F357302

General Info

Members Datasets Scaffolds Average Seq Length
245 156 490 217

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10039795|Ga0114129_100397951
Length 248
Sequence MSNTKGSDDGGAGVTMIGPGVTRWATTTAPPRSHGRVYPTKPAGSSSNEPSDLEPTPSPDADRREEFEALIRRQLELLGEDPDRDGLQKTPARVVKALAWLTRGHAVDVRAVIGDAVFEETHESMVMVRDIELYSLCEHHMLPFFGRAHIAYIPDGRIVGLSKLPRIVEAFARRLQVQERLTEQVAQAIEDVLLPRGVGVVIEAAHLCMMMRGVEKQNSKTITSALRGQFRDCPMTRDEFLRLAYRAA

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
94 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
95 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
142 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 1.63
Rhizosphere 96.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10039795 3300009147 Bacteria 6631
2 Ga0065712_10179076 3300005290 Bacteria 1202
3 Ga0070658_10006425 3300005327 Bacteria 9529
4 Ga0070658_10075120 3300005327 Bacteria 2772
5 Ga0070683_100017024 3300005329 Bacteria 6416
6 Ga0070683_100020466 3300005329 Bacteria 5889
7 Ga0070683_100066869 3300005329 Bacteria 3347
8 Ga0070683_100270232 3300005329 Bacteria 1617
9 Ga0070670_100008974 3300005331 Bacteria 8539
10 Ga0070680_100278145 3300005336 Bacteria 1418
11 Ga0070660_100004275 3300005339 Bacteria 9864
12 Ga0070660_100217046 3300005339 Bacteria 1554
13 Ga0070689_100119261 3300005340 Bacteria 2106
14 Ga0070691_10013848 3300005341 Bacteria 3701
15 Ga0070661_100056816 3300005344 Bacteria 2867
16 Ga0070661_100070006 3300005344 Bacteria 2580
17 Ga0070669_100515748 3300005353 Bacteria 993
18 Ga0070671_100581449 3300005355 Bacteria 967
19 Ga0070659_100046277 3300005366 Bacteria 3410
20 Ga0070659_100109174 3300005366 Bacteria 2233
21 Ga0070659_100566268 3300005366 Bacteria 974
22 Ga0070709_10000134 3300005434 Bacteria 49319
23 Ga0070713_100001791 3300005436 Bacteria 13842
24 Ga0070713_100461823 3300005436 Bacteria 1194
25 Ga0070711_100226841 3300005439 Bacteria 1455
26 Ga0070663_100011390 3300005455 Bacteria 5581
27 Ga0070662_100009614 3300005457 Bacteria 6326
28 Ga0070681_10021374 3300005458 Bacteria 6489
29 Ga0070681_10102714 3300005458 Bacteria 2804
30 Ga0070681_11004443 3300005458 Bacteria 754
31 Ga0070685_10001927 3300005466 Bacteria 10774
32 Ga0070685_10026486 3300005466 Bacteria 3196
33 Ga0070685_10042698 3300005466 Bacteria 2588
34 Ga0070698_100113690 3300005471 Bacteria 2672
35 Ga0070699_100035591 3300005518 Bacteria 4304
36 Ga0070679_100022139 3300005530 Bacteria 6209
37 Ga0070679_100036480 3300005530 Bacteria 4878
38 Ga0070679_100168791 3300005530 Bacteria 2161
39 Ga0070679_100226820 3300005530 Bacteria 1828
40 Ga0070684_100007944 3300005535 Bacteria 8280
41 Ga0070684_100051883 3300005535 Bacteria 3564
42 Ga0070684_100898038 3300005535 Bacteria 830
43 Ga0068853_100163498 3300005539 Bacteria 2010
44 Ga0070672_100293063 3300005543 Bacteria 1378
45 Ga0070686_100000066 3300005544 Bacteria 79941
46 Ga0068855_100011704 3300005563 Bacteria 10603
47 Ga0068855_100338348 3300005563 Bacteria 1660
48 Ga0068855_100361653 3300005563 Bacteria 1597
49 Ga0068855_100546313 3300005563 Bacteria 1254
50 Ga0068855_100606349 3300005563 Bacteria 1180
51 Ga0068855_100625344 3300005563 Bacteria 1159
52 Ga0070664_100018331 3300005564 Bacteria 5748
53 Ga0070664_100047935 3300005564 Bacteria 3611
54 Ga0070664_100482542 3300005564 Bacteria 1141
55 Ga0068857_100002212 3300005577 Bacteria 15833
56 Ga0068857_100496673 3300005577 Bacteria 1145
57 Ga0068854_100024663 3300005578 Bacteria 4120
58 Ga0068856_100064654 3300005614 Bacteria 3615
59 Ga0068856_100796296 3300005614 Bacteria 965
60 Ga0068852_100326336 3300005616 Bacteria 1492
61 Ga0068851_10015381 3300005834 Bacteria 3645
62 Ga0068858_100063413 3300005842 Bacteria 3420
63 Ga0081455_10091128 3300005937 Bacteria 2469
64 Ga0070716_100158697 3300006173 Bacteria 1463
65 Ga0075428_100128489 3300006844 Bacteria 2757
66 Ga0075430_100034046 3300006846 Bacteria 4323
67 Ga0075430_100056362 3300006846 Bacteria 3304
68 Ga0075430_100192894 3300006846 Bacteria 1693
69 Ga0075431_100045582 3300006847 Bacteria 4521
70 Ga0075431_100094075 3300006847 Bacteria 3093
71 Ga0075431_100185468 3300006847 Bacteria 2133
72 Ga0075431_100210711 3300006847 Bacteria 1985
73 Ga0075433_10040057 3300006852 Bacteria 4053
74 Ga0075434_100118079 3300006871 Bacteria 2666
75 Ga0075429_100044229 3300006880 Bacteria 3874
76 Ga0075429_100092178 3300006880 Bacteria 2643
77 Ga0075436_100120583 3300006914 Bacteria 1835
78 Ga0105240_10023278 3300009093 Bacteria 8197
79 Ga0105240_10128016 3300009093 Bacteria 3049
80 Ga0105240_10410322 3300009093 Bacteria 1524
81 Ga0111539_10031482 3300009094 Bacteria 6442
82 Ga0114129_10195841 3300009147 Bacteria 2740
83 Ga0114129_10211755 3300009147 Bacteria 2620
84 Ga0105248_10338270 3300009177 Bacteria 1695
85 Ga0105238_10086821 3300009551 Bacteria 3116
86 Ga0105249_10278345 3300009553 Bacteria 1670
87 Ga0105246_10114976 3300011119 Bacteria 1984
88 Ga0157371_10017296 3300013102 Bacteria 5361
89 Ga0157370_10066801 3300013104 Bacteria 3400
90 Ga0157370_10090297 3300013104 Bacteria 2877
91 Ga0157369_10023208 3300013105 Bacteria 6911
92 Ga0157369_10026218 3300013105 Bacteria 6468
93 Ga0157369_10090865 3300013105 Bacteria 3260
94 Ga0157369_10338764 3300013105 Bacteria 1562
95 Ga0157369_10820698 3300013105 Bacteria 955
96 Ga0157374_10417137 3300013296 Bacteria 1341
97 Ga0157372_10026303 3300013307 Bacteria 6331
98 Ga0157372_10037373 3300013307 Bacteria 5356
99 Ga0157372_10053667 3300013307 Bacteria 4493
100 Ga0157372_10070234 3300013307 Bacteria 3940
101 Ga0157372_10244689 3300013307 Bacteria 2081
102 Ga0157372_10313595 3300013307 Bacteria 1826
103 Ga0157372_11008841 3300013307 Bacteria 964
104 Ga0157375_10613284 3300013308 Bacteria 1247
105 Ga0163163_10122218 3300014325 Bacteria 2638
106 Ga0157379_11248370 3300014968 Bacteria 716
107 Ga0182007_10211749 3300015262 Bacteria 681
108 Ga0207699_10000045 3300025906 Bacteria 112158
109 Ga0207705_10006267 3300025909 Bacteria 8834
110 Ga0207705_10007008 3300025909 Bacteria 8318
111 Ga0207705_10016201 3300025909 Bacteria 5346
112 Ga0207705_10053851 3300025909 Bacteria 2900
113 Ga0207707_10013263 3300025912 Bacteria 7181
114 Ga0207695_10013174 3300025913 Bacteria 9867
115 Ga0207695_10452187 3300025913 Bacteria 1167
116 Ga0207660_10140330 3300025917 Bacteria 1847
117 Ga0207660_10160124 3300025917 Bacteria 1736
118 Ga0207657_10003242 3300025919 Bacteria 17421
119 Ga0207657_10046929 3300025919 Bacteria 3781
120 Ga0207649_10063437 3300025920 Bacteria 2332
121 Ga0207652_10109165 3300025921 Bacteria 2452
122 Ga0207646_10018397 3300025922 Bacteria 6518
123 Ga0207694_10000017 3300025924 Bacteria 342100
124 Ga0207650_10318626 3300025925 Bacteria 1273
125 Ga0207700_10001388 3300025928 Bacteria 13760
126 Ga0207690_10049734 3300025932 Bacteria 2796
127 Ga0207690_10087914 3300025932 Bacteria 2188
128 Ga0207706_10013932 3300025933 Bacteria 7291
129 Ga0207711_10298153 3300025941 Bacteria 1486
130 Ga0207661_10015830 3300025944 Bacteria 5555
131 Ga0207661_10092982 3300025944 Bacteria 2515
132 Ga0207661_10264459 3300025944 Bacteria 1533
133 Ga0207679_10041122 3300025945 Bacteria 3313
134 Ga0207679_10446393 3300025945 Bacteria 1146
135 Ga0207679_10870822 3300025945 Bacteria 823
136 Ga0207667_10193360 3300025949 Bacteria 2087
137 Ga0207667_10347403 3300025949 Bacteria 1513
138 Ga0207667_10479673 3300025949 Bacteria 1263
139 Ga0207667_10602816 3300025949 Bacteria 1107
140 Ga0207703_10377236 3300026035 Bacteria 1311
141 Ga0207678_10001075 3300026067 Bacteria 25020
142 Ga0207702_10025772 3300026078 Bacteria 4882
143 Ga0207702_10616989 3300026078 Bacteria 1065
144 Ga0207674_10004918 3300026116 Bacteria 15976
145 Ga0207674_10143268 3300026116 Bacteria 2349
146 Ga0207674_10933892 3300026116 Bacteria 836
147 Ga0307408_100018927 3300031548 Bacteria 4630
148 Ga0307408_100066512 3300031548 Bacteria 2647
149 Ga0307413_10134290 3300031824 Bacteria 1699
150 Ga0307410_10001274 3300031852 Bacteria 11207
151 Ga0307406_10026152 3300031901 Bacteria 3501
152 Ga0307406_10317146 3300031901 Bacteria 1204
153 Ga0307406_10490479 3300031901 Bacteria 994
154 Ga0307407_10003541 3300031903 Bacteria 6437
155 Ga0307407_10380903 3300031903 Bacteria 1007
156 Ga0307412_10523730 3300031911 Bacteria 991
157 Ga0307409_100286137 3300031995 Bacteria 1526
158 Ga0307409_100522297 3300031995 Bacteria 1160
159 Ga0307416_100003508 3300032002 Bacteria 9229
160 Ga0307416_100363422 3300032002 Bacteria 1470
161 Ga0307414_10016836 3300032004 Bacteria 4458
162 Ga0307411_10041752 3300032005 Bacteria 2922
163 Ga0307411_10087650 3300032005 Bacteria 2162
164 Ga0307415_100004534 3300032126 Bacteria 7230
165 Ga0373959_0000354 3300034820 Bacteria 9233
166 Ga0373926_0097674 3300035083 Bacteria 1096
167 Ga0373931_0165061 3300035691 Bacteria 1301
168 Ga0373935_0277128 3300035692 Bacteria 1180
169 Ga0373927_0062821 3300035695 Bacteria 2402
170 Ga0373925_0135648 3300037068 Bacteria 1923
171 Ga0395899_0008866 3300037312 Bacteria 7744
172 Ga0395899_0010696 3300037312 Bacteria 7033
173 Ga0395900_0015385 3300037418 Bacteria 7797
174 Ga0395900_0264870 3300037418 Bacteria 1715
175 Ga0395898_0101359 3300037466 Bacteria 2765
176 Ga0395905_0020629 3300037471 Bacteria 6239
177 Ga0395905_0141778 3300037471 Bacteria 2260
178 Ga0436364_1189400 3300037853 Bacteria 1127
179 Ga0395901_0019119 3300038443 Bacteria 7005
180 Ga0395901_0027589 3300038443 Bacteria 5835
181 Ga0436363_1475183 3300039450 Bacteria 2430
182 Ga0436363_1574291 3300039450 Bacteria 6625
183 Ga0466965_0044560 3300044683 Bacteria 2193
184 Ga0466961_0043175 3300044693 Bacteria 2888
185 Ga0451576_0099017 3300045051 Bacteria 3033
186 Ga0451576_0663168 3300045051 Bacteria 1096
187 Ga0466958_0157164 3300045836 Bacteria 1435
188 Ga0495592_0111484 3300046454 Bacteria 1936
189 Ga0495651_0030459 3300046462 Bacteria 4208
190 Ga0495594_0016167 3300046499 Bacteria 3929
191 Ga0495618_0053614 3300046514 Bacteria 2550
192 Ga0495630_0322911 3300046517 Bacteria 1180
193 Ga0495652_0231096 3300046529 Bacteria 1383
194 Ga0495665_0005102 3300046531 Bacteria 7083
195 Ga0495640_0030425 3300046533 Bacteria 3866
196 Ga0495586_0093398 3300046535 Bacteria 1664
197 Ga0495587_0038651 3300046536 Bacteria 2860
198 Ga0495645_0002523 3300046543 Bacteria 12427
199 Ga0495667_0038126 3300046559 Bacteria 3201
200 Ga0495599_0043122 3300046678 Bacteria 2831
201 Ga0495623_0048289 3300046679 Bacteria 2700
202 Ga0495600_0165212 3300046809 Bacteria 1430
203 Ga0495674_0089924 3300047319 Bacteria 2624
204 Ga0495675_0048560 3300047444 Bacteria 2700
205 Ga0495684_0008811 3300047471 Bacteria 7798
206 Ga0496104_0042218 3300048907 Bacteria 4279
207 Ga0496110_0957126 3300048913 Bacteria 763
208 Ga0496112_0023140 3300048915 Bacteria 5931
209 Ga0496112_0611079 3300048915 Bacteria 1022
210 Ga0501296_016614 3300049519 Bacteria 916
211 Ga0501033_0064900 3300049570 Bacteria 2686
212 Ga0501037_0048210 3300049573 Bacteria 3122
213 Ga0501038_0162922 3300049574 Bacteria 1811
214 Ga0501039_0607663 3300049575 Bacteria 857
215 Ga0501040_0278665 3300049576 Bacteria 1194
216 Ga0501042_0117151 3300049578 Bacteria 1918
217 Ga0501048_0013534 3300049582 Bacteria 6052
218 Ga0501070_0653936 3300049586 Bacteria 834
219 Ga0501076_0048928 3300049592 Bacteria 3342
220 Ga0501076_0354243 3300049592 Bacteria 1205
221 Ga0501249_048526 3300049679 Bacteria 972
222 Ga0501229_017958 3300049706 Bacteria 925
223 Ga0501079_0107062 3300049741 Bacteria 2170
224 Ga0501035_0001606 3300049822 Bacteria 22856
225 Ga0501035_0193046 3300049822 Bacteria 1750
226 Ga0501035_0219542 3300049822 Bacteria 1624
227 Ga0501044_0123771 3300049823 Bacteria 2584
228 Ga0501045_0023629 3300049824 Bacteria 4409
229 nmdc:mga05p37_229062_c1 3300050507 Bacteria 2240
230 nmdc:mga05p37_29816_c1 3300050507 Bacteria 6657
231 nmdc:mga05p37_72611_c1 3300050507 Bacteria 2016
232 nmdc:mga09592_41792_c1 3300050508 Bacteria 3856
233 nmdc:mga09592_46982_c1 3300050508 Bacteria 3637
234 nmdc:mga0qj67_11377_c1 3300050509 Bacteria 6667
235 nmdc:mga0qj67_22152_c1 3300050509 Bacteria 4878
236 nmdc:mga0qj67_322589_c1 3300050509 Bacteria 1250
237 nmdc:mga06r32_14777_c1 3300050510 Bacteria 7084
238 nmdc:mga06r32_65210_c1 3300050510 Bacteria 3512
239 nmdc:mga06r32_91017_c1 3300050510 Bacteria 2981
240 nmdc:mga0n895_87157_c1 3300050512 Bacteria 3119
241 nmdc:mga0a205_48494_c1 3300050515 Bacteria 4098
242 Ga0500628_009407 3300053129 Bacteria 1722
243 Ga0501084_0694467 3300054114 Bacteria 858
244 Ga0501082_0134278 3300060353 Bacteria 2147
245 Ga0530510_0174255 3300061734 Bacteria 1594
246 Ga0114129_10039795
247 Ga0065712_10179076
248 Ga0070658_10006425
249 Ga0070658_10075120
250 Ga0070683_100017024
251 Ga0070683_100020466
252 Ga0070683_100066869
253 Ga0070683_100270232
254 Ga0070670_100008974
255 Ga0070680_100278145
256 Ga0070660_100004275
257 Ga0070660_100217046
258 Ga0070689_100119261
259 Ga0070691_10013848
260 Ga0070661_100056816
261 Ga0070661_100070006
262 Ga0070669_100515748
263 Ga0070671_100581449
264 Ga0070659_100046277
265 Ga0070659_100109174
266 Ga0070659_100566268
267 Ga0070709_10000134
268 Ga0070713_100001791
269 Ga0070713_100461823
270 Ga0070711_100226841
271 Ga0070663_100011390
272 Ga0070662_100009614
273 Ga0070681_10021374
274 Ga0070681_10102714
275 Ga0070681_11004443
276 Ga0070685_10001927
277 Ga0070685_10026486
278 Ga0070685_10042698
279 Ga0070698_100113690
280 Ga0070699_100035591
281 Ga0070679_100022139
282 Ga0070679_100036480
283 Ga0070679_100168791
284 Ga0070679_100226820
285 Ga0070684_100007944
286 Ga0070684_100051883
287 Ga0070684_100898038
288 Ga0068853_100163498
289 Ga0070672_100293063
290 Ga0070686_100000066
291 Ga0068855_100011704
292 Ga0068855_100338348
293 Ga0068855_100361653
294 Ga0068855_100546313
295 Ga0068855_100606349
296 Ga0068855_100625344
297 Ga0070664_100018331
298 Ga0070664_100047935
299 Ga0070664_100482542
300 Ga0068857_100002212
301 Ga0068857_100496673
302 Ga0068854_100024663
303 Ga0068856_100064654
304 Ga0068856_100796296
305 Ga0068852_100326336
306 Ga0068851_10015381
307 Ga0068858_100063413
308 Ga0081455_10091128
309 Ga0070716_100158697
310 Ga0075428_100128489
311 Ga0075430_100034046
312 Ga0075430_100056362
313 Ga0075430_100192894
314 Ga0075431_100045582
315 Ga0075431_100094075
316 Ga0075431_100185468
317 Ga0075431_100210711
318 Ga0075433_10040057
319 Ga0075434_100118079
320 Ga0075429_100044229
321 Ga0075429_100092178
322 Ga0075436_100120583
323 Ga0105240_10023278
324 Ga0105240_10128016
325 Ga0105240_10410322
326 Ga0111539_10031482
327 Ga0114129_10195841
328 Ga0114129_10211755
329 Ga0105248_10338270
330 Ga0105238_10086821
331 Ga0105249_10278345
332 Ga0105246_10114976
333 Ga0157371_10017296
334 Ga0157370_10066801
335 Ga0157370_10090297
336 Ga0157369_10023208
337 Ga0157369_10026218
338 Ga0157369_10090865
339 Ga0157369_10338764
340 Ga0157369_10820698
341 Ga0157374_10417137
342 Ga0157372_10026303
343 Ga0157372_10037373
344 Ga0157372_10053667
345 Ga0157372_10070234
346 Ga0157372_10244689
347 Ga0157372_10313595
348 Ga0157372_11008841
349 Ga0157375_10613284
350 Ga0163163_10122218
351 Ga0157379_11248370
352 Ga0182007_10211749
353 Ga0207699_10000045
354 Ga0207705_10006267
355 Ga0207705_10007008
356 Ga0207705_10016201
357 Ga0207705_10053851
358 Ga0207707_10013263
359 Ga0207695_10013174
360 Ga0207695_10452187
361 Ga0207660_10140330
362 Ga0207660_10160124
363 Ga0207657_10003242
364 Ga0207657_10046929
365 Ga0207649_10063437
366 Ga0207652_10109165
367 Ga0207646_10018397
368 Ga0207694_10000017
369 Ga0207650_10318626
370 Ga0207700_10001388
371 Ga0207690_10049734
372 Ga0207690_10087914
373 Ga0207706_10013932
374 Ga0207711_10298153
375 Ga0207661_10015830
376 Ga0207661_10092982
377 Ga0207661_10264459
378 Ga0207679_10041122
379 Ga0207679_10446393
380 Ga0207679_10870822
381 Ga0207667_10193360
382 Ga0207667_10347403
383 Ga0207667_10479673
384 Ga0207667_10602816
385 Ga0207703_10377236
386 Ga0207678_10001075
387 Ga0207702_10025772
388 Ga0207702_10616989
389 Ga0207674_10004918
390 Ga0207674_10143268
391 Ga0207674_10933892
392 Ga0307408_100018927
393 Ga0307408_100066512
394 Ga0307413_10134290
395 Ga0307410_10001274
396 Ga0307406_10026152
397 Ga0307406_10317146
398 Ga0307406_10490479
399 Ga0307407_10003541
400 Ga0307407_10380903
401 Ga0307412_10523730
402 Ga0307409_100286137
403 Ga0307409_100522297
404 Ga0307416_100003508
405 Ga0307416_100363422
406 Ga0307414_10016836
407 Ga0307411_10041752
408 Ga0307411_10087650
409 Ga0307415_100004534
410 Ga0373959_0000354
411 Ga0373926_0097674
412 Ga0373931_0165061
413 Ga0373935_0277128
414 Ga0373927_0062821
415 Ga0373925_0135648
416 Ga0395899_0008866
417 Ga0395899_0010696
418 Ga0395900_0015385
419 Ga0395900_0264870
420 Ga0395898_0101359
421 Ga0395905_0020629
422 Ga0395905_0141778
423 Ga0436364_1189400
424 Ga0395901_0019119
425 Ga0395901_0027589
426 Ga0436363_1475183
427 Ga0436363_1574291
428 Ga0466965_0044560
429 Ga0466961_0043175
430 Ga0451576_0099017
431 Ga0451576_0663168
432 Ga0466958_0157164
433 Ga0495592_0111484
434 Ga0495651_0030459
435 Ga0495594_0016167
436 Ga0495618_0053614
437 Ga0495630_0322911
438 Ga0495652_0231096
439 Ga0495665_0005102
440 Ga0495640_0030425
441 Ga0495586_0093398
442 Ga0495587_0038651
443 Ga0495645_0002523
444 Ga0495667_0038126
445 Ga0495599_0043122
446 Ga0495623_0048289
447 Ga0495600_0165212
448 Ga0495674_0089924
449 Ga0495675_0048560
450 Ga0495684_0008811
451 Ga0496104_0042218
452 Ga0496110_0957126
453 Ga0496112_0023140
454 Ga0496112_0611079
455 Ga0501296_016614
456 Ga0501033_0064900
457 Ga0501037_0048210
458 Ga0501038_0162922
459 Ga0501039_0607663
460 Ga0501040_0278665
461 Ga0501042_0117151
462 Ga0501048_0013534
463 Ga0501070_0653936
464 Ga0501076_0048928
465 Ga0501076_0354243
466 Ga0501249_048526
467 Ga0501229_017958
468 Ga0501079_0107062
469 Ga0501035_0001606
470 Ga0501035_0193046
471 Ga0501035_0219542
472 Ga0501044_0123771
473 Ga0501045_0023629
474 nmdc:mga05p37_229062_c1
475 nmdc:mga05p37_29816_c1
476 nmdc:mga05p37_72611_c1
477 nmdc:mga09592_41792_c1
478 nmdc:mga09592_46982_c1
479 nmdc:mga0qj67_11377_c1
480 nmdc:mga0qj67_22152_c1
481 nmdc:mga0qj67_322589_c1
482 nmdc:mga06r32_14777_c1
483 nmdc:mga06r32_65210_c1
484 nmdc:mga06r32_91017_c1
485 nmdc:mga0n895_87157_c1
486 nmdc:mga0a205_48494_c1
487 Ga0500628_009407
488 Ga0501084_0694467
489 Ga0501082_0134278
490 Ga0530510_0174255

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01227

GTP_cyclohydroI

GTP cyclohydrolase I

67

245

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z88-assembly1.cif.gz_I human gtp cyclohydrolase i in complex with allosteric inhibitor 0.9879 24 202
7ala-assembly1.cif.gz_D-2 human gch-gfrp inhibitory complex 0.987 24 202
6z89-assembly1.cif.gz_C-2 human gtp cyclohydrolase i in complex with allosteric inhibitor 0.9865 73 202
7ala-assembly1.cif.gz_C-2 human gch-gfrp inhibitory complex 0.9863 24 202
6z88-assembly1.cif.gz_E human gtp cyclohydrolase i in complex with allosteric inhibitor 0.9848 24 202
ID Description Score Start End Superfamily
1wm9E01 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1;GTP cyclohydrolase I, N-terminal domain 0.9989 24 71 1.10.286.10
1wurE01 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1;GTP cyclohydrolase I, N-terminal domain 0.9983 24 71 1.10.286.10
1wm9A01 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1;GTP cyclohydrolase I, N-terminal domain 0.9959 24 71 1.10.286.10
1wm9B01 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1;GTP cyclohydrolase I, N-terminal domain 0.9937 24 71 1.10.286.10
af_P22288_48_107_1.10.286.10 Mainly Alpha;Orthogonal Bundle;GTP Cyclohydrolase I; Chain A, domain 1;GTP cyclohydrolase I, N-terminal domain 0.9936 24 68 1.10.286.10
ID Description Score Start End GO Terms
AF-X1MIN2-F1-model_v4 GTP cyclohydrolase I (EC 3.5.4.16) 0.9996 75 166 GO:0003934
GO:0005525
GO:0005737
GO:0006729
GO:0008270
GO:0046654
AF-A0A816E1M8-F1-model_v4 GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) 0.9946 24 162 GO:0003934
GO:0005525
GO:0005737
GO:0006729
GO:0008270
GO:0046654
AF-A0A284QYY9-F1-model_v4 GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) 0.991 24 162 GO:0003934
GO:0005525
GO:0005737
GO:0006729
GO:0008270
GO:0046654
GO:0046656
AF-A0A7R9MF88-F1-model_v4 GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) 0.9908 24 167 GO:0003934
GO:0005525
GO:0005737
GO:0006729
GO:0008270
GO:0046654
AF-A0A3D0K4H9-F1-model_v4 deleted 0.9905 24 137

Map