F356333

General Info

Members Datasets Scaffolds Average Seq Length
244 185 219 260

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100219488|Ga0068856_1002194882
Length 299
Sequence MAARQLRVPDSVCSVPGTVRSVDLEIASGRGVTVLQSRAMSAWNDEQYLKFGDERTRPAQELLNRVPLGAAERVVDLGCGPGNSTALLAARFPAARVTGVDNSPEMLARARRDLPSVTWVEADVASYRADGLVDLLFANAVLHWLPEHDRLLPALLAQVRPGGVLAVQMPRNFAEPSHMLMRDTTPDATTSIVGWSERLRGVRALTPVAAPEVYYDLLAPHATHVDLWQTNYQHVMPDAAAIVEWVKGTGLRPYLDAIPEAERAHYLERYTAGIERAYPPRADGRRLFNFPRLFLVAVR

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
4 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
5 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
6 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
7 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
8 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
9 2643221607 Rhizobium sp. Root73 Isolate Unclassified
10 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
11 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
12 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
13 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
14 2643221718 Rhizobium sp. Root268 Isolate Unclassified
15 2643221723 Ensifer sp. Root278 Isolate Unclassified
16 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
17 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
18 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
19 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
20 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
21 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
22 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
23 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
24 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
28 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
29 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
30 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
31 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
34 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
37 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
38 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
39 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
40 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
41 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
42 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
43 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
44 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
45 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
46 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
47 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
48 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
55 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
58 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
59 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
81 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
82 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
83 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
90 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
111 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
112 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
123 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
124 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
127 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
128 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
129 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
136 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
137 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
138 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
141 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
142 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
143 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
180 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
181 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 639633007 Azoarcus olearius BH72 Isolate Unclassified
185 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.75
Metatranscriptomes 0
Isolates 10.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.2
Nodule 6.15
Rhizoplane 3.69
Rhizosphere 73.36
Stem 0
Stem Tuber 0
Unclassified 8.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1001337 3300002739 Bacteria 4356
2 JGI25151J46595_10001965 3300003187 Bacteria 12955
3 JGI25153J46596_10011972 3300003215 Bacteria 3792
4 rootH2_10234541 3300003320 Bacteria 1167
5 rootH1_10038156 3300003323 Bacteria 6713
6 Ga0055524_1000079 3300003775 Bacteria 120203
7 Ga0055524_1000777 3300003775 Bacteria 21429
8 Ga0055530_10003164 3300003791 Bacteria 9672
9 Ga0055540_1000004 3300003792 Bacteria 395545
10 Ga0055531_10035916 3300003794 Bacteria 1540
11 Ga0070658_10089738 3300005327 Bacteria 2531
12 Ga0070683_100000006 3300005329 Bacteria 361071
13 Ga0070670_100578368 3300005331 Unclassified 1004
14 Ga0070680_100053370 3300005336 Bacteria 3300
15 Ga0070680_100068744 3300005336 Bacteria 2907
16 Ga0070680_100092267 3300005336 Bacteria 2507
17 Ga0070680_100218158 3300005336 Bacteria 1610
18 Ga0070660_100160970 3300005339 Bacteria 1809
19 Ga0070668_100312712 3300005347 Bacteria 1320
20 Ga0070659_100157677 3300005366 Bacteria 1854
21 Ga0070713_100018366 3300005436 Bacteria 5315
22 Ga0070711_100555799 3300005439 Bacteria 953
23 Ga0070705_100408480 3300005440 Bacteria 1007
24 Ga0070681_10010115 3300005458 Bacteria 9299
25 Ga0070681_10017096 3300005458 Bacteria 7249
26 Ga0070681_10221104 3300005458 Bacteria 1809
27 Ga0070707_100001640 3300005468 Bacteria 21720
28 Ga0070698_100313081 3300005471 Bacteria 1500
29 Ga0070679_100035679 3300005530 Bacteria 4933
30 Ga0070679_100107630 3300005530 Bacteria 2774
31 Ga0070684_100000018 3300005535 Bacteria 136597
32 Ga0070697_100050017 3300005536 Unclassified 3392
33 Ga0068855_100064797 3300005563 Bacteria 4261
34 Ga0068855_100760593 3300005563 Unclassified 1032
35 Ga0068856_100000405 3300005614 Bacteria 47341
36 Ga0068856_100066001 3300005614 Bacteria 3576
37 Ga0068856_100070803 3300005614 Bacteria 3451
38 Ga0068856_100182346 3300005614 Bacteria 2113
39 Ga0068856_100219488 3300005614 Bacteria 1917
40 Ga0068852_100083635 3300005616 Bacteria 2838
41 Ga0068861_100004019 3300005719 Bacteria 9848
42 Ga0068863_100181569 3300005841 Bacteria 2020
43 Ga0068863_100332856 3300005841 Bacteria 1476
44 Ga0081538_10030634 3300005981 Bacteria 3647
45 Ga0081540_1027305 3300005983 Bacteria 3238
46 Ga0081539_10214244 3300005985 Bacteria 880
47 Ga0070717_10020390 3300006028 Bacteria 5213
48 Ga0075430_100022130 3300006846 Bacteria 5404
49 Ga0075430_100022243 3300006846 Bacteria 5393
50 Ga0075431_100000797 3300006847 Bacteria 27524
51 Ga0075431_100024002 3300006847 Bacteria 6244
52 Ga0075431_100058230 3300006847 Bacteria 3986
53 Ga0075431_100803058 3300006847 Unclassified 914
54 Ga0075429_100009202 3300006880 Bacteria 8577
55 Ga0079104_1000100 3300006946 Bacteria 126924
56 Ga0079104_1014594 3300006946 Bacteria 2364
57 Ga0075435_100195489 3300007076 Bacteria 1713
58 Ga0099794_10092022 3300007265 Bacteria 1506
59 Ga0105240_10002249 3300009093 Bacteria 31352
60 Ga0105240_10039909 3300009093 Bacteria 6008
61 Ga0105240_10070524 3300009093 Bacteria 4323
62 Ga0105240_10208004 3300009093 Bacteria 2288
63 Ga0114129_10012822 3300009147 Bacteria 11929
64 Ga0114129_10046885 3300009147 Bacteria 6074
65 Ga0114129_10368926 3300009147 Bacteria 1898
66 Ga0105248_10090931 3300009177 Bacteria 3437
67 Ga0105248_10302497 3300009177 Bacteria 1801
68 Ga0105237_10006483 3300009545 Bacteria 12971
69 Ga0105237_10074918 3300009545 Bacteria 3376
70 Ga0105238_10019445 3300009551 Bacteria 6916
71 Ga0105249_10022219 3300009553 Bacteria 5681
72 Ga0105033_101357 3300009986 Bacteria 1989
73 Ga0157370_10059336 3300013104 Bacteria 3635
74 Ga0157369_10136203 3300013105 Bacteria 2600
75 Ga0157369_10137614 3300013105 Bacteria 2585
76 Ga0171463_1001 3300013249 Bacteria 1406070
77 Ga0163162_10781450 3300013306 Unclassified 1073
78 Ga0157372_10142547 3300013307 Bacteria 2762
79 Ga0157372_10550640 3300013307 Bacteria 1345
80 Ga0157375_10149380 3300013308 Bacteria 2470
81 Ga0163163_10000443 3300014325 Bacteria 37875
82 Ga0157376_10523752 3300014969 Bacteria 1169
83 Ga0163161_10304394 3300017792 Bacteria 1256
84 Ga0214543_1000003 3300021327 Bacteria 692327
85 Ga0228711_1000001 3300022739 Bacteria 357377
86 Ga0228710_1000001 3300022740 Bacteria 314328
87 Ga0209130_1001202 3300025284 Bacteria 18410
88 Ga0209675_1014978 3300025291 Bacteria 2328
89 Ga0209025_1000514 3300025294 Bacteria 73822
90 Ga0209758_1001641 3300025297 Bacteria 25405
91 Ga0209050_1000677 3300025298 Bacteria 51357
92 Ga0209256_1000011 3300025299 Bacteria 865309
93 Ga0207426_1000066 3300025302 Bacteria 351182
94 Ga0209051_1000016 3300025303 Bacteria 541891
95 Ga0209257_1000102 3300025304 Bacteria 251074
96 Ga0207707_10031763 3300025912 Bacteria 4622
97 Ga0207695_10001703 3300025913 Bacteria 35223
98 Ga0207695_10008082 3300025913 Bacteria 13237
99 Ga0207695_10049348 3300025913 Bacteria 4438
100 Ga0207695_10278249 3300025913 Bacteria 1567
101 Ga0207671_10008437 3300025914 Bacteria 8738
102 Ga0207660_10007151 3300025917 Bacteria 7228
103 Ga0207660_10116835 3300025917 Bacteria 2015
104 Ga0207657_10113651 3300025919 Bacteria 2233
105 Ga0207652_10008164 3300025921 Bacteria 8406
106 Ga0207652_10010997 3300025921 Bacteria 7297
107 Ga0207646_10017116 3300025922 Bacteria 6789
108 Ga0207700_10109274 3300025928 Bacteria 2222
109 Ga0207711_10499521 3300025941 Bacteria 1134
110 Ga0207661_10000011 3300025944 Bacteria 361200
111 Ga0207661_10365954 3300025944 Bacteria 1303
112 Ga0207667_10032378 3300025949 Bacteria 5635
113 Ga0207712_10037929 3300025961 Bacteria 3292
114 Ga0207668_10333884 3300025972 Bacteria 1262
115 Ga0207639_10384483 3300026041 Bacteria 1261
116 Ga0207702_10000153 3300026078 Bacteria 80953
117 Ga0207702_10058784 3300026078 Unclassified 3273
118 Ga0207702_10094624 3300026078 Bacteria 2623
119 Ga0207702_10385573 3300026078 Unclassified 1348
120 Ga0207641_10058178 3300026088 Bacteria 3289
121 Ga0207641_10227302 3300026088 Unclassified 1733
122 Ga0207674_10141475 3300026116 Bacteria 2365
123 Ga0207675_100002359 3300026118 Bacteria 18688
124 Ga0209281_1000084 3300027111 Bacteria 254215
125 Ga0209281_1000164 3300027111 Bacteria 157372
126 Ga0209282_1000007 3300027666 Bacteria 254917
127 Ga0307515_10039061 3300028794 Bacteria 7565
128 Ga0265331_10047059 3300031250 Bacteria 2077
129 Ga0265327_10000082 3300031251 Bacteria 205610
130 Ga0265327_10000900 3300031251 Bacteria 43844
131 Ga0265327_10007968 3300031251 Bacteria 8012
132 Ga0265316_10035610 3300031344 Bacteria 4032
133 Ga0307408_100026060 3300031548 Bacteria 4010
134 Ga0307508_10003532 3300031616 Bacteria 15752
135 Ga0265314_10019594 3300031711 Bacteria 5239
136 Ga0265342_10030294 3300031712 Bacteria 3353
137 Ga0265342_10040165 3300031712 Bacteria 2839
138 Ga0307406_10074280 3300031901 Bacteria 2238
139 Ga0307412_10011398 3300031911 Bacteria 5150
140 Ga0307412_10612168 3300031911 Bacteria 924
141 Ga0315914_1000006 3300031967 Bacteria 239817
142 Ga0307409_100015669 3300031995 Bacteria 4984
143 Ga0307416_100118438 3300032002 Unclassified 2353
144 Ga0307411_10101303 3300032005 Bacteria 2038
145 Ga0315913_1000002 3300033430 Bacteria 241452
146 Ga0315915_1000001 3300033464 Bacteria 481518
147 Ga0373953_0112669 3300035117 Bacteria 1151
148 Ga0373933_0354437 3300035724 Bacteria 953
149 Ga0373937_0074813 3300036401 Bacteria 3126
150 Ga0373937_0088901 3300036401 Bacteria 2860
151 Ga0373937_0444349 3300036401 Bacteria 1231
152 Ga0373925_0050733 3300037068 Bacteria 3096
153 Ga0395899_0000045 3300037312 Bacteria 247620
154 Ga0395900_0075980 3300037418 Bacteria 3453
155 Ga0395898_0000057 3300037466 Bacteria 277915
156 Ga0242420_020682 3300038996 Bacteria 1173
157 Ga0451807_1607260 3300041486 Bacteria 1317
158 Ga0466961_0313639 3300044693 Bacteria 957
159 Ga0466963_0171292 3300044694 Bacteria 1513
160 Ga0466963_0398914 3300044694 Bacteria 970
161 Ga0466970_0080743 3300044765 Bacteria 1758
162 Ga0466959_0046019 3300045049 Bacteria 3212
163 Ga0495639_0109091 3300046475 Bacteria 1312
164 Ga0495664_0083656 3300046477 Bacteria 1915
165 Ga0495610_0034722 3300046512 Bacteria 2595
166 Ga0495625_0229987 3300046660 Bacteria 1211
167 Ga0496103_0113960 3300048906 Bacteria 1719
168 Ga0496106_0038282 3300048909 Bacteria 3588
169 Ga0496107_0083119 3300048910 Bacteria 2335
170 Ga0496110_0086750 3300048913 Bacteria 2795
171 Ga0496113_0085641 3300048916 Bacteria 2421
172 Ga0496114_0084453 3300048917 Bacteria 2688
173 Ga0496115_0142027 3300048918 Bacteria 1981
174 Ga0501031_0040535 3300049568 Bacteria 3041
175 Ga0501034_0001215 3300049571 Bacteria 35262
176 Ga0501037_0074101 3300049573 Bacteria 2474
177 Ga0501046_0018856 3300049580 Bacteria 5731
178 Ga0501048_0069486 3300049582 Bacteria 2488
179 Ga0501067_0080249 3300049583 Bacteria 1808
180 Ga0501067_0107406 3300049583 Bacteria 1551
181 Ga0501068_0022061 3300049584 Bacteria 3721
182 Ga0501068_0126181 3300049584 Bacteria 1598
183 Ga0501069_0009236 3300049585 Bacteria 5205
184 Ga0501070_0297319 3300049586 Bacteria 1316
185 Ga0501071_0457321 3300049587 Bacteria 977
186 Ga0501072_0001948 3300049588 Bacteria 15375
187 Ga0501072_0018515 3300049588 Bacteria 5365
188 Ga0501072_0246569 3300049588 Bacteria 1423
189 Ga0501073_0044152 3300049589 Unclassified 3141
190 Ga0501074_0035682 3300049590 Bacteria 3603
191 Ga0501074_0107607 3300049590 Bacteria 1996
192 Ga0501075_0004369 3300049591 Bacteria 9561
193 Ga0501075_0079485 3300049591 Bacteria 2482
194 Ga0501076_0111156 3300049592 Bacteria 2215
195 Ga0501076_0115669 3300049592 Bacteria 2170
196 Ga0501077_0005749 3300049593 Bacteria 7555
197 Ga0501079_0017462 3300049741 Bacteria 5479
198 Ga0501081_0131797 3300049743 Bacteria 1786
199 Ga0501083_0074303 3300049744 Bacteria 2258
200 Ga0501083_0315196 3300049744 Bacteria 1017
201 Ga0501035_0601252 3300049822 Bacteria 896
202 Ga0501044_0166437 3300049823 Bacteria 2179
203 nmdc:mga05p37_152874_c1 3300050507 Eukaryota 2821
204 nmdc:mga05p37_342730_c1 3300050507 Bacteria 1762
205 nmdc:mga09592_24779_c1 3300050508 Bacteria 4961
206 nmdc:mga09592_32652_c1 3300050508 Bacteria 4340
207 nmdc:mga0qj67_16399_c1 3300050509 Bacteria 5618
208 nmdc:mga0qj67_24052_c1 3300050509 Bacteria 4693
209 nmdc:mga06r32_163319_c1 3300050510 Eukaryota 2210
210 nmdc:mga06r32_60018_c1 3300050510 Bacteria 3659
211 nmdc:mga0n895_179696_c1 3300050512 Bacteria 2147
212 nmdc:mga0a205_167854_c1 3300050515 Bacteria 2090
213 Ga0500642_0000765 3300053130 Bacteria 9429
214 Ga0500588_0000215 3300053146 Bacteria 8140
215 Ga0500637_0011546 3300053178 Bacteria 4574
216 Ga0501084_0008684 3300054114 Bacteria 8401
217 Ga0501084_0069868 3300054114 Bacteria 2940
218 Ga0501082_0000475 3300060353 Bacteria 35497
219 Ga0501082_0103759 3300060353 Bacteria 2459

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050515 nmdc:mga0a205_167854_c1 nmdc:mga0a205_167854_c1_1455_2078 198
2 3300006946 Ga0079104_1014594 Ga0079104_10145943 239
3 3300022739 Ga0228711_1000001 Ga0228711_1000001230 239
4 3300022740 Ga0228710_1000001 Ga0228710_100000194 239
5 3300027111 Ga0209281_1000164 Ga0209281_1000164135 239
6 3300027666 Ga0209282_1000007 Ga0209282_100000721 239
7 3300031967 Ga0315914_1000006 Ga0315914_1000006221 239
8 3300033430 Ga0315913_1000002 Ga0315913_100000221 239
9 3300033464 Ga0315915_1000001 Ga0315915_1000001465 239
10 3300031616 Ga0307508_10003532 Ga0307508_1000353213 240
11 3300049583 Ga0501067_0107406 Ga0501067_0107406_177_1007 240
12 3300005336 Ga0070680_100092267 Ga0070680_1000922673 242
13 3300005458 Ga0070681_10010115 Ga0070681_1001011510 242
14 3300005530 Ga0070679_100035679 Ga0070679_1000356795 242
15 3300009093 Ga0105240_10070524 Ga0105240_100705242 242
16 3300025912 Ga0207707_10031763 Ga0207707_100317633 242
17 3300025913 Ga0207695_10049348 Ga0207695_100493482 242
18 3300025917 Ga0207660_10116835 Ga0207660_101168352 242
19 3300025921 Ga0207652_10010997 Ga0207652_100109973 242
20 3300007265 Ga0099794_10092022 Ga0099794_100920221 244
21 3300005336 Ga0070680_100053370 Ga0070680_1000533703 245
22 3300007076 Ga0075435_100195489 Ga0075435_1001954892 246
23 3300009177 Ga0105248_10090931 Ga0105248_100909312 246
24 3300025941 Ga0207711_10499521 Ga0207711_104995211 246
25 3300050512 nmdc:mga0n895_179696_c1 nmdc:mga0n895_179696_c1_1135_1905 246
26 3300006847 Ga0075431_100058230 Ga0075431_1000582303 248
27 3300060353 Ga0501082_0000475 Ga0501082_0000475_5648_6412 248
28 3300005329 Ga0070683_100000006 Ga0070683_10000000679 249
29 3300005535 Ga0070684_100000018 Ga0070684_10000001879 249
30 3300025944 Ga0207661_10000011 Ga0207661_1000001179 249
31 iso_pu_bacteria 2821443989 2821449153 249
32 iso_pu_bacteria 2844533157 2844539266 249
33 iso_pu_bacteria 639633007 639787789 249
34 3300049568 Ga0501031_0040535 Ga0501031_0040535_1615_2403 250
35 3300049573 Ga0501037_0074101 Ga0501037_0074101_369_1157 250
36 3300049580 Ga0501046_0018856 Ga0501046_0018856_3357_4145 250
37 3300049582 Ga0501048_0069486 Ga0501048_0069486_1138_1926 250
38 3300049590 Ga0501074_0035682 Ga0501074_0035682_2727_3515 250
39 iso_pu_bacteria 2522572158 2523106140 250
40 iso_pu_bacteria 2597490356 2599105314 250
41 iso_pu_bacteria 2846952575 2846955004 250
42 iso_pu_bacteria 2848858292 2848858703 250
43 3300025917 Ga0207660_10007151 Ga0207660_100071513 251
44 3300025921 Ga0207652_10008164 Ga0207652_100081642 251
45 3300031250 Ga0265331_10047059 Ga0265331_100470592 251
46 3300031251 Ga0265327_10000082 Ga0265327_1000008281 251
47 3300035117 Ga0373953_0112669 Ga0373953_0112669_141_914 251
48 3300036401 Ga0373937_0444349 Ga0373937_0444349_411_1184 251
49 3300037068 Ga0373925_0050733 Ga0373925_0050733_1675_2520 251
50 3300003775 Ga0055524_1000079 Ga0055524_100007962 252
51 3300003791 Ga0055530_10003164 Ga0055530_100031644 252
52 3300003792 Ga0055540_1000004 Ga0055540_1000004176 252
53 3300005327 Ga0070658_10089738 Ga0070658_100897384 252
54 3300005336 Ga0070680_100068744 Ga0070680_1000687445 252
55 3300005336 Ga0070680_100218158 Ga0070680_1002181582 252
56 3300005339 Ga0070660_100160970 Ga0070660_1001609702 252
57 3300005366 Ga0070659_100157677 Ga0070659_1001576771 252
58 3300005458 Ga0070681_10017096 Ga0070681_1001709610 252
59 3300005458 Ga0070681_10221104 Ga0070681_102211042 252
60 3300005471 Ga0070698_100313081 Ga0070698_1003130812 252
61 3300005530 Ga0070679_100107630 Ga0070679_1001076302 252
62 3300005614 Ga0068856_100070803 Ga0068856_1000708034 252
63 3300006946 Ga0079104_1000100 Ga0079104_10001007 252
64 3300009093 Ga0105240_10002249 Ga0105240_100022492 252
65 3300009093 Ga0105240_10208004 Ga0105240_102080043 252
66 3300009551 Ga0105238_10019445 Ga0105238_100194454 252
67 3300013104 Ga0157370_10059336 Ga0157370_100593366 252
68 3300013105 Ga0157369_10136203 Ga0157369_101362033 252
69 3300013307 Ga0157372_10142547 Ga0157372_101425473 252
70 3300014969 Ga0157376_10523752 Ga0157376_105237521 252
71 3300025291 Ga0209675_1014978 Ga0209675_10149783 252
72 3300025298 Ga0209050_1000677 Ga0209050_100067741 252
73 3300025299 Ga0209256_1000011 Ga0209256_100001163 252
74 3300025303 Ga0209051_1000016 Ga0209051_1000016269 252
75 3300025304 Ga0209257_1000102 Ga0209257_100010224 252
76 3300025913 Ga0207695_10008082 Ga0207695_1000808210 252
77 3300025913 Ga0207695_10278249 Ga0207695_102782491 252
78 3300025919 Ga0207657_10113651 Ga0207657_101136512 252
79 3300025928 Ga0207700_10109274 Ga0207700_101092744 252
80 3300025944 Ga0207661_10365954 Ga0207661_103659543 252
81 3300026078 Ga0207702_10094624 Ga0207702_100946244 252
82 3300026116 Ga0207674_10141475 Ga0207674_101414753 252
83 3300027111 Ga0209281_1000084 Ga0209281_1000084102 252
84 3300035724 Ga0373933_0354437 Ga0373933_0354437_157_918 252
85 3300036401 Ga0373937_0088901 Ga0373937_0088901_203_1000 252
86 3300037466 Ga0395898_0000057 Ga0395898_0000057_91443_92243 252
87 3300041486 Ga0451807_1607260 Ga0451807_1607260_52_813 252
88 3300044693 Ga0466961_0313639 Ga0466961_0313639_73_855 252
89 3300044694 Ga0466963_0398914 Ga0466963_0398914_43_840 252
90 3300044765 Ga0466970_0080743 Ga0466970_0080743_200_982 252
91 3300045049 Ga0466959_0046019 Ga0466959_0046019_132_914 252
92 3300048917 Ga0496114_0084453 Ga0496114_0084453_457_1218 252
93 3300048918 Ga0496115_0142027 Ga0496115_0142027_96_893 252
94 3300049586 Ga0501070_0297319 Ga0501070_0297319_343_1140 252
95 3300049589 Ga0501073_0044152 Ga0501073_0044152_1875_2636 252
96 iso_pu_bacteria 2508501122 2509107394 252
97 iso_pu_bacteria 2509276019 2509374616 252
98 iso_pu_bacteria 2582581283 2585165337 252
99 iso_pu_bacteria 2582581306 2585266434 252
100 iso_pu_bacteria 2582581865 2585387412 252
101 iso_pu_bacteria 2599185352 2600191757 252
102 iso_pu_bacteria 2643221607 2644046792 252
103 iso_pu_bacteria 2643221636 2644202499 252
104 iso_pu_bacteria 2643221637 2644206398 252
105 iso_pu_bacteria 2643221686 2644479581 252
106 iso_pu_bacteria 2643221689 2644500766 252
107 iso_pu_bacteria 2643221718 2644650045 252
108 iso_pu_bacteria 2643221723 2644673727 252
109 iso_pu_bacteria 2657244999 2657682162 252
110 iso_pu_bacteria 2791355082 2792584010 252
111 iso_pu_bacteria 2802429268 2804751180 252
112 iso_pu_bacteria 2850079185 2850080316 252
113 iso_pu_bacteria 8049293176 8049293760 252
114 3300003187 JGI25151J46595_10001965 JGI25151J46595_1000196511 253
115 3300003215 JGI25153J46596_10011972 JGI25153J46596_100119725 253
116 3300003320 rootH2_10234541 rootH2_102345412 253
117 3300003323 rootH1_10038156 rootH1_100381563 253
118 3300005331 Ga0070670_100578368 Ga0070670_1005783681 253
119 3300005347 Ga0070668_100312712 Ga0070668_1003127122 253
120 3300005440 Ga0070705_100408480 Ga0070705_1004084801 253
121 3300005614 Ga0068856_100000405 Ga0068856_10000040525 253
122 3300005719 Ga0068861_100004019 Ga0068861_1000040193 253
123 3300005841 Ga0068863_100332856 Ga0068863_1003328562 253
124 3300005983 Ga0081540_1027305 Ga0081540_10273053 253
125 3300009177 Ga0105248_10302497 Ga0105248_103024972 253
126 3300009545 Ga0105237_10006483 Ga0105237_1000648310 253
127 3300009545 Ga0105237_10074918 Ga0105237_100749183 253
128 3300009553 Ga0105249_10022219 Ga0105249_100222192 253
129 3300009986 Ga0105033_101357 Ga0105033_1013572 253
130 3300013307 Ga0157372_10550640 Ga0157372_105506402 253
131 3300014325 Ga0163163_10000443 Ga0163163_1000044314 253
132 3300025284 Ga0209130_1001202 Ga0209130_100120213 253
133 3300025294 Ga0209025_1000514 Ga0209025_100051415 253
134 3300025297 Ga0209758_1001641 Ga0209758_100164114 253
135 3300025302 Ga0207426_1000066 Ga0207426_1000066226 253
136 3300025914 Ga0207671_10008437 Ga0207671_100084377 253
137 3300025961 Ga0207712_10037929 Ga0207712_100379294 253
138 3300025972 Ga0207668_10333884 Ga0207668_103338842 253
139 3300026041 Ga0207639_10384483 Ga0207639_103844832 253
140 3300026078 Ga0207702_10000153 Ga0207702_1000015316 253
141 3300026088 Ga0207641_10058178 Ga0207641_100581785 253
142 3300026118 Ga0207675_100002359 Ga0207675_10000235912 253
143 3300037312 Ga0395899_0000045 Ga0395899_0000045_32687_33463 253
144 3300046512 Ga0495610_0034722 Ga0495610_0034722_861_1625 253
145 3300049571 Ga0501034_0001215 Ga0501034_0001215_2669_3433 253
146 3300049588 Ga0501072_0001948 Ga0501072_0001948_745_1512 253
147 3300049744 Ga0501083_0074303 Ga0501083_0074303_1126_1893 253
148 3300049744 Ga0501083_0315196 Ga0501083_0315196_90_857 253
149 3300053130 Ga0500642_0000765 Ga0500642_0000765_8522_9286 253
150 3300053178 Ga0500637_0011546 Ga0500637_0011546_893_1654 253
151 3300054114 Ga0501084_0069868 Ga0501084_0069868_568_1335 253
152 3300005436 Ga0070713_100018366 Ga0070713_1000183663 254
153 3300005439 Ga0070711_100555799 Ga0070711_1005557991 254
154 3300005536 Ga0070697_100050017 Ga0070697_1000500172 254
155 3300005563 Ga0068855_100064797 Ga0068855_1000647973 254
156 3300005563 Ga0068855_100760593 Ga0068855_1007605932 254
157 3300005614 Ga0068856_100066001 Ga0068856_1000660012 254
158 3300005614 Ga0068856_100219488 Ga0068856_1002194882 254
159 3300005616 Ga0068852_100083635 Ga0068852_1000836353 254
160 3300005841 Ga0068863_100181569 Ga0068863_1001815691 254
161 3300005985 Ga0081539_10214244 Ga0081539_102142441 254
162 3300006028 Ga0070717_10020390 Ga0070717_100203903 254
163 3300006846 Ga0075430_100022130 Ga0075430_1000221303 254
164 3300006846 Ga0075430_100022243 Ga0075430_1000222435 254
165 3300006847 Ga0075431_100000797 Ga0075431_1000007978 254
166 3300006847 Ga0075431_100024002 Ga0075431_1000240022 254
167 3300006880 Ga0075429_100009202 Ga0075429_1000092023 254
168 3300009093 Ga0105240_10039909 Ga0105240_100399092 254
169 3300009147 Ga0114129_10012822 Ga0114129_100128226 254
170 3300009147 Ga0114129_10046885 Ga0114129_100468852 254
171 3300009147 Ga0114129_10368926 Ga0114129_103689262 254
172 3300013105 Ga0157369_10137614 Ga0157369_101376142 254
173 3300013306 Ga0163162_10781450 Ga0163162_107814501 254
174 3300013308 Ga0157375_10149380 Ga0157375_101493803 254
175 3300017792 Ga0163161_10304394 Ga0163161_103043942 254
176 3300025913 Ga0207695_10001703 Ga0207695_1000170322 254
177 3300025949 Ga0207667_10032378 Ga0207667_100323782 254
178 3300026078 Ga0207702_10058784 Ga0207702_100587843 254
179 3300026078 Ga0207702_10385573 Ga0207702_103855732 254
180 3300026088 Ga0207641_10227302 Ga0207641_102273022 254
181 3300031251 Ga0265327_10000900 Ga0265327_1000090024 254
182 3300031548 Ga0307408_100026060 Ga0307408_1000260602 254
183 3300031901 Ga0307406_10074280 Ga0307406_100742802 254
184 3300031911 Ga0307412_10011398 Ga0307412_100113982 254
185 3300031911 Ga0307412_10612168 Ga0307412_106121681 254
186 3300031995 Ga0307409_100015669 Ga0307409_1000156696 254
187 3300032002 Ga0307416_100118438 Ga0307416_1001184382 254
188 3300032005 Ga0307411_10101303 Ga0307411_101013032 254
189 3300036401 Ga0373937_0074813 Ga0373937_0074813_334_1155 254
190 3300037418 Ga0395900_0075980 Ga0395900_0075980_1275_2048 254
191 3300038996 Ga0242420_020682 Ga0242420_020682_196_972 254
192 3300046475 Ga0495639_0109091 Ga0495639_0109091_224_1045 254
193 3300046477 Ga0495664_0083656 Ga0495664_0083656_511_1332 254
194 3300049583 Ga0501067_0080249 Ga0501067_0080249_64_831 254
195 3300049584 Ga0501068_0022061 Ga0501068_0022061_2177_2956 254
196 3300049584 Ga0501068_0126181 Ga0501068_0126181_86_853 254
197 3300049585 Ga0501069_0009236 Ga0501069_0009236_4358_5125 254
198 3300049587 Ga0501071_0457321 Ga0501071_0457321_28_807 254
199 3300049588 Ga0501072_0018515 Ga0501072_0018515_4134_4913 254
200 3300049590 Ga0501074_0107607 Ga0501074_0107607_400_1179 254
201 3300049591 Ga0501075_0004369 Ga0501075_0004369_4933_5712 254
202 3300049592 Ga0501076_0115669 Ga0501076_0115669_187_966 254
203 3300049593 Ga0501077_0005749 Ga0501077_0005749_6410_7189 254
204 3300049741 Ga0501079_0017462 Ga0501079_0017462_265_1044 254
205 3300050507 nmdc:mga05p37_152874_c1 nmdc:mga05p37_152874_c1_753_1529 254
206 3300050507 nmdc:mga05p37_342730_c1 nmdc:mga05p37_342730_c1_507_1325 254
207 3300050508 nmdc:mga09592_24779_c1 nmdc:mga09592_24779_c1_3735_4511 254
208 3300050508 nmdc:mga09592_32652_c1 nmdc:mga09592_32652_c1_2508_3326 254
209 3300050509 nmdc:mga0qj67_16399_c1 nmdc:mga0qj67_16399_c1_3238_4014 254
210 3300050509 nmdc:mga0qj67_24052_c1 nmdc:mga0qj67_24052_c1_2576_3394 254
211 3300050510 nmdc:mga06r32_163319_c1 nmdc:mga06r32_163319_c1_1369_2145 254
212 3300050510 nmdc:mga06r32_60018_c1 nmdc:mga06r32_60018_c1_2814_3590 254
213 3300053146 Ga0500588_0000215 Ga0500588_0000215_6664_7452 254
214 3300054114 Ga0501084_0008684 Ga0501084_0008684_2084_2863 254
215 3300060353 Ga0501082_0103759 Ga0501082_0103759_549_1328 254
216 3300005468 Ga0070707_100001640 Ga0070707_1000016402 255
217 3300005614 Ga0068856_100182346 Ga0068856_1001823462 255
218 3300005981 Ga0081538_10030634 Ga0081538_100306342 255
219 3300006847 Ga0075431_100803058 Ga0075431_1008030581 255
220 3300025922 Ga0207646_10017116 Ga0207646_100171166 255
221 3300031251 Ga0265327_10007968 Ga0265327_100079687 255
222 3300031344 Ga0265316_10035610 Ga0265316_100356103 255
223 3300031711 Ga0265314_10019594 Ga0265314_100195942 255
224 3300031712 Ga0265342_10030294 Ga0265342_100302943 255
225 3300031712 Ga0265342_10040165 Ga0265342_100401652 255
226 3300048906 Ga0496103_0113960 Ga0496103_0113960_39_848 255
227 3300048909 Ga0496106_0038282 Ga0496106_0038282_2682_3491 255
228 3300048910 Ga0496107_0083119 Ga0496107_0083119_1481_2287 255
229 3300048913 Ga0496110_0086750 Ga0496110_0086750_1439_2248 255
230 3300048916 Ga0496113_0085641 Ga0496113_0085641_140_946 255
231 3300049588 Ga0501072_0246569 Ga0501072_0246569_14_805 255
232 3300049591 Ga0501075_0079485 Ga0501075_0079485_1596_2387 255
233 3300049592 Ga0501076_0111156 Ga0501076_0111156_369_1160 255
234 3300049743 Ga0501081_0131797 Ga0501081_0131797_120_911 255
235 3300049822 Ga0501035_0601252 Ga0501035_0601252_119_886 255
236 3300049823 Ga0501044_0166437 Ga0501044_0166437_1027_1794 255
237 3300002739 JGI25158J39367_1001337 JGI25158J39367_10013372 256
238 3300003775 Ga0055524_1000777 Ga0055524_100077710 256
239 3300003794 Ga0055531_10035916 Ga0055531_100359162 256
240 3300013249 Ga0171463_1001 Ga0171463_1001402 256
241 3300021327 Ga0214543_1000003 Ga0214543_1000003316 256
242 3300028794 Ga0307515_10039061 Ga0307515_100390615 256
243 3300044694 Ga0466963_0171292 Ga0466963_0171292_36_854 256
244 3300046660 Ga0495625_0229987 Ga0495625_0229987_374_1144 256

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

75

167

0.94

PF13649

Methyltransf_25

Methyltransferase domain

74

163

0.94

PF13847

Methyltransf_31

Methyltransferase domain

68

235

0.87

PF01728

FtsJ

FtsJ-like methyltransferase

59

191

0.86

PF08242

Methyltransf_12

Methyltransferase domain

75

165

0.86

PF05175

MTS

Methyltransferase small domain

53

175

0.83

PF13489

Methyltransf_23

Methyltransferase domain

51

254

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p35-assembly1.cif.gz_B crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9577 13 256
2p35-assembly1.cif.gz_B crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9499 13 256
2p35-assembly1.cif.gz_A crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9381 6 256
2p35-assembly1.cif.gz_A crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens 0.9306 6 256
3ccf-assembly1.cif.gz_A crystal structure of putative methyltransferase (yp_321342.1) from anabaena variabilis atcc 29413 at 1.90 a resolution 0.8252 20 256
ID Description Score Start End Superfamily
2p35B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9552 13 256 3.40.50.150
2p35B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9439 13 256 3.40.50.150
2p35A02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;S-adenosyl-L-methionine-dependent methyltransferases 0.8805 131 235 1.10.150.290
3dtnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8678 10 130 3.40.50.150
2p35A02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;S-adenosyl-L-methionine-dependent methyltransferases 0.8567 131 235 1.10.150.290
ID Description Score Start End GO Terms
AF-A4A7J4-F1-model_v4 Trans-aconitate methyltransferase (EC 2.1.1.144) 0.9746 1 255 GO:0030798
GO:0032259
AF-A0A0F4YE69-F1-model_v4 Methyltransferase domain-containing protein 0.9695 3 256 GO:0030798
GO:0032259
AF-A0A0A1SRF0-F1-model_v4 Methyltransferase domain-containing protein 0.9689 1 256 GO:0030798
GO:0032259
AF-A0A0Q8BKD9-F1-model_v4 deleted 0.9683 1 256
AF-A4A7J4-F1-model_v4 Trans-aconitate methyltransferase (EC 2.1.1.144) 0.9671 1 255 GO:0030798
GO:0032259

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pLDDT pTM Quality
92.99 0.88 High
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Predicted Structure (AlphaFold2)

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