F356073

General Info

Members Datasets Scaffolds Average Seq Length
243 190 486 260

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842775625|2842779967
Length 296
Sequence GKPPTGHAGRPPVNNDGRAPAGTAAQAGAAGAATPVGADAPDVTTRTVRDPVVEARGVAMAFGSNTLFRDVSFQVAKGEVFVILGGSGCGKSTLLKLMIGLYEPTAGETTILGEDLHAADGDARKQLLARLGVMWQSGALFGSMTLLENVMLPLEEHTRLPRAAREEVARVKLGLVGLSDAANRLPAEISGGMAKRAGIARAMALDPPVLFLDEPSAGLDPITSAGLDQLIKDLARDLGTTFVVVTHELQSILAIGDRCIMLDKQAKGMIAEGDPRELRDHATHPTVRAFFRREAM

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
102 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
103 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
104 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
109 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
112 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
113 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
114 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
117 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
121 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
134 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
135 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
136 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
137 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
138 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
139 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
140 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
147 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
148 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
149 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
150 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
151 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
152 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
153 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
161 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
165 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
185 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
186 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
187 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
188 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
189 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
190 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.94
Metatranscriptomes 0
Isolates 2.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.82
Nodule 0
Rhizoplane 0.41
Rhizosphere 93.42
Stem 0
Stem Tuber 0
Unclassified 3.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10006069 3300003203 Bacteria 5584
2 rootH2_10002770 3300003320 Bacteria 21306
3 Ga0070658_10101787 3300005327 Bacteria 2375
4 Ga0070670_100101268 3300005331 Bacteria 2480
5 Ga0070680_100061839 3300005336 Bacteria 3066
6 Ga0070689_100052915 3300005340 Bacteria 3141
7 Ga0070691_10161370 3300005341 Bacteria 1156
8 Ga0070661_100001210 3300005344 Bacteria 18180
9 Ga0070692_10142861 3300005345 Bacteria 1356
10 Ga0070668_100132667 3300005347 Bacteria 2000
11 Ga0070675_100031983 3300005354 Bacteria 4255
12 Ga0070675_100762478 3300005354 Bacteria 883
13 Ga0070671_100308238 3300005355 Bacteria 1348
14 Ga0070659_100007646 3300005366 Bacteria 7858
15 Ga0070659_100075477 3300005366 Bacteria 2687
16 Ga0070709_10005055 3300005434 Bacteria 7131
17 Ga0070713_100013683 3300005436 Bacteria 5997
18 Ga0070713_100079390 3300005436 Bacteria 2795
19 Ga0070713_100086534 3300005436 Bacteria 2687
20 Ga0070710_10108692 3300005437 Bacteria 1663
21 Ga0070711_100000704 3300005439 Bacteria 17532
22 Ga0070705_100026452 3300005440 Bacteria 3158
23 Ga0070700_100036428 3300005441 Bacteria 2984
24 Ga0070694_100536903 3300005444 Bacteria 935
25 Ga0070678_100005009 3300005456 Bacteria 7593
26 Ga0070681_10056737 3300005458 Bacteria 3897
27 Ga0070706_100324635 3300005467 Bacteria 1435
28 Ga0070707_100037301 3300005468 Bacteria 4638
29 Ga0070698_100240582 3300005471 Bacteria 1743
30 Ga0070699_100214449 3300005518 Bacteria 1714
31 Ga0070679_100052646 3300005530 Bacteria 4053
32 Ga0070679_100070714 3300005530 Bacteria 3481
33 Ga0070672_100312512 3300005543 Unclassified 1334
34 Ga0070696_100357317 3300005546 Bacteria 1133
35 Ga0070665_100018049 3300005548 Bacteria 7081
36 Ga0070665_100035628 3300005548 Bacteria 5004
37 Ga0070704_100147562 3300005549 Bacteria 1845
38 Ga0068856_100045735 3300005614 Bacteria 4311
39 Ga0068859_100419873 3300005617 Bacteria 1434
40 Ga0068859_100466903 3300005617 Bacteria 1358
41 Ga0068864_100184738 3300005618 Bacteria 1908
42 Ga0068861_100085470 3300005719 Bacteria 2478
43 Ga0068863_100275420 3300005841 Bacteria 1629
44 Ga0068858_100093158 3300005842 Bacteria 2805
45 Ga0068860_100081829 3300005843 Bacteria 3070
46 Ga0068862_100057695 3300005844 Bacteria 3330
47 Ga0068862_100493288 3300005844 Bacteria 1161
48 Ga0081455_10269584 3300005937 Bacteria 1236
49 Ga0081539_10000059 3300005985 Bacteria 254888
50 Ga0070717_10269994 3300006028 Bacteria 1507
51 Ga0070712_100035821 3300006175 Bacteria 3371
52 Ga0097621_100262146 3300006237 Bacteria 1516
53 Ga0075430_100255835 3300006846 Bacteria 1451
54 Ga0075433_10000889 3300006852 Bacteria 21051
55 Ga0075434_100002561 3300006871 Bacteria 16047
56 Ga0075436_100046907 3300006914 Bacteria 2980
57 Ga0075436_100287826 3300006914 Unclassified 1176
58 Ga0097620_100419852 3300006931 Bacteria 1434
59 Ga0097620_100466904 3300006931 Bacteria 1358
60 Ga0075435_100000494 3300007076 Bacteria 23988
61 Ga0105240_10139117 3300009093 Unclassified 2905
62 Ga0114129_10000551 3300009147 Bacteria 45956
63 Ga0105249_10375829 3300009553 Bacteria 1446
64 Ga0105246_10083558 3300011119 Unclassified 2282
65 Ga0157369_10193478 3300013105 Bacteria 2136
66 Ga0157374_10065713 3300013296 Bacteria 3407
67 Ga0157374_10357359 3300013296 Bacteria 1452
68 Ga0157378_10017141 3300013297 Bacteria 6349
69 Ga0157375_10024667 3300013308 Bacteria 5571
70 Ga0157375_10219090 3300013308 Bacteria 2061
71 Ga0163163_10057370 3300014325 Bacteria 3850
72 Ga0163163_10257860 3300014325 Bacteria 1794
73 Ga0157380_10132628 3300014326 Bacteria 2128
74 Ga0182008_10025274 3300014497 Bacteria 3016
75 Ga0157379_10198160 3300014968 Bacteria 1815
76 Ga0157376_10435072 3300014969 Bacteria 1276
77 Ga0157376_10529563 3300014969 Bacteria 1163
78 Ga0157376_10549670 3300014969 Bacteria 1143
79 Ga0213875_10049663 3300021388 Bacteria 1966
80 Ga0213875_10076531 3300021388 Bacteria 1562
81 Ga0209026_1000881 3300025250 Bacteria 15631
82 Ga0207697_10003276 3300025315 Bacteria 8046
83 Ga0207682_10016724 3300025893 Bacteria 2862
84 Ga0207699_10023258 3300025906 Bacteria 3370
85 Ga0207645_10015752 3300025907 Bacteria 5014
86 Ga0207643_10034920 3300025908 Bacteria 2818
87 Ga0207707_10072762 3300025912 Bacteria 2996
88 Ga0207695_10018270 3300025913 Bacteria 8114
89 Ga0207693_10005602 3300025915 Bacteria 10440
90 Ga0207693_10173012 3300025915 Bacteria 1700
91 Ga0207660_10061321 3300025917 Bacteria 2706
92 Ga0207657_10170040 3300025919 Bacteria 1766
93 Ga0207649_10000837 3300025920 Bacteria 19831
94 Ga0207652_10078772 3300025921 Bacteria 2878
95 Ga0207646_10110847 3300025922 Bacteria 2462
96 Ga0207694_10172473 3300025924 Bacteria 1752
97 Ga0207659_10649088 3300025926 Bacteria 902
98 Ga0207700_10014642 3300025928 Bacteria 5146
99 Ga0207700_10152981 3300025928 Bacteria 1908
100 Ga0207644_10420375 3300025931 Bacteria 1095
101 Ga0207690_10026743 3300025932 Bacteria 3637
102 Ga0207706_10276342 3300025933 Bacteria 1465
103 Ga0207691_10002750 3300025940 Bacteria 17154
104 Ga0207691_10308167 3300025940 Unclassified 1359
105 Ga0207711_10174968 3300025941 Bacteria 1949
106 Ga0207689_10008920 3300025942 Bacteria 8698
107 Ga0207712_10418322 3300025961 Bacteria 1130
108 Ga0207658_10101801 3300025986 Bacteria 2252
109 Ga0207703_10050391 3300026035 Bacteria 3370
110 Ga0207678_10123201 3300026067 Bacteria 2212
111 Ga0207708_10133392 3300026075 Bacteria 1943
112 Ga0207702_10142589 3300026078 Bacteria 2170
113 Ga0207641_10011710 3300026088 Bacteria 7203
114 Ga0207648_10007305 3300026089 Bacteria 10888
115 Ga0207676_10029347 3300026095 Bacteria 4117
116 Ga0207675_100083638 3300026118 Bacteria 2993
117 Ga0207683_10014378 3300026121 Bacteria 6741
118 Ga0207683_10160189 3300026121 Bacteria 2034
119 Ga0268266_10059630 3300028379 Bacteria 3288
120 Ga0268265_10313840 3300028380 Bacteria 1417
121 Ga0265319_1000912 3300028563 Bacteria 18592
122 Ga0265338_10150143 3300028800 Bacteria 1811
123 Ga0265328_10024835 3300031239 Bacteria 2261
124 Ga0265320_10001707 3300031240 Bacteria 15601
125 Ga0265339_10002382 3300031249 Bacteria 13487
126 Ga0265331_10021956 3300031250 Bacteria 3260
127 Ga0265316_10039362 3300031344 Bacteria 3797
128 Ga0316579_10087939 3300031691 Unclassified 1483
129 Ga0265314_10153327 3300031711 Bacteria 1410
130 Ga0307413_10186243 3300031824 Bacteria 1486
131 Ga0373944_0119239 3300035089 Bacteria 908
132 Ga0373953_0111377 3300035117 Bacteria 1157
133 Ga0373954_0070662 3300035118 Bacteria 1659
134 Ga0373956_0112647 3300035119 Bacteria 1267
135 Ga0373955_0209762 3300035172 Bacteria 1161
136 Ga0316574_0088510 3300035398 Bacteria 1972
137 Ga0373924_0101158 3300035410 Bacteria 1240
138 Ga0373935_0062015 3300035692 Bacteria 2394
139 Ga0373935_0320320 3300035692 Bacteria 1100
140 Ga0373927_0011368 3300035695 Bacteria 5927
141 Ga0373933_0265507 3300035724 Bacteria 1107
142 Ga0373947_0015296 3300035725 Bacteria 4404
143 Ga0373947_0069839 3300035725 Bacteria 2151
144 Ga0373947_0253144 3300035725 Bacteria 1165
145 Ga0373937_0002474 3300036401 Bacteria 15364
146 Ga0373937_0005991 3300036401 Bacteria 10460
147 Ga0373937_0014568 3300036401 Bacteria 6944
148 Ga0373937_0052840 3300036401 Bacteria 3727
149 Ga0373925_0149860 3300037068 Bacteria 1831
150 Ga0373925_0336088 3300037068 Bacteria 1224
151 Ga0436364_0831346 3300037853 Bacteria 1216
152 Ga0436364_1120933 3300037853 Bacteria 4357
153 Ga0436364_1174203 3300037853 Bacteria 2414
154 Ga0436364_1475528 3300037853 Bacteria 1773
155 Ga0395901_0180643 3300038443 Bacteria 2213
156 Ga0436360_0472201 3300039438 Bacteria 3540
157 Ga0436360_0522214 3300039438 Bacteria 3146
158 Ga0436360_0584640 3300039438 Bacteria 2491
159 Ga0450906_030023 3300042145 Bacteria 962
160 Ga0451577_0016954 3300042876 Bacteria 6738
161 Ga0466965_0325171 3300044683 Bacteria 838
162 Ga0453684_0061045 3300044712 Bacteria 4843
163 Ga0466960_0065406 3300044901 Bacteria 1796
164 Ga0451576_0006685 3300045051 Bacteria 14072
165 Ga0451576_0260494 3300045051 Unclassified 1813
166 Ga0451576_0700081 3300045051 Bacteria 1065
167 Ga0495592_0066261 3300046454 Bacteria 2643
168 Ga0495629_0024221 3300046459 Bacteria 4322
169 Ga0495629_0331949 3300046459 Bacteria 1039
170 Ga0495651_0006735 3300046462 Bacteria 8786
171 Ga0495651_0020382 3300046462 Bacteria 5147
172 Ga0495653_0368267 3300046463 Bacteria 920
173 Ga0495639_0035593 3300046475 Bacteria 2228
174 Ga0495662_0084575 3300046476 Bacteria 1544
175 Ga0495664_0000952 3300046477 Bacteria 14838
176 Ga0495618_0236132 3300046514 Bacteria 1150
177 Ga0495628_0062374 3300046516 Bacteria 2922
178 Ga0495628_0076803 3300046516 Bacteria 2599
179 Ga0495630_0000191 3300046517 Bacteria 47951
180 Ga0495630_0195816 3300046517 Bacteria 1542
181 Ga0495666_0013641 3300046526 Bacteria 4052
182 Ga0495652_0365847 3300046529 Bacteria 1029
183 Ga0495640_0022888 3300046533 Bacteria 4564
184 Ga0495586_0000113 3300046535 Bacteria 48115
185 Ga0495587_0039934 3300046536 Bacteria 2807
186 Ga0495587_0073306 3300046536 Unclassified 1989
187 Ga0495587_0084990 3300046536 Bacteria 1832
188 Ga0495645_0003583 3300046543 Bacteria 10523
189 Ga0495645_0010021 3300046543 Bacteria 6638
190 Ga0495645_0101876 3300046543 Bacteria 2041
191 Ga0495667_0010847 3300046559 Bacteria 6160
192 Ga0495667_0047523 3300046559 Bacteria 2835
193 Ga0495634_0004184 3300046642 Bacteria 11396
194 Ga0495625_0433713 3300046660 Bacteria 815
195 Ga0495657_0196432 3300046675 Bacteria 1231
196 Ga0495599_0052486 3300046678 Bacteria 2554
197 Ga0495623_0155617 3300046679 Bacteria 1348
198 Ga0495623_0207961 3300046679 Bacteria 1122
199 Ga0495646_0186931 3300046680 Bacteria 1134
200 Ga0495613_0014830 3300046689 Bacteria 5784
201 Ga0495613_0272466 3300046689 Bacteria 1177
202 Ga0495624_0104296 3300046690 Bacteria 1745
203 Ga0495604_0007330 3300047317 Bacteria 8735
204 Ga0495674_0000804 3300047319 Bacteria 29853
205 Ga0495674_0090947 3300047319 Bacteria 2607
206 Ga0495674_0380455 3300047319 Bacteria 1142
207 Ga0495676_0004987 3300047321 Bacteria 12175
208 Ga0495680_0023559 3300047322 Bacteria 5117
209 Ga0495675_0012376 3300047444 Bacteria 5369
210 Ga0495684_0047813 3300047471 Bacteria 3271
211 Ga0495684_0075923 3300047471 Bacteria 2553
212 Ga0495684_0481625 3300047471 Bacteria 857
213 Ga0495686_0026390 3300047472 Bacteria 3801
214 Ga0495602_0000299 3300048088 Bacteria 45610
215 Ga0496108_0289876 3300048911 Bacteria 1425
216 Ga0496119_0037000 3300048922 Bacteria 3177
217 Ga0496120_0043016 3300048923 Bacteria 2635
218 Ga0501032_0000222 3300049569 Bacteria 47180
219 Ga0501033_0000001 3300049570 Bacteria 795921
220 Ga0501038_0000078 3300049574 Bacteria 81695
221 Ga0501038_0194095 3300049574 Bacteria 1633
222 Ga0501047_0210902 3300049581 Bacteria 1801
223 Ga0501072_0159891 3300049588 Bacteria 1797
224 Ga0501044_0185340 3300049823 Bacteria 2047
225 nmdc:mga05p37_8639_c1 3300050507 Bacteria 12042
226 nmdc:mga0qj67_195084_c1 3300050509 Bacteria 1645
227 nmdc:mga0n895_4884_c1 3300050512 Bacteria 11108
228 nmdc:mga0rr50_3067_c1 3300050513 Bacteria 9565
229 nmdc:mga08x19_40074_c1 3300050514 Bacteria 2980
230 nmdc:mga0a205_10884_c1 3300050515 Bacteria 8370
231 Ga0495601_0001433 3300053077 Bacteria 13137
232 Ga0495601_0121447 3300053077 Bacteria 1697
233 Ga0495612_0002348 3300053078 Bacteria 7794
234 Ga0495612_0120554 3300053078 Bacteria 1128
235 Ga0495619_0010370 3300053085 Bacteria 5865
236 Ga0495619_0054394 3300053085 Bacteria 2649
237 Ga0500641_0025821 3300053096 Bacteria 2276
238 Ga0500658_0120198 3300053134 Bacteria 1164
239 2842779967 2842775625 Bacteria 5587290
240 2883579238 2883577096 Bacteria 4709178
241 2894776136 2894772417 Bacteria 5305674
242 2929204774 2929199973 Bacteria 7260745
243 8055914356 8055909800 Bacteria 7278581
244 JGI25406J46586_10006069
245 rootH2_10002770
246 Ga0070658_10101787
247 Ga0070670_100101268
248 Ga0070680_100061839
249 Ga0070689_100052915
250 Ga0070691_10161370
251 Ga0070661_100001210
252 Ga0070692_10142861
253 Ga0070668_100132667
254 Ga0070675_100031983
255 Ga0070675_100762478
256 Ga0070671_100308238
257 Ga0070659_100007646
258 Ga0070659_100075477
259 Ga0070709_10005055
260 Ga0070713_100013683
261 Ga0070713_100079390
262 Ga0070713_100086534
263 Ga0070710_10108692
264 Ga0070711_100000704
265 Ga0070705_100026452
266 Ga0070700_100036428
267 Ga0070694_100536903
268 Ga0070678_100005009
269 Ga0070681_10056737
270 Ga0070706_100324635
271 Ga0070707_100037301
272 Ga0070698_100240582
273 Ga0070699_100214449
274 Ga0070679_100052646
275 Ga0070679_100070714
276 Ga0070672_100312512
277 Ga0070696_100357317
278 Ga0070665_100018049
279 Ga0070665_100035628
280 Ga0070704_100147562
281 Ga0068856_100045735
282 Ga0068859_100419873
283 Ga0068859_100466903
284 Ga0068864_100184738
285 Ga0068861_100085470
286 Ga0068863_100275420
287 Ga0068858_100093158
288 Ga0068860_100081829
289 Ga0068862_100057695
290 Ga0068862_100493288
291 Ga0081455_10269584
292 Ga0081539_10000059
293 Ga0070717_10269994
294 Ga0070712_100035821
295 Ga0097621_100262146
296 Ga0075430_100255835
297 Ga0075433_10000889
298 Ga0075434_100002561
299 Ga0075436_100046907
300 Ga0075436_100287826
301 Ga0097620_100419852
302 Ga0097620_100466904
303 Ga0075435_100000494
304 Ga0105240_10139117
305 Ga0114129_10000551
306 Ga0105249_10375829
307 Ga0105246_10083558
308 Ga0157369_10193478
309 Ga0157374_10065713
310 Ga0157374_10357359
311 Ga0157378_10017141
312 Ga0157375_10024667
313 Ga0157375_10219090
314 Ga0163163_10057370
315 Ga0163163_10257860
316 Ga0157380_10132628
317 Ga0182008_10025274
318 Ga0157379_10198160
319 Ga0157376_10435072
320 Ga0157376_10529563
321 Ga0157376_10549670
322 Ga0213875_10049663
323 Ga0213875_10076531
324 Ga0209026_1000881
325 Ga0207697_10003276
326 Ga0207682_10016724
327 Ga0207699_10023258
328 Ga0207645_10015752
329 Ga0207643_10034920
330 Ga0207707_10072762
331 Ga0207695_10018270
332 Ga0207693_10005602
333 Ga0207693_10173012
334 Ga0207660_10061321
335 Ga0207657_10170040
336 Ga0207649_10000837
337 Ga0207652_10078772
338 Ga0207646_10110847
339 Ga0207694_10172473
340 Ga0207659_10649088
341 Ga0207700_10014642
342 Ga0207700_10152981
343 Ga0207644_10420375
344 Ga0207690_10026743
345 Ga0207706_10276342
346 Ga0207691_10002750
347 Ga0207691_10308167
348 Ga0207711_10174968
349 Ga0207689_10008920
350 Ga0207712_10418322
351 Ga0207658_10101801
352 Ga0207703_10050391
353 Ga0207678_10123201
354 Ga0207708_10133392
355 Ga0207702_10142589
356 Ga0207641_10011710
357 Ga0207648_10007305
358 Ga0207676_10029347
359 Ga0207675_100083638
360 Ga0207683_10014378
361 Ga0207683_10160189
362 Ga0268266_10059630
363 Ga0268265_10313840
364 Ga0265319_1000912
365 Ga0265338_10150143
366 Ga0265328_10024835
367 Ga0265320_10001707
368 Ga0265339_10002382
369 Ga0265331_10021956
370 Ga0265316_10039362
371 Ga0316579_10087939
372 Ga0265314_10153327
373 Ga0307413_10186243
374 Ga0373944_0119239
375 Ga0373953_0111377
376 Ga0373954_0070662
377 Ga0373956_0112647
378 Ga0373955_0209762
379 Ga0316574_0088510
380 Ga0373924_0101158
381 Ga0373935_0062015
382 Ga0373935_0320320
383 Ga0373927_0011368
384 Ga0373933_0265507
385 Ga0373947_0015296
386 Ga0373947_0069839
387 Ga0373947_0253144
388 Ga0373937_0002474
389 Ga0373937_0005991
390 Ga0373937_0014568
391 Ga0373937_0052840
392 Ga0373925_0149860
393 Ga0373925_0336088
394 Ga0436364_0831346
395 Ga0436364_1120933
396 Ga0436364_1174203
397 Ga0436364_1475528
398 Ga0395901_0180643
399 Ga0436360_0472201
400 Ga0436360_0522214
401 Ga0436360_0584640
402 Ga0450906_030023
403 Ga0451577_0016954
404 Ga0466965_0325171
405 Ga0453684_0061045
406 Ga0466960_0065406
407 Ga0451576_0006685
408 Ga0451576_0260494
409 Ga0451576_0700081
410 Ga0495592_0066261
411 Ga0495629_0024221
412 Ga0495629_0331949
413 Ga0495651_0006735
414 Ga0495651_0020382
415 Ga0495653_0368267
416 Ga0495639_0035593
417 Ga0495662_0084575
418 Ga0495664_0000952
419 Ga0495618_0236132
420 Ga0495628_0062374
421 Ga0495628_0076803
422 Ga0495630_0000191
423 Ga0495630_0195816
424 Ga0495666_0013641
425 Ga0495652_0365847
426 Ga0495640_0022888
427 Ga0495586_0000113
428 Ga0495587_0039934
429 Ga0495587_0073306
430 Ga0495587_0084990
431 Ga0495645_0003583
432 Ga0495645_0010021
433 Ga0495645_0101876
434 Ga0495667_0010847
435 Ga0495667_0047523
436 Ga0495634_0004184
437 Ga0495625_0433713
438 Ga0495657_0196432
439 Ga0495599_0052486
440 Ga0495623_0155617
441 Ga0495623_0207961
442 Ga0495646_0186931
443 Ga0495613_0014830
444 Ga0495613_0272466
445 Ga0495624_0104296
446 Ga0495604_0007330
447 Ga0495674_0000804
448 Ga0495674_0090947
449 Ga0495674_0380455
450 Ga0495676_0004987
451 Ga0495680_0023559
452 Ga0495675_0012376
453 Ga0495684_0047813
454 Ga0495684_0075923
455 Ga0495684_0481625
456 Ga0495686_0026390
457 Ga0495602_0000299
458 Ga0496108_0289876
459 Ga0496119_0037000
460 Ga0496120_0043016
461 Ga0501032_0000222
462 Ga0501033_0000001
463 Ga0501038_0000078
464 Ga0501038_0194095
465 Ga0501047_0210902
466 Ga0501072_0159891
467 Ga0501044_0185340
468 nmdc:mga05p37_8639_c1
469 nmdc:mga0qj67_195084_c1
470 nmdc:mga0n895_4884_c1
471 nmdc:mga0rr50_3067_c1
472 nmdc:mga08x19_40074_c1
473 nmdc:mga0a205_10884_c1
474 Ga0495601_0001433
475 Ga0495601_0121447
476 Ga0495612_0002348
477 Ga0495612_0120554
478 Ga0495619_0010370
479 Ga0495619_0054394
480 Ga0500641_0025821
481 Ga0500658_0120198
482 2842779967
483 2883579238
484 2894776136
485 2929204774
486 8055914356

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

68

217

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9677 16 257
7ch8-assembly1.cif.gz_I cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9659 16 257
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9609 16 257
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9577 19 262
7d06-assembly1.cif.gz_B cryo em structure of the nucleotide free acinetobacter mlafedb complex 0.9465 16 262
ID Description Score Start End Superfamily
af_P9WQL5_26_341_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9756 19 257 3.40.50.300
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.974 16 262 3.40.50.300
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9586 16 262 3.40.50.300
af_P77795_1_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9553 17 238 3.40.50.300
af_P14175_33_289_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9535 43 258 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3C0PHH4-F1-model_v4 ABC transporter ATP-binding protein 0.9813 13 259 GO:0005524
GO:0016887
AF-A0A3A4NAN0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9739 65 262 GO:0005524
GO:0016887
AF-A0A3C0VK17-F1-model_v4 ABC transporter ATP-binding protein 0.9707 16 260 GO:0005524
GO:0016887
AF-A0A7C5Q0K9-F1-model_v4 ATP-binding cassette domain-containing protein 0.9704 11 262 GO:0005524
GO:0016887
AF-A0A847F754-F1-model_v4 ATP-binding cassette domain-containing protein 0.9694 133 262 GO:0005524
GO:0016887

Map