F357237

General Info

Members Datasets Scaffolds Average Seq Length
245 177 490 488

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100159106|Ga0097621_1001591062
Length 534
Sequence VLIRDNQPSIEHSIPVNDEPRTRSEVKIPNGMSVQNRVMPETASESPAAPIKELKNFVDGEFVSGVRLFDDINPADGTVIAQVAEAGPELVDNAVQAARRALDGEWGSWGVRQRAALLYKIAEGIEARFEEFVRAESADTGKPFALASRLDIPRAAANFRVFADLIKTAPLEAFETETADGKRALNYAVRKPIGVVGIITPWNLPLLLLTWKVAPALACGNAVVVKPSEETPASATLLAEVMRDAGVPRGVFNLVHGFGEGSTGEHLVSHGGINALTFTGESRTGAAIMKACAEGVKPVSFELGGKNPAIIFADCDRDETVQQMSDAIFLNTGQVCLCAERVYVERSIYSWFVSAMKERAESLNVGWPGDEATNLGPLISAAHREKVLSYFRAARDGGATIVTGGDVPKFGDARDNGFYVQPTILTGLAESSCCVTEEIFGPVCHIAPFDTEEEAVAMANDTEYGLAASIWTNDLKRAHRVARQMNVGITWVNCWFLRDLRTPFGGVGLSGVGREGGVHSLNFYSELNNICIRL

Samples

Sample ID Description Type Environment
1 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
26 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
27 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
28 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
29 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
30 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
50 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
51 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
52 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
64 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
65 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
66 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
67 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
84 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
85 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
86 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
87 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
88 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
89 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
90 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
91 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
92 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
107 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
116 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
117 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
134 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
135 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
146 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
149 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
150 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
151 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
152 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
153 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
156 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
157 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
158 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
159 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
160 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
161 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
162 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
163 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
164 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
165 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
166 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
167 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
168 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
169 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
170 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
171 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
172 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
173 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
174 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
175 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
176 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
177 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.35
Metatranscriptomes 3.27
Isolates 9.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.31
Nodule 0.82
Rhizoplane 2.04
Rhizosphere 81.63
Stem 0
Stem Tuber 0
Unclassified 1.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0097621_100159106 3300006237 Bacteria 1941
2 LJNas_1000035 3300000546 Bacteria 18298
3 Ga0070659_100050844 3300005366 Bacteria 3258
4 Ga0070709_10002949 3300005434 Bacteria 9163
5 Ga0070709_10025309 3300005434 Bacteria 3505
6 Ga0070714_100000458 3300005435 Bacteria 29649
7 Ga0070713_100000021 3300005436 Bacteria 107806
8 Ga0070713_100000387 3300005436 Bacteria 28223
9 Ga0070710_10008486 3300005437 Bacteria 5001
10 Ga0070710_10014078 3300005437 Bacteria 4019
11 Ga0070711_100000248 3300005439 Bacteria 27500
12 Ga0070711_100002260 3300005439 Bacteria 10929
13 Ga0070711_100016757 3300005439 Bacteria 4658
14 Ga0070708_100000532 3300005445 Bacteria 28686
15 Ga0070708_100020705 3300005445 Bacteria 5553
16 Ga0070708_100022228 3300005445 Bacteria 5377
17 Ga0070678_100021798 3300005456 Bacteria 4232
18 Ga0070681_10119423 3300005458 Bacteria 2572
19 Ga0070706_100000534 3300005467 Bacteria 44214
20 Ga0070706_100048110 3300005467 Bacteria 3936
21 Ga0070706_100063564 3300005467 Bacteria 3411
22 Ga0070707_100000558 3300005468 Bacteria 37450
23 Ga0070707_100094859 3300005468 Bacteria 2889
24 Ga0070698_100000989 3300005471 Bacteria 31283
25 Ga0070699_100001581 3300005518 Bacteria 20812
26 Ga0070699_100011485 3300005518 Bacteria 7647
27 Ga0070697_100000241 3300005536 Bacteria 44319
28 Ga0070717_10002716 3300006028 Bacteria 12485
29 Ga0070717_10024264 3300006028 Bacteria 4813
30 Ga0070712_100000509 3300006175 Bacteria 22272
31 Ga0070712_100002473 3300006175 Bacteria 11390
32 Ga0070712_100020652 3300006175 Bacteria 4313
33 Ga0075367_10000473 3300006178 Bacteria 15016
34 Ga0075428_100038862 3300006844 Bacteria 5237
35 Ga0105240_10021080 3300009093 Bacteria 8674
36 Ga0099796_10017658 3300010159 Bacteria 2128
37 Ga0157369_10112958 3300013105 Bacteria 2886
38 Ga0157374_10082219 3300013296 Bacteria 3057
39 Ga0182008_10000725 3300014497 Bacteria 23460
40 Ga0182006_1015583 3300015261 Bacteria 3256
41 Ga0182007_10000781 3300015262 Bacteria 17782
42 Ga0224569_100080 3300022732 Bacteria 6418
43 Ga0224572_1004460 3300024225 Bacteria 2436
44 Ga0228598_1000805 3300024227 Bacteria 6765
45 Ga0228598_1001034 3300024227 Bacteria 6122
46 Ga0207426_1014108 3300025302 Bacteria 2938
47 Ga0207692_10009765 3300025898 Bacteria 4019
48 Ga0207699_10008043 3300025906 Bacteria 5181
49 Ga0207684_10000229 3300025910 Bacteria 85591
50 Ga0207707_10042608 3300025912 Bacteria 3960
51 Ga0207695_10021527 3300025913 Bacteria 7353
52 Ga0207693_10000047 3300025915 Bacteria 100876
53 Ga0207693_10000050 3300025915 Bacteria 100076
54 Ga0207693_10047952 3300025915 Unclassified 3356
55 Ga0207693_10115306 3300025915 Unclassified 2109
56 Ga0207663_10000679 3300025916 Bacteria 15066
57 Ga0207663_10011996 3300025916 Bacteria 4672
58 Ga0207646_10001797 3300025922 Bacteria 25930
59 Ga0207646_10080139 3300025922 Bacteria 2919
60 Ga0207700_10000069 3300025928 Bacteria 63176
61 Ga0207700_10000828 3300025928 Bacteria 17894
62 Ga0207664_10000483 3300025929 Bacteria 28328
63 Ga0207664_10009056 3300025929 Bacteria 6972
64 Ga0207665_10004295 3300025939 Bacteria 9474
65 Ga0207665_10050196 3300025939 Unclassified 2805
66 Ga0207691_10017506 3300025940 Bacteria 6794
67 Ga0207641_10053957 3300026088 Bacteria 3409
68 Ga0207675_100077158 3300026118 Bacteria 3121
69 Ga0265356_1000608 3300028017 Bacteria 6267
70 Ga0265356_1002237 3300028017 Bacteria 2630
71 Ga0307515_10000621 3300028794 Bacteria 82840
72 Ga0265338_10067898 3300028800 Bacteria 3075
73 Ga0307511_10023008 3300030521 Bacteria 5823
74 Ga0307512_10001781 3300030522 Bacteria 29274
75 Ga0307512_10035974 3300030522 Bacteria 4209
76 Ga0314311_1097675 3300030733 Bacteria 2587
77 Ga0265762_1000028 3300030760 Bacteria 16236
78 Ga0265762_1000378 3300030760 Bacteria 7635
79 Ga0265770_1005469 3300030878 Bacteria 1752
80 Ga0265760_10010665 3300031090 Bacteria 2625
81 Ga0265760_10010963 3300031090 Bacteria 2589
82 Ga0265760_10013319 3300031090 Bacteria 2355
83 Ga0265760_10023281 3300031090 Bacteria 1800
84 Ga0265760_10030820 3300031090 Bacteria 1580
85 Ga0265325_10011898 3300031241 Bacteria 4989
86 Ga0265316_10020186 3300031344 Bacteria 5677
87 Ga0265316_10102561 3300031344 Bacteria 2173
88 Ga0265316_10162578 3300031344 Bacteria 1669
89 Ga0307513_10000219 3300031456 Bacteria 82663
90 Ga0307513_10065174 3300031456 Bacteria 3833
91 Ga0307509_10017991 3300031507 Bacteria 8112
92 Ga0307509_10068691 3300031507 Bacteria 3707
93 Ga0307508_10013948 3300031616 Bacteria 7333
94 Ga0307508_10015734 3300031616 Bacteria 6893
95 Ga0307514_10071343 3300031649 Bacteria 2605
96 Ga0265342_10018376 3300031712 Bacteria 4531
97 Ga0307516_10009368 3300031730 Bacteria 10927
98 Ga0307507_10044863 3300033179 Bacteria 4360
99 Ga0307507_10101863 3300033179 Bacteria 2399
100 Ga0307510_10018824 3300033180 Bacteria 8107
101 Ga0307510_10067014 3300033180 Bacteria 3619
102 Ga0316212_1005028 3300033547 Bacteria 1920
103 Ga0373934_0012929 3300035086 Bacteria 3155
104 Ga0373923_0001231 3300035111 Bacteria 7178
105 Ga0373936_0007025 3300035113 Bacteria 4236
106 Ga0373945_0000345 3300035116 Bacteria 13252
107 Ga0373956_0009018 3300035119 Bacteria 4044
108 Ga0373943_0001549 3300035170 Bacteria 10420
109 Ga0373924_0007505 3300035410 Bacteria 3939
110 Ga0373935_0017553 3300035692 Bacteria 4344
111 Ga0373927_0000300 3300035695 Bacteria 38888
112 Ga0373933_0018272 3300035724 Bacteria 3941
113 Ga0373947_0001619 3300035725 Bacteria 13813
114 Ga0373937_0119634 3300036401 Bacteria 2454
115 Ga0373937_0139489 3300036401 Unclassified 2268
116 Ga0373925_0000279 3300037068 Bacteria 53371
117 Ga0373925_0021594 3300037068 Bacteria 4692
118 Ga0395900_0000548 3300037418 Bacteria 52229
119 Ga0395898_0009800 3300037466 Bacteria 10041
120 Ga0395898_0012419 3300037466 Bacteria 8805
121 Ga0395898_0228077 3300037466 Bacteria 1776
122 Ga0395905_0009346 3300037471 Bacteria 9586
123 Ga0395901_0003712 3300038443 Bacteria 15389
124 Ga0439436_0002131 3300041404 Bacteria 5913
125 Ga0439439_0010349 3300041406 Bacteria 2227
126 Ga0451853_1794718 3300041512 Bacteria 5504
127 Ga0439448_0027159 3300042005 Bacteria 1803
128 Ga0439432_012710 3300042006 Bacteria 2874
129 Ga0439449_0002697 3300042007 Bacteria 6910
130 Ga0439449_0005850 3300042007 Bacteria 4703
131 Ga0439457_003661 3300042014 Bacteria 4156
132 Ga0450899_000606 3300042135 Bacteria 4078
133 Ga0450906_000387 3300042145 Bacteria 8999
134 Ga0439458_0004675 3300042157 Bacteria 3123
135 Ga0466961_0019332 3300044693 Bacteria 4383
136 Ga0466963_0002775 3300044694 Bacteria 9871
137 Ga0466960_0035660 3300044901 Bacteria 2326
138 Ga0466967_0002639 3300045976 Bacteria 11298
139 Ga0495592_0020838 3300046454 Bacteria 4987
140 Ga0495592_0034345 3300046454 Bacteria 3823
141 Ga0495629_0001766 3300046459 Bacteria 16951
142 Ga0495629_0003996 3300046459 Bacteria 11085
143 Ga0495629_0067164 3300046459 Bacteria 2502
144 Ga0495651_0001749 3300046462 Bacteria 16748
145 Ga0495651_0003292 3300046462 Bacteria 12402
146 Ga0495653_0006999 3300046463 Bacteria 9254
147 Ga0495580_0001193 3300046472 Bacteria 22854
148 Ga0495580_0001725 3300046472 Bacteria 19215
149 Ga0495580_0145054 3300046472 Bacteria 1645
150 Ga0495582_0012909 3300046473 Bacteria 4602
151 Ga0495662_0003151 3300046476 Bacteria 8319
152 Ga0495664_0000716 3300046477 Bacteria 16896
153 Ga0495664_0003534 3300046477 Bacteria 8523
154 Ga0495664_0022215 3300046477 Bacteria 3675
155 Ga0495664_0023900 3300046477 Bacteria 3548
156 Ga0495594_0023925 3300046499 Bacteria 3277
157 Ga0495607_0048659 3300046501 Bacteria 2478
158 Ga0495608_0031483 3300046511 Bacteria 3587
159 Ga0495618_0044683 3300046514 Bacteria 2794
160 Ga0495628_0005022 3300046516 Bacteria 11630
161 Ga0495628_0031459 3300046516 Bacteria 4292
162 Ga0495628_0060206 3300046516 Bacteria 2980
163 Ga0495630_0071554 3300046517 Bacteria 2610
164 Ga0495666_0001256 3300046526 Bacteria 12288
165 Ga0495652_0034250 3300046529 Bacteria 4427
166 Ga0495652_0066526 3300046529 Bacteria 3024
167 Ga0495586_0015305 3300046535 Bacteria 4080
168 Ga0495586_0061167 3300046535 Bacteria 2049
169 Ga0495587_0003314 3300046536 Bacteria 10751
170 Ga0495587_0010097 3300046536 Bacteria 6024
171 Ga0495645_0004757 3300046543 Bacteria 9281
172 Ga0495645_0007983 3300046543 Bacteria 7368
173 Ga0495645_0098856 3300046543 Bacteria 2076
174 Ga0495667_0001746 3300046559 Bacteria 14443
175 Ga0495634_0009223 3300046642 Bacteria 7280
176 Ga0495634_0011487 3300046642 Bacteria 6442
177 Ga0495635_0000793 3300046663 Bacteria 20609
178 Ga0495657_0001335 3300046675 Bacteria 21474
179 Ga0495599_0040163 3300046678 Bacteria 2938
180 Ga0495599_0105550 3300046678 Bacteria 1755
181 Ga0495646_0006460 3300046680 Bacteria 7437
182 Ga0495646_0036831 3300046680 Bacteria 3028
183 Ga0495658_0046197 3300046683 Bacteria 2447
184 Ga0495669_0031599 3300046684 Bacteria 2325
185 Ga0495613_0000568 3300046689 Bacteria 30396
186 Ga0495613_0006576 3300046689 Bacteria 8689
187 Ga0495624_0051071 3300046690 Bacteria 2618
188 Ga0495624_0065684 3300046690 Bacteria 2266
189 Ga0495600_0005294 3300046809 Bacteria 7770
190 Ga0495581_0016176 3300047315 Bacteria 4336
191 Ga0495604_0000754 3300047317 Bacteria 27213
192 Ga0495604_0007649 3300047317 Bacteria 8558
193 Ga0495674_0022270 3300047319 Bacteria 5843
194 Ga0495676_0002371 3300047321 Bacteria 16714
195 Ga0495687_018395 3300047443 Bacteria 3454
196 Ga0495684_0005887 3300047471 Bacteria 9525
197 Ga0495593_0000516 3300047673 Bacteria 21872
198 Ga0495602_0020117 3300048088 Bacteria 6602
199 Ga0495602_0023670 3300048088 Bacteria 5979
200 Ga0495614_0000467 3300048089 Bacteria 16661
201 Ga0495614_0016243 3300048089 Bacteria 3241
202 Ga0496104_0155959 3300048907 Bacteria 2191
203 Ga0496109_0052051 3300048912 Bacteria 3731
204 Ga0496112_0064955 3300048915 Bacteria 3602
205 Ga0496112_0067144 3300048915 Bacteria 3539
206 Ga0496115_0003383 3300048918 Bacteria 11447
207 Ga0496124_0001828 3300048927 Bacteria 29413
208 Ga0501033_0010310 3300049570 Bacteria 7173
209 Ga0501034_0005968 3300049571 Bacteria 13182
210 Ga0501044_0102244 3300049823 Bacteria 2882
211 nmdc:mga06z11_1619_c1 3300050494 Bacteria 8417
212 Ga0495601_0009382 3300053077 Bacteria 5788
213 Ga0500578_0032998 3300053086 Bacteria 3328
214 Ga0500644_0001228 3300053088 Bacteria 7094
215 Ga0500566_0054204 3300053094 Bacteria 2287
216 Ga0500640_005872 3300053095 Bacteria 4629
217 Ga0500614_016060 3300053123 Bacteria 1676
218 Ga0500658_0002740 3300053134 Bacteria 6779
219 Ga0500561_0000378 3300053137 Bacteria 7377
220 Ga0500600_0015773 3300053149 Bacteria 4579
221 Ga0500616_0022395 3300053153 Bacteria 3527
222 Ga0500634_0014506 3300053161 Bacteria 4158
223 2585303732 2582581313 Bacteria 10042643
224 2585312383 2582581314 Bacteria 11452267
225 2585313956 2582581314 Bacteria 11452267
226 2644039900 2643221605 Bacteria 4772303
227 2785339089 2784746763 Bacteria 9783172
228 2786673902 2786546132 Bacteria 10419719
229 2812361320 2811994879 Bacteria 9313447
230 2862389857 2862382967 Bacteria 10317375
231 2863407901 2863404153 Bacteria 9672205
232 2912723238 2912715099 Bacteria 9460473
233 2946064769 2946064051 Bacteria 8957905
234 2946073175 2946072368 Bacteria 8999607
235 2954681515 2954673503 Bacteria 9685905
236 2954682643 2954682443 Bacteria 9862841
237 2954701192 2954691527 Bacteria 10720516
238 2954706150 2954701450 Bacteria 10834262
239 2954711888 2954711539 Bacteria 10867210
240 2954721821 2954721474 Bacteria 10456478
241 2954740718 2954740390 Bacteria 10229294
242 2954758844 2954749733 Bacteria 10366972
243 2954759728 2954759201 Bacteria 9358192
244 8008565657 8008558824 Bacteria 10610750
245 8054002913 8054002106 Bacteria 7987183
246 Ga0097621_100159106
247 LJNas_1000035
248 Ga0070659_100050844
249 Ga0070709_10002949
250 Ga0070709_10025309
251 Ga0070714_100000458
252 Ga0070713_100000021
253 Ga0070713_100000387
254 Ga0070710_10008486
255 Ga0070710_10014078
256 Ga0070711_100000248
257 Ga0070711_100002260
258 Ga0070711_100016757
259 Ga0070708_100000532
260 Ga0070708_100020705
261 Ga0070708_100022228
262 Ga0070678_100021798
263 Ga0070681_10119423
264 Ga0070706_100000534
265 Ga0070706_100048110
266 Ga0070706_100063564
267 Ga0070707_100000558
268 Ga0070707_100094859
269 Ga0070698_100000989
270 Ga0070699_100001581
271 Ga0070699_100011485
272 Ga0070697_100000241
273 Ga0070717_10002716
274 Ga0070717_10024264
275 Ga0070712_100000509
276 Ga0070712_100002473
277 Ga0070712_100020652
278 Ga0075367_10000473
279 Ga0075428_100038862
280 Ga0105240_10021080
281 Ga0099796_10017658
282 Ga0157369_10112958
283 Ga0157374_10082219
284 Ga0182008_10000725
285 Ga0182006_1015583
286 Ga0182007_10000781
287 Ga0224569_100080
288 Ga0224572_1004460
289 Ga0228598_1000805
290 Ga0228598_1001034
291 Ga0207426_1014108
292 Ga0207692_10009765
293 Ga0207699_10008043
294 Ga0207684_10000229
295 Ga0207707_10042608
296 Ga0207695_10021527
297 Ga0207693_10000047
298 Ga0207693_10000050
299 Ga0207693_10047952
300 Ga0207693_10115306
301 Ga0207663_10000679
302 Ga0207663_10011996
303 Ga0207646_10001797
304 Ga0207646_10080139
305 Ga0207700_10000069
306 Ga0207700_10000828
307 Ga0207664_10000483
308 Ga0207664_10009056
309 Ga0207665_10004295
310 Ga0207665_10050196
311 Ga0207691_10017506
312 Ga0207641_10053957
313 Ga0207675_100077158
314 Ga0265356_1000608
315 Ga0265356_1002237
316 Ga0307515_10000621
317 Ga0265338_10067898
318 Ga0307511_10023008
319 Ga0307512_10001781
320 Ga0307512_10035974
321 Ga0314311_1097675
322 Ga0265762_1000028
323 Ga0265762_1000378
324 Ga0265770_1005469
325 Ga0265760_10010665
326 Ga0265760_10010963
327 Ga0265760_10013319
328 Ga0265760_10023281
329 Ga0265760_10030820
330 Ga0265325_10011898
331 Ga0265316_10020186
332 Ga0265316_10102561
333 Ga0265316_10162578
334 Ga0307513_10000219
335 Ga0307513_10065174
336 Ga0307509_10017991
337 Ga0307509_10068691
338 Ga0307508_10013948
339 Ga0307508_10015734
340 Ga0307514_10071343
341 Ga0265342_10018376
342 Ga0307516_10009368
343 Ga0307507_10044863
344 Ga0307507_10101863
345 Ga0307510_10018824
346 Ga0307510_10067014
347 Ga0316212_1005028
348 Ga0373934_0012929
349 Ga0373923_0001231
350 Ga0373936_0007025
351 Ga0373945_0000345
352 Ga0373956_0009018
353 Ga0373943_0001549
354 Ga0373924_0007505
355 Ga0373935_0017553
356 Ga0373927_0000300
357 Ga0373933_0018272
358 Ga0373947_0001619
359 Ga0373937_0119634
360 Ga0373937_0139489
361 Ga0373925_0000279
362 Ga0373925_0021594
363 Ga0395900_0000548
364 Ga0395898_0009800
365 Ga0395898_0012419
366 Ga0395898_0228077
367 Ga0395905_0009346
368 Ga0395901_0003712
369 Ga0439436_0002131
370 Ga0439439_0010349
371 Ga0451853_1794718
372 Ga0439448_0027159
373 Ga0439432_012710
374 Ga0439449_0002697
375 Ga0439449_0005850
376 Ga0439457_003661
377 Ga0450899_000606
378 Ga0450906_000387
379 Ga0439458_0004675
380 Ga0466961_0019332
381 Ga0466963_0002775
382 Ga0466960_0035660
383 Ga0466967_0002639
384 Ga0495592_0020838
385 Ga0495592_0034345
386 Ga0495629_0001766
387 Ga0495629_0003996
388 Ga0495629_0067164
389 Ga0495651_0001749
390 Ga0495651_0003292
391 Ga0495653_0006999
392 Ga0495580_0001193
393 Ga0495580_0001725
394 Ga0495580_0145054
395 Ga0495582_0012909
396 Ga0495662_0003151
397 Ga0495664_0000716
398 Ga0495664_0003534
399 Ga0495664_0022215
400 Ga0495664_0023900
401 Ga0495594_0023925
402 Ga0495607_0048659
403 Ga0495608_0031483
404 Ga0495618_0044683
405 Ga0495628_0005022
406 Ga0495628_0031459
407 Ga0495628_0060206
408 Ga0495630_0071554
409 Ga0495666_0001256
410 Ga0495652_0034250
411 Ga0495652_0066526
412 Ga0495586_0015305
413 Ga0495586_0061167
414 Ga0495587_0003314
415 Ga0495587_0010097
416 Ga0495645_0004757
417 Ga0495645_0007983
418 Ga0495645_0098856
419 Ga0495667_0001746
420 Ga0495634_0009223
421 Ga0495634_0011487
422 Ga0495635_0000793
423 Ga0495657_0001335
424 Ga0495599_0040163
425 Ga0495599_0105550
426 Ga0495646_0006460
427 Ga0495646_0036831
428 Ga0495658_0046197
429 Ga0495669_0031599
430 Ga0495613_0000568
431 Ga0495613_0006576
432 Ga0495624_0051071
433 Ga0495624_0065684
434 Ga0495600_0005294
435 Ga0495581_0016176
436 Ga0495604_0000754
437 Ga0495604_0007649
438 Ga0495674_0022270
439 Ga0495676_0002371
440 Ga0495687_018395
441 Ga0495684_0005887
442 Ga0495593_0000516
443 Ga0495602_0020117
444 Ga0495602_0023670
445 Ga0495614_0000467
446 Ga0495614_0016243
447 Ga0496104_0155959
448 Ga0496109_0052051
449 Ga0496112_0064955
450 Ga0496112_0067144
451 Ga0496115_0003383
452 Ga0496124_0001828
453 Ga0501033_0010310
454 Ga0501034_0005968
455 Ga0501044_0102244
456 nmdc:mga06z11_1619_c1
457 Ga0495601_0009382
458 Ga0500578_0032998
459 Ga0500644_0001228
460 Ga0500566_0054204
461 Ga0500640_005872
462 Ga0500614_016060
463 Ga0500658_0002740
464 Ga0500561_0000378
465 Ga0500600_0015773
466 Ga0500616_0022395
467 Ga0500634_0014506
468 2585303732
469 2585312383
470 2585313956
471 2644039900
472 2785339089
473 2786673902
474 2812361320
475 2862389857
476 2863407901
477 2912723238
478 2946064769
479 2946073175
480 2954681515
481 2954682643
482 2954701192
483 2954706150
484 2954711888
485 2954721821
486 2954740718
487 2954758844
488 2954759728
489 8008565657
490 8054002913

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

62

530

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bzv-assembly1.cif.gz_B crystal structure of 2-aminomuconic 6-semialdehyde dehydrogenase from pseudomonas species ap-3 0.9868 1 483
5klm-assembly1.cif.gz_A crystal structure of 2-hydroxymuconate-6-semialdehyde derived intermediate in nad(+)-bound 2-aminomuconate 6-semialdehyde dehydrogenase n169d 0.9865 1 483
7bzv-assembly1.cif.gz_B crystal structure of 2-aminomuconic 6-semialdehyde dehydrogenase from pseudomonas species ap-3 0.9847 1 483
4i25-assembly1.cif.gz_A 2.00 angstroms x-ray crystal structure of nad- and substrate-bound 2-aminomuconate 6-semialdehyde dehydrogenase from pseudomonas fluorescens 0.9846 3 483
4ou2-assembly1.cif.gz_C a 2.15 angstroms x-ray crystal structure of e268a 2-aminomuconate 6-semialdehyde dehydrogenase catalytic intermediate from pseudomonas fluorescens 0.9846 3 483
ID Description Score Start End Superfamily
4i1wC02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9924 255 448 3.40.309.10
4i1wC02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9823 255 448 3.40.309.10
5kj5B01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9801 1 254 3.40.605.10
af_A0A1D6MRK0_1_96_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9785 160 254 3.40.605.10
af_Q18822_26_277_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9783 3 256 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A536VCE1-F1-model_v4 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85) 0.9883 67 483 GO:0016620
AF-A0A847DW48-F1-model_v4 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85) 0.9871 1 483 GO:0016620
AF-A0A847DW48-F1-model_v4 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85) 0.985 1 483 GO:0016620
AF-A0A536VCE1-F1-model_v4 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85) 0.9813 67 483 GO:0016620
AF-A0A2T9ULJ6-F1-model_v4 Aldehyde dehydrogenase 0.9766 286 463 GO:0016620

Map