435 Ga0496122_0000022
436 Ga0496122_0007401
437 Ga0496123_0000016
438 Ga0496123_0002350
439 Ga0496124_0004603
440 Ga0496124_0007610
441 Ga0496125_0003086
442 Ga0496125_0005466
443 Ga0496125_0042152
444 Ga0496126_0022729
445 Ga0496126_0031305
446 Ga0496126_0248874
447 Ga0501034_0009655
448 Ga0501036_0020239
449 Ga0501037_0010641
450 Ga0501038_0000962
451 Ga0501039_0147661
452 Ga0501042_0085847
453 Ga0501043_0224803
454 Ga0501047_0001743
455 Ga0501047_0369936
456 Ga0501048_0262825
457 Ga0501070_0819086
458 Ga0501073_0061947
459 Ga0501035_0004628
460 Ga0501035_0321526
461 Ga0501044_0007130
462 Ga0501044_1341490
463 nmdc:mga03n38_106989_c1
464 nmdc:mga03n38_1894_c1
465 nmdc:mga03n38_242572_c1
466 nmdc:mga03n38_63588_c1
467 nmdc:mga00v17_516_c1
468 nmdc:mga0yw44_181_c1
469 nmdc:mga06z11_245629_c1
470 nmdc:mga06z11_92554_c2
471 nmdc:mga07m45_102756_c1
472 nmdc:mga07m45_678815_c1
473 Ga0495595_0328735
474 Ga0500644_0162676
475 Ga0466962_0178846
476 Ga0466962_0623255
477 2585321092
478 2644268113
479 2774391893
480 2785367246
481 2812352189
482 2819747123
483 2862289567
484 2877683302
485 2945941482
486 2954388549
487 2954699338
488 2954702881
489 8055070351
490 8056835608

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02627

CMD

Carboxymuconolactone decarboxylase family

56

141

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2af7-assembly1.cif.gz_F crystal structure of the gamma-carboxymuconolactone decarboxylase from methanobacterium thermoautotrophicum. northeast structural genomics consortium target tt747. 0.9555 13 130
2af7-assembly1.cif.gz_A crystal structure of the gamma-carboxymuconolactone decarboxylase from methanobacterium thermoautotrophicum. northeast structural genomics consortium target tt747. 0.9494 12 128
2af7-assembly1.cif.gz_F crystal structure of the gamma-carboxymuconolactone decarboxylase from methanobacterium thermoautotrophicum. northeast structural genomics consortium target tt747. 0.9251 13 130
2af7-assembly1.cif.gz_A crystal structure of the gamma-carboxymuconolactone decarboxylase from methanobacterium thermoautotrophicum. northeast structural genomics consortium target tt747. 0.919 12 128
4g9q-assembly1.cif.gz_A crystal structure of a 4-carboxymuconolactone decarboxylase 0.9038 26 132
ID Description Score Start End Superfamily
2af7F00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9443 13 130 1.20.1290.10
2af7G00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9329 14 128 1.20.1290.10
2af7F00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.9134 13 130 1.20.1290.10
4g9qA00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8959 26 132 1.20.1290.10
2af7G00 Mainly Alpha;Up-down Bundle;AhpD-like;AhpD-like 0.8944 14 128 1.20.1290.10
ID Description Score Start End GO Terms
AF-A0A6I4MWI8-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9917 61 134 GO:0051920
AF-A0A2H6EZG8-F1-model_v4 Carboxymuconolactone decarboxylase family protein 0.9833 46 132 GO:0051920
AF-W5XWY1-F1-model_v4 Putative carboxymuconolactone decarboxylase 0.9782 44 130 GO:0051920
AF-A0A542NGY3-F1-model_v4 deleted 0.978 41 136
AF-N9EPF9-F1-model_v4 Carboxymuconolactone decarboxylase-like domain-containing protein 0.9755 13 132 GO:0051920

Map