F356250

General Info

Members Datasets Scaffolds Average Seq Length
244 172 488 260

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10045950|Ga0070709_100459505
Length 286
Sequence MTEWDAAEYSRRSSLQEAMAQEVLALLDLKSSERILDVGCGDGKITAQIASRASKGSVVGVDPSRDMISFARRHFGPAMLPNLRFEVADARRLPFKNEFDLVVSFNALHWISEQQTALSSIRSTLVSGAKAQLRLVSKGARKSLENVAEETRRTSRWKAYFQDFEDPYLHLTAEEYAALAERSGFRVLHVSIKDHSWDFGSRLAFSGFSAVGCVAWTSRLPAAERMDFINDVLDHYQEVAGDHSGEENTFKFYQMDISLLAISEKRSPIGEKPGSENSKRNQSQPR

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
67 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
68 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
102 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
115 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
134 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
163 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
164 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
165 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
166 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 2643221692 Nocardia sp. Root136 Isolate Unclassified
168 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
169 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
170 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
171 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
172 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.13
Metatranscriptomes 0.41
Isolates 2.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.46
Nodule 0
Rhizoplane 5.74
Rhizosphere 86.48
Stem 0
Stem Tuber 0
Unclassified 21.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10045950 3300005434 Bacteria 2713
2 Ga0065715_10022600 3300005293 Bacteria 1662
3 Ga0065715_10144529 3300005293 Unclassified 1806
4 Ga0070658_10062190 3300005327 Bacteria 3042
5 Ga0070676_10045084 3300005328 Unclassified 2567
6 Ga0070690_100046214 3300005330 Bacteria 2767
7 Ga0070666_10090586 3300005335 Unclassified 2101
8 Ga0070666_10091822 3300005335 Bacteria 2086
9 Ga0070680_100625643 3300005336 Bacteria 924
10 Ga0070682_100189567 3300005337 Bacteria 1443
11 Ga0068868_100391956 3300005338 Bacteria 1197
12 Ga0070660_100612257 3300005339 Unclassified 911
13 Ga0070668_100435544 3300005347 Unclassified 1124
14 Ga0070675_100207913 3300005354 Unclassified 1700
15 Ga0070671_100019913 3300005355 Bacteria 5467
16 Ga0070671_100059232 3300005355 Bacteria 3187
17 Ga0070671_100138967 3300005355 Bacteria 2049
18 Ga0070674_100231341 3300005356 Bacteria 1443
19 Ga0070673_100188338 3300005364 Unclassified 1771
20 Ga0070667_100210571 3300005367 Bacteria 1727
21 Ga0070713_100091179 3300005436 Bacteria 2621
22 Ga0070710_10010519 3300005437 Bacteria 4547
23 Ga0070710_10055926 3300005437 Bacteria 2231
24 Ga0070710_10144255 3300005437 Bacteria 1463
25 Ga0070711_100060343 3300005439 Bacteria 2636
26 Ga0070711_100148282 3300005439 Unclassified 1766
27 Ga0070705_100140889 3300005440 Bacteria 1587
28 Ga0070708_100010986 3300005445 Bacteria 7357
29 Ga0070663_100024267 3300005455 Bacteria 4078
30 Ga0070678_100106095 3300005456 Unclassified 2188
31 Ga0070678_100155115 3300005456 Bacteria 1849
32 Ga0068867_100591092 3300005459 Bacteria 967
33 Ga0070706_100174896 3300005467 Bacteria 2004
34 Ga0070707_100083082 3300005468 Bacteria 3094
35 Ga0070698_100007409 3300005471 Bacteria 11873
36 Ga0070698_100022143 3300005471 Bacteria 6653
37 Ga0070672_100051428 3300005543 Unclassified 3213
38 Ga0070696_100056716 3300005546 Unclassified 2732
39 Ga0070665_100056053 3300005548 Bacteria 3952
40 Ga0070665_100140928 3300005548 Bacteria 2414
41 Ga0070665_100490914 3300005548 Bacteria 1239
42 Ga0070704_100125149 3300005549 Bacteria 1982
43 Ga0068856_100583262 3300005614 Bacteria 1139
44 Ga0068863_100001106 3300005841 Bacteria 26950
45 Ga0068863_100025662 3300005841 Bacteria 5620
46 Ga0068863_100206745 3300005841 Bacteria 1889
47 Ga0068863_100429209 3300005841 Bacteria 1295
48 Ga0068860_100737598 3300005843 Bacteria 996
49 Ga0068862_100074683 3300005844 Bacteria 2931
50 Ga0081455_10014605 3300005937 Bacteria 7685
51 Ga0081455_10246454 3300005937 Bacteria 1310
52 Ga0081538_10007785 3300005981 Bacteria 9202
53 Ga0081539_10076311 3300005985 Unclassified 1776
54 Ga0081539_10175681 3300005985 Bacteria 1008
55 Ga0070717_10003084 3300006028 Bacteria 11883
56 Ga0070717_10079317 3300006028 Bacteria 2752
57 Ga0070717_10128846 3300006028 Unclassified 2174
58 Ga0070717_10335520 3300006028 Bacteria 1349
59 Ga0070716_100055249 3300006173 Unclassified 2271
60 Ga0070712_100237466 3300006175 Bacteria 1450
61 Ga0075369_10060198 3300006186 Bacteria 1656
62 Ga0097621_100257634 3300006237 Unclassified 1529
63 Ga0075430_100269242 3300006846 Bacteria 1410
64 Ga0075431_100532027 3300006847 Unclassified 1164
65 Ga0075433_10289149 3300006852 Bacteria 1452
66 Ga0075434_100191785 3300006871 Bacteria 2064
67 Ga0075434_100321191 3300006871 Bacteria 1569
68 Ga0075434_100445462 3300006871 Bacteria 1316
69 Ga0068865_100023157 3300006881 Bacteria 4063
70 Ga0099795_10021150 3300007788 Bacteria 2130
71 Ga0111539_10180395 3300009094 Unclassified 2466
72 Ga0111539_10545874 3300009094 Bacteria 1350
73 Ga0114129_11120457 3300009147 Unclassified 984
74 Ga0105243_10107006 3300009148 Bacteria 2332
75 Ga0105242_10515795 3300009176 Unclassified 1139
76 Ga0105248_10044808 3300009177 Bacteria 4962
77 Ga0105248_10113123 3300009177 Bacteria 3061
78 Ga0105248_10937635 3300009177 Bacteria 978
79 Ga0105248_10955513 3300009177 Unclassified 968
80 Ga0105246_10096381 3300011119 Bacteria 2144
81 Ga0157369_10290824 3300013105 Unclassified 1701
82 Ga0157374_10034580 3300013296 Bacteria 4617
83 Ga0163162_10244524 3300013306 Bacteria 1926
84 Ga0157372_10158555 3300013307 Bacteria 2614
85 Ga0157375_10065721 3300013308 Unclassified 3617
86 Ga0157375_10074884 3300013308 Bacteria 3408
87 Ga0157375_10698732 3300013308 Unclassified 1168
88 Ga0157375_10811630 3300013308 Bacteria 1084
89 Ga0163163_10039420 3300014325 Bacteria 4610
90 Ga0163163_10100936 3300014325 Unclassified 2908
91 Ga0163163_11081089 3300014325 Unclassified 865
92 Ga0157379_10257271 3300014968 Unclassified 1586
93 Ga0157376_10584702 3300014969 Unclassified 1109
94 Ga0163161_10064396 3300017792 Bacteria 2674
95 Ga0213872_10002924 3300021361 Bacteria 9701
96 Ga0213872_10028498 3300021361 Unclassified 2560
97 Ga0213874_10050703 3300021377 Unclassified 1272
98 Ga0213871_10001480 3300021441 Bacteria 3956
99 Ga0207673_1001634 3300025290 Bacteria 2475
100 Ga0209051_1011700 3300025303 Bacteria 4309
101 Ga0207697_10004889 3300025315 Bacteria 6319
102 Ga0207697_10009003 3300025315 Bacteria 4331
103 Ga0207688_10066589 3300025901 Bacteria 2037
104 Ga0207688_10178329 3300025901 Unclassified 1266
105 Ga0207680_10007216 3300025903 Bacteria 5404
106 Ga0207680_10144866 3300025903 Bacteria 1578
107 Ga0207647_10003665 3300025904 Bacteria 11490
108 Ga0207699_10283323 3300025906 Bacteria 1152
109 Ga0207645_10001867 3300025907 Bacteria 17003
110 Ga0207645_10023182 3300025907 Unclassified 4034
111 Ga0207643_10158699 3300025908 Bacteria 1360
112 Ga0207684_10000347 3300025910 Bacteria 64001
113 Ga0207684_10086068 3300025910 Bacteria 2677
114 Ga0207684_10143375 3300025910 Unclassified 2054
115 Ga0207671_10135104 3300025914 Bacteria 1896
116 Ga0207693_10072388 3300025915 Bacteria 2699
117 Ga0207693_10256617 3300025915 Bacteria 1371
118 Ga0207663_10074780 3300025916 Unclassified 2196
119 Ga0207663_10293753 3300025916 Bacteria 1211
120 Ga0207657_10170345 3300025919 Bacteria 1764
121 Ga0207657_10404096 3300025919 Unclassified 1074
122 Ga0207649_10166300 3300025920 Bacteria 1532
123 Ga0207646_10053561 3300025922 Bacteria 3609
124 Ga0207646_10170409 3300025922 Bacteria 1966
125 Ga0207681_10037456 3300025923 Bacteria 3206
126 Ga0207650_10386048 3300025925 Unclassified 1157
127 Ga0207687_10099882 3300025927 Bacteria 2133
128 Ga0207700_10645972 3300025928 Unclassified 943
129 Ga0207664_10138444 3300025929 Bacteria 2056
130 Ga0207644_10004126 3300025931 Bacteria 9418
131 Ga0207644_10286938 3300025931 Bacteria 1323
132 Ga0207644_10380181 3300025931 Unclassified 1151
133 Ga0207665_10004831 3300025939 Bacteria 8972
134 Ga0207665_10107814 3300025939 Bacteria 1953
135 Ga0207691_10003778 3300025940 Bacteria 14703
136 Ga0207711_10052448 3300025941 Bacteria 3495
137 Ga0207658_10012864 3300025986 Bacteria 5715
138 Ga0207658_10041030 3300025986 Bacteria 3349
139 Ga0207677_10645427 3300026023 Unclassified 934
140 Ga0207641_10002305 3300026088 Bacteria 17740
141 Ga0207641_10023187 3300026088 Bacteria 5114
142 Ga0207648_10165377 3300026089 Bacteria 1955
143 Ga0207648_10179117 3300026089 Bacteria 1876
144 Ga0207675_100978655 3300026118 Bacteria 864
145 Ga0207683_10032022 3300026121 Unclassified 4566
146 Ga0207683_10042639 3300026121 Bacteria 3963
147 Ga0207683_10060201 3300026121 Bacteria 3337
148 Ga0268266_10024978 3300028379 Bacteria 5085
149 Ga0268266_10214557 3300028379 Bacteria 1766
150 Ga0268265_10226070 3300028380 Bacteria 1641
151 Ga0373939_0042724 3300035114 Bacteria 1372
152 Ga0373945_0010529 3300035116 Bacteria 3047
153 Ga0373925_0190311 3300037068 Unclassified 1628
154 Ga0395900_0472790 3300037418 Bacteria 1207
155 Ga0395898_0178884 3300037466 Unclassified 2027
156 Ga0395905_0252987 3300037471 Bacteria 1646
157 Ga0436364_1329609 3300037853 Bacteria 7262
158 Ga0436364_1558052 3300037853 Unclassified 1362
159 Ga0395901_0012543 3300038443 Bacteria 8600
160 Ga0395901_0283762 3300038443 Bacteria 1720
161 Ga0436365_0139528 3300039437 Bacteria 1578
162 Ga0436365_0375986 3300039437 Bacteria 8101
163 Ga0436360_0217899 3300039438 Bacteria 8514
164 Ga0436360_0240612 3300039438 Bacteria 3950
165 Ga0436361_0465782 3300039447 Bacteria 16437
166 Ga0436361_0592022 3300039447 Archaea 5243
167 Ga0436363_0233133 3300039450 Unclassified 2887
168 Ga0436362_0261617 3300039453 Unclassified 1075
169 Ga0451853_3394321 3300041512 Bacteria 1211
170 Ga0466958_0083123 3300045836 Unclassified 1973
171 Ga0495603_0158940 3300046455 Bacteria 1311
172 Ga0495638_0004348 3300046460 Bacteria 10736
173 Ga0495653_0073746 3300046463 Bacteria 2546
174 Ga0495580_0000741 3300046472 Bacteria 27965
175 Ga0495606_0033417 3300046507 Bacteria 3548
176 Ga0495608_0222759 3300046511 Bacteria 1183
177 Ga0495628_0275370 3300046516 Bacteria 1251
178 Ga0495642_0228894 3300046528 Bacteria 812
179 Ga0495668_0000296 3300046616 Bacteria 68521
180 Ga0495625_0005686 3300046660 Bacteria 11295
181 Ga0495625_0245451 3300046660 Bacteria 1164
182 Ga0495658_0107977 3300046683 Bacteria 1670
183 Ga0495649_0311333 3300046694 Bacteria 800
184 Ga0495674_0064925 3300047319 Bacteria 3172
185 Ga0495674_0299895 3300047319 Bacteria 1313
186 Ga0495672_0012260 3300047320 Bacteria 5995
187 Ga0495676_0337429 3300047321 Unclassified 1010
188 Ga0495683_0048021 3300047323 Bacteria 2141
189 Ga0495684_0182903 3300047471 Unclassified 1553
190 Ga0495593_0239685 3300047673 Unclassified 909
191 Ga0495626_0001462 3300048091 Bacteria 18655
192 Ga0496101_0003505 3300048904 Bacteria 9788
193 Ga0496102_0227509 3300048905 Bacteria 1759
194 Ga0496104_0645151 3300048907 Unclassified 968
195 Ga0496105_0147561 3300048908 Bacteria 1934
196 Ga0496106_0004502 3300048909 Bacteria 10329
197 Ga0496107_0047616 3300048910 Bacteria 3087
198 Ga0496108_0046457 3300048911 Bacteria 3628
199 Ga0496108_0553312 3300048911 Unclassified 1004
200 Ga0496109_0080991 3300048912 Bacteria 2992
201 Ga0496109_0140805 3300048912 Bacteria 2255
202 Ga0496109_0239067 3300048912 Bacteria 1709
203 Ga0496114_0305635 3300048917 Bacteria 1404
204 Ga0496115_0231054 3300048918 Bacteria 1525
205 Ga0496115_0455551 3300048918 Bacteria 1033
206 Ga0496126_0002723 3300048929 Bacteria 23359
207 Ga0496126_0346277 3300048929 Bacteria 1216
208 Ga0501036_0089874 3300049572 Bacteria 2595
209 Ga0501038_0208978 3300049574 Bacteria 1562
210 Ga0501043_0016424 3300049579 Bacteria 5804
211 Ga0501047_0076713 3300049581 Bacteria 3216
212 Ga0501047_0167178 3300049581 Bacteria 2070
213 Ga0501070_0020221 3300049586 Bacteria 5583
214 Ga0501070_0414100 3300049586 Bacteria 1089
215 Ga0501070_0566707 3300049586 Bacteria 908
216 Ga0501073_0013012 3300049589 Bacteria 6067
217 Ga0501074_0001728 3300049590 Bacteria 14921
218 Ga0501074_0004828 3300049590 Bacteria 9660
219 Ga0501076_0233179 3300049592 Bacteria 1505
220 Ga0501076_0404841 3300049592 Bacteria 1122
221 Ga0501080_0014364 3300049742 Bacteria 7291
222 Ga0501080_0293280 3300049742 Bacteria 1476
223 Ga0501035_0003545 3300049822 Bacteria 14903
224 Ga0501035_0035399 3300049822 Bacteria 4531
225 Ga0501035_0100174 3300049822 Bacteria 2543
226 Ga0501044_0063306 3300049823 Bacteria 3779
227 Ga0501044_0067881 3300049823 Bacteria 3633
228 Ga0501044_0070078 3300049823 Bacteria 3568
229 nmdc:mga0qj67_174763_c1 3300050509 Bacteria 1744
230 nmdc:mga06r32_518386_c1 3300050510 Unclassified 1168
231 nmdc:mga08y16_587303_c1 3300050511 Unclassified 1124
232 nmdc:mga0n895_190458_c1 3300050512 Bacteria 2082
233 nmdc:mga0a205_197364_c1 3300050515 Bacteria 1903
234 Ga0500635_0040604 3300053080 Bacteria 1553
235 Ga0500643_006746 3300053087 Bacteria 4743
236 Ga0500627_0006317 3300053158 Bacteria 4025
237 Ga0500645_000006 3300053730 Bacteria 276677
238 Ga0587111_0005909 3300060346 Unclassified 1914
239 2644515879 2643221692 Bacteria 7282860
240 2738704361 2738541274 Bacteria 6909446
241 2739331156 2738543028 Bacteria 6917070
242 2887482649 2887478801 Bacteria 8972725
243 2902799525 2902799365 Bacteria 5419524
244 8001787666 8001781756 Bacteria 9586736
245 Ga0070709_10045950
246 Ga0065715_10022600
247 Ga0065715_10144529
248 Ga0070658_10062190
249 Ga0070676_10045084
250 Ga0070690_100046214
251 Ga0070666_10090586
252 Ga0070666_10091822
253 Ga0070680_100625643
254 Ga0070682_100189567
255 Ga0068868_100391956
256 Ga0070660_100612257
257 Ga0070668_100435544
258 Ga0070675_100207913
259 Ga0070671_100019913
260 Ga0070671_100059232
261 Ga0070671_100138967
262 Ga0070674_100231341
263 Ga0070673_100188338
264 Ga0070667_100210571
265 Ga0070713_100091179
266 Ga0070710_10010519
267 Ga0070710_10055926
268 Ga0070710_10144255
269 Ga0070711_100060343
270 Ga0070711_100148282
271 Ga0070705_100140889
272 Ga0070708_100010986
273 Ga0070663_100024267
274 Ga0070678_100106095
275 Ga0070678_100155115
276 Ga0068867_100591092
277 Ga0070706_100174896
278 Ga0070707_100083082
279 Ga0070698_100007409
280 Ga0070698_100022143
281 Ga0070672_100051428
282 Ga0070696_100056716
283 Ga0070665_100056053
284 Ga0070665_100140928
285 Ga0070665_100490914
286 Ga0070704_100125149
287 Ga0068856_100583262
288 Ga0068863_100001106
289 Ga0068863_100025662
290 Ga0068863_100206745
291 Ga0068863_100429209
292 Ga0068860_100737598
293 Ga0068862_100074683
294 Ga0081455_10014605
295 Ga0081455_10246454
296 Ga0081538_10007785
297 Ga0081539_10076311
298 Ga0081539_10175681
299 Ga0070717_10003084
300 Ga0070717_10079317
301 Ga0070717_10128846
302 Ga0070717_10335520
303 Ga0070716_100055249
304 Ga0070712_100237466
305 Ga0075369_10060198
306 Ga0097621_100257634
307 Ga0075430_100269242
308 Ga0075431_100532027
309 Ga0075433_10289149
310 Ga0075434_100191785
311 Ga0075434_100321191
312 Ga0075434_100445462
313 Ga0068865_100023157
314 Ga0099795_10021150
315 Ga0111539_10180395
316 Ga0111539_10545874
317 Ga0114129_11120457
318 Ga0105243_10107006
319 Ga0105242_10515795
320 Ga0105248_10044808
321 Ga0105248_10113123
322 Ga0105248_10937635
323 Ga0105248_10955513
324 Ga0105246_10096381
325 Ga0157369_10290824
326 Ga0157374_10034580
327 Ga0163162_10244524
328 Ga0157372_10158555
329 Ga0157375_10065721
330 Ga0157375_10074884
331 Ga0157375_10698732
332 Ga0157375_10811630
333 Ga0163163_10039420
334 Ga0163163_10100936
335 Ga0163163_11081089
336 Ga0157379_10257271
337 Ga0157376_10584702
338 Ga0163161_10064396
339 Ga0213872_10002924
340 Ga0213872_10028498
341 Ga0213874_10050703
342 Ga0213871_10001480
343 Ga0207673_1001634
344 Ga0209051_1011700
345 Ga0207697_10004889
346 Ga0207697_10009003
347 Ga0207688_10066589
348 Ga0207688_10178329
349 Ga0207680_10007216
350 Ga0207680_10144866
351 Ga0207647_10003665
352 Ga0207699_10283323
353 Ga0207645_10001867
354 Ga0207645_10023182
355 Ga0207643_10158699
356 Ga0207684_10000347
357 Ga0207684_10086068
358 Ga0207684_10143375
359 Ga0207671_10135104
360 Ga0207693_10072388
361 Ga0207693_10256617
362 Ga0207663_10074780
363 Ga0207663_10293753
364 Ga0207657_10170345
365 Ga0207657_10404096
366 Ga0207649_10166300
367 Ga0207646_10053561
368 Ga0207646_10170409
369 Ga0207681_10037456
370 Ga0207650_10386048
371 Ga0207687_10099882
372 Ga0207700_10645972
373 Ga0207664_10138444
374 Ga0207644_10004126
375 Ga0207644_10286938
376 Ga0207644_10380181
377 Ga0207665_10004831
378 Ga0207665_10107814
379 Ga0207691_10003778
380 Ga0207711_10052448
381 Ga0207658_10012864
382 Ga0207658_10041030
383 Ga0207677_10645427
384 Ga0207641_10002305
385 Ga0207641_10023187
386 Ga0207648_10165377
387 Ga0207648_10179117
388 Ga0207675_100978655
389 Ga0207683_10032022
390 Ga0207683_10042639
391 Ga0207683_10060201
392 Ga0268266_10024978
393 Ga0268266_10214557
394 Ga0268265_10226070
395 Ga0373939_0042724
396 Ga0373945_0010529
397 Ga0373925_0190311
398 Ga0395900_0472790
399 Ga0395898_0178884
400 Ga0395905_0252987
401 Ga0436364_1329609
402 Ga0436364_1558052
403 Ga0395901_0012543
404 Ga0395901_0283762
405 Ga0436365_0139528
406 Ga0436365_0375986
407 Ga0436360_0217899
408 Ga0436360_0240612
409 Ga0436361_0465782
410 Ga0436361_0592022
411 Ga0436363_0233133
412 Ga0436362_0261617
413 Ga0451853_3394321
414 Ga0466958_0083123
415 Ga0495603_0158940
416 Ga0495638_0004348
417 Ga0495653_0073746
418 Ga0495580_0000741
419 Ga0495606_0033417
420 Ga0495608_0222759
421 Ga0495628_0275370
422 Ga0495642_0228894
423 Ga0495668_0000296
424 Ga0495625_0005686
425 Ga0495625_0245451
426 Ga0495658_0107977
427 Ga0495649_0311333
428 Ga0495674_0064925
429 Ga0495674_0299895
430 Ga0495672_0012260
431 Ga0495676_0337429
432 Ga0495683_0048021
433 Ga0495684_0182903
434 Ga0495593_0239685
435 Ga0495626_0001462
436 Ga0496101_0003505
437 Ga0496102_0227509
438 Ga0496104_0645151
439 Ga0496105_0147561
440 Ga0496106_0004502
441 Ga0496107_0047616
442 Ga0496108_0046457
443 Ga0496108_0553312
444 Ga0496109_0080991
445 Ga0496109_0140805
446 Ga0496109_0239067
447 Ga0496114_0305635
448 Ga0496115_0231054
449 Ga0496115_0455551
450 Ga0496126_0002723
451 Ga0496126_0346277
452 Ga0501036_0089874
453 Ga0501038_0208978
454 Ga0501043_0016424
455 Ga0501047_0076713
456 Ga0501047_0167178
457 Ga0501070_0020221
458 Ga0501070_0414100
459 Ga0501070_0566707
460 Ga0501073_0013012
461 Ga0501074_0001728
462 Ga0501074_0004828
463 Ga0501076_0233179
464 Ga0501076_0404841
465 Ga0501080_0014364
466 Ga0501080_0293280
467 Ga0501035_0003545
468 Ga0501035_0035399
469 Ga0501035_0100174
470 Ga0501044_0063306
471 Ga0501044_0067881
472 Ga0501044_0070078
473 nmdc:mga0qj67_174763_c1
474 nmdc:mga06r32_518386_c1
475 nmdc:mga08y16_587303_c1
476 nmdc:mga0n895_190458_c1
477 nmdc:mga0a205_197364_c1
478 Ga0500635_0040604
479 Ga0500643_006746
480 Ga0500627_0006317
481 Ga0500645_000006
482 Ga0587111_0005909
483 2644515879
484 2738704361
485 2739331156
486 2887482649
487 2902799525
488 8001787666

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

36

132

0.95

PF13649

Methyltransf_25

Methyltransferase domain

35

128

0.93

PF08242

Methyltransf_12

Methyltransferase domain

36

131

0.92

PF01135

PCMT

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

7

102

0.88

PF05175

MTS

Methyltransferase small domain

17

188

0.87

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

16

150

0.86

PF13489

Methyltransf_23

Methyltransferase domain

11

190

0.85

PF13847

Methyltransf_31

Methyltransferase domain

29

183

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ccf-assembly1.cif.gz_A crystal structure of putative methyltransferase (yp_321342.1) from anabaena variabilis atcc 29413 at 1.90 a resolution 0.8411 21 261
3ccf-assembly1.cif.gz_A crystal structure of putative methyltransferase (yp_321342.1) from anabaena variabilis atcc 29413 at 1.90 a resolution 0.815 21 261
1dl5-assembly1.cif.gz_A protein-l-isoaspartate o-methyltransferase 0.8138 16 135
7wm6-assembly1.cif.gz_B crystal structure of sah-bound trmm from mycoplasma capricolum 0.8101 19 190
2pjd-assembly1.cif.gz_A crystal structure of 16s rrna methyltransferase rsmc 0.8085 19 136
ID Description Score Start End Superfamily
af_Q9P3E7_8_144_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8814 33 142 3.40.50.150
af_K7KE15_1_124_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8754 20 142 3.40.50.150
af_K7KE15_1_124_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8627 20 142 3.40.50.150
af_A0A0R0HV62_55_242_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8606 17 137 3.40.50.150
af_A0A368UJQ1_51_373_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.857 18 103 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A536VRK7-F1-model_v4 Class I SAM-dependent methyltransferase 0.9288 17 129 GO:0008168
GO:0032259
AF-Q60A72-F1-model_v4 Putative methyltransferase 0.9212 1 260 GO:0008168
GO:0032259
AF-Q60A72-F1-model_v4 Putative methyltransferase 0.9145 1 260 GO:0008168
GO:0032259
AF-A0A1M3BDH2-F1-model_v4 Methyltransferase domain-containing protein 0.9094 1 260
AF-A0A3D6B6R0-F1-model_v4 SAM-dependent methyltransferase 0.8981 1 260 GO:0030798
GO:0032259

Map