F356494

General Info

Members Datasets Scaffolds Average Seq Length
244 156 488 415

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10391853|Ga0105239_103918532
Length 450
Sequence LSHARRKGAKKISAFLCAFAALRGKTIMATTVNIASDRLSTSLYALYALGLLTIVSVFNYLDRTLIYILFAPIKREMAFSDFQLGLLGTTSFVIFFTILGVPFGRLADRSSRKNMIAAGLAVWSLFSGLTGFANSFWSLFFCRVMVGVGEATLGPAALSLLSDYFPPRTRATVQSIYASGITLGAGLAFFLGGWIGLNFGWRTAFYFLGFPGVVVAVLVYFLREQPRGRTEAGPAKYTSNDWKLLFRSKPLRYHYAGYAMFALAANSLSIWGPTFFARVHGYSIATLGLVAGLTSLTAGIPSTVLGGYLSDRLRQVGPGGRMRLSSVASLLAIPFWIMLLFSSSVPVLLIAQFILLGLSLVWIAPSMADVHEITGPHLRGLGVGVFLCLVHVIAYGIGSPLIGKLNDLLGAATNPAVMRYGFLISPIACVFAGVLLWRGSRSLEQARASN

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
120 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
121 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
125 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300038698 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot15 Metagenome Rhizosphere
128 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
137 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
138 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
141 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
142 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
143 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
144 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
145 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
146 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
156 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 1.64
Rhizosphere 96.72
Stem 0
Stem Tuber 0
Unclassified 14.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10391853 3300010375 Unclassified 1571
2 MBSR1b_contig_13907095 2162886012 Unclassified 2052
3 MBSR1b_contig_1699581 2162886012 Unclassified 2054
4 JGI24751J29686_10000007 3300002459 Bacteria 129562
5 JGI25406J46586_10039389 3300003203 Bacteria 1684
6 rootL2_10053850 3300003322 Bacteria 1575
7 Ga0065714_10064426 3300005288 Bacteria 186606
8 Ga0065712_10067732 3300005290 Bacteria 130748
9 Ga0065715_10096539 3300005293 Unclassified 3861
10 Ga0065715_10096758 3300005293 Unclassified 3825
11 Ga0065715_10209185 3300005293 Bacteria 1322
12 Ga0070676_10015394 3300005328 Bacteria 4219
13 Ga0070690_100002989 3300005330 Bacteria 9161
14 Ga0070690_100009615 3300005330 Bacteria 5606
15 Ga0070670_100000043 3300005331 Bacteria 141622
16 Ga0070670_100214847 3300005331 Bacteria 1672
17 Ga0068869_100029073 3300005334 Bacteria 3868
18 Ga0070666_10014233 3300005335 Bacteria 5063
19 Ga0070682_100040213 3300005337 Unclassified 2876
20 Ga0068868_100001551 3300005338 Bacteria 15691
21 Ga0070689_100001432 3300005340 Bacteria 15211
22 Ga0070689_100141385 3300005340 Bacteria 1936
23 Ga0070692_10009983 3300005345 Bacteria 4304
24 Ga0070692_10016700 3300005345 Bacteria 3497
25 Ga0070692_10042603 3300005345 Bacteria 2331
26 Ga0070692_10057938 3300005345 Bacteria 2033
27 Ga0070692_10076734 3300005345 Bacteria 1791
28 Ga0070668_100277812 3300005347 Bacteria 1398
29 Ga0070669_100000120 3300005353 Bacteria 72772
30 Ga0070669_100002916 3300005353 Bacteria 12319
31 Ga0070673_100003740 3300005364 Bacteria 9541
32 Ga0070688_100144790 3300005365 Bacteria 1618
33 Ga0070667_100225764 3300005367 Bacteria 1668
34 Ga0070703_10017875 3300005406 Unclassified 2046
35 Ga0070713_100030962 3300005436 Bacteria 4255
36 Ga0070705_100026003 3300005440 Unclassified 3182
37 Ga0070700_100001193 3300005441 Bacteria 12869
38 Ga0070694_100013955 3300005444 Bacteria 5024
39 Ga0070694_100015891 3300005444 Bacteria 4737
40 Ga0070708_100202367 3300005445 Bacteria 1859
41 Ga0068867_100032033 3300005459 Bacteria 3799
42 Ga0070706_100143281 3300005467 Unclassified 2231
43 Ga0070707_100073246 3300005468 Bacteria 3302
44 Ga0070698_100006295 3300005471 Bacteria 12896
45 Ga0070698_100037773 3300005471 Bacteria 4978
46 Ga0070699_100036626 3300005518 Unclassified 4244
47 Ga0070684_100101006 3300005535 Bacteria 2577
48 Ga0070697_100050823 3300005536 Bacteria 3366
49 Ga0070697_100074495 3300005536 Bacteria 2789
50 Ga0068853_100014208 3300005539 Bacteria 6515
51 Ga0070686_100025535 3300005544 Unclassified 3556
52 Ga0070696_100047231 3300005546 Unclassified 2987
53 Ga0070696_100068239 3300005546 Bacteria 2496
54 Ga0070693_100010388 3300005547 Bacteria 4666
55 Ga0070693_100046444 3300005547 Bacteria 2466
56 Ga0070693_100173539 3300005547 Unclassified 1382
57 Ga0068857_100011588 3300005577 Bacteria 7671
58 Ga0068857_100062898 3300005577 Bacteria 3300
59 Ga0070702_100009087 3300005615 Bacteria 4849
60 Ga0070702_100009689 3300005615 Bacteria 4724
61 Ga0070702_100028841 3300005615 Bacteria 3012
62 Ga0070702_100083445 3300005615 Bacteria 1919
63 Ga0068859_100001336 3300005617 Bacteria 25188
64 Ga0068859_100014105 3300005617 Bacteria 8014
65 Ga0068859_100116411 3300005617 Bacteria 2737
66 Ga0068859_100119230 3300005617 Bacteria 2705
67 Ga0068859_100155304 3300005617 Bacteria 2365
68 Ga0068864_100000039 3300005618 Bacteria 176547
69 Ga0068864_100010487 3300005618 Bacteria 7657
70 Ga0068864_100078058 3300005618 Unclassified 2897
71 Ga0068864_100143258 3300005618 Bacteria 2158
72 Ga0068866_10007749 3300005718 Bacteria 4505
73 Ga0068861_100028882 3300005719 Bacteria 4051
74 Ga0068851_10001248 3300005834 Bacteria 11064
75 Ga0068863_100021022 3300005841 Bacteria 6233
76 Ga0068863_100048175 3300005841 Unclassified 4041
77 Ga0068863_100128781 3300005841 Unclassified 2416
78 Ga0068858_100160801 3300005842 Bacteria 2114
79 Ga0068858_100161961 3300005842 Bacteria 2106
80 Ga0068858_100183882 3300005842 Unclassified 1974
81 Ga0068860_100032231 3300005843 Bacteria 5037
82 Ga0068860_100269715 3300005843 Unclassified 1661
83 Ga0068862_100003408 3300005844 Bacteria 13712
84 Ga0068862_100076131 3300005844 Bacteria 2904
85 Ga0068862_100092956 3300005844 Bacteria 2630
86 Ga0081539_10000605 3300005985 Bacteria 72953
87 Ga0081539_10000823 3300005985 Bacteria 59946
88 Ga0081539_10079534 3300005985 Bacteria 1727
89 Ga0070717_10000173 3300006028 Bacteria 48151
90 Ga0070716_100013830 3300006173 Unclassified 4122
91 Ga0097621_100010088 3300006237 Bacteria 6890
92 Ga0068871_100008067 3300006358 Bacteria 7558
93 Ga0068871_100290006 3300006358 Bacteria 1434
94 Ga0075428_100021145 3300006844 Bacteria 7206
95 Ga0075433_10005965 3300006852 Bacteria 9593
96 Ga0075433_10091344 3300006852 Bacteria 2691
97 Ga0075434_100057283 3300006871 Bacteria 3873
98 Ga0097620_100001336 3300006931 Bacteria 25188
99 Ga0097620_100014106 3300006931 Bacteria 8014
100 Ga0097620_100116409 3300006931 Bacteria 2737
101 Ga0097620_100119232 3300006931 Bacteria 2705
102 Ga0097620_100155289 3300006931 Bacteria 2365
103 Ga0075435_100004311 3300007076 Bacteria 9780
104 Ga0105240_10030120 3300009093 Bacteria 7058
105 Ga0105240_10133663 3300009093 Bacteria 2972
106 Ga0105240_10218586 3300009093 Bacteria 2221
107 Ga0105240_10305083 3300009093 Bacteria 1820
108 Ga0111539_10139456 3300009094 Bacteria 2839
109 Ga0105245_10053269 3300009098 Bacteria 3631
110 Ga0105247_10003721 3300009101 Bacteria 9896
111 Ga0105247_10093777 3300009101 Bacteria 1909
112 Ga0114129_10036160 3300009147 Bacteria 6975
113 Ga0114129_10332039 3300009147 Bacteria 2018
114 Ga0105243_10013684 3300009148 Bacteria 6138
115 Ga0105243_10036772 3300009148 Unclassified 3803
116 Ga0105243_10115108 3300009148 Bacteria 2257
117 Ga0105241_10053806 3300009174 Bacteria 3080
118 Ga0105241_10101275 3300009174 Bacteria 2290
119 Ga0105241_10345767 3300009174 Bacteria 1290
120 Ga0105242_10024542 3300009176 Unclassified 4762
121 Ga0105242_10086877 3300009176 Unclassified 2625
122 Ga0105248_10054441 3300009177 Bacteria 4486
123 Ga0105248_10416474 3300009177 Bacteria 1513
124 Ga0105237_10001054 3300009545 Bacteria 37030
125 Ga0105238_10002831 3300009551 Bacteria 17307
126 Ga0105249_10020231 3300009553 Bacteria 5949
127 Ga0105249_10193669 3300009553 Bacteria 1985
128 Ga0105246_10088300 3300011119 Bacteria 2227
129 Ga0157373_10014840 3300013100 Bacteria 5706
130 Ga0157373_10061026 3300013100 Bacteria 2670
131 Ga0157378_10016934 3300013297 Bacteria 6390
132 Ga0163162_10007868 3300013306 Bacteria 10385
133 Ga0157372_10007175 3300013307 Bacteria 11861
134 Ga0157375_10000018 3300013308 Bacteria 285123
135 Ga0157375_10007031 3300013308 Bacteria 9831
136 Ga0157375_10016654 3300013308 Bacteria 6611
137 Ga0163163_10000559 3300014325 Bacteria 32681
138 Ga0157380_10008300 3300014326 Bacteria 7402
139 Ga0157380_10066576 3300014326 Bacteria 2898
140 Ga0163161_10159860 3300017792 Bacteria 1717
141 Ga0207653_10002438 3300025885 Bacteria 5917
142 Ga0207710_10032315 3300025900 Bacteria 2292
143 Ga0207647_10001341 3300025904 Bacteria 18918
144 Ga0207645_10093396 3300025907 Unclassified 1935
145 Ga0207684_10000110 3300025910 Bacteria 153722
146 Ga0207695_10014828 3300025913 Bacteria 9205
147 Ga0207695_10056413 3300025913 Bacteria 4087
148 Ga0207695_10189210 3300025913 Bacteria 1976
149 Ga0207671_10028723 3300025914 Unclassified 4155
150 Ga0207662_10003829 3300025918 Bacteria 7819
151 Ga0207681_10000101 3300025923 Bacteria 72788
152 Ga0207681_10009059 3300025923 Bacteria 6080
153 Ga0207694_10008912 3300025924 Bacteria 7574
154 Ga0207650_10000009 3300025925 Bacteria 483583
155 Ga0207700_10015962 3300025928 Bacteria 4975
156 Ga0207706_10115518 3300025933 Unclassified 2360
157 Ga0207709_10005477 3300025935 Bacteria 7206
158 Ga0207709_10010521 3300025935 Bacteria 5093
159 Ga0207670_10000752 3300025936 Bacteria 17026
160 Ga0207670_10219446 3300025936 Unclassified 1455
161 Ga0207665_10064850 3300025939 Bacteria 2482
162 Ga0207689_10028238 3300025942 Bacteria 4693
163 Ga0207689_10104359 3300025942 Unclassified 2329
164 Ga0207689_10129489 3300025942 Bacteria 2077
165 Ga0207679_10076082 3300025945 Bacteria 2549
166 Ga0207651_10003359 3300025960 Bacteria 7849
167 Ga0207640_10092300 3300025981 Bacteria 2100
168 Ga0207677_10000011 3300026023 Bacteria 199704
169 Ga0207703_10045805 3300026035 Bacteria 3519
170 Ga0207703_10097291 3300026035 Bacteria 2487
171 Ga0207703_10196609 3300026035 Unclassified 1789
172 Ga0207639_10000045 3300026041 Bacteria 136152
173 Ga0207639_10197352 3300026041 Bacteria 1723
174 Ga0207708_10001953 3300026075 Bacteria 15207
175 Ga0207708_10016422 3300026075 Bacteria 5567
176 Ga0207708_10105194 3300026075 Unclassified 2187
177 Ga0207708_10121657 3300026075 Bacteria 2034
178 Ga0207641_10035855 3300026088 Bacteria 4136
179 Ga0207641_10097965 3300026088 Unclassified 2578
180 Ga0207648_10147424 3300026089 Bacteria 2076
181 Ga0207648_10267998 3300026089 Unclassified 1525
182 Ga0207676_10000008 3300026095 Bacteria 588913
183 Ga0207676_10072806 3300026095 Bacteria 2763
184 Ga0207674_10030260 3300026116 Bacteria 5694
185 Ga0207674_10037693 3300026116 Bacteria 5024
186 Ga0207674_10080118 3300026116 Unclassified 3269
187 Ga0207675_100021636 3300026118 Bacteria 5988
188 Ga0209970_1002445 3300027614 Bacteria 3163
189 Ga0209983_1001573 3300027665 Bacteria 5055
190 Ga0209971_1000565 3300027682 Bacteria 9698
191 Ga0209974_10000479 3300027876 Bacteria 13297
192 Ga0207428_10062860 3300027907 Bacteria 2934
193 Ga0268265_10000501 3300028380 Bacteria 40501
194 Ga0268265_10015134 3300028380 Bacteria 5272
195 Ga0268265_10047884 3300028380 Bacteria 3206
196 Ga0268265_10110169 3300028380 Bacteria 2246
197 Ga0268265_10121991 3300028380 Bacteria 2149
198 Ga0268264_10016643 3300028381 Bacteria 6021
199 Ga0268264_10140396 3300028381 Bacteria 2154
200 Ga0307408_100179690 3300031548 Bacteria 1696
201 Ga0307508_10006933 3300031616 Bacteria 10577
202 Ga0307405_10107763 3300031731 Bacteria 1881
203 Ga0307406_10002322 3300031901 Bacteria 10334
204 Ga0307406_10253111 3300031901 Bacteria 1328
205 Ga0307416_100027875 3300032002 Bacteria 4191
206 Ga0307414_10001349 3300032004 Bacteria 12695
207 Ga0373949_0010963 3300035090 Bacteria 1992
208 Ga0373961_0000663 3300035241 Bacteria 12197
209 Ga0373935_0056854 3300035692 Unclassified 2495
210 Ga0242419_000557 3300038698 Bacteria 2051
211 Ga0242420_000257 3300038996 Bacteria 5714
212 Ga0436365_0909810 3300039437 Bacteria 2022
213 Ga0451577_0137196 3300042876 Bacteria 2197
214 Ga0453683_0145065 3300044673 Bacteria 1498
215 Ga0496106_0016526 3300048909 Bacteria 5462
216 Ga0496107_0029673 3300048910 Bacteria 3893
217 Ga0496113_0092230 3300048916 Bacteria 2336
218 Ga0496114_0000024 3300048917 Bacteria 216712
219 Ga0501296_000571 3300049519 Bacteria 3622
220 Ga0501298_000707 3300049521 Bacteria 4673
221 Ga0501300_004258 3300049523 Bacteria 2122
222 Ga0501073_0006011 3300049589 Bacteria 9056
223 Ga0501202_005134 3300049652 Bacteria 2314
224 Ga0501206_002645 3300049653 Bacteria 2254
225 Ga0501216_003322 3300049660 Bacteria 2337
226 Ga0501217_000049 3300049661 Bacteria 13643
227 Ga0501227_000317 3300049665 Bacteria 10069
228 Ga0501242_003466 3300049674 Bacteria 1709
229 Ga0501243_002848 3300049675 Bacteria 2549
230 Ga0501225_0013120 3300049705 Unclassified 2320
231 Ga0501080_0061565 3300049742 Bacteria 3494
232 Ga0501083_0001915 3300049744 Bacteria 14294
233 Ga0501283_000693 3300049779 Bacteria 4446
234 nmdc:mga05p37_220464_c1 3300050507 Unclassified 2289
235 nmdc:mga05p37_263127_c1 3300050507 Bacteria 2063
236 nmdc:mga08y16_77929_c1 3300050511 Bacteria 3455
237 nmdc:mga0n895_211773_c1 3300050512 Bacteria 1968
238 nmdc:mga0n895_58113_c1 3300050512 Bacteria 3813
239 nmdc:mga0a205_147154_c1 3300050515 Unclassified 2256
240 nmdc:mga0a205_187513_c1 3300050515 Bacteria 1961
241 nmdc:mga0a205_37449_c1 3300050515 Bacteria 4664
242 nmdc:mga0a205_52500_c1 3300050515 Bacteria 3934
243 Ga0495655_0000046 3300053083 Bacteria 25139
244 Ga0500616_0052147 3300053153 Bacteria 2152
245 Ga0105239_10391853
246 MBSR1b_contig_13907095
247 MBSR1b_contig_1699581
248 JGI24751J29686_10000007
249 JGI25406J46586_10039389
250 rootL2_10053850
251 Ga0065714_10064426
252 Ga0065712_10067732
253 Ga0065715_10096539
254 Ga0065715_10096758
255 Ga0065715_10209185
256 Ga0070676_10015394
257 Ga0070690_100002989
258 Ga0070690_100009615
259 Ga0070670_100000043
260 Ga0070670_100214847
261 Ga0068869_100029073
262 Ga0070666_10014233
263 Ga0070682_100040213
264 Ga0068868_100001551
265 Ga0070689_100001432
266 Ga0070689_100141385
267 Ga0070692_10009983
268 Ga0070692_10016700
269 Ga0070692_10042603
270 Ga0070692_10057938
271 Ga0070692_10076734
272 Ga0070668_100277812
273 Ga0070669_100000120
274 Ga0070669_100002916
275 Ga0070673_100003740
276 Ga0070688_100144790
277 Ga0070667_100225764
278 Ga0070703_10017875
279 Ga0070713_100030962
280 Ga0070705_100026003
281 Ga0070700_100001193
282 Ga0070694_100013955
283 Ga0070694_100015891
284 Ga0070708_100202367
285 Ga0068867_100032033
286 Ga0070706_100143281
287 Ga0070707_100073246
288 Ga0070698_100006295
289 Ga0070698_100037773
290 Ga0070699_100036626
291 Ga0070684_100101006
292 Ga0070697_100050823
293 Ga0070697_100074495
294 Ga0068853_100014208
295 Ga0070686_100025535
296 Ga0070696_100047231
297 Ga0070696_100068239
298 Ga0070693_100010388
299 Ga0070693_100046444
300 Ga0070693_100173539
301 Ga0068857_100011588
302 Ga0068857_100062898
303 Ga0070702_100009087
304 Ga0070702_100009689
305 Ga0070702_100028841
306 Ga0070702_100083445
307 Ga0068859_100001336
308 Ga0068859_100014105
309 Ga0068859_100116411
310 Ga0068859_100119230
311 Ga0068859_100155304
312 Ga0068864_100000039
313 Ga0068864_100010487
314 Ga0068864_100078058
315 Ga0068864_100143258
316 Ga0068866_10007749
317 Ga0068861_100028882
318 Ga0068851_10001248
319 Ga0068863_100021022
320 Ga0068863_100048175
321 Ga0068863_100128781
322 Ga0068858_100160801
323 Ga0068858_100161961
324 Ga0068858_100183882
325 Ga0068860_100032231
326 Ga0068860_100269715
327 Ga0068862_100003408
328 Ga0068862_100076131
329 Ga0068862_100092956
330 Ga0081539_10000605
331 Ga0081539_10000823
332 Ga0081539_10079534
333 Ga0070717_10000173
334 Ga0070716_100013830
335 Ga0097621_100010088
336 Ga0068871_100008067
337 Ga0068871_100290006
338 Ga0075428_100021145
339 Ga0075433_10005965
340 Ga0075433_10091344
341 Ga0075434_100057283
342 Ga0097620_100001336
343 Ga0097620_100014106
344 Ga0097620_100116409
345 Ga0097620_100119232
346 Ga0097620_100155289
347 Ga0075435_100004311
348 Ga0105240_10030120
349 Ga0105240_10133663
350 Ga0105240_10218586
351 Ga0105240_10305083
352 Ga0111539_10139456
353 Ga0105245_10053269
354 Ga0105247_10003721
355 Ga0105247_10093777
356 Ga0114129_10036160
357 Ga0114129_10332039
358 Ga0105243_10013684
359 Ga0105243_10036772
360 Ga0105243_10115108
361 Ga0105241_10053806
362 Ga0105241_10101275
363 Ga0105241_10345767
364 Ga0105242_10024542
365 Ga0105242_10086877
366 Ga0105248_10054441
367 Ga0105248_10416474
368 Ga0105237_10001054
369 Ga0105238_10002831
370 Ga0105249_10020231
371 Ga0105249_10193669
372 Ga0105246_10088300
373 Ga0157373_10014840
374 Ga0157373_10061026
375 Ga0157378_10016934
376 Ga0163162_10007868
377 Ga0157372_10007175
378 Ga0157375_10000018
379 Ga0157375_10007031
380 Ga0157375_10016654
381 Ga0163163_10000559
382 Ga0157380_10008300
383 Ga0157380_10066576
384 Ga0163161_10159860
385 Ga0207653_10002438
386 Ga0207710_10032315
387 Ga0207647_10001341
388 Ga0207645_10093396
389 Ga0207684_10000110
390 Ga0207695_10014828
391 Ga0207695_10056413
392 Ga0207695_10189210
393 Ga0207671_10028723
394 Ga0207662_10003829
395 Ga0207681_10000101
396 Ga0207681_10009059
397 Ga0207694_10008912
398 Ga0207650_10000009
399 Ga0207700_10015962
400 Ga0207706_10115518
401 Ga0207709_10005477
402 Ga0207709_10010521
403 Ga0207670_10000752
404 Ga0207670_10219446
405 Ga0207665_10064850
406 Ga0207689_10028238
407 Ga0207689_10104359
408 Ga0207689_10129489
409 Ga0207679_10076082
410 Ga0207651_10003359
411 Ga0207640_10092300
412 Ga0207677_10000011
413 Ga0207703_10045805
414 Ga0207703_10097291
415 Ga0207703_10196609
416 Ga0207639_10000045
417 Ga0207639_10197352
418 Ga0207708_10001953
419 Ga0207708_10016422
420 Ga0207708_10105194
421 Ga0207708_10121657
422 Ga0207641_10035855
423 Ga0207641_10097965
424 Ga0207648_10147424
425 Ga0207648_10267998
426 Ga0207676_10000008
427 Ga0207676_10072806
428 Ga0207674_10030260
429 Ga0207674_10037693
430 Ga0207674_10080118
431 Ga0207675_100021636
432 Ga0209970_1002445
433 Ga0209983_1001573
434 Ga0209971_1000565
435 Ga0209974_10000479
436 Ga0207428_10062860
437 Ga0268265_10000501
438 Ga0268265_10015134
439 Ga0268265_10047884
440 Ga0268265_10110169
441 Ga0268265_10121991
442 Ga0268264_10016643
443 Ga0268264_10140396
444 Ga0307408_100179690
445 Ga0307508_10006933
446 Ga0307405_10107763
447 Ga0307406_10002322
448 Ga0307406_10253111
449 Ga0307416_100027875
450 Ga0307414_10001349
451 Ga0373949_0010963
452 Ga0373961_0000663
453 Ga0373935_0056854
454 Ga0242419_000557
455 Ga0242420_000257
456 Ga0436365_0909810
457 Ga0451577_0137196
458 Ga0453683_0145065
459 Ga0496106_0016526
460 Ga0496107_0029673
461 Ga0496113_0092230
462 Ga0496114_0000024
463 Ga0501296_000571
464 Ga0501298_000707
465 Ga0501300_004258
466 Ga0501073_0006011
467 Ga0501202_005134
468 Ga0501206_002645
469 Ga0501216_003322
470 Ga0501217_000049
471 Ga0501227_000317
472 Ga0501242_003466
473 Ga0501243_002848
474 Ga0501225_0013120
475 Ga0501080_0061565
476 Ga0501083_0001915
477 Ga0501283_000693
478 nmdc:mga05p37_220464_c1
479 nmdc:mga05p37_263127_c1
480 nmdc:mga08y16_77929_c1
481 nmdc:mga0n895_211773_c1
482 nmdc:mga0n895_58113_c1
483 nmdc:mga0a205_147154_c1
484 nmdc:mga0a205_187513_c1
485 nmdc:mga0a205_37449_c1
486 nmdc:mga0a205_52500_c1
487 Ga0495655_0000046
488 Ga0500616_0052147

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

27

230

0.91

PF07690

MFS_1

Major Facilitator Superfamily

52

394

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8998 14 411
8ex5-assembly1.cif.gz_A human s1p transporter spns2 in an outward-facing open conformation (state 4) 0.8928 16 417
6lyy-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate azd3965 in the outward-open conformation. 0.8894 14 420
6lyy-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate azd3965 in the outward-open conformation. 0.8829 14 420
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8775 14 411
ID Description Score Start End Superfamily
af_A0A1L1SUI3_3_201_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9466 11 196 1.20.1250.20
af_P41036_15_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9428 16 196 1.20.1250.20
af_P25621_30_229_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.938 18 194 1.20.1250.20
af_A0A0R0F726_79_268_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9366 16 196 1.20.1250.20
af_A0A1D6L8U4_23_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9353 20 194 1.20.1250.20
ID Description Score Start End GO Terms
AF-C1F4J3-F1-model_v4 Transporter, major facilitator family 0.9388 17 419 GO:0016020
GO:0022857
AF-A0A3D0Q1N4-F1-model_v4 MFS transporter 0.9283 64 419 GO:0016020
GO:0022857
AF-C1F4J3-F1-model_v4 Transporter, major facilitator family 0.9252 17 419 GO:0016020
GO:0022857
AF-A0A7V4MG28-F1-model_v4 MFS transporter 0.9157 17 418 GO:0016020
GO:0022857
AF-A0A2M8FMB3-F1-model_v4 MFS transporter 0.9106 1 231 GO:0016020
GO:0022857

Map