F356271

General Info

Members Datasets Scaffolds Average Seq Length
244 180 488 472

Family's Representative Sequence

Representative Sequence 3300005441|Ga0070700_100000007|Ga0070700_10000000751
Length 505
Sequence MVVLLPEWGGDELCTIQICNGVRSGVAPLPRSGKDRAVVEHRVAGAPLDFSGLRAELDVPGDFSSLALAGAQAAAQAVQLPDLDRTDLELVTVDPPGSMDLDQALHIAPTDHGYRVSYAIADLGSFVPPASALDDELQQRGETIYFPDARVPLHPTVLSEGAASLLPDQVRPAVLWQFELNGSGEVTEVDVRRARVRSRARLDYAGVQASIEAGNPHAAVRLLPEVGALRLALARQRHAINLDLPEQEVERAGSSWTLRYRAPLPVESFNAEISLMTGMAAAQLMLRGGFGILRTVPPADSKTIDQLRRIAPALGVTWPDGAAPGDVLAGLSRADSRQVAFLEHAASLLRGAAYVAFDGQPPEQPLHAGIGAPYAHATAPLRRLVDRYVSEICLAVQAGAPVPQWVRDRVPALPASMATADHRAHAVDRAVLDLTEAWLLQDRIGQTFPAVVLSADGDGAAISIDEPAIRAQCTGASLQPGQQIKARLVAADVATRTVRFESAGQ

Samples

Sample ID Description Type Environment
1 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300012494 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610 Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
120 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
121 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
122 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
123 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
124 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
125 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
139 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
140 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
161 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
177 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
178 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
179 2643221561 Nocardioides sp. Root151 Isolate Unclassified
180 2739367898 Nocardioides sp. CF479 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.36
Metatranscriptomes 0.82
Isolates 0.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.82
Nodule 0
Rhizoplane 7.79
Rhizosphere 87.3
Stem 0
Stem Tuber 0
Unclassified 2.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070700_100000007 3300005441 Bacteria 198866
2 rootH2_10196542 3300003320 Bacteria 3404
3 rootL2_10173480 3300003322 Bacteria 3148
4 JGI25407J50210_10001614 3300003373 Bacteria 5150
5 Ga0070658_10019508 3300005327 Bacteria 5429
6 Ga0070658_10104292 3300005327 Bacteria 2346
7 Ga0070670_100031973 3300005331 Bacteria 4531
8 Ga0068869_100069592 3300005334 Bacteria 2602
9 Ga0070680_100013498 3300005336 Bacteria 6363
10 Ga0070682_100010621 3300005337 Bacteria 5231
11 Ga0068868_100075423 3300005338 Bacteria 2695
12 Ga0070660_100014123 3300005339 Bacteria 5750
13 Ga0070691_10016029 3300005341 Bacteria 3444
14 Ga0070668_100044324 3300005347 Bacteria 3413
15 Ga0070675_100020874 3300005354 Bacteria 5229
16 Ga0070671_100005402 3300005355 Bacteria 10189
17 Ga0070659_100021147 3300005366 Bacteria 4950
18 Ga0070667_100019546 3300005367 Bacteria 5620
19 Ga0070709_10005858 3300005434 Bacteria 6665
20 Ga0070714_100043437 3300005435 Bacteria 3801
21 Ga0070713_100070393 3300005436 Bacteria 2953
22 Ga0070701_10012229 3300005438 Bacteria 3863
23 Ga0070705_100030804 3300005440 Bacteria 2965
24 Ga0070700_100018921 3300005441 Bacteria 3968
25 Ga0070663_100085094 3300005455 Bacteria 2333
26 Ga0070662_100015223 3300005457 Bacteria 5148
27 Ga0070679_100006502 3300005530 Bacteria 10897
28 Ga0070684_100064664 3300005535 Bacteria 3209
29 Ga0070693_100006760 3300005547 Bacteria 5568
30 Ga0070665_100275148 3300005548 Bacteria 1685
31 Ga0070664_100027185 3300005564 Bacteria 4753
32 Ga0068856_100072478 3300005614 Bacteria 3410
33 Ga0068852_100030501 3300005616 Bacteria 4439
34 Ga0068859_100000409 3300005617 Bacteria 42671
35 Ga0068866_10008014 3300005718 Bacteria 4437
36 Ga0068870_10000435 3300005840 Bacteria 15823
37 Ga0068863_100004571 3300005841 Bacteria 13648
38 Ga0068863_100010169 3300005841 Bacteria 9151
39 Ga0068863_100152934 3300005841 Bacteria 2208
40 Ga0068858_100006043 3300005842 Bacteria 11805
41 Ga0068858_100028835 3300005842 Bacteria 5154
42 Ga0068860_100000102 3300005843 Bacteria 140115
43 Ga0081455_10000386 3300005937 Bacteria 58274
44 Ga0081455_10003349 3300005937 Bacteria 18477
45 Ga0081455_10004318 3300005937 Bacteria 16005
46 Ga0081455_10018397 3300005937 Bacteria 6659
47 Ga0081538_10000025 3300005981 Bacteria 129366
48 Ga0081540_1001693 3300005983 Bacteria 18703
49 Ga0070717_10056764 3300006028 Bacteria 3236
50 Ga0075365_10011913 3300006038 Bacteria 5136
51 Ga0075432_10000011 3300006058 Bacteria 35422
52 Ga0075432_10004174 3300006058 Bacteria 4921
53 Ga0075367_10023840 3300006178 Bacteria 3447
54 Ga0075428_100005344 3300006844 Bacteria 14279
55 Ga0075428_100060961 3300006844 Bacteria 4131
56 Ga0075428_100116721 3300006844 Bacteria 2907
57 Ga0075431_100027712 3300006847 Bacteria 5816
58 Ga0075433_10001096 3300006852 Bacteria 19545
59 Ga0075433_10001469 3300006852 Bacteria 17390
60 Ga0075434_100004371 3300006871 Bacteria 12725
61 Ga0075434_100057435 3300006871 Bacteria 3867
62 Ga0068865_100065097 3300006881 Bacteria 2567
63 Ga0075436_100002674 3300006914 Bacteria 12256
64 Ga0097620_100000409 3300006931 Bacteria 42671
65 Ga0075435_100000387 3300007076 Bacteria 26901
66 Ga0075435_100001615 3300007076 Bacteria 14583
67 Ga0075435_100011777 3300007076 Bacteria 6453
68 Ga0111539_10000029 3300009094 Bacteria 184798
69 Ga0111539_10042388 3300009094 Bacteria 5465
70 Ga0114129_10014587 3300009147 Bacteria 11195
71 Ga0114129_10149177 3300009147 Bacteria 3200
72 Ga0114129_10316616 3300009147 Bacteria 2075
73 Ga0105243_10037275 3300009148 Bacteria 3778
74 Ga0105248_10093294 3300009177 Bacteria 3390
75 Ga0105238_10044887 3300009551 Bacteria 4466
76 Ga0105249_10008590 3300009553 Bacteria 8903
77 Ga0105249_10042964 3300009553 Bacteria 4111
78 Ga0105249_10156798 3300009553 Bacteria 2196
79 Ga0105239_10080510 3300010375 Bacteria 3584
80 Ga0105246_10025909 3300011119 Bacteria 3825
81 Ga0157341_1000088 3300012494 Bacteria 3879
82 Ga0157371_10005046 3300013102 Bacteria 11290
83 Ga0157369_10022123 3300013105 Bacteria 7103
84 Ga0157374_10060785 3300013296 Bacteria 3537
85 Ga0157372_10025901 3300013307 Bacteria 6379
86 Ga0157372_10204802 3300013307 Unclassified 2286
87 Ga0157375_10109852 3300013308 Bacteria 2854
88 Ga0163163_10021569 3300014325 Bacteria 6081
89 Ga0157380_10223216 3300014326 Bacteria 1687
90 Ga0182008_10053442 3300014497 Unclassified 2000
91 Ga0157376_10074680 3300014969 Bacteria 2891
92 Ga0206353_11285007 3300020082 Bacteria 2722
93 Ga0206353_11896707 3300020082 Unclassified 1673
94 Ga0207688_10007128 3300025901 Bacteria 6079
95 Ga0207688_10025239 3300025901 Bacteria 3263
96 Ga0207680_10109174 3300025903 Bacteria 1791
97 Ga0207699_10059480 3300025906 Bacteria 2290
98 Ga0207643_10003063 3300025908 Bacteria 8987
99 Ga0207695_10116006 3300025913 Bacteria 2652
100 Ga0207657_10039099 3300025919 Bacteria 4218
101 Ga0207652_10027375 3300025921 Bacteria 4750
102 Ga0207694_10074450 3300025924 Bacteria 2658
103 Ga0207650_10002852 3300025925 Bacteria 11931
104 Ga0207690_10026222 3300025932 Bacteria 3668
105 Ga0207690_10058167 3300025932 Bacteria 2614
106 Ga0207706_10023864 3300025933 Bacteria 5487
107 Ga0207706_10051592 3300025933 Bacteria 3632
108 Ga0207709_10082686 3300025935 Bacteria 2074
109 Ga0207704_10030407 3300025938 Bacteria 3027
110 Ga0207665_10149402 3300025939 Bacteria 1672
111 Ga0207711_10042971 3300025941 Bacteria 3853
112 Ga0207689_10013228 3300025942 Bacteria 7040
113 Ga0207661_10003920 3300025944 Bacteria 10391
114 Ga0207661_10004263 3300025944 Bacteria 10012
115 Ga0207679_10046953 3300025945 Bacteria 3134
116 Ga0207667_10118729 3300025949 Bacteria 2725
117 Ga0207668_10071168 3300025972 Bacteria 2483
118 Ga0207640_10046071 3300025981 Bacteria 2803
119 Ga0207658_10032583 3300025986 Bacteria 3710
120 Ga0207677_10012727 3300026023 Bacteria 4850
121 Ga0207703_10001645 3300026035 Bacteria 20116
122 Ga0207678_10068913 3300026067 Bacteria 3034
123 Ga0207708_10000006 3300026075 Bacteria 266916
124 Ga0207702_10051321 3300026078 Bacteria 3485
125 Ga0207702_10111893 3300026078 Bacteria 2429
126 Ga0207641_10026783 3300026088 Bacteria 4759
127 Ga0207641_10064280 3300026088 Bacteria 3136
128 Ga0207676_10005362 3300026095 Bacteria 9080
129 Ga0207676_10245147 3300026095 Bacteria 1610
130 Ga0207674_10020410 3300026116 Bacteria 7159
131 Ga0207674_10113880 3300026116 Bacteria 2677
132 Ga0207675_100011296 3300026118 Bacteria 8361
133 Ga0207675_100037858 3300026118 Bacteria 4500
134 Ga0207683_10002283 3300026121 Bacteria 16812
135 Ga0207698_10104680 3300026142 Bacteria 2355
136 Ga0207428_10000496 3300027907 Bacteria 47043
137 Ga0207428_10000730 3300027907 Bacteria 37917
138 Ga0268264_10000171 3300028381 Bacteria 141050
139 Ga0268264_10170356 3300028381 Bacteria 1968
140 Ga0307408_100009747 3300031548 Bacteria 6331
141 Ga0307405_10014023 3300031731 Bacteria 4296
142 Ga0307405_10017323 3300031731 Bacteria 3950
143 Ga0307413_10000596 3300031824 Bacteria 12149
144 Ga0307413_10005752 3300031824 Bacteria 5574
145 Ga0307410_10002149 3300031852 Bacteria 9371
146 Ga0307410_10067127 3300031852 Bacteria 2473
147 Ga0307406_10000474 3300031901 Bacteria 23161
148 Ga0307407_10002826 3300031903 Bacteria 6936
149 Ga0307409_100001967 3300031995 Bacteria 10524
150 Ga0307409_100026876 3300031995 Bacteria 4068
151 Ga0307409_100093271 3300031995 Bacteria 2473
152 Ga0307416_100001105 3300032002 Bacteria 14461
153 Ga0307416_100038660 3300032002 Bacteria 3683
154 Ga0307416_100045040 3300032002 Bacteria 3470
155 Ga0307414_10014977 3300032004 Bacteria 4669
156 Ga0307414_10033272 3300032004 Bacteria 3406
157 Ga0307411_10017446 3300032005 Bacteria 4091
158 Ga0307415_100033988 3300032126 Bacteria 3314
159 Ga0307415_100094872 3300032126 Bacteria 2170
160 Ga0436365_1831378 3300039437 Bacteria 3093
161 Ga0439463_015656 3300042016 Bacteria 1876
162 Ga0439435_0005333 3300042436 Bacteria 2823
163 Ga0439444_0003205 3300042437 Bacteria 2298
164 Ga0439464_0024930 3300042439 Bacteria 1655
165 Ga0439460_0005293 3300042461 Bacteria 3163
166 Ga0439440_0001089 3300042993 Bacteria 4846
167 Ga0466969_0004497 3300044656 Bacteria 7421
168 Ga0466969_0040218 3300044656 Bacteria 2343
169 Ga0466972_0015279 3300044658 Bacteria 3839
170 Ga0466972_0049928 3300044658 Bacteria 2020
171 Ga0466965_0028058 3300044683 Bacteria 2733
172 Ga0466966_0056215 3300044684 Bacteria 2490
173 Ga0466961_0000445 3300044693 Bacteria 26395
174 Ga0466961_0006323 3300044693 Bacteria 7521
175 Ga0466961_0011008 3300044693 Bacteria 5781
176 Ga0466971_0009393 3300044719 Bacteria 4271
177 Ga0466971_0042220 3300044719 Bacteria 2049
178 Ga0466970_0007949 3300044765 Bacteria 5325
179 Ga0466970_0008944 3300044765 Bacteria 5051
180 Ga0466957_0032215 3300044842 Bacteria 3138
181 Ga0466959_0003616 3300045049 Bacteria 10195
182 Ga0466959_0181719 3300045049 Bacteria 1471
183 Ga0466958_0017317 3300045836 Bacteria 4163
184 Ga0466967_0001368 3300045976 Bacteria 14047
185 Ga0466967_0048381 3300045976 Bacteria 3712
186 Ga0495629_0116388 3300046459 Bacteria 1863
187 Ga0495651_0043546 3300046462 Unclassified 3482
188 Ga0495618_0014518 3300046514 Bacteria 4801
189 Ga0495628_0116544 3300046516 Unclassified 2051
190 Ga0495652_0001952 3300046529 Bacteria 21893
191 Ga0495645_0166559 3300046543 Bacteria 1519
192 Ga0495656_0040560 3300046615 Bacteria 1941
193 Ga0495635_0004968 3300046663 Bacteria 9262
194 Ga0495599_0046330 3300046678 Bacteria 2727
195 Ga0495623_0012780 3300046679 Bacteria 5436
196 Ga0495613_0059760 3300046689 Bacteria 2793
197 Ga0496100_0034257 3300048903 Bacteria 3185
198 Ga0496102_0000090 3300048905 Bacteria 127346
199 Ga0496102_0013078 3300048905 Bacteria 7183
200 Ga0496102_0062523 3300048905 Bacteria 3409
201 Ga0496103_0000034 3300048906 Bacteria 189284
202 Ga0496104_0118791 3300048907 Bacteria 2538
203 Ga0496105_0072841 3300048908 Bacteria 2838
204 Ga0496105_0128377 3300048908 Bacteria 2091
205 Ga0496106_0028226 3300048909 Bacteria 4180
206 Ga0496108_0103302 3300048911 Bacteria 2431
207 Ga0496109_0003515 3300048912 Bacteria 13092
208 Ga0496109_0144291 3300048912 Bacteria 2227
209 Ga0496110_0004971 3300048913 Bacteria 10377
210 Ga0496111_0003812 3300048914 Bacteria 9407
211 Ga0496112_0026936 3300048915 Bacteria 5540
212 Ga0496112_0053089 3300048915 Bacteria 3979
213 Ga0496112_0184900 3300048915 Bacteria 2047
214 Ga0496113_0023552 3300048916 Bacteria 4366
215 Ga0496114_0015166 3300048917 Bacteria 6198
216 Ga0496117_0067284 3300048920 Bacteria 2425
217 Ga0496118_0010176 3300048921 Bacteria 9344
218 Ga0496121_0034422 3300048924 Bacteria 4560
219 Ga0496121_0040454 3300048924 Bacteria 4089
220 Ga0496126_0000072 3300048929 Bacteria 238130
221 Ga0501032_0017345 3300049569 Bacteria 5055
222 Ga0501038_0000899 3300049574 Bacteria 26339
223 Ga0501048_0000934 3300049582 Bacteria 21582
224 Ga0501070_0008828 3300049586 Bacteria 8520
225 Ga0501035_0002090 3300049822 Bacteria 19866
226 Ga0501035_0079930 3300049822 Bacteria 2887
227 Ga0501044_0036900 3300049823 Bacteria 5111
228 Ga0501044_0072108 3300049823 Bacteria 3512
229 nmdc:mga09592_217560_c1 3300050508 Bacteria 1655
230 nmdc:mga08y16_1460_c1 3300050511 Bacteria 23696
231 nmdc:mga0n895_10350_c1 3300050512 Bacteria 8230
232 nmdc:mga0n895_23550_c1 3300050512 Bacteria 5789
233 nmdc:mga0n895_7031_c1 3300050512 Bacteria 9614
234 nmdc:mga0rr50_2843_c1 3300050513 Bacteria 9847
235 nmdc:mga08x19_1262_c1 3300050514 Bacteria 15701
236 nmdc:mga08x19_22413_c1 3300050514 Bacteria 3912
237 nmdc:mga0a205_5269_c1 3300050515 Bacteria 11647
238 nmdc:mga0a205_6603_c1 3300050515 Bacteria 10494
239 Ga0495601_0000461 3300053077 Bacteria 21375
240 Ga0495601_0008412 3300053077 Bacteria 6096
241 Ga0495612_0005606 3300053078 Bacteria 5190
242 Ga0466962_0006759 3300061719 Bacteria 5501
243 2643826576 2643221561 Bacteria 4984412
244 2740167809 2739367898 Bacteria 4367674
245 Ga0070700_100000007
246 rootH2_10196542
247 rootL2_10173480
248 JGI25407J50210_10001614
249 Ga0070658_10019508
250 Ga0070658_10104292
251 Ga0070670_100031973
252 Ga0068869_100069592
253 Ga0070680_100013498
254 Ga0070682_100010621
255 Ga0068868_100075423
256 Ga0070660_100014123
257 Ga0070691_10016029
258 Ga0070668_100044324
259 Ga0070675_100020874
260 Ga0070671_100005402
261 Ga0070659_100021147
262 Ga0070667_100019546
263 Ga0070709_10005858
264 Ga0070714_100043437
265 Ga0070713_100070393
266 Ga0070701_10012229
267 Ga0070705_100030804
268 Ga0070700_100018921
269 Ga0070663_100085094
270 Ga0070662_100015223
271 Ga0070679_100006502
272 Ga0070684_100064664
273 Ga0070693_100006760
274 Ga0070665_100275148
275 Ga0070664_100027185
276 Ga0068856_100072478
277 Ga0068852_100030501
278 Ga0068859_100000409
279 Ga0068866_10008014
280 Ga0068870_10000435
281 Ga0068863_100004571
282 Ga0068863_100010169
283 Ga0068863_100152934
284 Ga0068858_100006043
285 Ga0068858_100028835
286 Ga0068860_100000102
287 Ga0081455_10000386
288 Ga0081455_10003349
289 Ga0081455_10004318
290 Ga0081455_10018397
291 Ga0081538_10000025
292 Ga0081540_1001693
293 Ga0070717_10056764
294 Ga0075365_10011913
295 Ga0075432_10000011
296 Ga0075432_10004174
297 Ga0075367_10023840
298 Ga0075428_100005344
299 Ga0075428_100060961
300 Ga0075428_100116721
301 Ga0075431_100027712
302 Ga0075433_10001096
303 Ga0075433_10001469
304 Ga0075434_100004371
305 Ga0075434_100057435
306 Ga0068865_100065097
307 Ga0075436_100002674
308 Ga0097620_100000409
309 Ga0075435_100000387
310 Ga0075435_100001615
311 Ga0075435_100011777
312 Ga0111539_10000029
313 Ga0111539_10042388
314 Ga0114129_10014587
315 Ga0114129_10149177
316 Ga0114129_10316616
317 Ga0105243_10037275
318 Ga0105248_10093294
319 Ga0105238_10044887
320 Ga0105249_10008590
321 Ga0105249_10042964
322 Ga0105249_10156798
323 Ga0105239_10080510
324 Ga0105246_10025909
325 Ga0157341_1000088
326 Ga0157371_10005046
327 Ga0157369_10022123
328 Ga0157374_10060785
329 Ga0157372_10025901
330 Ga0157372_10204802
331 Ga0157375_10109852
332 Ga0163163_10021569
333 Ga0157380_10223216
334 Ga0182008_10053442
335 Ga0157376_10074680
336 Ga0206353_11285007
337 Ga0206353_11896707
338 Ga0207688_10007128
339 Ga0207688_10025239
340 Ga0207680_10109174
341 Ga0207699_10059480
342 Ga0207643_10003063
343 Ga0207695_10116006
344 Ga0207657_10039099
345 Ga0207652_10027375
346 Ga0207694_10074450
347 Ga0207650_10002852
348 Ga0207690_10026222
349 Ga0207690_10058167
350 Ga0207706_10023864
351 Ga0207706_10051592
352 Ga0207709_10082686
353 Ga0207704_10030407
354 Ga0207665_10149402
355 Ga0207711_10042971
356 Ga0207689_10013228
357 Ga0207661_10003920
358 Ga0207661_10004263
359 Ga0207679_10046953
360 Ga0207667_10118729
361 Ga0207668_10071168
362 Ga0207640_10046071
363 Ga0207658_10032583
364 Ga0207677_10012727
365 Ga0207703_10001645
366 Ga0207678_10068913
367 Ga0207708_10000006
368 Ga0207702_10051321
369 Ga0207702_10111893
370 Ga0207641_10026783
371 Ga0207641_10064280
372 Ga0207676_10005362
373 Ga0207676_10245147
374 Ga0207674_10020410
375 Ga0207674_10113880
376 Ga0207675_100011296
377 Ga0207675_100037858
378 Ga0207683_10002283
379 Ga0207698_10104680
380 Ga0207428_10000496
381 Ga0207428_10000730
382 Ga0268264_10000171
383 Ga0268264_10170356
384 Ga0307408_100009747
385 Ga0307405_10014023
386 Ga0307405_10017323
387 Ga0307413_10000596
388 Ga0307413_10005752
389 Ga0307410_10002149
390 Ga0307410_10067127
391 Ga0307406_10000474
392 Ga0307407_10002826
393 Ga0307409_100001967
394 Ga0307409_100026876
395 Ga0307409_100093271
396 Ga0307416_100001105
397 Ga0307416_100038660
398 Ga0307416_100045040
399 Ga0307414_10014977
400 Ga0307414_10033272
401 Ga0307411_10017446
402 Ga0307415_100033988
403 Ga0307415_100094872
404 Ga0436365_1831378
405 Ga0439463_015656
406 Ga0439435_0005333
407 Ga0439444_0003205
408 Ga0439464_0024930
409 Ga0439460_0005293
410 Ga0439440_0001089
411 Ga0466969_0004497
412 Ga0466969_0040218
413 Ga0466972_0015279
414 Ga0466972_0049928
415 Ga0466965_0028058
416 Ga0466966_0056215
417 Ga0466961_0000445
418 Ga0466961_0006323
419 Ga0466961_0011008
420 Ga0466971_0009393
421 Ga0466971_0042220
422 Ga0466970_0007949
423 Ga0466970_0008944
424 Ga0466957_0032215
425 Ga0466959_0003616
426 Ga0466959_0181719
427 Ga0466958_0017317
428 Ga0466967_0001368
429 Ga0466967_0048381
430 Ga0495629_0116388
431 Ga0495651_0043546
432 Ga0495618_0014518
433 Ga0495628_0116544
434 Ga0495652_0001952
435 Ga0495645_0166559
436 Ga0495656_0040560
437 Ga0495635_0004968
438 Ga0495599_0046330
439 Ga0495623_0012780
440 Ga0495613_0059760
441 Ga0496100_0034257
442 Ga0496102_0000090
443 Ga0496102_0013078
444 Ga0496102_0062523
445 Ga0496103_0000034
446 Ga0496104_0118791
447 Ga0496105_0072841
448 Ga0496105_0128377
449 Ga0496106_0028226
450 Ga0496108_0103302
451 Ga0496109_0003515
452 Ga0496109_0144291
453 Ga0496110_0004971
454 Ga0496111_0003812
455 Ga0496112_0026936
456 Ga0496112_0053089
457 Ga0496112_0184900
458 Ga0496113_0023552
459 Ga0496114_0015166
460 Ga0496117_0067284
461 Ga0496118_0010176
462 Ga0496121_0034422
463 Ga0496121_0040454
464 Ga0496126_0000072
465 Ga0501032_0017345
466 Ga0501038_0000899
467 Ga0501048_0000934
468 Ga0501070_0008828
469 Ga0501035_0002090
470 Ga0501035_0079930
471 Ga0501044_0036900
472 Ga0501044_0072108
473 nmdc:mga09592_217560_c1
474 nmdc:mga08y16_1460_c1
475 nmdc:mga0n895_10350_c1
476 nmdc:mga0n895_23550_c1
477 nmdc:mga0n895_7031_c1
478 nmdc:mga0rr50_2843_c1
479 nmdc:mga08x19_1262_c1
480 nmdc:mga08x19_22413_c1
481 nmdc:mga0a205_5269_c1
482 nmdc:mga0a205_6603_c1
483 Ga0495601_0000461
484 Ga0495601_0008412
485 Ga0495612_0005606
486 Ga0466962_0006759
487 2643826576
488 2740167809

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18614

RNase_II_C_S1

RNase II-type exonuclease C-terminal S1 domain

446

503

0.95

PF00773

RNB

RNB domain

83

398

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7did-assembly1.cif.gz_A mycoplasma genitalium rnase r in complex with ribose methylated single-stranded rna 0.8646 34 504
7dcy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8592 34 500
5k36-assembly1.cif.gz_K structure of an eleven component nuclear rna exosome complex bound to rna 0.8544 29 493
5c0x-assembly1.cif.gz_J structure of a 12-subunit nuclear exosome complex bound to structured rna 0.8532 39 504
5xgu-assembly1.cif.gz_A escherichia coli. rnase r 0.8452 33 504
ID Description Score Start End Superfamily
af_Q54C56_596_833_1.20.900.10 Mainly Alpha;Up-down Bundle;Dbl Homology Domain; Chain A;Dbl homology (DH) domain 0.5037 370 436 1.20.900.10
af_F4KHD8_1143_1225_2.60.40.1380 Mainly Beta;Sandwich;Immunoglobulin-like;E set domains; domain 4 0.4973 147 188 2.60.40.1380
af_Q7XW19_73_438_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.4811 84 187 2.130.10.10
af_Q4D1I5_145_462_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.4802 97 255 2.130.10.10
af_A0A1P8BB23_1_78_2.20.25.80 Mainly Beta;Single Sheet;N-terminal domain of TfIIb;WRKY domain 0.4667 92 187 2.20.25.80
ID Description Score Start End GO Terms
AF-A0A4R5CCE9-F1-model_v4 RNB domain-containing ribonuclease 0.9706 36 500 GO:0003723
GO:0004540
GO:0006402
AF-A0A7Y5UDR2-F1-model_v4 deleted 0.97 71 501
AF-A0A7V8YWK9-F1-model_v4 RNB domain-containing ribonuclease 0.9634 36 466 GO:0003723
GO:0004540
GO:0005829
GO:0006402
AF-A0A7Y5UDR2-F1-model_v4 deleted 0.9611 71 501
AF-A0A853AXF6-F1-model_v4 Exoribonuclease R 0.9573 38 501 GO:0000175
GO:0000932
GO:0003723
GO:0006402

Map