F356473

General Info

Members Datasets Scaffolds Average Seq Length
244 166 243 344

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10008492|Ga0105242_100084928
Length 395
Sequence MILGAADRGKCCPNFNGGREKRAGCKSSILGSSVTIGLLRIEKANKMTIAEMYQAGPRVEVTSVLDNGIQTHAIESLPSSILSRDEELLDSYSRTVSQVVEKVAPAVVNIRVHQSGVDHHRGFIIAPDGFILTNSHVVHATDQIEVTLADGRTYPATAIGDDPDTDLAVIRIDAPNLSYARLGDSQSLRVGQIAIALGSPYGFQQTVTAGVVSALGRSMRAQSGRLMDNILQTDAALNPGNSGGPLVNSRGEVIGVNTAVILPAQGICFAIASNTAQFIAAWLIKEGRIRRSYIGIAGQDVPIHSRVVRFHRLPVSHGVLVTGVEPGSPAEGAQLREGDVVVAFKGDPIASIDQLHRRLMAREIGVTSALTIIHHTEKLDVWITPQEWHPAANRN

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
99 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
100 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
101 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
105 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
106 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
107 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
125 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
129 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
133 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
134 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 0
Rhizoplane 4.1
Rhizosphere 92.21
Stem 0
Stem Tuber 0
Unclassified 2.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10028956 3300003320 Bacteria 38622
2 rootL2_10038212 3300003322 Bacteria 3062
3 rootL2_10213377 3300003322 Bacteria 2702
4 Ga0070658_10000770 3300005327 Bacteria 27530
5 Ga0070658_10066843 3300005327 Bacteria 2937
6 Ga0070690_100142876 3300005330 Bacteria 1626
7 Ga0070670_100059074 3300005331 Bacteria 3292
8 Ga0070670_100221081 3300005331 Bacteria 1648
9 Ga0070677_10049873 3300005333 Bacteria 1688
10 Ga0068869_100066281 3300005334 Bacteria 2660
11 Ga0068868_100002647 3300005338 Bacteria 12429
12 Ga0070689_100073941 3300005340 Bacteria 2666
13 Ga0070689_100154228 3300005340 Bacteria 1854
14 Ga0070687_100001166 3300005343 Bacteria 9093
15 Ga0070668_100360714 3300005347 Bacteria 1232
16 Ga0070669_100004637 3300005353 Bacteria 9920
17 Ga0070675_100025108 3300005354 Bacteria 4775
18 Ga0070675_100202795 3300005354 Bacteria 1722
19 Ga0070673_100036143 3300005364 Bacteria 3752
20 Ga0070659_100005671 3300005366 Bacteria 8977
21 Ga0070667_100001295 3300005367 Bacteria 22619
22 Ga0070667_100056470 3300005367 Bacteria 3316
23 Ga0070709_10219333 3300005434 Bacteria 1356
24 Ga0070714_100021093 3300005435 Bacteria 5326
25 Ga0070701_10034267 3300005438 Bacteria 2542
26 Ga0070711_100078089 3300005439 Bacteria 2351
27 Ga0070711_100248232 3300005439 Bacteria 1395
28 Ga0070705_100054390 3300005440 Bacteria 2348
29 Ga0070700_100017262 3300005441 Bacteria 4123
30 Ga0070700_100045290 3300005441 Bacteria 2713
31 Ga0070708_100022417 3300005445 Bacteria 5357
32 Ga0070708_100060289 3300005445 Bacteria 3386
33 Ga0070708_100085586 3300005445 Bacteria 2862
34 Ga0070678_100006052 3300005456 Bacteria 7058
35 Ga0070662_100003977 3300005457 Bacteria 9262
36 Ga0070685_10028244 3300005466 Bacteria 3107
37 Ga0070706_100000361 3300005467 Bacteria 54785
38 Ga0070706_100007254 3300005467 Bacteria 10411
39 Ga0070706_100007433 3300005467 Bacteria 10275
40 Ga0070706_100010540 3300005467 Bacteria 8578
41 Ga0070706_100362099 3300005467 Bacteria 1351
42 Ga0070707_100004116 3300005468 Bacteria 13649
43 Ga0070707_100031755 3300005468 Bacteria 5031
44 Ga0070707_100248617 3300005468 Bacteria 1730
45 Ga0070699_100033679 3300005518 Bacteria 4426
46 Ga0070697_100019028 3300005536 Bacteria 5419
47 Ga0070697_100062419 3300005536 Bacteria 3041
48 Ga0070697_100069830 3300005536 Bacteria 2878
49 Ga0070697_100122693 3300005536 Bacteria 2174
50 Ga0070697_100157405 3300005536 Bacteria 1918
51 Ga0070704_100002390 3300005549 Bacteria 10533
52 Ga0068855_100017845 3300005563 Bacteria 8529
53 Ga0068852_100198433 3300005616 Bacteria 1898
54 Ga0068864_100004447 3300005618 Bacteria 11520
55 Ga0068864_100075698 3300005618 Bacteria 2940
56 Ga0068863_100005147 3300005841 Bacteria 12901
57 Ga0068858_100050318 3300005842 Bacteria 3857
58 Ga0068860_100134987 3300005843 Bacteria 2369
59 Ga0068860_100215647 3300005843 Bacteria 1862
60 Ga0068862_100006880 3300005844 Bacteria 9432
61 Ga0068862_100013099 3300005844 Bacteria 6858
62 Ga0068862_100112322 3300005844 Bacteria 2393
63 Ga0081539_10006003 3300005985 Bacteria 11933
64 Ga0070717_10184501 3300006028 Bacteria 1820
65 Ga0070717_10192503 3300006028 Bacteria 1782
66 Ga0070715_10041359 3300006163 Bacteria 1931
67 Ga0070715_10089287 3300006163 Bacteria 1414
68 Ga0070712_100015379 3300006175 Bacteria 4927
69 Ga0075366_10030526 3300006195 Bacteria 3169
70 Ga0075428_100024490 3300006844 Bacteria 6680
71 Ga0075431_100013678 3300006847 Bacteria 8202
72 Ga0111539_10157338 3300009094 Bacteria 2659
73 Ga0111539_10669028 3300009094 Bacteria 1209
74 Ga0105245_10049679 3300009098 Bacteria 3757
75 Ga0105243_10011127 3300009148 Bacteria 6806
76 Ga0105242_10008492 3300009176 Bacteria 7887
77 Ga0105237_10007295 3300009545 Bacteria 12121
78 Ga0157374_10000028 3300013296 Bacteria 213725
79 Ga0157374_10145793 3300013296 Bacteria 2299
80 Ga0157378_10104206 3300013297 Bacteria 2593
81 Ga0157372_10597187 3300013307 Unclassified 1287
82 Ga0157375_10175441 3300013308 Bacteria 2292
83 Ga0157375_10209789 3300013308 Bacteria 2105
84 Ga0163163_10000189 3300014325 Bacteria 63349
85 Ga0163163_10003340 3300014325 Bacteria 13617
86 Ga0157376_10000994 3300014969 Bacteria 18490
87 Ga0157376_10237741 3300014969 Bacteria 1696
88 Ga0157376_10355734 3300014969 Bacteria 1403
89 Ga0163161_10010219 3300017792 Bacteria 6499
90 Ga0207697_10000127 3300025315 Bacteria 36502
91 Ga0207653_10031500 3300025885 Bacteria 1713
92 Ga0207682_10049323 3300025893 Bacteria 1738
93 Ga0207642_10144723 3300025899 Bacteria 1258
94 Ga0207645_10000835 3300025907 Bacteria 25692
95 Ga0207645_10220138 3300025907 Bacteria 1251
96 Ga0207705_10022605 3300025909 Bacteria 4485
97 Ga0207705_10053248 3300025909 Bacteria 2915
98 Ga0207684_10000412 3300025910 Bacteria 57282
99 Ga0207684_10007452 3300025910 Bacteria 9846
100 Ga0207684_10020144 3300025910 Bacteria 5697
101 Ga0207684_10063243 3300025910 Bacteria 3142
102 Ga0207671_10068738 3300025914 Bacteria 2640
103 Ga0207693_10008686 3300025915 Bacteria 8310
104 Ga0207693_10028898 3300025915 Bacteria 4382
105 Ga0207663_10167374 3300025916 Bacteria 1558
106 Ga0207663_10287570 3300025916 Bacteria 1223
107 Ga0207662_10000287 3300025918 Bacteria 23320
108 Ga0207646_10092613 3300025922 Bacteria 2706
109 Ga0207646_10361366 3300025922 Bacteria 1312
110 Ga0207681_10003580 3300025923 Bacteria 9674
111 Ga0207694_10008246 3300025924 Bacteria 7876
112 Ga0207694_10158431 3300025924 Bacteria 1827
113 Ga0207650_10002097 3300025925 Bacteria 13941
114 Ga0207650_10084370 3300025925 Bacteria 2415
115 Ga0207700_10081534 3300025928 Bacteria 2526
116 Ga0207644_10075317 3300025931 Bacteria 2480
117 Ga0207706_10000921 3300025933 Bacteria 30112
118 Ga0207706_10139718 3300025933 Unclassified 2131
119 Ga0207709_10056578 3300025935 Bacteria 2428
120 Ga0207670_10055920 3300025936 Bacteria 2669
121 Ga0207670_10091258 3300025936 Bacteria 2154
122 Ga0207669_10256650 3300025937 Bacteria 1305
123 Ga0207665_10004240 3300025939 Bacteria 9538
124 Ga0207691_10031939 3300025940 Bacteria 4914
125 Ga0207689_10002760 3300025942 Bacteria 16241
126 Ga0207667_10005563 3300025949 Bacteria 15379
127 Ga0207651_10199655 3300025960 Viruses 1602
128 Ga0207668_10000957 3300025972 Bacteria 17416
129 Ga0207658_10003821 3300025986 Bacteria 10607
130 Ga0207658_10181619 3300025986 Bacteria 1742
131 Ga0207677_10037440 3300026023 Bacteria 3171
132 Ga0207703_10027293 3300026035 Bacteria 4497
133 Ga0207703_10043134 3300026035 Bacteria 3619
134 Ga0207708_10017572 3300026075 Bacteria 5384
135 Ga0207708_10115920 3300026075 Bacteria 2084
136 Ga0207641_10004960 3300026088 Bacteria 11415
137 Ga0207641_10083105 3300026088 Bacteria 2784
138 Ga0207648_10013706 3300026089 Bacteria 7525
139 Ga0207676_10003025 3300026095 Bacteria 11992
140 Ga0207676_10090953 3300026095 Bacteria 2506
141 Ga0207674_10099757 3300026116 Bacteria 2886
142 Ga0207675_100084177 3300026118 Bacteria 2984
143 Ga0207683_10009457 3300026121 Bacteria 8305
144 Ga0207683_10192345 3300026121 Bacteria 1853
145 Ga0207698_10164284 3300026142 Bacteria 1946
146 Ga0268265_10113764 3300028380 Bacteria 2215
147 Ga0265337_1005805 3300028556 Bacteria 4839
148 Ga0265323_10000120 3300028653 Bacteria 44582
149 Ga0265323_10002358 3300028653 Bacteria 8708
150 Ga0265322_10002265 3300028654 Bacteria 5959
151 Ga0265322_10025153 3300028654 Bacteria 1703
152 Ga0265336_10024118 3300028666 Bacteria 1924
153 Ga0307515_10148812 3300028794 Bacteria 2461
154 Ga0265338_10004813 3300028800 Bacteria 18044
155 Ga0265338_10005783 3300028800 Bacteria 15988
156 Ga0265338_10031563 3300028800 Bacteria 5191
157 Ga0265338_10049821 3300028800 Bacteria 3791
158 Ga0265338_10076508 3300028800 Bacteria 2834
159 Ga0265324_10011707 3300029957 Bacteria 3336
160 Ga0265332_10006742 3300031238 Bacteria 5204
161 Ga0265320_10045612 3300031240 Bacteria 2153
162 Ga0265329_10002461 3300031242 Bacteria 8358
163 Ga0265340_10007626 3300031247 Bacteria 5870
164 Ga0265340_10024744 3300031247 Bacteria 3047
165 Ga0265327_10001553 3300031251 Bacteria 28205
166 Ga0265327_10010744 3300031251 Bacteria 6390
167 Ga0265316_10041721 3300031344 Bacteria 3670
168 Ga0265316_10077669 3300031344 Bacteria 2549
169 Ga0307508_10000044 3300031616 Bacteria 143750
170 Ga0307410_10034832 3300031852 Bacteria 3265
171 Ga0307409_100014655 3300031995 Bacteria 5110
172 Ga0373954_0001125 3300035118 Bacteria 10723
173 Ga0373943_0062026 3300035170 Bacteria 1870
174 Ga0373935_0024654 3300035692 Bacteria 3704
175 Ga0373927_0002559 3300035695 Bacteria 13249
176 Ga0373925_0007483 3300037068 Bacteria 7967
177 Ga0373925_0014427 3300037068 Bacteria 5711
178 Ga0373925_0049553 3300037068 Bacteria 3131
179 Ga0373925_0150935 3300037068 Bacteria 1825
180 Ga0395905_0441921 3300037471 Bacteria 1198
181 Ga0436361_0829254 3300039447 Bacteria 2190
182 Ga0439464_0034095 3300042439 Bacteria 1435
183 Ga0453683_0007416 3300044673 Bacteria 7443
184 Ga0451576_0029415 3300045051 Bacteria 5879
185 Ga0451576_0035952 3300045051 Bacteria 5253
186 Ga0451576_0094934 3300045051 Bacteria 3102
187 Ga0495629_0154858 3300046459 Bacteria 1593
188 Ga0495641_0022900 3300046461 Bacteria 3116
189 Ga0495628_0108124 3300046516 Bacteria 2141
190 Ga0495630_0248973 3300046517 Unclassified 1357
191 Ga0495630_0286423 3300046517 Bacteria 1259
192 Ga0495643_0000125 3300046522 Bacteria 124041
193 Ga0495666_0082666 3300046526 Bacteria 1518
194 Ga0495586_0089661 3300046535 Bacteria 1698
195 Ga0495645_0062211 3300046543 Unclassified 2704
196 Ga0495622_0070330 3300046557 Bacteria 1615
197 Ga0495658_0026799 3300046683 Bacteria 3093
198 Ga0495613_0097546 3300046689 Bacteria 2124
199 Ga0495675_0069855 3300047444 Bacteria 2217
200 Ga0496104_0087771 3300048907 Bacteria 2971
201 Ga0496104_0093965 3300048907 Bacteria 2869
202 Ga0496108_0027860 3300048911 Bacteria 4671
203 Ga0496109_0229437 3300048912 Bacteria 1746
204 Ga0496110_0169628 3300048913 Bacteria 1980
205 Ga0496112_0035113 3300048915 Bacteria 4880
206 Ga0496112_0055321 3300048915 Bacteria 3901
207 Ga0496113_0083143 3300048916 Bacteria 2456
208 Ga0496113_0356167 3300048916 Bacteria 1174
209 Ga0496115_0140779 3300048918 Bacteria 1990
210 Ga0501031_0026728 3300049568 Bacteria 3762
211 Ga0501032_0000413 3300049569 Bacteria 35272
212 Ga0501032_0033384 3300049569 Bacteria 3526
213 Ga0501033_0002849 3300049570 Bacteria 14487
214 Ga0501033_0094783 3300049570 Bacteria 2182
215 Ga0501034_0034364 3300049571 Bacteria 5139
216 Ga0501036_0001736 3300049572 Bacteria 16930
217 Ga0501036_0371339 3300049572 Bacteria 1194
218 Ga0501037_0001302 3300049573 Bacteria 18358
219 Ga0501037_0040325 3300049573 Bacteria 3436
220 Ga0501037_0057517 3300049573 Bacteria 2839
221 Ga0501038_0000450 3300049574 Bacteria 35843
222 Ga0501038_0328057 3300049574 Bacteria 1196
223 Ga0501039_0009671 3300049575 Bacteria 7350
224 Ga0501042_0005940 3300049578 Bacteria 7899
225 Ga0501043_0003241 3300049579 Bacteria 13432
226 Ga0501043_0402930 3300049579 Bacteria 1033
227 Ga0501046_0002304 3300049580 Bacteria 17994
228 Ga0501046_0013757 3300049580 Bacteria 6840
229 Ga0501047_0049166 3300049581 Bacteria 4071
230 Ga0501047_0380276 3300049581 Bacteria 1246
231 Ga0501048_0001282 3300049582 Bacteria 19055
232 Ga0501068_0108440 3300049584 Bacteria 1725
233 Ga0501080_0007276 3300049742 Bacteria 9987
234 Ga0501083_0049140 3300049744 Bacteria 2845
235 Ga0501035_0001487 3300049822 Bacteria 24008
236 Ga0501035_0019797 3300049822 Bacteria 6183
237 Ga0501044_0038879 3300049823 Bacteria 4967
238 Ga0501045_0035860 3300049824 Bacteria 3602
239 nmdc:mga0k408_125577_c1 3300050493 Bacteria 1522
240 nmdc:mga09592_151248_c1 3300050508 Bacteria 2002
241 nmdc:mga0qj67_115629_c1 3300050509 Bacteria 2167
242 Ga0500555_000021 3300053103 Bacteria 172126
243 Ga0501082_0086999 3300060353 Bacteria 2696

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300017792 Ga0163161_10010219 Ga0163161_100102192 285
2 3300028654 Ga0265322_10025153 Ga0265322_100251532 303
3 3300031238 Ga0265332_10006742 Ga0265332_100067423 303
4 3300031242 Ga0265329_10002461 Ga0265329_100024614 303
5 3300048912 Ga0496109_0229437 Ga0496109_0229437_432_1385 304
6 3300031852 Ga0307410_10034832 Ga0307410_100348324 307
7 3300031995 Ga0307409_100014655 Ga0307409_1000146552 307
8 3300035118 Ga0373954_0001125 Ga0373954_0001125_8938_9894 308
9 3300049570 Ga0501033_0094783 Ga0501033_0094783_1144_2139 309
10 3300049572 Ga0501036_0371339 Ga0501036_0371339_168_1163 309
11 3300009094 Ga0111539_10157338 Ga0111539_101573383 310
12 iso_pu_bacteria 2786546940 2788434676 310
13 3300006844 Ga0075428_100024490 Ga0075428_1000244905 311
14 3300006847 Ga0075431_100013678 Ga0075431_1000136782 311
15 3300037471 Ga0395905_0441921 Ga0395905_0441921_171_1175 311
16 3300046517 Ga0495630_0286423 Ga0495630_0286423_259_1209 311
17 3300049579 Ga0501043_0402930 Ga0501043_0402930_23_1021 311
18 3300050509 nmdc:mga0qj67_115629_c1 nmdc:mga0qj67_115629_c1_648_1649 311
19 3300005333 Ga0070677_10049873 Ga0070677_100498732 312
20 3300005334 Ga0068869_100066281 Ga0068869_1000662812 312
21 3300005364 Ga0070673_100036143 Ga0070673_1000361434 312
22 3300005440 Ga0070705_100054390 Ga0070705_1000543901 312
23 3300005441 Ga0070700_100017262 Ga0070700_1000172624 312
24 3300005456 Ga0070678_100006052 Ga0070678_1000060527 312
25 3300005466 Ga0070685_10028244 Ga0070685_100282443 312
26 3300005843 Ga0068860_100215647 Ga0068860_1002156471 312
27 3300009148 Ga0105243_10011127 Ga0105243_100111275 312
28 3300014969 Ga0157376_10237741 Ga0157376_102377412 312
29 3300025893 Ga0207682_10049323 Ga0207682_100493232 312
30 3300025899 Ga0207642_10144723 Ga0207642_101447231 312
31 3300025935 Ga0207709_10056578 Ga0207709_100565782 312
32 3300025937 Ga0207669_10256650 Ga0207669_102566501 312
33 3300025940 Ga0207691_10031939 Ga0207691_100319393 312
34 3300025942 Ga0207689_10002760 Ga0207689_100027604 312
35 3300026075 Ga0207708_10017572 Ga0207708_100175723 312
36 3300026089 Ga0207648_10013706 Ga0207648_100137063 312
37 3300026121 Ga0207683_10009457 Ga0207683_100094577 312
38 3300042439 Ga0439464_0034095 Ga0439464_0034095_259_1320 312
39 3300025910 Ga0207684_10000412 Ga0207684_1000041234 313
40 3300025960 Ga0207651_10199655 Ga0207651_101996552 313
41 3300049581 Ga0501047_0380276 Ga0501047_0380276_65_1084 313
42 3300005327 Ga0070658_10066843 Ga0070658_100668433 314
43 3300005367 Ga0070667_100056470 Ga0070667_1000564703 314
44 3300025909 Ga0207705_10053248 Ga0207705_100532483 314
45 3300028653 Ga0265323_10002358 Ga0265323_100023585 314
46 3300028794 Ga0307515_10148812 Ga0307515_101488122 314
47 3300029957 Ga0265324_10011707 Ga0265324_100117072 314
48 3300031251 Ga0265327_10010744 Ga0265327_100107444 314
49 3300031616 Ga0307508_10000044 Ga0307508_1000004443 314
50 3300049568 Ga0501031_0026728 Ga0501031_0026728_2574_3545 314
51 3300049569 Ga0501032_0000413 Ga0501032_0000413_17511_18482 314
52 3300049570 Ga0501033_0002849 Ga0501033_0002849_10892_11863 314
53 3300049571 Ga0501034_0034364 Ga0501034_0034364_3176_4147 314
54 3300049572 Ga0501036_0001736 Ga0501036_0001736_10895_11866 314
55 3300049573 Ga0501037_0001302 Ga0501037_0001302_12977_13948 314
56 3300049573 Ga0501037_0040325 Ga0501037_0040325_2118_3125 314
57 3300049574 Ga0501038_0000450 Ga0501038_0000450_4137_5108 314
58 3300049574 Ga0501038_0328057 Ga0501038_0328057_153_1160 314
59 3300049575 Ga0501039_0009671 Ga0501039_0009671_1963_2934 314
60 3300049578 Ga0501042_0005940 Ga0501042_0005940_967_1938 314
61 3300049579 Ga0501043_0003241 Ga0501043_0003241_6060_7031 314
62 3300049580 Ga0501046_0002304 Ga0501046_0002304_11708_12715 314
63 3300049580 Ga0501046_0013757 Ga0501046_0013757_3245_4216 314
64 3300049581 Ga0501047_0049166 Ga0501047_0049166_2109_3080 314
65 3300049582 Ga0501048_0001282 Ga0501048_0001282_3250_4221 314
66 3300049584 Ga0501068_0108440 Ga0501068_0108440_525_1496 314
67 3300049744 Ga0501083_0049140 Ga0501083_0049140_117_1088 314
68 3300049822 Ga0501035_0001487 Ga0501035_0001487_6652_7623 314
69 3300049823 Ga0501044_0038879 Ga0501044_0038879_2204_3175 314
70 3300049824 Ga0501045_0035860 Ga0501045_0035860_489_1460 314
71 3300060353 Ga0501082_0086999 Ga0501082_0086999_110_1081 314
72 3300003322 rootL2_10213377 rootL2_102133771 315
73 3300005438 Ga0070701_10034267 Ga0070701_100342673 315
74 3300005549 Ga0070704_100002390 Ga0070704_1000023906 315
75 3300014325 Ga0163163_10000189 Ga0163163_1000018944 315
76 3300025936 Ga0207670_10091258 Ga0207670_100912582 315
77 3300031240 Ga0265320_10045612 Ga0265320_100456122 315
78 3300039447 Ga0436361_0829254 Ga0436361_0829254_749_1768 315
79 3300044673 Ga0453683_0007416 Ga0453683_0007416_4000_4980 315
80 3300045051 Ga0451576_0029415 Ga0451576_0029415_4560_5540 315
81 3300028800 Ga0265338_10005783 Ga0265338_100057839 316
82 3300006195 Ga0075366_10030526 Ga0075366_100305264 317
83 3300013308 Ga0157375_10209789 Ga0157375_102097892 317
84 3300048907 Ga0496104_0093965 Ga0496104_0093965_1233_2252 317
85 3300048911 Ga0496108_0027860 Ga0496108_0027860_2971_3990 317
86 3300048913 Ga0496110_0169628 Ga0496110_0169628_242_1261 317
87 3300048915 Ga0496112_0035113 Ga0496112_0035113_1746_2765 317
88 3300048916 Ga0496113_0083143 Ga0496113_0083143_419_1438 317
89 3300050493 nmdc:mga0k408_125577_c1 nmdc:mga0k408_125577_c1_239_1273 317
90 3300045051 Ga0451576_0094934 Ga0451576_0094934_1389_2396 318
91 3300047444 Ga0495675_0069855 Ga0495675_0069855_848_1849 318
92 3300050508 nmdc:mga09592_151248_c1 nmdc:mga09592_151248_c1_865_1923 318
93 3300005331 Ga0070670_100059074 Ga0070670_1000590741 319
94 3300005331 Ga0070670_100221081 Ga0070670_1002210811 319
95 3300005616 Ga0068852_100198433 Ga0068852_1001984332 319
96 3300005618 Ga0068864_100004447 Ga0068864_1000044472 319
97 3300005841 Ga0068863_100005147 Ga0068863_1000051472 319
98 3300005844 Ga0068862_100006880 Ga0068862_1000068804 319
99 3300014325 Ga0163163_10003340 Ga0163163_100033402 319
100 3300025925 Ga0207650_10002097 Ga0207650_100020973 319
101 3300025925 Ga0207650_10084370 Ga0207650_100843703 319
102 3300026088 Ga0207641_10004960 Ga0207641_100049609 319
103 3300026095 Ga0207676_10003025 Ga0207676_1000302514 319
104 3300028800 Ga0265338_10004813 Ga0265338_1000481311 319
105 3300005340 Ga0070689_100154228 Ga0070689_1001542282 320
106 3300005354 Ga0070675_100202795 Ga0070675_1002027952 320
107 3300013296 Ga0157374_10145793 Ga0157374_101457933 320
108 3300013297 Ga0157378_10104206 Ga0157378_101042063 320
109 3300014969 Ga0157376_10355734 Ga0157376_103557341 320
110 3300025907 Ga0207645_10220138 Ga0207645_102201381 320
111 3300025915 Ga0207693_10008686 Ga0207693_100086862 320
112 3300025931 Ga0207644_10075317 Ga0207644_100753172 320
113 3300025933 Ga0207706_10139718 Ga0207706_101397183 320
114 3300025936 Ga0207670_10055920 Ga0207670_100559202 320
115 3300025986 Ga0207658_10181619 Ga0207658_101816191 320
116 3300026088 Ga0207641_10083105 Ga0207641_100831053 320
117 3300026121 Ga0207683_10192345 Ga0207683_101923452 320
118 3300035170 Ga0373943_0062026 Ga0373943_0062026_720_1757 320
119 3300037068 Ga0373925_0049553 Ga0373925_0049553_495_1532 320
120 3300048915 Ga0496112_0055321 Ga0496112_0055321_163_1200 320
121 3300048916 Ga0496113_0356167 Ga0496113_0356167_74_1111 320
122 3300031247 Ga0265340_10024744 Ga0265340_100247444 321
123 3300046459 Ga0495629_0154858 Ga0495629_0154858_156_1181 321
124 3300046461 Ga0495641_0022900 Ga0495641_0022900_1646_2812 321
125 3300046526 Ga0495666_0082666 Ga0495666_0082666_222_1388 321
126 3300046535 Ga0495586_0089661 Ga0495586_0089661_139_1305 321
127 3300046683 Ga0495658_0026799 Ga0495658_0026799_122_1288 321
128 3300046689 Ga0495613_0097546 Ga0495613_0097546_713_1738 321
129 3300005347 Ga0070668_100360714 Ga0070668_1003607141 322
130 3300005441 Ga0070700_100045290 Ga0070700_1000452902 322
131 3300005445 Ga0070708_100085586 Ga0070708_1000855863 322
132 3300005467 Ga0070706_100007254 Ga0070706_1000072543 322
133 3300005468 Ga0070707_100248617 Ga0070707_1002486172 322
134 3300025910 Ga0207684_10020144 Ga0207684_100201442 322
135 3300025922 Ga0207646_10092613 Ga0207646_100926133 322
136 3300026075 Ga0207708_10115920 Ga0207708_101159202 322
137 3300048907 Ga0496104_0087771 Ga0496104_0087771_1511_2557 322
138 3300005467 Ga0070706_100007433 Ga0070706_10000743310 323
139 3300005844 Ga0068862_100112322 Ga0068862_1001123221 323
140 3300009176 Ga0105242_10008492 Ga0105242_100084928 323
141 3300025910 Ga0207684_10007452 Ga0207684_1000745210 323
142 3300053103 Ga0500555_000021 Ga0500555_000021_127137_128159 323
143 3300025924 Ga0207694_10158431 Ga0207694_101584312 324
144 3300005338 Ga0068868_100002647 Ga0068868_1000026476 325
145 3300005343 Ga0070687_100001166 Ga0070687_1000011663 325
146 3300005353 Ga0070669_100004637 Ga0070669_10000463710 325
147 3300005354 Ga0070675_100025108 Ga0070675_1000251083 325
148 3300005366 Ga0070659_100005671 Ga0070659_1000056717 325
149 3300005367 Ga0070667_100001295 Ga0070667_10000129517 325
150 3300005434 Ga0070709_10219333 Ga0070709_102193332 325
151 3300005435 Ga0070714_100021093 Ga0070714_1000210933 325
152 3300005439 Ga0070711_100078089 Ga0070711_1000780891 325
153 3300005439 Ga0070711_100248232 Ga0070711_1002482321 325
154 3300005445 Ga0070708_100022417 Ga0070708_1000224174 325
155 3300005445 Ga0070708_100060289 Ga0070708_1000602893 325
156 3300005457 Ga0070662_100003977 Ga0070662_1000039772 325
157 3300005467 Ga0070706_100000361 Ga0070706_10000036135 325
158 3300005467 Ga0070706_100010540 Ga0070706_1000105404 325
159 3300005467 Ga0070706_100362099 Ga0070706_1003620991 325
160 3300005468 Ga0070707_100004116 Ga0070707_1000041164 325
161 3300005468 Ga0070707_100031755 Ga0070707_1000317553 325
162 3300005518 Ga0070699_100033679 Ga0070699_1000336793 325
163 3300005536 Ga0070697_100019028 Ga0070697_1000190282 325
164 3300005536 Ga0070697_100062419 Ga0070697_1000624193 325
165 3300005536 Ga0070697_100069830 Ga0070697_1000698303 325
166 3300005536 Ga0070697_100122693 Ga0070697_1001226932 325
167 3300005536 Ga0070697_100157405 Ga0070697_1001574051 325
168 3300005618 Ga0068864_100075698 Ga0068864_1000756982 325
169 3300005843 Ga0068860_100134987 Ga0068860_1001349872 325
170 3300005844 Ga0068862_100013099 Ga0068862_1000130996 325
171 3300006028 Ga0070717_10184501 Ga0070717_101845012 325
172 3300006028 Ga0070717_10192503 Ga0070717_101925032 325
173 3300006163 Ga0070715_10041359 Ga0070715_100413592 325
174 3300006163 Ga0070715_10089287 Ga0070715_100892871 325
175 3300006175 Ga0070712_100015379 Ga0070712_1000153792 325
176 3300009098 Ga0105245_10049679 Ga0105245_100496795 325
177 3300013307 Ga0157372_10597187 Ga0157372_105971871 325
178 3300013308 Ga0157375_10175441 Ga0157375_101754412 325
179 3300025315 Ga0207697_10000127 Ga0207697_1000012722 325
180 3300025885 Ga0207653_10031500 Ga0207653_100315001 325
181 3300025907 Ga0207645_10000835 Ga0207645_1000083517 325
182 3300025910 Ga0207684_10063243 Ga0207684_100632432 325
183 3300025915 Ga0207693_10028898 Ga0207693_100288986 325
184 3300025916 Ga0207663_10287570 Ga0207663_102875701 325
185 3300025918 Ga0207662_10000287 Ga0207662_100002873 325
186 3300025923 Ga0207681_10003580 Ga0207681_1000358010 325
187 3300025928 Ga0207700_10081534 Ga0207700_100815342 325
188 3300025933 Ga0207706_10000921 Ga0207706_1000092114 325
189 3300025939 Ga0207665_10004240 Ga0207665_100042408 325
190 3300025972 Ga0207668_10000957 Ga0207668_1000095719 325
191 3300025986 Ga0207658_10003821 Ga0207658_100038218 325
192 3300026023 Ga0207677_10037440 Ga0207677_100374403 325
193 3300026118 Ga0207675_100084177 Ga0207675_1000841772 325
194 3300026142 Ga0207698_10164284 Ga0207698_101642842 325
195 3300028556 Ga0265337_1005805 Ga0265337_10058054 325
196 3300028800 Ga0265338_10049821 Ga0265338_100498212 325
197 3300028800 Ga0265338_10076508 Ga0265338_100765082 325
198 3300031247 Ga0265340_10007626 Ga0265340_100076263 325
199 3300035692 Ga0373935_0024654 Ga0373935_0024654_2203_3252 325
200 3300035695 Ga0373927_0002559 Ga0373927_0002559_9988_11037 325
201 3300037068 Ga0373925_0014427 Ga0373925_0014427_2737_3786 325
202 3300045051 Ga0451576_0035952 Ga0451576_0035952_490_1554 325
203 3300046516 Ga0495628_0108124 Ga0495628_0108124_565_1605 325
204 3300046517 Ga0495630_0248973 Ga0495630_0248973_123_1172 325
205 3300046522 Ga0495643_0000125 Ga0495643_0000125_89362_90393 325
206 3300046543 Ga0495645_0062211 Ga0495645_0062211_1395_2438 325
207 3300046557 Ga0495622_0070330 Ga0495622_0070330_252_1310 325
208 3300048918 Ga0496115_0140779 Ga0496115_0140779_721_1782 325
209 3300003322 rootL2_10038212 rootL2_100382124 326
210 3300028653 Ga0265323_10000120 Ga0265323_1000012028 326
211 3300028654 Ga0265322_10002265 Ga0265322_100022655 326
212 3300031344 Ga0265316_10041721 Ga0265316_100417213 326
213 3300037068 Ga0373925_0007483 Ga0373925_0007483_6364_7437 326
214 3300005327 Ga0070658_10000770 Ga0070658_1000077015 327
215 3300005330 Ga0070690_100142876 Ga0070690_1001428762 327
216 3300005340 Ga0070689_100073941 Ga0070689_1000739412 327
217 3300005985 Ga0081539_10006003 Ga0081539_100060039 327
218 3300009094 Ga0111539_10669028 Ga0111539_106690281 327
219 3300009545 Ga0105237_10007295 Ga0105237_1000729512 327
220 3300025909 Ga0207705_10022605 Ga0207705_100226054 327
221 3300025914 Ga0207671_10068738 Ga0207671_100687382 327
222 3300025916 Ga0207663_10167374 Ga0207663_101673741 327
223 3300025922 Ga0207646_10361366 Ga0207646_103613661 327
224 3300025924 Ga0207694_10008246 Ga0207694_100082465 327
225 3300026035 Ga0207703_10027293 Ga0207703_100272933 327
226 3300026095 Ga0207676_10090953 Ga0207676_100909532 327
227 3300026116 Ga0207674_10099757 Ga0207674_100997573 327
228 3300028380 Ga0268265_10113764 Ga0268265_101137642 327
229 3300028666 Ga0265336_10024118 Ga0265336_100241181 327
230 3300028800 Ga0265338_10031563 Ga0265338_100315634 327
231 3300031344 Ga0265316_10077669 Ga0265316_100776692 327
232 3300037068 Ga0373925_0150935 Ga0373925_0150935_333_1403 327
233 3300049569 Ga0501032_0033384 Ga0501032_0033384_1074_2144 327
234 3300049573 Ga0501037_0057517 Ga0501037_0057517_621_1691 327
235 3300049742 Ga0501080_0007276 Ga0501080_0007276_4537_5598 327
236 3300049822 Ga0501035_0019797 Ga0501035_0019797_4710_5780 327
237 3300005563 Ga0068855_100017845 Ga0068855_1000178453 328
238 3300005842 Ga0068858_100050318 Ga0068858_1000503183 328
239 3300025949 Ga0207667_10005563 Ga0207667_100055639 328
240 3300026035 Ga0207703_10043134 Ga0207703_100431343 328
241 3300013296 Ga0157374_10000028 Ga0157374_1000002866 330
242 3300014969 Ga0157376_10000994 Ga0157376_100009948 330
243 3300031251 Ga0265327_10001553 Ga0265327_1000155315 330
244 3300003320 rootH2_10028956 rootH2_1002895610 341

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

121

256

0.96

PF13180

PDZ_2

PDZ domain

293

384

0.9

PF00595

PDZ

PDZ domain

283

373

0.88

PF00089

Trypsin

Trypsin

96

282

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w70-assembly1.cif.gz_B crystal structure of the pdz-c domain fragment of kangiella koreensis rsep orthologue 0.9241 274 338
7w6z-assembly1.cif.gz_A crystal structure of kangiella koreensis rsep orthologue in complex with batimastat in space group p21 0.9186 274 338
3id3-assembly1.cif.gz_B crystal structure of rsep pdz2 i304a domain 0.913 272 341
2zpm-assembly1.cif.gz_A crystal structure analysis of pdz domain b 0.9104 272 338
4kfv-assembly1.cif.gz_A structural insight into golgi membrane stacking by grasp65 and grasp55 0.9035 270 338
ID Description Score Start End Superfamily
3wkmB02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.93 272 341 2.30.42.10
3stjA01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9279 48 125 2.40.10.10
af_Q75HK9_11_95_2.40.10.10 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9181 49 126 2.40.10.10
3gdvC03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.916 243 341 2.30.42.10
3id3B00 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.913 272 341 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A7V4YTH7-F1-model_v4 PDZ domain-containing protein 0.9524 238 341
AF-A0A2P6W8M2-F1-model_v4 Trypsin 0.9448 49 176 GO:0004252
GO:0006508
AF-A0A517MEP6-F1-model_v4 Aminopeptidase YwaD (EC 3.4.11.6) 0.9423 243 341 GO:0004177
GO:0006508
GO:0008235
AF-A0A7V4YTH7-F1-model_v4 PDZ domain-containing protein 0.9351 238 341
AF-A0A539DPP4-F1-model_v4 PDZ domain-containing protein 0.9348 243 338

Feature Viewer

pLDDT pTM Quality
77.8 0.7 High
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Predicted Structure (AlphaFold2)

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