F355696

General Info

Members Datasets Scaffolds Average Seq Length
243 191 237 408

Family's Representative Sequence

Representative Sequence 3300027378|Ga0209981_1000043|Ga0209981_100004317
Length 455
Sequence MDFDWRHPLRIGPLMLRLPWPRAMFGLGGLMTEAPSPRGPRADRKAAFGFIFASSVMNAISFGIMIPVLPNLLKQMTGGDFAQASDWNVVFASTWGVMQFFSGPFLGLLSDRVGRRPILLVSLGGLAIDFLFMALAPTLGWLYLGRIINGLTAATFSTAGAYVADITPPEGRAKAFGMMGAAFGFGFLIGPVLGGLVAHYYSLRTPFFVAAALTGANWLYGLLVLPESLPPERRVTAFTLKKANPIGSLIFLRRHAQLLLLAGINFLFLFAQNVLPTVFVLYAGYRYHWSILIMSLTLTGTGALSIFTQMVAVGPVVARIGERGALLVGLVSGILGFALYAYAPVGWVYVASAPVFALINFVPAGVQGLMSRRVGPSEQGQLQGANQSLQGIASILGPVVFGTTFSLAVRHDARWHTPGLPIYIASATLMVALLLAQRVLPAPAAIIAPEDAGTI

Samples

Sample ID Description Type Environment
1 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
2 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
3 2849560528 Caulobacter zeae 410 Isolate Unclassified
4 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
5 2851153111 Caulobacter radicis 736 Isolate Unclassified
6 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
101 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
102 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
103 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
104 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
105 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
111 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
112 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
118 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
119 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
120 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
121 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
138 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
179 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
180 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
181 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
182 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
183 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
184 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
185 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
186 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
187 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
188 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
189 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.53
Metatranscriptomes 0
Isolates 2.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.64
Nodule 0
Rhizoplane 2.88
Rhizosphere 83.13
Stem 0
Stem Tuber 0
Unclassified 5.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055528_1014132 3300003790 Bacteria 2974
2 Ga0070666_10000276 3300005335 Bacteria 33925
3 Ga0070666_10035582 3300005335 Bacteria 3303
4 Ga0070680_100027254 3300005336 Bacteria 4575
5 Ga0070660_100003643 3300005339 Bacteria 10638
6 Ga0070691_10000339 3300005341 Bacteria 16574
7 Ga0070675_100014949 3300005354 Bacteria 6129
8 Ga0070671_100112357 3300005355 Bacteria 2288
9 Ga0070674_100006141 3300005356 Bacteria 6984
10 Ga0070673_100013052 3300005364 Bacteria 5731
11 Ga0070688_100129120 3300005365 Bacteria 1703
12 Ga0070659_100002974 3300005366 Bacteria 12077
13 Ga0070667_100147517 3300005367 Bacteria 2064
14 Ga0070709_10000408 3300005434 Bacteria 26266
15 Ga0070709_10014232 3300005434 Bacteria 4497
16 Ga0070714_100006162 3300005435 Bacteria 9221
17 Ga0070713_100000333 3300005436 Bacteria 30842
18 Ga0070701_10105232 3300005438 Bacteria 1569
19 Ga0070711_100109413 3300005439 Bacteria 2026
20 Ga0070678_100003632 3300005456 Bacteria 8606
21 Ga0070681_10006326 3300005458 Bacteria 11516
22 Ga0070707_100000005 3300005468 Bacteria 205406
23 Ga0070699_100018141 3300005518 Bacteria 6046
24 Ga0070697_100009273 3300005536 Bacteria 7691
25 Ga0068853_100162647 3300005539 Bacteria 2015
26 Ga0068853_100282516 3300005539 Bacteria 1530
27 Ga0070672_100000110 3300005543 Bacteria 41275
28 Ga0070672_100002326 3300005543 Bacteria 12016
29 Ga0070695_100063839 3300005545 Bacteria 2395
30 Ga0070693_100001504 3300005547 Bacteria 10502
31 Ga0070693_100144551 3300005547 Bacteria 1501
32 Ga0070665_100185531 3300005548 Bacteria 2081
33 Ga0068855_100010386 3300005563 Bacteria 11231
34 Ga0068857_100001587 3300005577 Bacteria 18219
35 Ga0068854_100000055 3300005578 Bacteria 83740
36 Ga0068854_100028475 3300005578 Bacteria 3861
37 Ga0068856_100000601 3300005614 Bacteria 39402
38 Ga0068856_100001518 3300005614 Bacteria 24335
39 Ga0068856_100192015 3300005614 Bacteria 2056
40 Ga0068858_100120396 3300005842 Bacteria 2454
41 Ga0081540_1046705 3300005983 Bacteria 2183
42 Ga0070716_100033698 3300006173 Bacteria 2803
43 Ga0070712_100000023 3300006175 Bacteria 80972
44 Ga0070712_100000803 3300006175 Bacteria 18648
45 Ga0097621_100034950 3300006237 Bacteria 4012
46 Ga0068871_100073840 3300006358 Bacteria 2813
47 Ga0068871_100242999 3300006358 Bacteria 1566
48 Ga0068865_100220066 3300006881 Bacteria 1484
49 Ga0075436_100000211 3300006914 Bacteria 36106
50 Ga0075436_100006135 3300006914 Bacteria 8254
51 Ga0075435_100002305 3300007076 Bacteria 12619
52 Ga0099794_10049147 3300007265 Unclassified 2026
53 Ga0099795_10010184 3300007788 Bacteria 2757
54 Ga0105240_10003148 3300009093 Bacteria 25967
55 Ga0105240_10014862 3300009093 Bacteria 10610
56 Ga0105240_10022786 3300009093 Bacteria 8297
57 Ga0105240_10065152 3300009093 Bacteria 4524
58 Ga0111539_10007547 3300009094 Bacteria 13905
59 Ga0111539_10032622 3300009094 Bacteria 6323
60 Ga0105243_10323082 3300009148 Bacteria 1407
61 Ga0105241_10014169 3300009174 Bacteria 5842
62 Ga0105242_10253376 3300009176 Bacteria 1587
63 Ga0105248_10004097 3300009177 Bacteria 16120
64 Ga0105237_10030554 3300009545 Bacteria 5470
65 Ga0105238_10006744 3300009551 Bacteria 11467
66 Ga0099796_10003221 3300010159 Bacteria 3745
67 Ga0157373_10001642 3300013100 Bacteria 17076
68 Ga0157371_10063655 3300013102 Bacteria 2614
69 Ga0157370_10009389 3300013104 Bacteria 10461
70 Ga0157370_10012463 3300013104 Bacteria 8814
71 Ga0157369_10014455 3300013105 Bacteria 8911
72 Ga0157378_10013492 3300013297 Bacteria 7146
73 Ga0157372_10121683 3300013307 Bacteria 2998
74 Ga0157375_10001127 3300013308 Bacteria 23141
75 Ga0157379_10008855 3300014968 Bacteria 8774
76 Ga0157379_10008978 3300014968 Bacteria 8713
77 Ga0157379_10009508 3300014968 Bacteria 8466
78 Ga0157379_10138799 3300014968 Bacteria 2191
79 Ga0157379_10346072 3300014968 Unclassified 1360
80 Ga0157376_10069892 3300014969 Unclassified 2979
81 Ga0213876_10026768 3300021384 Bacteria 3042
82 Ga0209026_1000653 3300025250 Bacteria 21263
83 Ga0209256_1017414 3300025299 Bacteria 2386
84 Ga0207680_10001634 3300025903 Bacteria 10595
85 Ga0207680_10009383 3300025903 Bacteria 4853
86 Ga0207699_10000280 3300025906 Bacteria 27852
87 Ga0207645_10010327 3300025907 Bacteria 6409
88 Ga0207707_10009488 3300025912 Bacteria 8440
89 Ga0207695_10002640 3300025913 Bacteria 26217
90 Ga0207695_10018366 3300025913 Bacteria 8090
91 Ga0207695_10107929 3300025913 Bacteria 2769
92 Ga0207695_10154700 3300025913 Bacteria 2229
93 Ga0207671_10127785 3300025914 Bacteria 1949
94 Ga0207693_10000018 3300025915 Bacteria 138365
95 Ga0207693_10000534 3300025915 Bacteria 34415
96 Ga0207663_10019060 3300025916 Bacteria 3857
97 Ga0207657_10008295 3300025919 Bacteria 10569
98 Ga0207646_10000022 3300025922 Bacteria 259328
99 Ga0207659_10051703 3300025926 Bacteria 2924
100 Ga0207700_10000026 3300025928 Bacteria 139690
101 Ga0207664_10055790 3300025929 Bacteria 3136
102 Ga0207644_10188534 3300025931 Bacteria 1620
103 Ga0207690_10004051 3300025932 Bacteria 8655
104 Ga0207706_10020078 3300025933 Bacteria 6003
105 Ga0207669_10016874 3300025937 Bacteria 3728
106 Ga0207691_10000261 3300025940 Bacteria 52356
107 Ga0207711_10003490 3300025941 Bacteria 13607
108 Ga0207667_10106293 3300025949 Bacteria 2895
109 Ga0207667_10257077 3300025949 Unclassified 1786
110 Ga0207651_10000057 3300025960 Bacteria 49334
111 Ga0207640_10000011 3300025981 Bacteria 252283
112 Ga0207658_10132101 3300025986 Bacteria 2007
113 Ga0207658_10150054 3300025986 Bacteria 1898
114 Ga0207703_10098124 3300026035 Bacteria 2477
115 Ga0207702_10000021 3300026078 Bacteria 196115
116 Ga0207702_10001285 3300026078 Bacteria 25172
117 Ga0207674_10000134 3300026116 Bacteria 86377
118 Ga0207683_10003324 3300026121 Bacteria 14013
119 Ga0209981_1000043 3300027378 Bacteria 12361
120 Ga0307515_10000009 3300028794 Bacteria 653206
121 Ga0307515_10053848 3300028794 Bacteria 5922
122 Ga0265338_10010668 3300028800 Bacteria 10737
123 Ga0265338_10074126 3300028800 Bacteria 2897
124 Ga0265330_10008255 3300031235 Bacteria 5018
125 Ga0265328_10051397 3300031239 Bacteria 1513
126 Ga0265320_10000034 3300031240 Bacteria 141117
127 Ga0265325_10000365 3300031241 Bacteria 31743
128 Ga0265325_10031834 3300031241 Bacteria 2819
129 Ga0265340_10001857 3300031247 Bacteria 12050
130 Ga0265340_10015873 3300031247 Bacteria 3906
131 Ga0265339_10000138 3300031249 Bacteria 60256
132 Ga0265339_10029464 3300031249 Bacteria 3114
133 Ga0265339_10037389 3300031249 Bacteria 2713
134 Ga0265331_10003524 3300031250 Bacteria 10067
135 Ga0265331_10082137 3300031250 Bacteria 1495
136 Ga0265327_10000337 3300031251 Bacteria 89213
137 Ga0265316_10159766 3300031344 Bacteria 1685
138 Ga0307513_10232327 3300031456 Bacteria 1656
139 Ga0265313_10010011 3300031595 Bacteria 6070
140 Ga0265313_10023122 3300031595 Bacteria 3355
141 Ga0307514_10018730 3300031649 Bacteria 5673
142 Ga0265342_10003123 3300031712 Bacteria 13847
143 Ga0307406_10044841 3300031901 Bacteria 2773
144 Ga0307416_100001825 3300032002 Bacteria 11850
145 Ga0307411_10041040 3300032005 Bacteria 2941
146 Ga0307415_100058169 3300032126 Bacteria 2660
147 Ga0307507_10009217 3300033179 Bacteria 13245
148 Ga0373954_0086161 3300035118 Bacteria 1505
149 Ga0373955_0088661 3300035172 Bacteria 1760
150 Ga0373935_0062606 3300035692 Bacteria 2383
151 Ga0373933_0040295 3300035724 Bacteria 2751
152 Ga0373937_0017402 3300036401 Bacteria 6402
153 Ga0373937_0046162 3300036401 Bacteria 3983
154 Ga0373937_0049046 3300036401 Bacteria 3866
155 Ga0373925_0091973 3300037068 Bacteria 2320
156 Ga0373925_0112357 3300037068 Bacteria 2106
157 Ga0395899_0034490 3300037312 Bacteria 3801
158 Ga0395905_0004157 3300037471 Bacteria 15144
159 Ga0395905_0128356 3300037471 Bacteria 2385
160 Ga0436360_1353270 3300039438 Bacteria 4524
161 Ga0436362_0002923 3300039453 Bacteria 2352
162 Ga0466966_0019955 3300044684 Bacteria 4408
163 Ga0466967_0057806 3300045976 Bacteria 3426
164 Ga0495627_000399 3300046453 Bacteria 38947
165 Ga0495638_0002401 3300046460 Bacteria 15333
166 Ga0495616_0000160 3300046513 Bacteria 58888
167 Ga0495630_0117913 3300046517 Bacteria 2013
168 Ga0495648_0003899 3300046524 Bacteria 12931
169 Ga0495656_0078013 3300046615 Bacteria 1488
170 Ga0495635_0038567 3300046663 Bacteria 3307
171 Ga0495657_0030487 3300046675 Unclassified 3777
172 Ga0495657_0056080 3300046675 Bacteria 2626
173 Ga0495623_0027902 3300046679 Bacteria 3634
174 Ga0495672_0035511 3300047320 Bacteria 3070
175 Ga0495680_0007528 3300047322 Bacteria 9966
176 Ga0495673_0003374 3300047469 Bacteria 10561
177 Ga0495673_0003560 3300047469 Bacteria 10248
178 Ga0495686_0007217 3300047472 Bacteria 8368
179 Ga0495686_0026520 3300047472 Bacteria 3790
180 Ga0495602_0071798 3300048088 Bacteria 2955
181 Ga0496102_0094927 3300048905 Bacteria 2764
182 Ga0496104_0357160 3300048907 Bacteria 1374
183 Ga0496106_0061412 3300048909 Bacteria 2851
184 Ga0496108_0027639 3300048911 Bacteria 4689
185 Ga0496109_0000026 3300048912 Bacteria 171405
186 Ga0496112_0140571 3300048915 Bacteria 2384
187 Ga0496114_0026825 3300048917 Bacteria 4719
188 Ga0496121_0079830 3300048924 Bacteria 2596
189 Ga0496126_0000778 3300048929 Bacteria 57576
190 Ga0501031_0086548 3300049568 Bacteria 2043
191 Ga0501032_0005157 3300049569 Bacteria 9743
192 Ga0501033_0000744 3300049570 Bacteria 29957
193 Ga0501033_0007274 3300049570 Bacteria 8634
194 Ga0501034_0199321 3300049571 Bacteria 1960
195 Ga0501036_0019927 3300049572 Bacteria 5630
196 Ga0501037_0008967 3300049573 Bacteria 7325
197 Ga0501037_0028300 3300049573 Bacteria 4140
198 Ga0501038_0001195 3300049574 Bacteria 23611
199 Ga0501039_0001824 3300049575 Bacteria 15749
200 Ga0501043_0000830 3300049579 Bacteria 27448
201 Ga0501046_0004150 3300049580 Bacteria 13196
202 Ga0501047_0007268 3300049581 Bacteria 10409
203 Ga0501067_0042694 3300049583 Bacteria 2517
204 Ga0501068_0008046 3300049584 Bacteria 5847
205 Ga0501070_0008942 3300049586 Bacteria 8468
206 Ga0501073_0018446 3300049589 Bacteria 5043
207 Ga0501074_0009302 3300049590 Bacteria 7137
208 Ga0501080_0004705 3300049742 Bacteria 12181
209 Ga0501083_0086917 3300049744 Bacteria 2067
210 Ga0501035_0011774 3300049822 Bacteria 8098
211 Ga0501044_0009379 3300049823 Bacteria 10666
212 Ga0501044_0040093 3300049823 Bacteria 4883
213 Ga0501045_0042317 3300049824 Bacteria 3316
214 nmdc:mga0k408_15696_c1 3300050493 Bacteria 4193
215 nmdc:mga0n895_126812_c1 3300050512 Bacteria 2576
216 nmdc:mga0rr50_11670_c1 3300050513 Bacteria 5638
217 nmdc:mga08x19_54_c1 3300050514 Bacteria 121662
218 Ga0500643_001447 3300053087 Bacteria 13677
219 Ga0500643_009343 3300053087 Bacteria 3752
220 Ga0500643_017897 3300053087 Bacteria 2362
221 Ga0500644_0000193 3300053088 Bacteria 37831
222 Ga0500556_0001817 3300053104 Bacteria 7828
223 Ga0500556_0035361 3300053104 Bacteria 1725
224 Ga0500562_000460 3300053108 Bacteria 9870
225 Ga0500595_004201 3300053119 Bacteria 6516
226 Ga0500559_0007626 3300053136 Bacteria 4778
227 Ga0500564_000135 3300053138 Bacteria 19069
228 Ga0500616_0014375 3300053153 Bacteria 4551
229 Ga0500616_0023672 3300053153 Bacteria 3420
230 Ga0500622_0018987 3300053156 Bacteria 3652
231 Ga0500622_0046113 3300053156 Bacteria 2254
232 Ga0500636_0016400 3300053177 Bacteria 4369
233 Ga0500645_001278 3300053730 Bacteria 13167
234 Ga0500645_005648 3300053730 Bacteria 4571
235 Ga0500609_000081 3300053731 Bacteria 12301
236 Ga0501084_0022666 3300054114 Bacteria 5241
237 Ga0501082_0009817 3300060353 Bacteria 8246

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035118 Ga0373954_0086161 Ga0373954_0086161_23_1096 357
2 3300046517 Ga0495630_0117913 Ga0495630_0117913_15_1100 357
3 3300048915 Ga0496112_0140571 Ga0496112_0140571_42_1127 357
4 3300005365 Ga0070688_100129120 Ga0070688_1001291202 366
5 3300048907 Ga0496104_0357160 Ga0496104_0357160_31_1158 371
6 3300048909 Ga0496106_0061412 Ga0496106_0061412_239_1480 373
7 3300049568 Ga0501031_0086548 Ga0501031_0086548_415_1644 376
8 3300049569 Ga0501032_0005157 Ga0501032_0005157_2465_3694 376
9 3300049570 Ga0501033_0000744 Ga0501033_0000744_21525_22754 376
10 3300049571 Ga0501034_0199321 Ga0501034_0199321_18_1247 376
11 3300049572 Ga0501036_0019927 Ga0501036_0019927_4065_5294 376
12 3300049573 Ga0501037_0008967 Ga0501037_0008967_5918_7147 376
13 3300049574 Ga0501038_0001195 Ga0501038_0001195_6639_7868 376
14 3300049575 Ga0501039_0001824 Ga0501039_0001824_12335_13564 376
15 3300049579 Ga0501043_0000830 Ga0501043_0000830_19707_20936 376
16 3300049580 Ga0501046_0004150 Ga0501046_0004150_288_1517 376
17 3300049583 Ga0501067_0042694 Ga0501067_0042694_1006_2235 376
18 3300049584 Ga0501068_0008046 Ga0501068_0008046_260_1489 376
19 3300049586 Ga0501070_0008942 Ga0501070_0008942_5356_6585 376
20 3300049589 Ga0501073_0018446 Ga0501073_0018446_2318_3547 376
21 3300049590 Ga0501074_0009302 Ga0501074_0009302_615_1844 376
22 3300049742 Ga0501080_0004705 Ga0501080_0004705_8505_9734 376
23 3300049744 Ga0501083_0086917 Ga0501083_0086917_416_1645 376
24 3300049822 Ga0501035_0011774 Ga0501035_0011774_5861_7090 376
25 3300049823 Ga0501044_0009379 Ga0501044_0009379_288_1517 376
26 3300049824 Ga0501045_0042317 Ga0501045_0042317_169_1398 376
27 3300054114 Ga0501084_0022666 Ga0501084_0022666_3406_4635 376
28 3300060353 Ga0501082_0009817 Ga0501082_0009817_2012_3241 376
29 3300049570 Ga0501033_0007274 Ga0501033_0007274_525_1793 378
30 3300049573 Ga0501037_0028300 Ga0501037_0028300_70_1338 378
31 3300049823 Ga0501044_0040093 Ga0501044_0040093_3190_4458 378
32 3300028794 Ga0307515_10000009 Ga0307515_10000009448 379
33 3300031649 Ga0307514_10018730 Ga0307514_100187303 379
34 3300005983 Ga0081540_1046705 Ga0081540_10467052 380
35 3300050512 nmdc:mga0n895_126812_c1 nmdc:mga0n895_126812_c1_808_2070 384
36 3300035724 Ga0373933_0040295 Ga0373933_0040295_456_1718 386
37 3300036401 Ga0373937_0049046 Ga0373937_0049046_1744_3006 386
38 3300046675 Ga0495657_0056080 Ga0495657_0056080_1331_2593 386
39 3300046679 Ga0495623_0027902 Ga0495623_0027902_258_1520 386
40 3300048088 Ga0495602_0071798 Ga0495602_0071798_456_1718 386
41 3300005434 Ga0070709_10000408 Ga0070709_1000040812 387
42 3300005435 Ga0070714_100006162 Ga0070714_1000061627 387
43 3300005436 Ga0070713_100000333 Ga0070713_10000033317 387
44 3300005614 Ga0068856_100000601 Ga0068856_10000060138 387
45 3300006173 Ga0070716_100033698 Ga0070716_1000336982 387
46 3300006175 Ga0070712_100000023 Ga0070712_10000002365 387
47 3300006914 Ga0075436_100000211 Ga0075436_10000021114 387
48 3300007076 Ga0075435_100002305 Ga0075435_1000023053 387
49 3300014968 Ga0157379_10009508 Ga0157379_100095087 387
50 3300025906 Ga0207699_10000280 Ga0207699_1000028019 387
51 3300025915 Ga0207693_10000018 Ga0207693_10000018128 387
52 3300025928 Ga0207700_10000026 Ga0207700_1000002649 387
53 3300025929 Ga0207664_10055790 Ga0207664_100557902 387
54 3300026078 Ga0207702_10000021 Ga0207702_10000021198 387
55 3300037471 Ga0395905_0128356 Ga0395905_0128356_807_2030 387
56 3300044684 Ga0466966_0019955 Ga0466966_0019955_2316_3572 387
57 3300050513 nmdc:mga0rr50_11670_c1 nmdc:mga0rr50_11670_c1_1667_2929 387
58 3300050514 nmdc:mga08x19_54_c1 nmdc:mga08x19_54_c1_77494_78756 387
59 3300006358 Ga0068871_100242999 Ga0068871_1002429992 388
60 3300033179 Ga0307507_10009217 Ga0307507_100092177 388
61 3300048929 Ga0496126_0000778 Ga0496126_0000778_19984_21252 388
62 3300050493 nmdc:mga0k408_15696_c1 nmdc:mga0k408_15696_c1_2670_3911 388
63 3300009148 Ga0105243_10323082 Ga0105243_103230821 390
64 3300005341 Ga0070691_10000339 Ga0070691_100003393 391
65 3300005434 Ga0070709_10014232 Ga0070709_100142323 391
66 3300005539 Ga0068853_100162647 Ga0068853_1001626472 391
67 3300005545 Ga0070695_100063839 Ga0070695_1000638392 391
68 3300005577 Ga0068857_100001587 Ga0068857_1000015876 391
69 3300005578 Ga0068854_100028475 Ga0068854_1000284752 391
70 3300005614 Ga0068856_100001518 Ga0068856_10000151812 391
71 3300006914 Ga0075436_100006135 Ga0075436_1000061355 391
72 3300009174 Ga0105241_10014169 Ga0105241_100141693 391
73 3300009176 Ga0105242_10253376 Ga0105242_102533762 391
74 3300009545 Ga0105237_10030554 Ga0105237_100305544 391
75 3300009551 Ga0105238_10006744 Ga0105238_100067443 391
76 3300013100 Ga0157373_10001642 Ga0157373_100016429 391
77 3300013104 Ga0157370_10012463 Ga0157370_100124633 391
78 3300013105 Ga0157369_10014455 Ga0157369_1001445510 391
79 3300013307 Ga0157372_10121683 Ga0157372_101216833 391
80 3300014968 Ga0157379_10138799 Ga0157379_101387992 391
81 3300025913 Ga0207695_10107929 Ga0207695_101079293 391
82 3300025914 Ga0207671_10127785 Ga0207671_101277852 391
83 3300025949 Ga0207667_10106293 Ga0207667_101062933 391
84 3300026078 Ga0207702_10001285 Ga0207702_100012859 391
85 3300026116 Ga0207674_10000134 Ga0207674_1000013436 391
86 3300031235 Ga0265330_10008255 Ga0265330_100082552 391
87 3300031247 Ga0265340_10001857 Ga0265340_100018572 391
88 3300031595 Ga0265313_10010011 Ga0265313_100100116 391
89 3300031712 Ga0265342_10003123 Ga0265342_100031237 391
90 3300031901 Ga0307406_10044841 Ga0307406_100448413 391
91 3300032002 Ga0307416_100001825 Ga0307416_1000018257 391
92 3300032126 Ga0307415_100058169 Ga0307415_1000581692 391
93 3300053177 Ga0500636_0016400 Ga0500636_0016400_1762_3021 391
94 3300031249 Ga0265339_10000138 Ga0265339_100001383 392
95 3300031250 Ga0265331_10003524 Ga0265331_100035248 392
96 3300007788 Ga0099795_10010184 Ga0099795_100101842 393
97 3300010159 Ga0099796_10003221 Ga0099796_100032213 393
98 3300053087 Ga0500643_009343 Ga0500643_009343_1640_2884 393
99 3300053104 Ga0500556_0001817 Ga0500556_0001817_2242_3486 393
100 3300053108 Ga0500562_000460 Ga0500562_000460_321_1565 393
101 3300053153 Ga0500616_0014375 Ga0500616_0014375_2349_3593 393
102 3300053730 Ga0500645_005648 Ga0500645_005648_361_1605 393
103 3300031247 Ga0265340_10015873 Ga0265340_100158733 395
104 3300031344 Ga0265316_10159766 Ga0265316_101597662 395
105 3300035172 Ga0373955_0088661 Ga0373955_0088661_408_1658 395
106 3300053156 Ga0500622_0018987 Ga0500622_0018987_60_1313 395
107 3300007265 Ga0099794_10049147 Ga0099794_100491472 396
108 3300046615 Ga0495656_0078013 Ga0495656_0078013_150_1388 396
109 3300053087 Ga0500643_001447 Ga0500643_001447_271_1524 396
110 3300053104 Ga0500556_0035361 Ga0500556_0035361_263_1516 396
111 3300053156 Ga0500622_0046113 Ga0500622_0046113_630_1883 396
112 3300053730 Ga0500645_001278 Ga0500645_001278_7977_9230 396
113 3300005842 Ga0068858_100120396 Ga0068858_1001203962 397
114 3300014968 Ga0157379_10008978 Ga0157379_100089783 397
115 3300026035 Ga0207703_10098124 Ga0207703_100981242 397
116 3300009093 Ga0105240_10065152 Ga0105240_100651524 398
117 3300031239 Ga0265328_10051397 Ga0265328_100513972 400
118 3300047320 Ga0495672_0035511 Ga0495672_0035511_1097_2377 401
119 3300005468 Ga0070707_100000005 Ga0070707_10000000547 402
120 3300005518 Ga0070699_100018141 Ga0070699_1000181415 402
121 3300005536 Ga0070697_100009273 Ga0070697_1000092735 402
122 3300025922 Ga0207646_10000022 Ga0207646_1000002298 402
123 3300053119 Ga0500595_004201 Ga0500595_004201_570_1856 402
124 3300053153 Ga0500616_0023672 Ga0500616_0023672_171_1487 403
125 3300014968 Ga0157379_10346072 Ga0157379_103460721 404
126 3300031249 Ga0265339_10029464 Ga0265339_100294643 404
127 3300046460 Ga0495638_0002401 Ga0495638_0002401_7536_8783 404
128 3300046513 Ga0495616_0000160 Ga0495616_0000160_8727_9983 404
129 3300053731 Ga0500609_000081 Ga0500609_000081_5382_6638 404
130 3300005458 Ga0070681_10006326 Ga0070681_100063265 405
131 3300025912 Ga0207707_10009488 Ga0207707_100094883 405
132 3300031250 Ga0265331_10082137 Ga0265331_100821371 405
133 3300032005 Ga0307411_10041040 Ga0307411_100410404 405
134 3300005439 Ga0070711_100109413 Ga0070711_1001094132 406
135 3300005543 Ga0070672_100002326 Ga0070672_10000232612 406
136 3300005614 Ga0068856_100192015 Ga0068856_1001920152 406
137 3300006175 Ga0070712_100000803 Ga0070712_10000080311 406
138 3300014968 Ga0157379_10008855 Ga0157379_100088553 406
139 3300025915 Ga0207693_10000534 Ga0207693_1000053411 406
140 3300025916 Ga0207663_10019060 Ga0207663_100190602 406
141 3300036401 Ga0373937_0017402 Ga0373937_0017402_4545_5804 406
142 3300039438 Ga0436360_1353270 Ga0436360_1353270_2215_3492 406
143 3300035692 Ga0373935_0062606 Ga0373935_0062606_367_1644 407
144 3300036401 Ga0373937_0046162 Ga0373937_0046162_1183_2502 407
145 3300037068 Ga0373925_0091973 Ga0373925_0091973_62_1339 407
146 3300045976 Ga0466967_0057806 Ga0466967_0057806_2064_3320 407
147 3300048905 Ga0496102_0094927 Ga0496102_0094927_1100_2347 407
148 3300005335 Ga0070666_10000276 Ga0070666_1000027635 408
149 3300005367 Ga0070667_100147517 Ga0070667_1001475172 408
150 3300005539 Ga0068853_100282516 Ga0068853_1002825162 408
151 3300005547 Ga0070693_100001504 Ga0070693_1000015045 408
152 3300005563 Ga0068855_100010386 Ga0068855_1000103862 408
153 3300009093 Ga0105240_10003148 Ga0105240_1000314822 408
154 3300009093 Ga0105240_10022786 Ga0105240_100227863 408
155 3300009177 Ga0105248_10004097 Ga0105248_100040976 408
156 3300021384 Ga0213876_10026768 Ga0213876_100267683 408
157 3300025903 Ga0207680_10001634 Ga0207680_100016343 408
158 3300025913 Ga0207695_10002640 Ga0207695_1000264022 408
159 3300025913 Ga0207695_10018366 Ga0207695_100183663 408
160 3300025941 Ga0207711_10003490 Ga0207711_100034906 408
161 3300025986 Ga0207658_10132101 Ga0207658_101321012 408
162 3300028800 Ga0265338_10074126 Ga0265338_100741262 408
163 3300031240 Ga0265320_10000034 Ga0265320_1000003449 408
164 3300031241 Ga0265325_10000365 Ga0265325_1000036510 408
165 3300031241 Ga0265325_10031834 Ga0265325_100318342 408
166 3300031251 Ga0265327_10000337 Ga0265327_1000033752 408
167 3300031595 Ga0265313_10023122 Ga0265313_100231222 408
168 3300039453 Ga0436362_0002923 Ga0436362_0002923_1041_2300 408
169 3300047472 Ga0495686_0007217 Ga0495686_0007217_2236_3468 408
170 3300048912 Ga0496109_0000026 Ga0496109_0000026_73839_75068 408
171 3300028800 Ga0265338_10010668 Ga0265338_100106686 409
172 3300025949 Ga0207667_10257077 Ga0207667_102570771 410
173 3300031249 Ga0265339_10037389 Ga0265339_100373892 410
174 3300009094 Ga0111539_10007547 Ga0111539_100075474 411
175 3300037068 Ga0373925_0112357 Ga0373925_0112357_573_1826 411
176 3300037312 Ga0395899_0034490 Ga0395899_0034490_1501_2778 411
177 3300037471 Ga0395905_0004157 Ga0395905_0004157_11839_13116 411
178 3300046663 Ga0495635_0038567 Ga0495635_0038567_2030_3283 411
179 3300046675 Ga0495657_0030487 Ga0495657_0030487_2442_3695 411
180 3300047322 Ga0495680_0007528 Ga0495680_0007528_7345_8598 411
181 3300048924 Ga0496121_0079830 Ga0496121_0079830_588_1823 411
182 iso_pu_bacteria 2791355048 2792463746 411
183 iso_pu_bacteria 2843744320 2843747119 411
184 iso_pu_bacteria 2849560528 2849560657 411
185 iso_pu_bacteria 2849573788 2849578498 411
186 iso_pu_bacteria 2851153111 2851154258 411
187 iso_pu_bacteria 2898329390 2898331337 411
188 3300005335 Ga0070666_10035582 Ga0070666_100355822 412
189 3300005339 Ga0070660_100003643 Ga0070660_1000036437 412
190 3300005354 Ga0070675_100014949 Ga0070675_1000149491 412
191 3300005355 Ga0070671_100112357 Ga0070671_1001123572 412
192 3300005356 Ga0070674_100006141 Ga0070674_1000061414 412
193 3300005364 Ga0070673_100013052 Ga0070673_1000130524 412
194 3300005366 Ga0070659_100002974 Ga0070659_1000029743 412
195 3300005438 Ga0070701_10105232 Ga0070701_101052321 412
196 3300005456 Ga0070678_100003632 Ga0070678_1000036324 412
197 3300005543 Ga0070672_100000110 Ga0070672_10000011032 412
198 3300005548 Ga0070665_100185531 Ga0070665_1001855312 412
199 3300005578 Ga0068854_100000055 Ga0068854_1000000553 412
200 3300006237 Ga0097621_100034950 Ga0097621_1000349503 412
201 3300006358 Ga0068871_100073840 Ga0068871_1000738402 412
202 3300006881 Ga0068865_100220066 Ga0068865_1002200661 412
203 3300009093 Ga0105240_10014862 Ga0105240_100148623 412
204 3300009094 Ga0111539_10032622 Ga0111539_100326223 412
205 3300013102 Ga0157371_10063655 Ga0157371_100636552 412
206 3300013104 Ga0157370_10009389 Ga0157370_100093897 412
207 3300013297 Ga0157378_10013492 Ga0157378_100134922 412
208 3300013308 Ga0157375_10001127 Ga0157375_100011272 412
209 3300014969 Ga0157376_10069892 Ga0157376_100698921 412
210 3300025903 Ga0207680_10009383 Ga0207680_100093834 412
211 3300025907 Ga0207645_10010327 Ga0207645_100103276 412
212 3300025913 Ga0207695_10154700 Ga0207695_101547002 412
213 3300025919 Ga0207657_10008295 Ga0207657_100082953 412
214 3300025926 Ga0207659_10051703 Ga0207659_100517032 412
215 3300025931 Ga0207644_10188534 Ga0207644_101885341 412
216 3300025932 Ga0207690_10004051 Ga0207690_100040513 412
217 3300025933 Ga0207706_10020078 Ga0207706_100200782 412
218 3300025937 Ga0207669_10016874 Ga0207669_100168744 412
219 3300025940 Ga0207691_10000261 Ga0207691_100002613 412
220 3300025960 Ga0207651_10000057 Ga0207651_1000005747 412
221 3300025981 Ga0207640_10000011 Ga0207640_10000011198 412
222 3300025986 Ga0207658_10150054 Ga0207658_101500542 412
223 3300026121 Ga0207683_10003324 Ga0207683_100033245 412
224 3300031456 Ga0307513_10232327 Ga0307513_102323272 412
225 3300048911 Ga0496108_0027639 Ga0496108_0027639_1100_2356 412
226 3300048917 Ga0496114_0026825 Ga0496114_0026825_2355_3611 412
227 3300005547 Ga0070693_100144551 Ga0070693_1001445511 413
228 3300025250 Ga0209026_1000653 Ga0209026_100065313 413
229 3300046524 Ga0495648_0003899 Ga0495648_0003899_7197_8441 414
230 3300047469 Ga0495673_0003560 Ga0495673_0003560_6723_7967 414
231 3300049581 Ga0501047_0007268 Ga0501047_0007268_5554_6825 414
232 3300053087 Ga0500643_017897 Ga0500643_017897_653_1897 414
233 3300053088 Ga0500644_0000193 Ga0500644_0000193_33610_34854 414
234 3300053138 Ga0500564_000135 Ga0500564_000135_7828_9072 414
235 3300003790 Ga0055528_1014132 Ga0055528_10141322 415
236 3300005336 Ga0070680_100027254 Ga0070680_1000272543 415
237 3300025299 Ga0209256_1017414 Ga0209256_10174142 415
238 3300027378 Ga0209981_1000043 Ga0209981_100004317 415
239 3300028794 Ga0307515_10053848 Ga0307515_100538488 415
240 3300046453 Ga0495627_000399 Ga0495627_000399_23870_25117 415
241 3300047469 Ga0495673_0003374 Ga0495673_0003374_5736_6983 415
242 3300047472 Ga0495686_0026520 Ga0495686_0026520_2409_3656 415
243 3300053136 Ga0500559_0007626 Ga0500559_0007626_1644_2900 415

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

51

398

0.88

PF00083

Sugar_tr

Sugar (and other) transporter

46

230

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.8397 10 407
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.8338 10 407
8g92-assembly1.cif.gz_A structure of inhibitor 16d-bound spns2 0.8306 10 405
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.8279 11 409
8ex4-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1) 0.8273 10 405
ID Description Score Start End Superfamily
af_A0A1D6MTK3_190_317_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9293 52 165 1.20.1250.20
af_Q0IUK3_10_423_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9205 14 409 1.20.1250.20
af_Q2G1N0_6_195_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9174 10 195 1.20.1250.20
af_Q9UAZ6_8_435_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.911 17 403 1.20.1250.20
af_Q9VPD9_21_231_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9082 14 194 1.20.1250.20
ID Description Score Start End GO Terms
AF-Q9A8S0-F1-model_v4 Tetracycline resistance protein 0.9875 1 415 GO:0005886
GO:0022857
AF-A0A2V5XXJ7-F1-model_v4 Tetracycline resistance MFS efflux pump 0.9863 11 391 GO:0005886
GO:0022857
AF-Q9A8S0-F1-model_v4 Tetracycline resistance protein 0.9852 1 415 GO:0005886
GO:0022857
AF-A0A5B2Z858-F1-model_v4 TCR/Tet family MFS transporter 0.9846 10 407 GO:0005886
GO:0022857
AF-A0A536KQ77-F1-model_v4 MFS transporter 0.9821 10 403 GO:0005886
GO:0015297
GO:0046677
GO:0052689
GO:1902600

Feature Viewer

pLDDT pTM Quality
89.65 0.86 High
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Predicted Structure (AlphaFold2)

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