F356445

General Info

Members Datasets Scaffolds Average Seq Length
244 135 488 571

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10114894|Ga0111539_101148942
Length 605
Sequence VALAAGGAADGVTMKGITGRFVLLIATAAVLPLLVYGSVSVKKSTEGTEQSVSLGNQAVAEQIAAQIKLYFDDSHRVLVSIAENLRGTQLEHWQQEEILRNHVLDFPEFREISVFDANGRLRVSSRVGSSTLGIPSGAETDNGADSRFYVAPPYIDADVLPTTTMAIRLVGGEEPGWIIAEISLEQLWRAVDRIKVGTHGYALLLDGGGNLIAHGNPDEKSRIATARELRAPGTEEEKTLAKAATEARKNNSSAAPLRFYNSRGKELLAVGAAIDNPSWTVIVEQPTDDAFLVSRQLQVQLFAAIGLALLGTVILGWVWGRSFIQRIFALTRVTRAIADGRMDERVALSGQDEIRQLGDAFNSMADRLLELQEEIRKQERQAMFGRIAAGLVHDLSHPIQNIGNSCKLIQKMFEDAEYRETFKRTVERELVIIKRVLDDLRNIARPIPLERFPVDLNRTVADAAEAMEQHAETAGLTLRTELTPETVFIEGDVFALGRVYRNLILNAIQATAPGGLIVIASEAHGDRVQVRIYDTGCGIPPERLGQIFEDFVTTKRRGLGLGLAISKKIVEQLGGTISVASEVGKGTTFVLDFPRTTARPMLVAG

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
94 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
95 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
119 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
120 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
121 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
131 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
132 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
133 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
134 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.69
Nodule 0
Rhizoplane 4.92
Rhizosphere 91.39
Stem 0
Stem Tuber 0
Unclassified 4.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10114894 3300009094 Bacteria 3157
2 JGI25406J46586_10000291 3300003203 Bacteria 22497
3 JGI25406J46586_10000816 3300003203 Bacteria 14613
4 Ga0065712_10083224 3300005290 Bacteria 2854
5 Ga0065715_10017453 3300005293 Bacteria 3234
6 Ga0065715_10097445 3300005293 Unclassified 3700
7 Ga0065707_10085666 3300005295 Bacteria 5983
8 Ga0070683_100017292 3300005329 Bacteria 6372
9 Ga0070683_100018512 3300005329 Bacteria 6171
10 Ga0070670_100001015 3300005331 Bacteria 22158
11 Ga0070670_100008305 3300005331 Bacteria 8846
12 Ga0068868_100049653 3300005338 Bacteria 3293
13 Ga0070669_100007346 3300005353 Bacteria 7901
14 Ga0070675_100078822 3300005354 Bacteria 2744
15 Ga0070675_100083325 3300005354 Bacteria 2669
16 Ga0070674_100025443 3300005356 Bacteria 3853
17 Ga0070674_100110327 3300005356 Bacteria 2019
18 Ga0070688_100014273 3300005365 Bacteria 4498
19 Ga0070667_100021294 3300005367 Bacteria 5386
20 Ga0070701_10005285 3300005438 Bacteria 5318
21 Ga0070705_100001383 3300005440 Bacteria 12899
22 Ga0070705_100003171 3300005440 Bacteria 8075
23 Ga0070700_100032447 3300005441 Bacteria 3138
24 Ga0070694_100001815 3300005444 Bacteria 12642
25 Ga0070694_100047456 3300005444 Unclassified 2887
26 Ga0070678_100067199 3300005456 Bacteria 2667
27 Ga0070681_10053029 3300005458 Bacteria 4042
28 Ga0070681_10054824 3300005458 Bacteria 3972
29 Ga0068867_100005343 3300005459 Bacteria 9074
30 Ga0070707_100168016 3300005468 Bacteria 2138
31 Ga0070698_100002047 3300005471 Bacteria 22406
32 Ga0070698_100003530 3300005471 Bacteria 17209
33 Ga0070699_100002695 3300005518 Bacteria 15865
34 Ga0070699_100011830 3300005518 Bacteria 7530
35 Ga0070699_100181406 3300005518 Bacteria 1868
36 Ga0070684_100000068 3300005535 Bacteria 65538
37 Ga0070684_100037676 3300005535 Bacteria 4150
38 Ga0070672_100032376 3300005543 Bacteria 3945
39 Ga0070672_100081686 3300005543 Bacteria 2591
40 Ga0070696_100000994 3300005546 Bacteria 18378
41 Ga0070696_100001831 3300005546 Bacteria 13958
42 Ga0070696_100095362 3300005546 Bacteria 2124
43 Ga0070704_100000764 3300005549 Bacteria 15840
44 Ga0070704_100048953 3300005549 Bacteria 2961
45 Ga0070704_100051143 3300005549 Bacteria 2908
46 Ga0070704_100085049 3300005549 Bacteria 2340
47 Ga0068855_100070443 3300005563 Bacteria 4068
48 Ga0070664_100000769 3300005564 Bacteria 24735
49 Ga0070664_100023537 3300005564 Bacteria 5089
50 Ga0070664_100072747 3300005564 Bacteria 2948
51 Ga0070664_100101026 3300005564 Bacteria 2508
52 Ga0068856_100119280 3300005614 Bacteria 2639
53 Ga0070702_100021856 3300005615 Bacteria 3374
54 Ga0068852_100125045 3300005616 Unclassified 2360
55 Ga0068859_100017729 3300005617 Bacteria 7158
56 Ga0068864_100016014 3300005618 Bacteria 6237
57 Ga0068861_100001039 3300005719 Bacteria 17029
58 Ga0068861_100102278 3300005719 Bacteria 2281
59 Ga0068870_10005221 3300005840 Bacteria 5652
60 Ga0068858_100091921 3300005842 Bacteria 2824
61 Ga0068860_100119071 3300005843 Bacteria 2528
62 Ga0068862_100005533 3300005844 Bacteria 10554
63 Ga0081539_10000093 3300005985 Bacteria 207314
64 Ga0081539_10000222 3300005985 Bacteria 133128
65 Ga0081539_10040149 3300005985 Bacteria 2751
66 Ga0075364_10007735 3300006051 Bacteria 6399
67 Ga0075362_10000473 3300006177 Bacteria 11679
68 Ga0075367_10004042 3300006178 Bacteria 7095
69 Ga0075366_10035428 3300006195 Bacteria 2942
70 Ga0075428_100000007 3300006844 Bacteria 273226
71 Ga0075428_100012443 3300006844 Bacteria 9462
72 Ga0075428_100017049 3300006844 Bacteria 8026
73 Ga0075428_100029364 3300006844 Bacteria 6083
74 Ga0075428_100063920 3300006844 Bacteria 4030
75 Ga0075428_100095441 3300006844 Bacteria 3242
76 Ga0075430_100005691 3300006846 Bacteria 10515
77 Ga0075430_100040469 3300006846 Bacteria 3945
78 Ga0075430_100101978 3300006846 Bacteria 2396
79 Ga0075431_100027457 3300006847 Bacteria 5840
80 Ga0075431_100030402 3300006847 Bacteria 5563
81 Ga0075433_10011622 3300006852 Bacteria 7090
82 Ga0075433_10114941 3300006852 Unclassified 2388
83 Ga0075433_10119823 3300006852 Bacteria 2336
84 Ga0075433_10127194 3300006852 Bacteria 2263
85 Ga0075434_100000452 3300006871 Bacteria 30586
86 Ga0075434_100002772 3300006871 Bacteria 15506
87 Ga0075434_100027256 3300006871 Bacteria 5607
88 Ga0075434_100031729 3300006871 Bacteria 5209
89 Ga0075434_100082242 3300006871 Bacteria 3217
90 Ga0075434_100227541 3300006871 Bacteria 1884
91 Ga0075429_100019698 3300006880 Bacteria 5849
92 Ga0075429_100020383 3300006880 Bacteria 5751
93 Ga0075429_100041049 3300006880 Bacteria 4029
94 Ga0097620_100017730 3300006931 Bacteria 7158
95 Ga0111539_10000209 3300009094 Bacteria 69503
96 Ga0111539_10003266 3300009094 Bacteria 21438
97 Ga0111539_10009116 3300009094 Bacteria 12553
98 Ga0111539_10015162 3300009094 Bacteria 9602
99 Ga0111539_10023622 3300009094 Bacteria 7555
100 Ga0114129_10000171 3300009147 Bacteria 70782
101 Ga0114129_10000309 3300009147 Bacteria 56974
102 Ga0114129_10001304 3300009147 Bacteria 33279
103 Ga0114129_10005556 3300009147 Bacteria 17834
104 Ga0114129_10013363 3300009147 Bacteria 11697
105 Ga0114129_10049146 3300009147 Bacteria 5928
106 Ga0114129_10091954 3300009147 Bacteria 4203
107 Ga0114129_10109049 3300009147 Bacteria 3821
108 Ga0114129_10112629 3300009147 Unclassified 3752
109 Ga0105243_10042353 3300009148 Bacteria 3565
110 Ga0105248_10017187 3300009177 Bacteria 7970
111 Ga0105249_10003894 3300009553 Bacteria 12898
112 Ga0157374_10022476 3300013296 Bacteria 5626
113 Ga0157377_10010139 3300014745 Bacteria 4649
114 Ga0207697_10001902 3300025315 Bacteria 11133
115 Ga0207642_10032497 3300025899 Bacteria 2198
116 Ga0207688_10003617 3300025901 Bacteria 8435
117 Ga0207643_10035924 3300025908 Bacteria 2780
118 Ga0207643_10039615 3300025908 Bacteria 2650
119 Ga0207657_10071956 3300025919 Bacteria 2926
120 Ga0207646_10032313 3300025922 Bacteria 4737
121 Ga0207681_10001241 3300025923 Bacteria 16443
122 Ga0207681_10005148 3300025923 Bacteria 8033
123 Ga0207650_10008685 3300025925 Bacteria 6939
124 Ga0207659_10033837 3300025926 Bacteria 3520
125 Ga0207659_10065333 3300025926 Bacteria 2636
126 Ga0207709_10056492 3300025935 Bacteria 2430
127 Ga0207711_10077842 3300025941 Bacteria 2892
128 Ga0207689_10085288 3300025942 Bacteria 2596
129 Ga0207661_10009560 3300025944 Bacteria 6960
130 Ga0207661_10046312 3300025944 Bacteria 3449
131 Ga0207679_10001011 3300025945 Bacteria 18004
132 Ga0207679_10034362 3300025945 Bacteria 3576
133 Ga0207651_10090824 3300025960 Unclassified 2234
134 Ga0207712_10019968 3300025961 Bacteria 4383
135 Ga0207712_10046933 3300025961 Bacteria 2997
136 Ga0207658_10023302 3300025986 Bacteria 4321
137 Ga0207639_10136158 3300026041 Bacteria 2040
138 Ga0207708_10004019 3300026075 Bacteria 10820
139 Ga0207702_10079047 3300026078 Bacteria 2849
140 Ga0207648_10000709 3300026089 Bacteria 37371
141 Ga0207674_10040287 3300026116 Bacteria 4840
142 Ga0207674_10051472 3300026116 Bacteria 4203
143 Ga0207674_10052629 3300026116 Bacteria 4152
144 Ga0207675_100011431 3300026118 Bacteria 8305
145 Ga0207675_100034935 3300026118 Bacteria 4687
146 Ga0207428_10000022 3300027907 Bacteria 273333
147 Ga0207428_10004134 3300027907 Bacteria 13914
148 Ga0207428_10017159 3300027907 Bacteria 6221
149 Ga0268264_10015786 3300028381 Bacteria 6183
150 Ga0268264_10103375 3300028381 Bacteria 2481
151 Ga0307408_100003509 3300031548 Bacteria 10678
152 Ga0307408_100014610 3300031548 Bacteria 5217
153 Ga0307408_100016346 3300031548 Bacteria 4952
154 Ga0307408_100020634 3300031548 Bacteria 4450
155 Ga0307408_100138966 3300031548 Bacteria 1905
156 Ga0307409_100013510 3300031995 Bacteria 5259
157 Ga0307409_100083617 3300031995 Bacteria 2589
158 Ga0307416_100007635 3300032002 Bacteria 6901
159 Ga0307416_100016661 3300032002 Bacteria 5117
160 Ga0307415_100055704 3300032126 Unclassified 2707
161 Ga0373931_0028272 3300035691 Bacteria 2869
162 Ga0373933_0011138 3300035724 Bacteria 4947
163 Ga0373937_0012593 3300036401 Bacteria 7443
164 Ga0373937_0094932 3300036401 Bacteria 2765
165 Ga0373925_0012310 3300037068 Bacteria 6192
166 Ga0451577_0020445 3300042876 Bacteria 6076
167 Ga0451576_0074932 3300045051 Bacteria 3521
168 Ga0451576_0088183 3300045051 Bacteria 3227
169 Ga0451576_0104747 3300045051 Unclassified 2943
170 Ga0495659_0003148 3300046664 Bacteria 5294
171 Ga0495659_0025530 3300046664 Bacteria 2023
172 Ga0495588_0070843 3300046674 Bacteria 1812
173 Ga0495669_0046593 3300046684 Bacteria 1935
174 Ga0496100_0106377 3300048903 Bacteria 1942
175 Ga0496102_0135808 3300048905 Bacteria 2304
176 Ga0496104_0002672 3300048907 Bacteria 15343
177 Ga0496106_0054762 3300048909 Bacteria 3014
178 Ga0496108_0001535 3300048911 Bacteria 18278
179 Ga0496109_0001973 3300048912 Bacteria 17008
180 Ga0496109_0059339 3300048912 Bacteria 3495
181 Ga0496110_0002416 3300048913 Bacteria 13982
182 Ga0496110_0033160 3300048913 Bacteria 4465
183 Ga0496111_0002273 3300048914 Bacteria 11543
184 Ga0496112_0000287 3300048915 Bacteria 32756
185 Ga0496112_0065316 3300048915 Bacteria 3591
186 Ga0501299_000751 3300049522 Bacteria 3936
187 Ga0501040_0060575 3300049576 Bacteria 2601
188 Ga0501041_0007311 3300049577 Bacteria 6482
189 Ga0501046_0075950 3300049580 Bacteria 2604
190 Ga0501046_0110967 3300049580 Bacteria 2095
191 Ga0501048_0034051 3300049582 Bacteria 3678
192 Ga0501071_0008451 3300049587 Bacteria 6807
193 Ga0501071_0074393 3300049587 Bacteria 2479
194 Ga0501072_0019328 3300049588 Bacteria 5264
195 Ga0501075_0018161 3300049591 Bacteria 5087
196 Ga0501075_0041112 3300049591 Bacteria 3464
197 Ga0501076_0009309 3300049592 Bacteria 7249
198 Ga0501079_0093878 3300049741 Bacteria 2325
199 Ga0501080_0148674 3300049742 Bacteria 2166
200 Ga0501081_0019042 3300049743 Bacteria 4566
201 Ga0501081_0059362 3300049743 Bacteria 2648
202 Ga0501045_0095555 3300049824 Bacteria 2198
203 nmdc:mga03683_367_c1 3300050489 Bacteria 13025
204 nmdc:mga00v17_4639_c1 3300050491 Bacteria 7169
205 nmdc:mga0k408_3204_c1 3300050493 Bacteria 8665
206 nmdc:mga0k408_3430_c1 3300050493 Bacteria 8393
207 nmdc:mga06z11_11704_c1 3300050494 Bacteria 3791
208 nmdc:mga05p37_10180_c1 3300050507 Bacteria 11162
209 nmdc:mga05p37_11998_c1 3300050507 Bacteria 10340
210 nmdc:mga05p37_12777_c1 3300050507 Bacteria 10035
211 nmdc:mga05p37_236871_c1 3300050507 Bacteria 2196
212 nmdc:mga05p37_37949_c1 3300050507 Bacteria 5909
213 nmdc:mga05p37_66097_c1 3300050507 Bacteria 4448
214 nmdc:mga05p37_8262_c1 3300050507 Bacteria 12307
215 nmdc:mga09592_12592_c1 3300050508 Bacteria 6893
216 nmdc:mga09592_36300_c1 3300050508 Bacteria 4127
217 nmdc:mga09592_6998_c1 3300050508 Bacteria 5202
218 nmdc:mga0qj67_115093_c1 3300050509 Bacteria 2173
219 nmdc:mga0qj67_15646_c1 3300050509 Bacteria 5746
220 nmdc:mga0qj67_19078_c1 3300050509 Bacteria 5236
221 nmdc:mga06r32_178002_c1 3300050510 Bacteria 2112
222 nmdc:mga06r32_23476_c1 3300050510 Bacteria 5706
223 nmdc:mga06r32_3672_c1 3300050510 Bacteria 13707
224 nmdc:mga06r32_65221_c1 3300050510 Bacteria 3512
225 nmdc:mga06r32_67637_c1 3300050510 Unclassified 3450
226 nmdc:mga08y16_21_c1 3300050511 Bacteria 254790
227 nmdc:mga08y16_25821_c1 3300050511 Bacteria 6199
228 nmdc:mga0n895_1998_c1 3300050512 Bacteria 15656
229 nmdc:mga0n895_20182_c1 3300050512 Bacteria 6210
230 nmdc:mga0n895_25544_c1 3300050512 Bacteria 5582
231 nmdc:mga0n895_8463_c1 3300050512 Bacteria 8907
232 nmdc:mga0rr50_16473_c1 3300050513 Bacteria 4911
233 nmdc:mga0rr50_59730_c1 3300050513 Bacteria 2864
234 nmdc:mga0a205_31951_c1 3300050515 Bacteria 5046
235 nmdc:mga0a205_58365_c1 3300050515 Bacteria 3727
236 Ga0501084_0099310 3300054114 Bacteria 2444
237 Ga0590071_000138 3300059421 Bacteria 20646
238 Ga0590071_000395 3300059421 Bacteria 12856
239 Ga0590074_000107 3300059423 Bacteria 9458
240 Ga0590075_000140 3300059424 Bacteria 19060
241 Ga0590075_005481 3300059424 Unclassified 2996
242 Ga0590077_001845 3300059426 Bacteria 4708
243 Ga0590077_002406 3300059426 Unclassified 4017
244 Ga0530510_0003610 3300061734 Bacteria 10654
245 Ga0111539_10114894
246 JGI25406J46586_10000291
247 JGI25406J46586_10000816
248 Ga0065712_10083224
249 Ga0065715_10017453
250 Ga0065715_10097445
251 Ga0065707_10085666
252 Ga0070683_100017292
253 Ga0070683_100018512
254 Ga0070670_100001015
255 Ga0070670_100008305
256 Ga0068868_100049653
257 Ga0070669_100007346
258 Ga0070675_100078822
259 Ga0070675_100083325
260 Ga0070674_100025443
261 Ga0070674_100110327
262 Ga0070688_100014273
263 Ga0070667_100021294
264 Ga0070701_10005285
265 Ga0070705_100001383
266 Ga0070705_100003171
267 Ga0070700_100032447
268 Ga0070694_100001815
269 Ga0070694_100047456
270 Ga0070678_100067199
271 Ga0070681_10053029
272 Ga0070681_10054824
273 Ga0068867_100005343
274 Ga0070707_100168016
275 Ga0070698_100002047
276 Ga0070698_100003530
277 Ga0070699_100002695
278 Ga0070699_100011830
279 Ga0070699_100181406
280 Ga0070684_100000068
281 Ga0070684_100037676
282 Ga0070672_100032376
283 Ga0070672_100081686
284 Ga0070696_100000994
285 Ga0070696_100001831
286 Ga0070696_100095362
287 Ga0070704_100000764
288 Ga0070704_100048953
289 Ga0070704_100051143
290 Ga0070704_100085049
291 Ga0068855_100070443
292 Ga0070664_100000769
293 Ga0070664_100023537
294 Ga0070664_100072747
295 Ga0070664_100101026
296 Ga0068856_100119280
297 Ga0070702_100021856
298 Ga0068852_100125045
299 Ga0068859_100017729
300 Ga0068864_100016014
301 Ga0068861_100001039
302 Ga0068861_100102278
303 Ga0068870_10005221
304 Ga0068858_100091921
305 Ga0068860_100119071
306 Ga0068862_100005533
307 Ga0081539_10000093
308 Ga0081539_10000222
309 Ga0081539_10040149
310 Ga0075364_10007735
311 Ga0075362_10000473
312 Ga0075367_10004042
313 Ga0075366_10035428
314 Ga0075428_100000007
315 Ga0075428_100012443
316 Ga0075428_100017049
317 Ga0075428_100029364
318 Ga0075428_100063920
319 Ga0075428_100095441
320 Ga0075430_100005691
321 Ga0075430_100040469
322 Ga0075430_100101978
323 Ga0075431_100027457
324 Ga0075431_100030402
325 Ga0075433_10011622
326 Ga0075433_10114941
327 Ga0075433_10119823
328 Ga0075433_10127194
329 Ga0075434_100000452
330 Ga0075434_100002772
331 Ga0075434_100027256
332 Ga0075434_100031729
333 Ga0075434_100082242
334 Ga0075434_100227541
335 Ga0075429_100019698
336 Ga0075429_100020383
337 Ga0075429_100041049
338 Ga0097620_100017730
339 Ga0111539_10000209
340 Ga0111539_10003266
341 Ga0111539_10009116
342 Ga0111539_10015162
343 Ga0111539_10023622
344 Ga0114129_10000171
345 Ga0114129_10000309
346 Ga0114129_10001304
347 Ga0114129_10005556
348 Ga0114129_10013363
349 Ga0114129_10049146
350 Ga0114129_10091954
351 Ga0114129_10109049
352 Ga0114129_10112629
353 Ga0105243_10042353
354 Ga0105248_10017187
355 Ga0105249_10003894
356 Ga0157374_10022476
357 Ga0157377_10010139
358 Ga0207697_10001902
359 Ga0207642_10032497
360 Ga0207688_10003617
361 Ga0207643_10035924
362 Ga0207643_10039615
363 Ga0207657_10071956
364 Ga0207646_10032313
365 Ga0207681_10001241
366 Ga0207681_10005148
367 Ga0207650_10008685
368 Ga0207659_10033837
369 Ga0207659_10065333
370 Ga0207709_10056492
371 Ga0207711_10077842
372 Ga0207689_10085288
373 Ga0207661_10009560
374 Ga0207661_10046312
375 Ga0207679_10001011
376 Ga0207679_10034362
377 Ga0207651_10090824
378 Ga0207712_10019968
379 Ga0207712_10046933
380 Ga0207658_10023302
381 Ga0207639_10136158
382 Ga0207708_10004019
383 Ga0207702_10079047
384 Ga0207648_10000709
385 Ga0207674_10040287
386 Ga0207674_10051472
387 Ga0207674_10052629
388 Ga0207675_100011431
389 Ga0207675_100034935
390 Ga0207428_10000022
391 Ga0207428_10004134
392 Ga0207428_10017159
393 Ga0268264_10015786
394 Ga0268264_10103375
395 Ga0307408_100003509
396 Ga0307408_100014610
397 Ga0307408_100016346
398 Ga0307408_100020634
399 Ga0307408_100138966
400 Ga0307409_100013510
401 Ga0307409_100083617
402 Ga0307416_100007635
403 Ga0307416_100016661
404 Ga0307415_100055704
405 Ga0373931_0028272
406 Ga0373933_0011138
407 Ga0373937_0012593
408 Ga0373937_0094932
409 Ga0373925_0012310
410 Ga0451577_0020445
411 Ga0451576_0074932
412 Ga0451576_0088183
413 Ga0451576_0104747
414 Ga0495659_0003148
415 Ga0495659_0025530
416 Ga0495588_0070843
417 Ga0495669_0046593
418 Ga0496100_0106377
419 Ga0496102_0135808
420 Ga0496104_0002672
421 Ga0496106_0054762
422 Ga0496108_0001535
423 Ga0496109_0001973
424 Ga0496109_0059339
425 Ga0496110_0002416
426 Ga0496110_0033160
427 Ga0496111_0002273
428 Ga0496112_0000287
429 Ga0496112_0065316
430 Ga0501299_000751
431 Ga0501040_0060575
432 Ga0501041_0007311
433 Ga0501046_0075950
434 Ga0501046_0110967
435 Ga0501048_0034051
436 Ga0501071_0008451
437 Ga0501071_0074393
438 Ga0501072_0019328
439 Ga0501075_0018161
440 Ga0501075_0041112
441 Ga0501076_0009309
442 Ga0501079_0093878
443 Ga0501080_0148674
444 Ga0501081_0019042
445 Ga0501081_0059362
446 Ga0501045_0095555
447 nmdc:mga03683_367_c1
448 nmdc:mga00v17_4639_c1
449 nmdc:mga0k408_3204_c1
450 nmdc:mga0k408_3430_c1
451 nmdc:mga06z11_11704_c1
452 nmdc:mga05p37_10180_c1
453 nmdc:mga05p37_11998_c1
454 nmdc:mga05p37_12777_c1
455 nmdc:mga05p37_236871_c1
456 nmdc:mga05p37_37949_c1
457 nmdc:mga05p37_66097_c1
458 nmdc:mga05p37_8262_c1
459 nmdc:mga09592_12592_c1
460 nmdc:mga09592_36300_c1
461 nmdc:mga09592_6998_c1
462 nmdc:mga0qj67_115093_c1
463 nmdc:mga0qj67_15646_c1
464 nmdc:mga0qj67_19078_c1
465 nmdc:mga06r32_178002_c1
466 nmdc:mga06r32_23476_c1
467 nmdc:mga06r32_3672_c1
468 nmdc:mga06r32_65221_c1
469 nmdc:mga06r32_67637_c1
470 nmdc:mga08y16_21_c1
471 nmdc:mga08y16_25821_c1
472 nmdc:mga0n895_1998_c1
473 nmdc:mga0n895_20182_c1
474 nmdc:mga0n895_25544_c1
475 nmdc:mga0n895_8463_c1
476 nmdc:mga0rr50_16473_c1
477 nmdc:mga0rr50_59730_c1
478 nmdc:mga0a205_31951_c1
479 nmdc:mga0a205_58365_c1
480 Ga0501084_0099310
481 Ga0590071_000138
482 Ga0590071_000395
483 Ga0590074_000107
484 Ga0590075_000140
485 Ga0590075_005481
486 Ga0590077_001845
487 Ga0590077_002406
488 Ga0530510_0003610

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00672

HAMP

HAMP domain

320

370

0.96

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

491

597

0.94

PF02743

dCache_1

Cache domain

48

284

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dx0-assembly2.cif.gz_B vansc ca domain 0.9174 429 572
3sl2-assembly1.cif.gz_A atp forms a stable complex with the essential histidine kinase walk (yycg) domain 0.9151 428 573
8h70-assembly1.cif.gz_A crystal structure of the catalytic atp-binding domain of the phor sensor histidine kinase from vibrio cholera 0.9097 429 571
3sl2-assembly1.cif.gz_A atp forms a stable complex with the essential histidine kinase walk (yycg) domain 0.9091 428 573
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.9089 426 572
ID Description Score Start End Superfamily
af_Q2FXN7_398_551_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9499 427 572 3.30.565.10
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9405 425 570 3.30.565.10
af_P9WGK5_228_381_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9283 427 574 3.30.565.10
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9279 425 570 3.30.565.10
af_Q9KJN3_301_451_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9261 426 569 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A352UJY2-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9451 452 573 GO:0000155
GO:0005886
GO:0009927
AF-A0A7W1AM36-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.931 450 576 GO:0000155
AF-X1J041-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9308 422 575 GO:0000155
GO:0005886
GO:0009927
AF-A0A7V0S1H7-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9307 474 573 GO:0016772
AF-A0A158DRZ5-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9282 405 575 GO:0000155

Map