F357523

General Info

Members Datasets Scaffolds Average Seq Length
245 139 490 189

Family's Representative Sequence

Representative Sequence 3300035691|Ga0373931_0618640|Ga0373931_0618640_46_627
Length 193
Sequence VTNEEVIKVYEDTGALLKGHFRLSSGRHSDRYLQSALVLQYPDQAERLCRALAEKVAPLKPQAVLSPAMGGLFVGHELARALKVRHIFTERNKETDAMELRRGFTVAKGEKIFAVEDIITTGKSVRESYEVVRGLGAEVVGVGCLLDRSGGTNPFDVPVKALASMKVESWDEKDCPLCKQGMPVVKPGSRSKF

Samples

Sample ID Description Type Environment
1 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
78 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
79 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
80 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
81 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
82 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
83 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
84 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
85 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
86 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
87 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
88 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
135 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
136 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
137 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.86
Nodule 0
Rhizoplane 4.49
Rhizosphere 92.65
Stem 0
Stem Tuber 0
Unclassified 13.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373931_0618640 3300035691 Unclassified 709
2 Ga0065712_10010243 3300005290 Bacteria 3035
3 Ga0070676_10265315 3300005328 Unclassified 1151
4 Ga0070683_100306039 3300005329 Bacteria 1512
5 Ga0070682_101039365 3300005337 Unclassified 682
6 Ga0070661_100355537 3300005344 Bacteria 1150
7 Ga0070671_100472351 3300005355 Unclassified 1077
8 Ga0070674_100017238 3300005356 Bacteria 4539
9 Ga0070659_101275816 3300005366 Bacteria 651
10 Ga0070713_100004300 3300005436 Bacteria 9545
11 Ga0070678_100532291 3300005456 Bacteria 1041
12 Ga0070662_100121290 3300005457 Bacteria 2004
13 Ga0070681_10988330 3300005458 Bacteria 761
14 Ga0070679_100347192 3300005530 Bacteria 1432
15 Ga0070664_100023279 3300005564 Bacteria 5116
16 Ga0070664_100214601 3300005564 Bacteria 1720
17 Ga0068857_100007454 3300005577 Bacteria 9415
18 Ga0068854_100215054 3300005578 Unclassified 1518
19 Ga0068852_101363267 3300005616 Bacteria 731
20 Ga0068859_101885587 3300005617 Unclassified 660
21 Ga0068866_10129934 3300005718 Unclassified 1431
22 Ga0070717_10308070 3300006028 Bacteria 1409
23 Ga0075364_10304185 3300006051 Bacteria 1086
24 Ga0075362_10022931 3300006177 Bacteria 2634
25 Ga0075362_10052461 3300006177 Bacteria 1828
26 Ga0075367_10007865 3300006178 Bacteria 5487
27 Ga0075366_10025682 3300006195 Bacteria 3444
28 Ga0075428_100000995 3300006844 Bacteria 29993
29 Ga0075428_100019146 3300006844 Bacteria 7572
30 Ga0075428_100025242 3300006844 Bacteria 6577
31 Ga0075428_100211625 3300006844 Unclassified 2095
32 Ga0075428_101588805 3300006844 Unclassified 684
33 Ga0075430_100003143 3300006846 Bacteria 13813
34 Ga0075430_100003168 3300006846 Bacteria 13771
35 Ga0075430_100194774 3300006846 Bacteria 1684
36 Ga0075431_100011342 3300006847 Bacteria 8979
37 Ga0075431_100014869 3300006847 Bacteria 7880
38 Ga0075431_100015000 3300006847 Bacteria 7844
39 Ga0075431_100065942 3300006847 Bacteria 3738
40 Ga0075431_100422151 3300006847 Bacteria 1333
41 Ga0075431_101120750 3300006847 Bacteria 751
42 Ga0075433_10008838 3300006852 Bacteria 8038
43 Ga0075434_100000141 3300006871 Bacteria 43904
44 Ga0075429_100001657 3300006880 Bacteria 18416
45 Ga0075429_100046262 3300006880 Bacteria 3787
46 Ga0075429_100180909 3300006880 Bacteria 1848
47 Ga0075429_100966787 3300006880 Unclassified 745
48 Ga0097620_100177388 3300006931 Bacteria 2213
49 Ga0097620_101885129 3300006931 Unclassified 660
50 Ga0105240_10330196 3300009093 Bacteria 1736
51 Ga0105240_10602573 3300009093 Bacteria 1209
52 Ga0111539_10000201 3300009094 Bacteria 70327
53 Ga0111539_10094520 3300009094 Bacteria 3512
54 Ga0111539_10389032 3300009094 Bacteria 1624
55 Ga0111539_10404965 3300009094 Bacteria 1589
56 Ga0114129_10000751 3300009147 Bacteria 41232
57 Ga0114129_10001134 3300009147 Bacteria 35181
58 Ga0114129_10026664 3300009147 Bacteria 8184
59 Ga0114129_10035177 3300009147 Bacteria 7077
60 Ga0114129_10079346 3300009147 Bacteria 4564
61 Ga0114129_10081856 3300009147 Bacteria 4487
62 Ga0105249_10814718 3300009553 Bacteria 998
63 Ga0157369_10952002 3300013105 Bacteria 880
64 Ga0157374_10450631 3300013296 Bacteria 1288
65 Ga0157372_10023551 3300013307 Bacteria 6677
66 Ga0157372_10806104 3300013307 Bacteria 1091
67 Ga0157380_10048831 3300014326 Bacteria 3335
68 Ga0157380_10381332 3300014326 Bacteria 1330
69 Ga0157377_10290385 3300014745 Bacteria 1075
70 Ga0207707_10372444 3300025912 Bacteria 1229
71 Ga0207707_10832973 3300025912 Bacteria 767
72 Ga0207695_10683448 3300025913 Bacteria 907
73 Ga0207649_10313815 3300025920 Bacteria 1150
74 Ga0207652_10552462 3300025921 Bacteria 1035
75 Ga0207700_10074998 3300025928 Unclassified 2619
76 Ga0207644_10660777 3300025931 Unclassified 870
77 Ga0207690_10143954 3300025932 Bacteria 1760
78 Ga0207706_10186110 3300025933 Bacteria 1823
79 Ga0207669_10092849 3300025937 Bacteria 1970
80 Ga0207669_10464931 3300025937 Bacteria 1005
81 Ga0207704_10406808 3300025938 Bacteria 1075
82 Ga0207691_10569104 3300025940 Bacteria 960
83 Ga0207679_10008136 3300025945 Bacteria 6671
84 Ga0207679_10193359 3300025945 Bacteria 1694
85 Ga0207651_10487025 3300025960 Unclassified 1064
86 Ga0207639_10199262 3300026041 Bacteria 1716
87 Ga0207674_10012051 3300026116 Bacteria 9684
88 Ga0207674_10418973 3300026116 Bacteria 1294
89 Ga0207675_100005607 3300026118 Bacteria 12023
90 Ga0207683_10476522 3300026121 Bacteria 1152
91 Ga0209971_1025091 3300027682 Unclassified 1424
92 Ga0209971_1063797 3300027682 Bacteria 892
93 Ga0207428_10000445 3300027907 Bacteria 50527
94 Ga0207428_10420540 3300027907 Bacteria 977
95 Ga0268266_10242604 3300028379 Bacteria 1664
96 Ga0268265_10433976 3300028380 Unclassified 1223
97 Ga0268265_11010508 3300028380 Bacteria 822
98 Ga0307408_100005759 3300031548 Bacteria 8254
99 Ga0307408_100017479 3300031548 Bacteria 4800
100 Ga0307408_100076116 3300031548 Unclassified 2495
101 Ga0307408_100105454 3300031548 Bacteria 2155
102 Ga0307405_10171283 3300031731 Bacteria 1549
103 Ga0307405_10217233 3300031731 Bacteria 1400
104 Ga0307405_10230241 3300031731 Bacteria 1366
105 Ga0307405_10261691 3300031731 Unclassified 1292
106 Ga0307413_10092328 3300031824 Bacteria 1975
107 Ga0307410_10024394 3300031852 Bacteria 3777
108 Ga0307406_10727071 3300031901 Bacteria 831
109 Ga0307409_100025059 3300031995 Bacteria 4175
110 Ga0307409_100129776 3300031995 Bacteria 2152
111 Ga0307416_100065320 3300032002 Bacteria 2990
112 Ga0307416_100076446 3300032002 Bacteria 2806
113 Ga0307416_100079441 3300032002 Bacteria 2764
114 Ga0307416_100119805 3300032002 Bacteria 2342
115 Ga0307416_100214543 3300032002 Bacteria 1839
116 Ga0307416_100280555 3300032002 Bacteria 1642
117 Ga0307411_10084009 3300032005 Bacteria 2201
118 Ga0307411_11110178 3300032005 Bacteria 713
119 Ga0307415_100059156 3300032126 Bacteria 2641
120 Ga0373944_0338693 3300035089 Unclassified 570
121 Ga0373933_0038087 3300035724 Bacteria 2825
122 Ga0373947_0779111 3300035725 Bacteria 653
123 Ga0373937_0000513 3300036401 Bacteria 35017
124 Ga0395900_0347731 3300037418 Bacteria 1457
125 Ga0439453_0013452 3300041408 Bacteria 1391
126 Ga0439431_0042128 3300041997 Bacteria 1166
127 Ga0439433_0040288 3300041999 Bacteria 1086
128 Ga0439443_008690 3300042003 Bacteria 1440
129 Ga0439450_001831 3300042008 Bacteria 3209
130 Ga0439462_0044815 3300042015 Bacteria 1184
131 Ga0450891_012766 3300042129 Bacteria 785
132 Ga0450898_090537 3300042134 Bacteria 631
133 Ga0450900_004887 3300042136 Bacteria 1562
134 Ga0439434_0178023 3300042435 Unclassified 711
135 Ga0439435_0003326 3300042436 Bacteria 3331
136 Ga0439435_0063902 3300042436 Bacteria 1077
137 Ga0439464_0006098 3300042439 Bacteria 3134
138 Ga0451577_0213552 3300042876 Bacteria 1743
139 Ga0495603_0030990 3300046455 Unclassified 3220
140 Ga0495629_0600725 3300046459 Unclassified 736
141 Ga0495656_0228819 3300046615 Unclassified 932
142 Ga0495674_0178564 3300047319 Unclassified 1769
143 Ga0496100_0115453 3300048903 Bacteria 1872
144 Ga0496102_0045261 3300048905 Bacteria 3995
145 Ga0496103_0172167 3300048906 Bacteria 1390
146 Ga0496104_0334657 3300048907 Bacteria 1427
147 Ga0496104_0361094 3300048907 Bacteria 1365
148 Ga0496106_0073611 3300048909 Unclassified 2614
149 Ga0496106_0182684 3300048909 Bacteria 1665
150 Ga0496112_0022345 3300048915 Bacteria 6028
151 Ga0496112_0028904 3300048915 Bacteria 5357
152 Ga0496112_0659214 3300048915 Bacteria 976
153 Ga0496114_0078504 3300048917 Unclassified 2785
154 Ga0501299_074227 3300049522 Bacteria 744
155 Ga0501032_0349112 3300049569 Bacteria 953
156 Ga0501036_0014562 3300049572 Bacteria 6549
157 Ga0501036_0107252 3300049572 Bacteria 2362
158 Ga0501036_0209546 3300049572 Unclassified 1638
159 Ga0501036_0362025 3300049572 Bacteria 1211
160 Ga0501036_0483808 3300049572 Bacteria 1030
161 Ga0501037_0430524 3300049573 Bacteria 902
162 Ga0501039_0365010 3300049575 Bacteria 1134
163 Ga0501040_0207446 3300049576 Bacteria 1392
164 Ga0501040_0276899 3300049576 Bacteria 1198
165 Ga0501041_0022982 3300049577 Bacteria 3737
166 Ga0501041_0293662 3300049577 Bacteria 1024
167 Ga0501041_0499927 3300049577 Bacteria 774
168 Ga0501041_0670282 3300049577 Bacteria 663
169 Ga0501042_0428026 3300049578 Bacteria 959
170 Ga0501042_0438198 3300049578 Bacteria 947
171 Ga0501042_0457473 3300049578 Bacteria 926
172 Ga0501046_0240904 3300049580 Unclassified 1334
173 Ga0501046_0408452 3300049580 Bacteria 980
174 Ga0501048_0155918 3300049582 Bacteria 1615
175 Ga0501067_0037281 3300049583 Bacteria 2701
176 Ga0501069_0600619 3300049585 Unclassified 660
177 Ga0501071_0023130 3300049587 Bacteria 4338
178 Ga0501071_0053000 3300049587 Bacteria 2925
179 Ga0501071_0432124 3300049587 Bacteria 1007
180 Ga0501071_0468244 3300049587 Bacteria 965
181 Ga0501072_0246128 3300049588 Bacteria 1424
182 Ga0501072_0296002 3300049588 Bacteria 1286
183 Ga0501072_0348414 3300049588 Bacteria 1176
184 Ga0501072_0779593 3300049588 Bacteria 749
185 Ga0501074_0069712 3300049590 Bacteria 2528
186 Ga0501075_0030563 3300049591 Bacteria 3991
187 Ga0501075_0066744 3300049591 Bacteria 2715
188 Ga0501075_0133109 3300049591 Bacteria 1894
189 Ga0501076_0018494 3300049592 Bacteria 5315
190 Ga0501076_0060409 3300049592 Bacteria 3016
191 Ga0501076_0204030 3300049592 Bacteria 1615
192 Ga0501076_0459694 3300049592 Unclassified 1048
193 Ga0501201_030343 3300049651 Unclassified 613
194 Ga0501079_0047073 3300049741 Bacteria 3328
195 Ga0501079_0388093 3300049741 Bacteria 1095
196 Ga0501079_0633203 3300049741 Bacteria 842
197 Ga0501079_0874953 3300049741 Bacteria 707
198 Ga0501080_0344598 3300049742 Bacteria 1346
199 Ga0501080_0483493 3300049742 Bacteria 1108
200 Ga0501080_1015024 3300049742 Bacteria 719
201 Ga0501081_0431784 3300049743 Bacteria 977
202 Ga0501081_0694644 3300049743 Bacteria 764
203 Ga0501083_0110934 3300049744 Bacteria 1804
204 Ga0501045_0011044 3300049824 Bacteria 6331
205 Ga0501045_0069908 3300049824 Bacteria 2582
206 Ga0501045_0156415 3300049824 Unclassified 1696
207 Ga0501045_0386141 3300049824 Bacteria 1042
208 nmdc:mga03683_46176_c1 3300050489 Bacteria 1805
209 nmdc:mga00v17_533115_c1 3300050491 Bacteria 760
210 nmdc:mga05p37_1089_c2 3300050507 Bacteria 22817
211 nmdc:mga05p37_311380_c1 3300050507 Bacteria 1866
212 nmdc:mga05p37_48699_c1 3300050507 Bacteria 5212
213 nmdc:mga05p37_634862_c1 3300050507 Bacteria 1199
214 nmdc:mga05p37_638_c1 3300050507 Bacteria 38795
215 nmdc:mga05p37_7289_c1 3300050507 Bacteria 13048
216 nmdc:mga09592_2104_c1 3300050508 Bacteria 16079
217 nmdc:mga09592_98413_c1 3300050508 Bacteria 2504
218 nmdc:mga0qj67_1418_c1 3300050509 Bacteria 16781
219 nmdc:mga0qj67_664772_c1 3300050509 Bacteria 831
220 nmdc:mga0qj67_69504_c1 3300050509 Bacteria 2809
221 nmdc:mga06r32_16179_c1 3300050510 Bacteria 6795
222 nmdc:mga06r32_313177_c1 3300050510 Bacteria 1555
223 nmdc:mga06r32_333959_c1 3300050510 Bacteria 1501
224 nmdc:mga06r32_422055_c1 3300050510 Bacteria 1315
225 nmdc:mga06r32_7742_c1 3300050510 Bacteria 9661
226 nmdc:mga08y16_150757_c1 3300050511 Bacteria 2417
227 nmdc:mga08y16_331967_c1 3300050511 Bacteria 1564
228 nmdc:mga08y16_360634_c1 3300050511 Bacteria 1492
229 nmdc:mga08y16_444431_c1 3300050511 Bacteria 1323
230 nmdc:mga08y16_4743_c1 3300050511 Bacteria 14177
231 nmdc:mga0n895_6198_c1 3300050512 Bacteria 10115
232 nmdc:mga0a205_132715_c1 3300050515 Bacteria 2391
233 nmdc:mga0a205_5817_c2 3300050515 Bacteria 10450
234 Ga0501084_0035846 3300054114 Bacteria 4147
235 Ga0501084_0194365 3300054114 Bacteria 1712
236 Ga0501084_0861207 3300054114 Bacteria 762
237 Ga0590071_001159 3300059421 Bacteria 7127
238 Ga0590071_028309 3300059421 Bacteria 1331
239 Ga0590074_008679 3300059423 Bacteria 1691
240 Ga0590075_006520 3300059424 Bacteria 2766
241 Ga0590075_063293 3300059424 Bacteria 954
242 Ga0590077_000251 3300059426 Bacteria 15342
243 Ga0501082_0188971 3300060353 Bacteria 1792
244 Ga0501082_0208317 3300060353 Bacteria 1701
245 Ga0530510_0445967 3300061734 Bacteria 978
246 Ga0373931_0618640
247 Ga0065712_10010243
248 Ga0070676_10265315
249 Ga0070683_100306039
250 Ga0070682_101039365
251 Ga0070661_100355537
252 Ga0070671_100472351
253 Ga0070674_100017238
254 Ga0070659_101275816
255 Ga0070713_100004300
256 Ga0070678_100532291
257 Ga0070662_100121290
258 Ga0070681_10988330
259 Ga0070679_100347192
260 Ga0070664_100023279
261 Ga0070664_100214601
262 Ga0068857_100007454
263 Ga0068854_100215054
264 Ga0068852_101363267
265 Ga0068859_101885587
266 Ga0068866_10129934
267 Ga0070717_10308070
268 Ga0075364_10304185
269 Ga0075362_10022931
270 Ga0075362_10052461
271 Ga0075367_10007865
272 Ga0075366_10025682
273 Ga0075428_100000995
274 Ga0075428_100019146
275 Ga0075428_100025242
276 Ga0075428_100211625
277 Ga0075428_101588805
278 Ga0075430_100003143
279 Ga0075430_100003168
280 Ga0075430_100194774
281 Ga0075431_100011342
282 Ga0075431_100014869
283 Ga0075431_100015000
284 Ga0075431_100065942
285 Ga0075431_100422151
286 Ga0075431_101120750
287 Ga0075433_10008838
288 Ga0075434_100000141
289 Ga0075429_100001657
290 Ga0075429_100046262
291 Ga0075429_100180909
292 Ga0075429_100966787
293 Ga0097620_100177388
294 Ga0097620_101885129
295 Ga0105240_10330196
296 Ga0105240_10602573
297 Ga0111539_10000201
298 Ga0111539_10094520
299 Ga0111539_10389032
300 Ga0111539_10404965
301 Ga0114129_10000751
302 Ga0114129_10001134
303 Ga0114129_10026664
304 Ga0114129_10035177
305 Ga0114129_10079346
306 Ga0114129_10081856
307 Ga0105249_10814718
308 Ga0157369_10952002
309 Ga0157374_10450631
310 Ga0157372_10023551
311 Ga0157372_10806104
312 Ga0157380_10048831
313 Ga0157380_10381332
314 Ga0157377_10290385
315 Ga0207707_10372444
316 Ga0207707_10832973
317 Ga0207695_10683448
318 Ga0207649_10313815
319 Ga0207652_10552462
320 Ga0207700_10074998
321 Ga0207644_10660777
322 Ga0207690_10143954
323 Ga0207706_10186110
324 Ga0207669_10092849
325 Ga0207669_10464931
326 Ga0207704_10406808
327 Ga0207691_10569104
328 Ga0207679_10008136
329 Ga0207679_10193359
330 Ga0207651_10487025
331 Ga0207639_10199262
332 Ga0207674_10012051
333 Ga0207674_10418973
334 Ga0207675_100005607
335 Ga0207683_10476522
336 Ga0209971_1025091
337 Ga0209971_1063797
338 Ga0207428_10000445
339 Ga0207428_10420540
340 Ga0268266_10242604
341 Ga0268265_10433976
342 Ga0268265_11010508
343 Ga0307408_100005759
344 Ga0307408_100017479
345 Ga0307408_100076116
346 Ga0307408_100105454
347 Ga0307405_10171283
348 Ga0307405_10217233
349 Ga0307405_10230241
350 Ga0307405_10261691
351 Ga0307413_10092328
352 Ga0307410_10024394
353 Ga0307406_10727071
354 Ga0307409_100025059
355 Ga0307409_100129776
356 Ga0307416_100065320
357 Ga0307416_100076446
358 Ga0307416_100079441
359 Ga0307416_100119805
360 Ga0307416_100214543
361 Ga0307416_100280555
362 Ga0307411_10084009
363 Ga0307411_11110178
364 Ga0307415_100059156
365 Ga0373944_0338693
366 Ga0373933_0038087
367 Ga0373947_0779111
368 Ga0373937_0000513
369 Ga0395900_0347731
370 Ga0439453_0013452
371 Ga0439431_0042128
372 Ga0439433_0040288
373 Ga0439443_008690
374 Ga0439450_001831
375 Ga0439462_0044815
376 Ga0450891_012766
377 Ga0450898_090537
378 Ga0450900_004887
379 Ga0439434_0178023
380 Ga0439435_0003326
381 Ga0439435_0063902
382 Ga0439464_0006098
383 Ga0451577_0213552
384 Ga0495603_0030990
385 Ga0495629_0600725
386 Ga0495656_0228819
387 Ga0495674_0178564
388 Ga0496100_0115453
389 Ga0496102_0045261
390 Ga0496103_0172167
391 Ga0496104_0334657
392 Ga0496104_0361094
393 Ga0496106_0073611
394 Ga0496106_0182684
395 Ga0496112_0022345
396 Ga0496112_0028904
397 Ga0496112_0659214
398 Ga0496114_0078504
399 Ga0501299_074227
400 Ga0501032_0349112
401 Ga0501036_0014562
402 Ga0501036_0107252
403 Ga0501036_0209546
404 Ga0501036_0362025
405 Ga0501036_0483808
406 Ga0501037_0430524
407 Ga0501039_0365010
408 Ga0501040_0207446
409 Ga0501040_0276899
410 Ga0501041_0022982
411 Ga0501041_0293662
412 Ga0501041_0499927
413 Ga0501041_0670282
414 Ga0501042_0428026
415 Ga0501042_0438198
416 Ga0501042_0457473
417 Ga0501046_0240904
418 Ga0501046_0408452
419 Ga0501048_0155918
420 Ga0501067_0037281
421 Ga0501069_0600619
422 Ga0501071_0023130
423 Ga0501071_0053000
424 Ga0501071_0432124
425 Ga0501071_0468244
426 Ga0501072_0246128
427 Ga0501072_0296002
428 Ga0501072_0348414
429 Ga0501072_0779593
430 Ga0501074_0069712
431 Ga0501075_0030563
432 Ga0501075_0066744
433 Ga0501075_0133109
434 Ga0501076_0018494
435 Ga0501076_0060409
436 Ga0501076_0204030
437 Ga0501076_0459694
438 Ga0501201_030343
439 Ga0501079_0047073
440 Ga0501079_0388093
441 Ga0501079_0633203
442 Ga0501079_0874953
443 Ga0501080_0344598
444 Ga0501080_0483493
445 Ga0501080_1015024
446 Ga0501081_0431784
447 Ga0501081_0694644
448 Ga0501083_0110934
449 Ga0501045_0011044
450 Ga0501045_0069908
451 Ga0501045_0156415
452 Ga0501045_0386141
453 nmdc:mga03683_46176_c1
454 nmdc:mga00v17_533115_c1
455 nmdc:mga05p37_1089_c2
456 nmdc:mga05p37_311380_c1
457 nmdc:mga05p37_48699_c1
458 nmdc:mga05p37_634862_c1
459 nmdc:mga05p37_638_c1
460 nmdc:mga05p37_7289_c1
461 nmdc:mga09592_2104_c1
462 nmdc:mga09592_98413_c1
463 nmdc:mga0qj67_1418_c1
464 nmdc:mga0qj67_664772_c1
465 nmdc:mga0qj67_69504_c1
466 nmdc:mga06r32_16179_c1
467 nmdc:mga06r32_313177_c1
468 nmdc:mga06r32_333959_c1
469 nmdc:mga06r32_422055_c1
470 nmdc:mga06r32_7742_c1
471 nmdc:mga08y16_150757_c1
472 nmdc:mga08y16_331967_c1
473 nmdc:mga08y16_360634_c1
474 nmdc:mga08y16_444431_c1
475 nmdc:mga08y16_4743_c1
476 nmdc:mga0n895_6198_c1
477 nmdc:mga0a205_132715_c1
478 nmdc:mga0a205_5817_c2
479 Ga0501084_0035846
480 Ga0501084_0194365
481 Ga0501084_0861207
482 Ga0590071_001159
483 Ga0590071_028309
484 Ga0590074_008679
485 Ga0590075_006520
486 Ga0590075_063293
487 Ga0590077_000251
488 Ga0501082_0188971
489 Ga0501082_0208317
490 Ga0530510_0445967

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00156

Pribosyltran

Phosphoribosyl transferase domain

38

175

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4paw-assembly1.cif.gz_A structure of hypothetical protein hp1257. 0.9024 6 182
4lza-assembly1.cif.gz_B crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.8649 31 163
4ohc-assembly1.cif.gz_D crystal structure of orotate phosphoribosyltransferase (oprtase) from burkholderia cenocepacia 0.8609 3 162
6w1i-assembly1.cif.gz_D re-interpretation of ppgpp (g4p) electron density in the deposited crystal structure of xanthine phosphoribosyltransferase (xprt) (1y0b). 0.8537 42 165
2aee-assembly1.cif.gz_A crystal structure of orotate phosphoribosyltransferase from streptococcus pyogenes 0.8505 1 162
ID Description Score Start End Superfamily
4pawB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9126 6 182 3.40.50.2020
af_Q59040_42_210_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8704 43 163 3.40.50.2020
af_Q4DBC5_255_457_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8629 5 163 3.40.50.2020
4pawB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8495 6 182 3.40.50.2020
1y0bB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8469 47 165 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A2V9PQC8-F1-model_v4 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9803 5 145 GO:0004588
GO:0019856
GO:0044205
AF-A0A838U9J1-F1-model_v4 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9767 6 128 GO:0004588
GO:0016020
GO:0019856
GO:0044205
AF-A0A430RY41-F1-model_v4 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9739 6 138 GO:0004588
GO:0019856
GO:0044205
AF-A0A7W1DTK7-F1-model_v4 Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC 2.4.2.10) 0.9726 6 188 GO:0000287
GO:0004588
GO:0019856
GO:0044205
AF-A0A1G1GAB1-F1-model_v4 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.9721 8 132 GO:0004588
GO:0019856
GO:0044205

Map