F356173

General Info

Members Datasets Scaffolds Average Seq Length
244 171 488 306

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10060492|Ga0070658_100604923
Length 334
Sequence MVEQSHPVDQPVRIVFMGTPDFAVPTLQALVENAQVRDVWPAGLELVGVVTRPDKPVGRGLQTVYSPVKQYAMQVGLPVLQMRSLRWPDTQGTLRELEPDLIIVAAFGQILPREVLEMPAHGCLNAHASLLPRWRGAAPIAAAIRAGDAETGITIMRMEEGLDTGAIVSARATLIGDGETTGGLTARLARLAAELLLETLPNWLGGGITPTPQDEAEATMTRPLRKEDGRLDFQRPAVELARQIRSMTPWPGAFTTWQGKLLKIHAAEPIAREQELAAGTCYPLAAGDTRGALACACGEGALALKVIQLEGKRPVPSADALRGYPALAHATLGE

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
122 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
146 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
160 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
163 2508501050 Microvirga lupini Lut6 Isolate Nodule
164 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
165 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
166 2773857925 Microvirga vignae BR3299 Isolate Unclassified
167 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
168 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
169 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
170 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
171 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.9
Metatranscriptomes 0.41
Isolates 3.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.64
Rhizoplane 2.46
Rhizosphere 93.03
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10060492 3300005327 Bacteria 3085
2 JGI24738J21930_10013824 3300002075 Bacteria 1738
3 JGI24744J21845_10003691 3300002077 Bacteria 3155
4 Ga0070658_10070058 3300005327 Bacteria 2870
5 Ga0070658_10136703 3300005327 Bacteria 2045
6 Ga0070658_10478341 3300005327 Bacteria 1075
7 Ga0070683_100009750 3300005329 Bacteria 8227
8 Ga0070683_100093572 3300005329 Bacteria 2824
9 Ga0070666_10105607 3300005335 Bacteria 1945
10 Ga0070680_100074275 3300005336 Bacteria 2798
11 Ga0070682_100087504 3300005337 Bacteria 2031
12 Ga0068868_100007674 3300005338 Bacteria 7696
13 Ga0070660_100010273 3300005339 Bacteria 6608
14 Ga0070660_100059386 3300005339 Bacteria 2966
15 Ga0070660_100091192 3300005339 Bacteria 2403
16 Ga0070691_10008590 3300005341 Bacteria 4676
17 Ga0070687_100045657 3300005343 Bacteria 2238
18 Ga0070692_10042997 3300005345 Bacteria 2322
19 Ga0070673_100003875 3300005364 Bacteria 9401
20 Ga0070673_100187033 3300005364 Bacteria 1776
21 Ga0070659_100003698 3300005366 Bacteria 10912
22 Ga0070659_100274443 3300005366 Bacteria 1401
23 Ga0070659_100369689 3300005366 Bacteria 1206
24 Ga0070659_100441682 3300005366 Bacteria 1102
25 Ga0070667_100002264 3300005367 Bacteria 16953
26 Ga0070703_10005174 3300005406 Bacteria 3644
27 Ga0070709_10000005 3300005434 Bacteria 197619
28 Ga0070714_100048635 3300005435 Bacteria 3607
29 Ga0070713_100086960 3300005436 Bacteria 2681
30 Ga0070705_100000010 3300005440 Bacteria 102079
31 Ga0070694_100000843 3300005444 Bacteria 17266
32 Ga0070663_100007136 3300005455 Bacteria 6782
33 Ga0070663_100021534 3300005455 Bacteria 4291
34 Ga0070678_100102475 3300005456 Bacteria 2221
35 Ga0070662_100010914 3300005457 Bacteria 5986
36 Ga0070662_100175224 3300005457 Bacteria 1687
37 Ga0070662_100257456 3300005457 Bacteria 1405
38 Ga0068867_100073611 3300005459 Bacteria 2558
39 Ga0070699_100005402 3300005518 Bacteria 11208
40 Ga0070679_100004449 3300005530 Bacteria 12948
41 Ga0070679_100249973 3300005530 Bacteria 1730
42 Ga0070679_100482215 3300005530 Bacteria 1184
43 Ga0070684_100071220 3300005535 Bacteria 3060
44 Ga0070684_100092813 3300005535 Bacteria 2686
45 Ga0070697_100037171 3300005536 Bacteria 3934
46 Ga0068853_100287231 3300005539 Bacteria 1518
47 Ga0070672_100168280 3300005543 Bacteria 1822
48 Ga0070672_100332907 3300005543 Bacteria 1292
49 Ga0070695_100000717 3300005545 Bacteria 17660
50 Ga0070695_100094912 3300005545 Bacteria 1998
51 Ga0070696_100000088 3300005546 Bacteria 45502
52 Ga0070696_100010296 3300005546 Bacteria 6261
53 Ga0070696_100068956 3300005546 Bacteria 2484
54 Ga0070696_100425502 3300005546 Bacteria 1043
55 Ga0070665_100213949 3300005548 Bacteria 1928
56 Ga0070704_100293188 3300005549 Bacteria 1352
57 Ga0068857_100004640 3300005577 Bacteria 11638
58 Ga0068852_100458937 3300005616 Bacteria 1263
59 Ga0068859_100003205 3300005617 Bacteria 16660
60 Ga0068864_100095111 3300005618 Bacteria 2634
61 Ga0068866_10055238 3300005718 Bacteria 2039
62 Ga0068861_100284710 3300005719 Bacteria 1425
63 Ga0068863_100069643 3300005841 Bacteria 3326
64 Ga0068858_100029985 3300005842 Bacteria 5051
65 Ga0068860_100002735 3300005843 Bacteria 18345
66 Ga0068862_100000484 3300005844 Bacteria 42509
67 Ga0070712_100029285 3300006175 Bacteria 3690
68 Ga0075431_100006414 3300006847 Bacteria 11675
69 Ga0075429_100260046 3300006880 Bacteria 1519
70 Ga0097620_100003205 3300006931 Bacteria 16660
71 Ga0111539_10120953 3300009094 Bacteria 3068
72 Ga0114129_10098103 3300009147 Bacteria 4056
73 Ga0114129_10243013 3300009147 Bacteria 2420
74 Ga0105243_10108087 3300009148 Bacteria 2321
75 Ga0105248_10002473 3300009177 Bacteria 20524
76 Ga0105249_10006811 3300009553 Bacteria 9964
77 Ga0105249_10007010 3300009553 Bacteria 9835
78 Ga0105239_10546360 3300010375 Bacteria 1319
79 Ga0105246_10015949 3300011119 Bacteria 4752
80 Ga0157373_10220021 3300013100 Bacteria 1339
81 Ga0157371_10308533 3300013102 Bacteria 1146
82 Ga0157370_10048791 3300013104 Bacteria 4056
83 Ga0157378_10023882 3300013297 Bacteria 5377
84 Ga0157378_10323152 3300013297 Bacteria 1499
85 Ga0157372_10650966 3300013307 Bacteria 1227
86 Ga0157375_10161533 3300013308 Bacteria 2382
87 Ga0157380_10077248 3300014326 Bacteria 2713
88 Ga0224712_10033836 3300022467 Bacteria 1874
89 Ga0207653_10000532 3300025885 Bacteria 14308
90 Ga0207688_10070468 3300025901 Bacteria 1983
91 Ga0207680_10001585 3300025903 Bacteria 10727
92 Ga0207647_10143309 3300025904 Bacteria 1400
93 Ga0207699_10000015 3300025906 Bacteria 251707
94 Ga0207705_10041957 3300025909 Bacteria 3283
95 Ga0207705_10064759 3300025909 Bacteria 2641
96 Ga0207707_10210161 3300025912 Bacteria 1695
97 Ga0207660_10071921 3300025917 Bacteria 2518
98 Ga0207662_10008923 3300025918 Bacteria 5500
99 Ga0207657_10017349 3300025919 Bacteria 6906
100 Ga0207657_10038638 3300025919 Bacteria 4247
101 Ga0207657_10198384 3300025919 Bacteria 1616
102 Ga0207652_10005673 3300025921 Bacteria 10127
103 Ga0207652_10118852 3300025921 Bacteria 2350
104 Ga0207706_10141708 3300025933 Bacteria 2115
105 Ga0207706_10142578 3300025933 Bacteria 2108
106 Ga0207706_10165085 3300025933 Bacteria 1946
107 Ga0207709_10156378 3300025935 Bacteria 1585
108 Ga0207709_10172496 3300025935 Bacteria 1519
109 Ga0207669_10094645 3300025937 Bacteria 1955
110 Ga0207669_10218067 3300025937 Bacteria 1398
111 Ga0207665_10013949 3300025939 Bacteria 5285
112 Ga0207691_10153913 3300025940 Bacteria 2020
113 Ga0207711_10001137 3300025941 Bacteria 25387
114 Ga0207661_10218677 3300025944 Bacteria 1683
115 Ga0207661_10396648 3300025944 Bacteria 1251
116 Ga0207679_10021954 3300025945 Bacteria 4338
117 Ga0207651_10008194 3300025960 Bacteria 5627
118 Ga0207712_10027951 3300025961 Bacteria 3769
119 Ga0207640_10097625 3300025981 Bacteria 2051
120 Ga0207658_10012368 3300025986 Bacteria 5828
121 Ga0207677_10240368 3300026023 Bacteria 1465
122 Ga0207703_10005554 3300026035 Bacteria 10122
123 Ga0207639_10073581 3300026041 Bacteria 2679
124 Ga0207678_10010182 3300026067 Bacteria 8254
125 Ga0207678_10068906 3300026067 Bacteria 3034
126 Ga0207708_10053172 3300026075 Bacteria 3085
127 Ga0207708_10197442 3300026075 Bacteria 1604
128 Ga0207648_10001962 3300026089 Bacteria 22487
129 Ga0207648_10168861 3300026089 Bacteria 1933
130 Ga0207676_10044258 3300026095 Bacteria 3433
131 Ga0207674_10045788 3300026116 Bacteria 4497
132 Ga0207674_10168165 3300026116 Bacteria 2146
133 Ga0207674_10348639 3300026116 Bacteria 1431
134 Ga0207675_100086225 3300026118 Bacteria 2948
135 Ga0207683_10005368 3300026121 Bacteria 10988
136 Ga0207698_10212508 3300026142 Bacteria 1741
137 Ga0207698_10507265 3300026142 Bacteria 1175
138 Ga0209983_1002728 3300027665 Bacteria 3833
139 Ga0268266_10015457 3300028379 Bacteria 6549
140 Ga0268265_10001309 3300028380 Bacteria 21366
141 Ga0268264_10006157 3300028381 Bacteria 10133
142 Ga0307408_100107705 3300031548 Bacteria 2135
143 Ga0307408_100171524 3300031548 Bacteria 1733
144 Ga0307408_100242692 3300031548 Bacteria 1481
145 Ga0307413_10194687 3300031824 Bacteria 1458
146 Ga0307410_10154360 3300031852 Bacteria 1713
147 Ga0307410_10468964 3300031852 Bacteria 1030
148 Ga0307406_10029707 3300031901 Bacteria 3312
149 Ga0307407_10082286 3300031903 Bacteria 1950
150 Ga0307412_10129562 3300031911 Bacteria 1830
151 Ga0307409_100035936 3300031995 Bacteria 3635
152 Ga0307409_100147024 3300031995 Bacteria 2039
153 Ga0307414_10032966 3300032004 Bacteria 3417
154 Ga0307414_10130566 3300032004 Bacteria 1949
155 Ga0307411_10108853 3300032005 Bacteria 1978
156 Ga0307411_10166807 3300032005 Bacteria 1656
157 Ga0307415_100071778 3300032126 Bacteria 2436
158 Ga0373935_0039152 3300035692 Bacteria 2971
159 Ga0395905_0028946 3300037471 Bacteria 5221
160 Ga0395905_0028951 3300037471 Bacteria 5221
161 Ga0436365_1700943 3300039437 Bacteria 2374
162 Ga0436365_1715116 3300039437 Bacteria 3111
163 Ga0439435_0011131 3300042436 Bacteria 2153
164 Ga0451577_0297680 3300042876 Bacteria 1462
165 Ga0466963_0224476 3300044694 Bacteria 1316
166 Ga0453684_0014865 3300044712 Bacteria 12384
167 Ga0451576_0007991 3300045051 Bacteria 12509
168 Ga0466967_0238924 3300045976 Bacteria 1732
169 Ga0495598_0019159 3300046537 Bacteria 1790
170 Ga0495621_0014061 3300046539 Bacteria 2527
171 Ga0496102_0003977 3300048905 Bacteria 12520
172 Ga0496103_0003159 3300048906 Bacteria 10123
173 Ga0496104_0448439 3300048907 Bacteria 1202
174 Ga0496106_0005470 3300048909 Bacteria 9402
175 Ga0496109_0070939 3300048912 Bacteria 3198
176 Ga0496115_0085973 3300048918 Bacteria 2566
177 Ga0501036_0023228 3300049572 Bacteria 5221
178 Ga0501038_0030266 3300049574 Bacteria 4792
179 Ga0501038_0169905 3300049574 Bacteria 1766
180 Ga0501039_0148115 3300049575 Bacteria 1845
181 Ga0501039_0161003 3300049575 Bacteria 1764
182 Ga0501040_0013707 3300049576 Bacteria 5332
183 Ga0501040_0019620 3300049576 Bacteria 4500
184 Ga0501040_0069639 3300049576 Bacteria 2427
185 Ga0501041_0004961 3300049577 Bacteria 7743
186 Ga0501042_0005144 3300049578 Bacteria 8396
187 Ga0501042_0005233 3300049578 Bacteria 8335
188 Ga0501042_0268228 3300049578 Bacteria 1232
189 Ga0501047_0138281 3300049581 Bacteria 2315
190 Ga0501048_0040486 3300049582 Bacteria 3339
191 Ga0501048_0065832 3300049582 Bacteria 2562
192 Ga0501067_0116105 3300049583 Bacteria 1489
193 Ga0501070_0253510 3300049586 Bacteria 1439
194 Ga0501071_0005369 3300049587 Bacteria 8228
195 Ga0501071_0298312 3300049587 Bacteria 1221
196 Ga0501072_0021086 3300049588 Bacteria 5055
197 Ga0501072_0105264 3300049588 Bacteria 2243
198 Ga0501075_0031183 3300049591 Bacteria 3955
199 Ga0501076_0056946 3300049592 Bacteria 3103
200 Ga0501077_0003427 3300049593 Bacteria 9537
201 Ga0501077_0005404 3300049593 Bacteria 7768
202 Ga0501077_0068734 3300049593 Bacteria 2245
203 Ga0501077_0148808 3300049593 Bacteria 1486
204 Ga0501077_0153192 3300049593 Bacteria 1463
205 Ga0501238_005688 3300049671 Bacteria 1588
206 Ga0501252_001235 3300049682 Bacteria 2306
207 Ga0501079_0038383 3300049741 Bacteria 3693
208 Ga0501079_0052359 3300049741 Bacteria 3150
209 Ga0501079_0060935 3300049741 Bacteria 2911
210 Ga0501079_0226743 3300049741 Bacteria 1460
211 Ga0501080_0027875 3300049742 Bacteria 5252
212 Ga0501080_0043404 3300049742 Bacteria 4187
213 Ga0501081_0020820 3300049743 Bacteria 4375
214 Ga0501081_0161927 3300049743 Bacteria 1612
215 Ga0501081_0412302 3300049743 Bacteria 1001
216 Ga0501083_0040030 3300049744 Bacteria 3182
217 Ga0501035_0137599 3300049822 Bacteria 2125
218 Ga0501035_0147618 3300049822 Bacteria 2042
219 Ga0501044_0211746 3300049823 Bacteria 1892
220 Ga0501045_0003330 3300049824 Bacteria 10991
221 nmdc:mga05p37_159207_c1 3300050507 Bacteria 2758
222 nmdc:mga05p37_179320_c1 3300050507 Bacteria 2578
223 nmdc:mga09592_221592_c1 3300050508 Bacteria 1639
224 nmdc:mga09592_406481_c1 3300050508 Unclassified 1176
225 nmdc:mga06r32_9008_c1 3300050510 Bacteria 8992
226 Ga0501084_0016539 3300054114 Bacteria 6125
227 Ga0501084_0039134 3300054114 Bacteria 3966
228 Ga0590071_000406 3300059421 Bacteria 12658
229 Ga0590075_013808 3300059424 Bacteria 1971
230 Ga0590077_009134 3300059426 Bacteria 2031
231 Ga0501082_0009248 3300060353 Bacteria 8493
232 Ga0501082_0014814 3300060353 Bacteria 6717
233 Ga0501082_0024799 3300060353 Bacteria 5169
234 Ga0501082_0390013 3300060353 Bacteria 1215
235 Ga0530510_0043184 3300061734 Bacteria 3256
236 2508727718 2508501050 Bacteria 9633614
237 2509077613 2508501114 Bacteria 7082538
238 2643949844 2643221588 Bacteria 3692460
239 2774869097 2773857925 Bacteria 6472445
240 2776258447 2775506901 Bacteria 9631051
241 2835319711 2835312727 Bacteria 7413381
242 2848298451 2848297114 Bacteria 3608511
243 2882461313 2882456835 Bacteria 6863978
244 2894242165 2894232714 Bacteria 8834183
245 Ga0070658_10060492
246 JGI24738J21930_10013824
247 JGI24744J21845_10003691
248 Ga0070658_10070058
249 Ga0070658_10136703
250 Ga0070658_10478341
251 Ga0070683_100009750
252 Ga0070683_100093572
253 Ga0070666_10105607
254 Ga0070680_100074275
255 Ga0070682_100087504
256 Ga0068868_100007674
257 Ga0070660_100010273
258 Ga0070660_100059386
259 Ga0070660_100091192
260 Ga0070691_10008590
261 Ga0070687_100045657
262 Ga0070692_10042997
263 Ga0070673_100003875
264 Ga0070673_100187033
265 Ga0070659_100003698
266 Ga0070659_100274443
267 Ga0070659_100369689
268 Ga0070659_100441682
269 Ga0070667_100002264
270 Ga0070703_10005174
271 Ga0070709_10000005
272 Ga0070714_100048635
273 Ga0070713_100086960
274 Ga0070705_100000010
275 Ga0070694_100000843
276 Ga0070663_100007136
277 Ga0070663_100021534
278 Ga0070678_100102475
279 Ga0070662_100010914
280 Ga0070662_100175224
281 Ga0070662_100257456
282 Ga0068867_100073611
283 Ga0070699_100005402
284 Ga0070679_100004449
285 Ga0070679_100249973
286 Ga0070679_100482215
287 Ga0070684_100071220
288 Ga0070684_100092813
289 Ga0070697_100037171
290 Ga0068853_100287231
291 Ga0070672_100168280
292 Ga0070672_100332907
293 Ga0070695_100000717
294 Ga0070695_100094912
295 Ga0070696_100000088
296 Ga0070696_100010296
297 Ga0070696_100068956
298 Ga0070696_100425502
299 Ga0070665_100213949
300 Ga0070704_100293188
301 Ga0068857_100004640
302 Ga0068852_100458937
303 Ga0068859_100003205
304 Ga0068864_100095111
305 Ga0068866_10055238
306 Ga0068861_100284710
307 Ga0068863_100069643
308 Ga0068858_100029985
309 Ga0068860_100002735
310 Ga0068862_100000484
311 Ga0070712_100029285
312 Ga0075431_100006414
313 Ga0075429_100260046
314 Ga0097620_100003205
315 Ga0111539_10120953
316 Ga0114129_10098103
317 Ga0114129_10243013
318 Ga0105243_10108087
319 Ga0105248_10002473
320 Ga0105249_10006811
321 Ga0105249_10007010
322 Ga0105239_10546360
323 Ga0105246_10015949
324 Ga0157373_10220021
325 Ga0157371_10308533
326 Ga0157370_10048791
327 Ga0157378_10023882
328 Ga0157378_10323152
329 Ga0157372_10650966
330 Ga0157375_10161533
331 Ga0157380_10077248
332 Ga0224712_10033836
333 Ga0207653_10000532
334 Ga0207688_10070468
335 Ga0207680_10001585
336 Ga0207647_10143309
337 Ga0207699_10000015
338 Ga0207705_10041957
339 Ga0207705_10064759
340 Ga0207707_10210161
341 Ga0207660_10071921
342 Ga0207662_10008923
343 Ga0207657_10017349
344 Ga0207657_10038638
345 Ga0207657_10198384
346 Ga0207652_10005673
347 Ga0207652_10118852
348 Ga0207706_10141708
349 Ga0207706_10142578
350 Ga0207706_10165085
351 Ga0207709_10156378
352 Ga0207709_10172496
353 Ga0207669_10094645
354 Ga0207669_10218067
355 Ga0207665_10013949
356 Ga0207691_10153913
357 Ga0207711_10001137
358 Ga0207661_10218677
359 Ga0207661_10396648
360 Ga0207679_10021954
361 Ga0207651_10008194
362 Ga0207712_10027951
363 Ga0207640_10097625
364 Ga0207658_10012368
365 Ga0207677_10240368
366 Ga0207703_10005554
367 Ga0207639_10073581
368 Ga0207678_10010182
369 Ga0207678_10068906
370 Ga0207708_10053172
371 Ga0207708_10197442
372 Ga0207648_10001962
373 Ga0207648_10168861
374 Ga0207676_10044258
375 Ga0207674_10045788
376 Ga0207674_10168165
377 Ga0207674_10348639
378 Ga0207675_100086225
379 Ga0207683_10005368
380 Ga0207698_10212508
381 Ga0207698_10507265
382 Ga0209983_1002728
383 Ga0268266_10015457
384 Ga0268265_10001309
385 Ga0268264_10006157
386 Ga0307408_100107705
387 Ga0307408_100171524
388 Ga0307408_100242692
389 Ga0307413_10194687
390 Ga0307410_10154360
391 Ga0307410_10468964
392 Ga0307406_10029707
393 Ga0307407_10082286
394 Ga0307412_10129562
395 Ga0307409_100035936
396 Ga0307409_100147024
397 Ga0307414_10032966
398 Ga0307414_10130566
399 Ga0307411_10108853
400 Ga0307411_10166807
401 Ga0307415_100071778
402 Ga0373935_0039152
403 Ga0395905_0028946
404 Ga0395905_0028951
405 Ga0436365_1700943
406 Ga0436365_1715116
407 Ga0439435_0011131
408 Ga0451577_0297680
409 Ga0466963_0224476
410 Ga0453684_0014865
411 Ga0451576_0007991
412 Ga0466967_0238924
413 Ga0495598_0019159
414 Ga0495621_0014061
415 Ga0496102_0003977
416 Ga0496103_0003159
417 Ga0496104_0448439
418 Ga0496106_0005470
419 Ga0496109_0070939
420 Ga0496115_0085973
421 Ga0501036_0023228
422 Ga0501038_0030266
423 Ga0501038_0169905
424 Ga0501039_0148115
425 Ga0501039_0161003
426 Ga0501040_0013707
427 Ga0501040_0019620
428 Ga0501040_0069639
429 Ga0501041_0004961
430 Ga0501042_0005144
431 Ga0501042_0005233
432 Ga0501042_0268228
433 Ga0501047_0138281
434 Ga0501048_0040486
435 Ga0501048_0065832
436 Ga0501067_0116105
437 Ga0501070_0253510
438 Ga0501071_0005369
439 Ga0501071_0298312
440 Ga0501072_0021086
441 Ga0501072_0105264
442 Ga0501075_0031183
443 Ga0501076_0056946
444 Ga0501077_0003427
445 Ga0501077_0005404
446 Ga0501077_0068734
447 Ga0501077_0148808
448 Ga0501077_0153192
449 Ga0501238_005688
450 Ga0501252_001235
451 Ga0501079_0038383
452 Ga0501079_0052359
453 Ga0501079_0060935
454 Ga0501079_0226743
455 Ga0501080_0027875
456 Ga0501080_0043404
457 Ga0501081_0020820
458 Ga0501081_0161927
459 Ga0501081_0412302
460 Ga0501083_0040030
461 Ga0501035_0137599
462 Ga0501035_0147618
463 Ga0501044_0211746
464 Ga0501045_0003330
465 nmdc:mga05p37_159207_c1
466 nmdc:mga05p37_179320_c1
467 nmdc:mga09592_221592_c1
468 nmdc:mga09592_406481_c1
469 nmdc:mga06r32_9008_c1
470 Ga0501084_0016539
471 Ga0501084_0039134
472 Ga0590071_000406
473 Ga0590075_013808
474 Ga0590077_009134
475 Ga0501082_0009248
476 Ga0501082_0014814
477 Ga0501082_0024799
478 Ga0501082_0390013
479 Ga0530510_0043184
480 2508727718
481 2509077613
482 2643949844
483 2774869097
484 2776258447
485 2835319711
486 2848298451
487 2882461313
488 2894242165

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

12

200

0.94

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

223

325

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.9549 2 300
2fmt-assembly2.cif.gz_B methionyl-trnafmet formyltransferase complexed with formyl-methionyl-trnafmet 0.9516 2 300
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.9487 2 300
2fmt-assembly2.cif.gz_B methionyl-trnafmet formyltransferase complexed with formyl-methionyl-trnafmet 0.9455 2 300
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9342 1 299
ID Description Score Start End Superfamily
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9532 2 202 3.40.50.170
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9489 2 202 3.40.50.170
5uaiB02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.9485 205 298 3.10.25.10
af_B4FRN6_28_246_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9474 2 202 3.40.50.170
3q0iA02 Alpha Beta;Roll;Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2;Formyl transferase, C-terminal domain 0.9472 204 298 3.10.25.10
ID Description Score Start End GO Terms
AF-A0A258BH43-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.984 1 127 GO:0004479
GO:0005829
AF-A0A2V7K666-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9815 1 124 GO:0004479
GO:0005829
AF-A0A1H9TCB6-F1-model_v4 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9809 1 299 GO:0004479
GO:0005829
AF-A0A3A8LUR5-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9788 26 188 GO:0004479
GO:0005829
AF-D8FIG2-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9785 1 202 GO:0004479
GO:0005829

Map