F355666

General Info

Members Datasets Scaffolds Average Seq Length
243 199 227 257

Family's Representative Sequence

Representative Sequence 3300025929|Ga0207664_10209018|Ga0207664_102090182
Length 260
Sequence MPGMKAVILAGGLGTRISEESTTRPKPMIEIGGRPILWHIMKIYSSHGINDFVVCCGYRGYVIKEYFANYFLHMSDVTFDMAQNRMEVHHAKAEPWRVTLVDTGEDTMTGGRLKRVQKYVEGEDFCFTYGDGVSDVDIGALVALHAKSGCHATLTAVQPPGRFGALDLDGTVVASFQEKPVGDGGWINGGFFVLEAPVLDLIAGDSIAWEQEPMKSLAANGDLCAYRHPGFWQPMDTLRDKQHLESLWRSGNAPWRVWES

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
4 2643221599 Rhizobium sp. Root708 Isolate Unclassified
5 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
6 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
7 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
8 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
9 2857553236 Duganella sp. R-74557 Isolate Unclassified
10 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
11 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
12 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
13 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
14 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
15 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
87 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
92 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
93 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
102 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
106 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
107 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
118 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
119 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
125 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
126 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
132 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
133 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
134 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
137 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
140 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
141 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
142 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
143 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
144 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
145 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
146 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
147 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
148 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
149 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
150 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
171 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
172 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
173 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
176 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
177 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
178 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
181 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
184 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
185 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
186 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
187 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
188 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
189 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
192 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
193 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
194 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
195 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
196 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
197 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
198 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
199 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.59
Metatranscriptomes 0.41
Isolates 7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.52
Nodule 1.23
Rhizoplane 2.88
Rhizosphere 59.26
Stem 0
Stem Tuber 0
Unclassified 18.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10008041 3300003203 Bacteria 4789
2 rootH1_10023399 3300003316 Bacteria 14787
3 rootH1_10023399 3300003323 Bacteria 18842
4 rootL2_10048027 3300003322 Bacteria 22252
5 rootH1_10140496 3300003323 Bacteria 4626
6 Ga0055540_1016435 3300003792 Bacteria 2106
7 Ga0055531_10001660 3300003794 Bacteria 16067
8 Ga0065704_10078023 3300005289 Bacteria 4547
9 Ga0065704_10145825 3300005289 Bacteria 1473
10 Ga0070666_10052278 3300005335 Bacteria 2753
11 Ga0070668_100733993 3300005347 Bacteria 873
12 Ga0070659_100001578 3300005366 Bacteria 16406
13 Ga0070667_100000298 3300005367 Bacteria 55786
14 Ga0070714_100204472 3300005435 Bacteria 1808
15 Ga0070711_100142806 3300005439 Bacteria 1797
16 Ga0070678_100049310 3300005456 Bacteria 3038
17 Ga0068867_100000453 3300005459 Bacteria 27171
18 Ga0068853_100110998 3300005539 Bacteria 2436
19 Ga0070696_100019258 3300005546 Bacteria 4621
20 Ga0070664_100172875 3300005564 Bacteria 1917
21 Ga0068852_100059917 3300005616 Bacteria 3303
22 Ga0068863_100003486 3300005841 Bacteria 15521
23 Ga0068860_100000412 3300005843 Bacteria 55786
24 Ga0081540_1008950 3300005983 Bacteria 6933
25 Ga0081539_10000654 3300005985 Bacteria 69664
26 Ga0075363_100006457 3300006048 Bacteria 5326
27 Ga0075362_10000008 3300006177 Bacteria 112391
28 Ga0075367_10013968 3300006178 Bacteria 4335
29 Ga0075367_10210118 3300006178 Bacteria 1217
30 Ga0075366_10002931 3300006195 Bacteria 8872
31 Ga0075366_10016417 3300006195 Bacteria 4255
32 Ga0075366_10055732 3300006195 Bacteria 2347
33 Ga0075370_10005871 3300006353 Bacteria 6136
34 Ga0075370_10024407 3300006353 Bacteria 3339
35 Ga0068871_100624745 3300006358 Bacteria 981
36 Ga0099823_1000804 3300006944 Bacteria 23356
37 Ga0105240_10014176 3300009093 Bacteria 10888
38 Ga0105240_10024606 3300009093 Bacteria 7931
39 Ga0105240_10327326 3300009093 Bacteria 1745
40 Ga0105240_10765252 3300009093 Bacteria 1049
41 Ga0105243_10002357 3300009148 Bacteria 15813
42 Ga0105243_10318563 3300009148 Bacteria 1416
43 Ga0105241_10012640 3300009174 Bacteria 6196
44 Ga0105242_10002227 3300009176 Bacteria 15303
45 Ga0105237_10000870 3300009545 Bacteria 41025
46 Ga0105237_10011799 3300009545 Bacteria 9244
47 Ga0105238_10002779 3300009551 Bacteria 17469
48 Ga0105239_10003619 3300010375 Bacteria 18887
49 Ga0105246_10000244 3300011119 Bacteria 27958
50 Ga0157373_10074669 3300013100 Bacteria 2392
51 Ga0157369_10058200 3300013105 Bacteria 4168
52 Ga0157372_10017934 3300013307 Bacteria 7607
53 Ga0157377_10000088 3300014745 Bacteria 67719
54 Ga0182006_1000366 3300015261 Bacteria 37493
55 Ga0182007_10000021 3300015262 Bacteria 193408
56 Ga0182005_1014686 3300015265 Bacteria 2190
57 Ga0163161_10039730 3300017792 Bacteria 3379
58 Ga0213875_10002601 3300021388 Bacteria 10722
59 Ga0209759_1000574 3300025256 Bacteria 36692
60 Ga0209759_1003483 3300025256 Bacteria 6241
61 Ga0209233_1004365 3300025261 Bacteria 4821
62 Ga0209673_1004452 3300025273 Bacteria 7498
63 Ga0209673_1005299 3300025273 Bacteria 6540
64 Ga0209050_1004070 3300025298 Bacteria 10233
65 Ga0209050_1038984 3300025298 Bacteria 1345
66 Ga0209256_1000424 3300025299 Bacteria 66333
67 Ga0209256_1002394 3300025299 Bacteria 15451
68 Ga0209051_1000469 3300025303 Bacteria 52936
69 Ga0209051_1001522 3300025303 Bacteria 19290
70 Ga0209257_1002583 3300025304 Bacteria 17605
71 Ga0207655_1001036 3300025728 Bacteria 28029
72 Ga0207654_10001203 3300025911 Bacteria 13874
73 Ga0207695_10012403 3300025913 Bacteria 10235
74 Ga0207671_10005480 3300025914 Bacteria 11680
75 Ga0207694_10007525 3300025924 Bacteria 8254
76 Ga0207664_10209018 3300025929 Bacteria 1688
77 Ga0207690_10010145 3300025932 Bacteria 5595
78 Ga0207686_10025577 3300025934 Bacteria 3435
79 Ga0207709_10005919 3300025935 Bacteria 6898
80 Ga0207709_10150628 3300025935 Bacteria 1611
81 Ga0207679_10247384 3300025945 Bacteria 1514
82 Ga0207667_10593221 3300025949 Bacteria 1118
83 Ga0207658_10000254 3300025986 Bacteria 55800
84 Ga0207639_10093891 3300026041 Bacteria 2407
85 Ga0207641_10002044 3300026088 Bacteria 19204
86 Ga0207648_10000019 3300026089 Bacteria 144209
87 Ga0207683_10067604 3300026121 Bacteria 3153
88 Ga0207698_10085477 3300026142 Bacteria 2562
89 Ga0209389_1000523 3300027296 Bacteria 23302
90 Ga0209974_10001360 3300027876 Bacteria 8805
91 Ga0268264_10000083 3300028381 Bacteria 245366
92 Ga0265336_10000121 3300028666 Bacteria 58209
93 Ga0307515_10003180 3300028794 Bacteria 34757
94 Ga0307515_10034203 3300028794 Bacteria 8333
95 Ga0265324_10000630 3300029957 Bacteria 24053
96 Ga0268256_1038204 3300030500 Bacteria 1093
97 Ga0265328_10011150 3300031239 Bacteria 3599
98 Ga0265340_10088385 3300031247 Bacteria 1452
99 Ga0265331_10001541 3300031250 Bacteria 16945
100 Ga0265327_10000012 3300031251 Bacteria 530403
101 Ga0265327_10002226 3300031251 Bacteria 21110
102 Ga0265316_10064362 3300031344 Bacteria 2841
103 Ga0307509_10000904 3300031507 Bacteria 50711
104 Ga0307509_10180698 3300031507 Bacteria 1975
105 Ga0307408_100010473 3300031548 Bacteria 6114
106 Ga0307508_10048228 3300031616 Bacteria 3794
107 Ga0307514_10051350 3300031649 Bacteria 3196
108 Ga0307516_10001512 3300031730 Bacteria 32004
109 Ga0307507_10036058 3300033179 Bacteria 5065
110 Ga0307507_10093547 3300033179 Bacteria 2560
111 Ga0307510_10002154 3300033180 Bacteria 22232
112 Ga0307510_10177948 3300033180 Bacteria 1695
113 Ga0307510_10202177 3300033180 Bacteria 1520
114 Ga0373939_0066268 3300035114 Bacteria 1164
115 Ga0373960_0092730 3300035121 Bacteria 968
116 Ga0373943_0059995 3300035170 Bacteria 1898
117 Ga0373931_0012248 3300035691 Bacteria 4154
118 Ga0373935_0220655 3300035692 Bacteria 1317
119 Ga0373927_0374705 3300035695 Bacteria 938
120 Ga0373937_0185483 3300036401 Bacteria 1954
121 Ga0373925_0180134 3300037068 Bacteria 1672
122 Ga0395905_0000483 3300037471 Bacteria 54915
123 Ga0395905_0027937 3300037471 Bacteria 5320
124 Ga0395905_0031358 3300037471 Bacteria 5004
125 Ga0395905_0039896 3300037471 Bacteria 4404
126 Ga0436364_0049513 3300037853 Bacteria 17259
127 Ga0436364_0123768 3300037853 Bacteria 1167
128 Ga0436364_1447454 3300037853 Bacteria 10731
129 Ga0400490_55317 3300038726 Bacteria 5416
130 Ga0436365_0451816 3300039437 Bacteria 1729
131 Ga0436362_0164873 3300039453 Bacteria 1790
132 Ga0451798_0010289 3300041458 Bacteria 1856
133 Ga0450918_003165 3300042531 Bacteria 3069
134 Ga0451577_0039714 3300042876 Bacteria 4229
135 Ga0451577_0071577 3300042876 Bacteria 3092
136 Ga0466969_0013878 3300044656 Bacteria 4240
137 Ga0466972_0000788 3300044658 Bacteria 15044
138 Ga0453683_0011861 3300044673 Bacteria 5735
139 Ga0466965_0056235 3300044683 Bacteria 1959
140 Ga0466961_0000561 3300044693 Bacteria 23621
141 Ga0466964_0000965 3300044706 Bacteria 9512
142 Ga0453684_0182122 3300044712 Bacteria 2465
143 Ga0453684_0425721 3300044712 Bacteria 1482
144 Ga0466968_0018589 3300044735 Bacteria 2789
145 Ga0466968_0082189 3300044735 Bacteria 1417
146 Ga0466957_0014405 3300044842 Bacteria 4605
147 Ga0466957_0109275 3300044842 Bacteria 1752
148 Ga0451576_0016260 3300045051 Bacteria 8217
149 Ga0466958_0001672 3300045836 Bacteria 10697
150 Ga0466967_0789082 3300045976 Bacteria 943
151 Ga0495627_022302 3300046453 Bacteria 2085
152 Ga0495590_0002119 3300046457 Bacteria 8321
153 Ga0495590_0127462 3300046457 Bacteria 914
154 Ga0495650_0007909 3300046471 Bacteria 6305
155 Ga0495650_0026952 3300046471 Bacteria 2663
156 Ga0495639_0009955 3300046475 Bacteria 4086
157 Ga0495584_0066475 3300046491 Bacteria 1813
158 Ga0495585_0002217 3300046492 Bacteria 14070
159 Ga0495585_0038756 3300046492 Bacteria 2682
160 Ga0495596_0001107 3300046500 Bacteria 15956
161 Ga0495607_0085112 3300046501 Bacteria 1728
162 Ga0495583_0070072 3300046506 Bacteria 1543
163 Ga0495606_0004293 3300046507 Bacteria 14365
164 Ga0495610_0000505 3300046512 Bacteria 39813
165 Ga0495616_0159330 3300046513 Bacteria 1016
166 Ga0495648_0206299 3300046524 Bacteria 980
167 Ga0495642_0004309 3300046528 Bacteria 5528
168 Ga0495654_0000349 3300046530 Bacteria 39806
169 Ga0495622_0022114 3300046557 Bacteria 2963
170 Ga0495633_0017087 3300046558 Bacteria 3720
171 Ga0495668_0005007 3300046616 Bacteria 9149
172 Ga0495661_0002383 3300046665 Bacteria 14513
173 Ga0495661_0016781 3300046665 Bacteria 4844
174 Ga0495649_0000133 3300046694 Bacteria 65433
175 Ga0495686_0001970 3300047472 Bacteria 20400
176 Ga0495686_0261314 3300047472 Bacteria 969
177 Ga0495626_0001974 3300048091 Bacteria 15184
178 Ga0496104_0014671 3300048907 Bacteria 7078
179 Ga0496105_0001304 3300048908 Bacteria 17444
180 Ga0496111_0121705 3300048914 Bacteria 1927
181 Ga0496114_0004086 3300048917 Bacteria 11276
182 Ga0496115_0008806 3300048918 Bacteria 7478
183 Ga0496116_0041697 3300048919 Bacteria 3147
184 Ga0496116_0075986 3300048919 Bacteria 2106
185 Ga0496117_0000010 3300048920 Bacteria 611954
186 Ga0496118_0000009 3300048921 Bacteria 611954
187 Ga0496121_0002120 3300048924 Bacteria 31168
188 Ga0496121_0003426 3300048924 Bacteria 22673
189 Ga0496122_0079497 3300048925 Bacteria 2291
190 Ga0496123_0050659 3300048926 Bacteria 2772
191 Ga0496125_0024353 3300048928 Bacteria 5568
192 Ga0496125_0154136 3300048928 Bacteria 1572
193 Ga0496125_0325147 3300048928 Bacteria 930
194 Ga0496126_0003931 3300048929 Bacteria 18201
195 Ga0501315_000304 3300049531 Bacteria 3168
196 Ga0501036_0099522 3300049572 Bacteria 2459
197 Ga0501036_0476419 3300049572 Bacteria 1039
198 Ga0501211_001231 3300049658 Bacteria 2732
199 Ga0501235_028579 3300049669 Bacteria 1253
200 Ga0501238_010973 3300049671 Bacteria 1214
201 Ga0501272_003158 3300049769 Bacteria 1664
202 Ga0501044_0531419 3300049823 Bacteria 1075
203 nmdc:mga03683_15_c1 3300050489 Bacteria 102058
204 nmdc:mga03n38_128_c1 3300050490 Bacteria 16481
205 nmdc:mga0k408_30_c1 3300050493 Bacteria 89511
206 nmdc:mga0k408_8160_c1 3300050493 Bacteria 5610
207 nmdc:mga06z11_9006_c1 3300050494 Bacteria 4191
208 nmdc:mga07m45_14_c1 3300050496 Bacteria 154035
209 nmdc:mga07m45_23960_c1 3300050496 Bacteria 3339
210 nmdc:mga0sz30_2523_c1 3300050516 Bacteria 4708
211 Ga0500635_0000005 3300053080 Bacteria 187821
212 Ga0495619_0321792 3300053085 Bacteria 1071
213 Ga0500578_0000079 3300053086 Bacteria 107137
214 Ga0500644_0001698 3300053088 Bacteria 5739
215 Ga0500651_0092347 3300053093 Bacteria 1862
216 Ga0500650_0064037 3300053098 Bacteria 1718
217 Ga0500618_000774 3300053125 Bacteria 18011
218 Ga0500658_0025793 3300053134 Bacteria 2261
219 Ga0500559_0004165 3300053136 Bacteria 6938
220 Ga0500568_0008125 3300053139 Bacteria 5087
221 Ga0500577_0162468 3300053142 Bacteria 952
222 Ga0500604_0086669 3300053151 Bacteria 1018
223 Ga0500619_000059 3300053154 Bacteria 33814
224 Ga0500622_0054035 3300053156 Bacteria 2061
225 Ga0500624_021749 3300053157 Bacteria 1039
226 Ga0500587_000474 3300053739 Bacteria 4807
227 Ga0500587_005128 3300053739 Bacteria 1774

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2874620515 2874625088 242
2 iso_pu_bacteria 2904666416 2904666707 242
3 3300025261 Ga0209233_1004365 Ga0209233_10043654 246
4 iso_pu_bacteria 2857547612 2857548433 251
5 iso_pu_bacteria 3005594810 3005597118 251
6 iso_pu_bacteria 8006926726 8006933079 251
7 iso_pu_bacteria 2585428057 2587728095 252
8 iso_pu_bacteria 2585428058 2587731158 252
9 iso_pu_bacteria 2602042046 2603637067 252
10 iso_pu_bacteria 2738541276 2738714003 252
11 iso_pu_bacteria 2814123068 2814695632 252
12 iso_pu_bacteria 2839138175 2839140632 252
13 iso_pu_bacteria 2857553236 2857553994 252
14 iso_pu_bacteria 2919688452 2919688635 252
15 iso_pu_bacteria 8055225921 8055226155 252
16 iso_pu_bacteria 8055817908 8055819693 252
17 3300005335 Ga0070666_10052278 Ga0070666_100522782 254
18 3300005367 Ga0070667_100000298 Ga0070667_10000029835 254
19 3300005841 Ga0068863_100003486 Ga0068863_1000034868 254
20 3300005843 Ga0068860_100000412 Ga0068860_10000041236 254
21 3300025986 Ga0207658_10000254 Ga0207658_1000025435 254
22 3300026088 Ga0207641_10002044 Ga0207641_1000204416 254
23 3300028381 Ga0268264_10000083 Ga0268264_1000008335 254
24 3300003316 rootH1_10023399 rootH1_100233998 255
25 3300005289 Ga0065704_10078023 Ga0065704_100780235 255
26 3300005347 Ga0070668_100733993 Ga0070668_1007339931 255
27 3300005435 Ga0070714_100204472 Ga0070714_1002044722 255
28 3300006048 Ga0075363_100006457 Ga0075363_1000064573 255
29 3300006177 Ga0075362_10000008 Ga0075362_100000083 255
30 3300006178 Ga0075367_10013968 Ga0075367_100139684 255
31 3300006195 Ga0075366_10002931 Ga0075366_100029316 255
32 3300006353 Ga0075370_10005871 Ga0075370_100058712 255
33 3300006358 Ga0068871_100624745 Ga0068871_1006247452 255
34 3300009093 Ga0105240_10014176 Ga0105240_100141763 255
35 3300009093 Ga0105240_10327326 Ga0105240_103273262 255
36 3300009093 Ga0105240_10765252 Ga0105240_107652521 255
37 3300009545 Ga0105237_10011799 Ga0105237_100117999 255
38 3300015262 Ga0182007_10000021 Ga0182007_1000002132 255
39 3300015265 Ga0182005_1014686 Ga0182005_10146862 255
40 3300017792 Ga0163161_10039730 Ga0163161_100397302 255
41 3300025298 Ga0209050_1038984 Ga0209050_10389842 255
42 3300025913 Ga0207695_10012403 Ga0207695_1001240310 255
43 3300025929 Ga0207664_10209018 Ga0207664_102090182 255
44 3300025949 Ga0207667_10593221 Ga0207667_105932211 255
45 3300035114 Ga0373939_0066268 Ga0373939_0066268_273_1043 255
46 3300035121 Ga0373960_0092730 Ga0373960_0092730_73_843 255
47 3300035691 Ga0373931_0012248 Ga0373931_0012248_2419_3189 255
48 3300037471 Ga0395905_0000483 Ga0395905_0000483_27227_27997 255
49 3300044658 Ga0466972_0000788 Ga0466972_0000788_699_1469 255
50 3300044735 Ga0466968_0082189 Ga0466968_0082189_298_1068 255
51 3300046513 Ga0495616_0159330 Ga0495616_0159330_160_948 255
52 3300046557 Ga0495622_0022114 Ga0495622_0022114_1800_2570 255
53 3300046694 Ga0495649_0000133 Ga0495649_0000133_16388_17176 255
54 3300048919 Ga0496116_0075986 Ga0496116_0075986_70_840 255
55 3300048920 Ga0496117_0000010 Ga0496117_0000010_446701_447471 255
56 3300048921 Ga0496118_0000009 Ga0496118_0000009_164484_165254 255
57 3300048924 Ga0496121_0002120 Ga0496121_0002120_25550_26320 255
58 3300049572 Ga0501036_0099522 Ga0501036_0099522_154_927 255
59 3300049823 Ga0501044_0531419 Ga0501044_0531419_213_983 255
60 3300050489 nmdc:mga03683_15_c1 nmdc:mga03683_15_c1_99480_100250 255
61 3300050490 nmdc:mga03n38_128_c1 nmdc:mga03n38_128_c1_15206_15976 255
62 3300050493 nmdc:mga0k408_30_c1 nmdc:mga0k408_30_c1_5428_6198 255
63 3300050494 nmdc:mga06z11_9006_c1 nmdc:mga06z11_9006_c1_10_780 255
64 3300050496 nmdc:mga07m45_14_c1 nmdc:mga07m45_14_c1_66008_66778 255
65 3300050516 nmdc:mga0sz30_2523_c1 nmdc:mga0sz30_2523_c1_1936_2706 255
66 3300053125 Ga0500618_000774 Ga0500618_000774_5563_6351 255
67 3300053142 Ga0500577_0162468 Ga0500577_0162468_37_807 255
68 iso_pu_bacteria 2643221599 2644004031 255
69 iso_pu_bacteria 3005452660 3005458467 255
70 3300003203 JGI25406J46586_10008041 JGI25406J46586_100080413 256
71 3300003322 rootL2_10048027 rootL2_1004802711 256
72 3300003323 rootH1_10140496 rootH1_101404962 256
73 3300003792 Ga0055540_1016435 Ga0055540_10164352 256
74 3300003794 Ga0055531_10001660 Ga0055531_1000166014 256
75 3300005289 Ga0065704_10145825 Ga0065704_101458252 256
76 3300005366 Ga0070659_100001578 Ga0070659_1000015782 256
77 3300005439 Ga0070711_100142806 Ga0070711_1001428062 256
78 3300005456 Ga0070678_100049310 Ga0070678_1000493102 256
79 3300005459 Ga0068867_100000453 Ga0068867_10000045314 256
80 3300005539 Ga0068853_100110998 Ga0068853_1001109983 256
81 3300005546 Ga0070696_100019258 Ga0070696_1000192582 256
82 3300005564 Ga0070664_100172875 Ga0070664_1001728752 256
83 3300005616 Ga0068852_100059917 Ga0068852_1000599173 256
84 3300005983 Ga0081540_1008950 Ga0081540_10089507 256
85 3300005985 Ga0081539_10000654 Ga0081539_1000065446 256
86 3300006178 Ga0075367_10210118 Ga0075367_102101181 256
87 3300006195 Ga0075366_10016417 Ga0075366_100164173 256
88 3300006195 Ga0075366_10055732 Ga0075366_100557322 256
89 3300006353 Ga0075370_10024407 Ga0075370_100244072 256
90 3300006944 Ga0099823_1000804 Ga0099823_100080418 256
91 3300009093 Ga0105240_10024606 Ga0105240_100246063 256
92 3300009148 Ga0105243_10002357 Ga0105243_100023573 256
93 3300009148 Ga0105243_10318563 Ga0105243_103185632 256
94 3300009174 Ga0105241_10012640 Ga0105241_100126402 256
95 3300009176 Ga0105242_10002227 Ga0105242_100022275 256
96 3300009545 Ga0105237_10000870 Ga0105237_1000087012 256
97 3300009551 Ga0105238_10002779 Ga0105238_100027799 256
98 3300010375 Ga0105239_10003619 Ga0105239_1000361914 256
99 3300011119 Ga0105246_10000244 Ga0105246_1000024426 256
100 3300013100 Ga0157373_10074669 Ga0157373_100746691 256
101 3300013105 Ga0157369_10058200 Ga0157369_100582002 256
102 3300013307 Ga0157372_10017934 Ga0157372_100179342 256
103 3300014745 Ga0157377_10000088 Ga0157377_1000008854 256
104 3300015261 Ga0182006_1000366 Ga0182006_100036624 256
105 3300021388 Ga0213875_10002601 Ga0213875_1000260110 256
106 3300025256 Ga0209759_1000574 Ga0209759_10005747 256
107 3300025256 Ga0209759_1003483 Ga0209759_10034832 256
108 3300025273 Ga0209673_1004452 Ga0209673_10044527 256
109 3300025273 Ga0209673_1005299 Ga0209673_10052997 256
110 3300025298 Ga0209050_1004070 Ga0209050_10040702 256
111 3300025299 Ga0209256_1000424 Ga0209256_100042446 256
112 3300025299 Ga0209256_1002394 Ga0209256_100239414 256
113 3300025303 Ga0209051_1000469 Ga0209051_100046920 256
114 3300025303 Ga0209051_1001522 Ga0209051_10015222 256
115 3300025304 Ga0209257_1002583 Ga0209257_10025833 256
116 3300025728 Ga0207655_1001036 Ga0207655_100103625 256
117 3300025911 Ga0207654_10001203 Ga0207654_100012036 256
118 3300025914 Ga0207671_10005480 Ga0207671_100054806 256
119 3300025924 Ga0207694_10007525 Ga0207694_100075258 256
120 3300025932 Ga0207690_10010145 Ga0207690_100101455 256
121 3300025934 Ga0207686_10025577 Ga0207686_100255774 256
122 3300025935 Ga0207709_10005919 Ga0207709_100059193 256
123 3300025935 Ga0207709_10150628 Ga0207709_101506282 256
124 3300025945 Ga0207679_10247384 Ga0207679_102473842 256
125 3300026041 Ga0207639_10093891 Ga0207639_100938913 256
126 3300026089 Ga0207648_10000019 Ga0207648_1000001947 256
127 3300026121 Ga0207683_10067604 Ga0207683_100676042 256
128 3300026142 Ga0207698_10085477 Ga0207698_100854772 256
129 3300027296 Ga0209389_1000523 Ga0209389_10005235 256
130 3300027876 Ga0209974_10001360 Ga0209974_100013602 256
131 3300028666 Ga0265336_10000121 Ga0265336_1000012131 256
132 3300028794 Ga0307515_10003180 Ga0307515_1000318010 256
133 3300028794 Ga0307515_10034203 Ga0307515_100342034 256
134 3300029957 Ga0265324_10000630 Ga0265324_1000063019 256
135 3300030500 Ga0268256_1038204 Ga0268256_10382042 256
136 3300031239 Ga0265328_10011150 Ga0265328_100111502 256
137 3300031247 Ga0265340_10088385 Ga0265340_100883851 256
138 3300031250 Ga0265331_10001541 Ga0265331_100015417 256
139 3300031251 Ga0265327_10000012 Ga0265327_1000001221 256
140 3300031251 Ga0265327_10002226 Ga0265327_100022269 256
141 3300031344 Ga0265316_10064362 Ga0265316_100643624 256
142 3300031507 Ga0307509_10000904 Ga0307509_1000090450 256
143 3300031507 Ga0307509_10180698 Ga0307509_101806982 256
144 3300031548 Ga0307408_100010473 Ga0307408_1000104736 256
145 3300031616 Ga0307508_10048228 Ga0307508_100482283 256
146 3300031649 Ga0307514_10051350 Ga0307514_100513502 256
147 3300031730 Ga0307516_10001512 Ga0307516_1000151218 256
148 3300033179 Ga0307507_10036058 Ga0307507_100360583 256
149 3300033179 Ga0307507_10093547 Ga0307507_100935472 256
150 3300033180 Ga0307510_10002154 Ga0307510_1000215422 256
151 3300033180 Ga0307510_10177948 Ga0307510_101779482 256
152 3300033180 Ga0307510_10202177 Ga0307510_102021771 256
153 3300035170 Ga0373943_0059995 Ga0373943_0059995_1047_1823 256
154 3300035692 Ga0373935_0220655 Ga0373935_0220655_511_1287 256
155 3300035695 Ga0373927_0374705 Ga0373927_0374705_95_868 256
156 3300036401 Ga0373937_0185483 Ga0373937_0185483_141_917 256
157 3300037068 Ga0373925_0180134 Ga0373925_0180134_109_882 256
158 3300037471 Ga0395905_0027937 Ga0395905_0027937_1036_1809 256
159 3300037471 Ga0395905_0031358 Ga0395905_0031358_2643_3419 256
160 3300037471 Ga0395905_0039896 Ga0395905_0039896_2141_2914 256
161 3300037853 Ga0436364_0049513 Ga0436364_0049513_6727_7509 256
162 3300037853 Ga0436364_0123768 Ga0436364_0123768_281_1054 256
163 3300037853 Ga0436364_1447454 Ga0436364_1447454_8338_9111 256
164 3300038726 Ga0400490_55317 Ga0400490_55317_2027_2800 256
165 3300039437 Ga0436365_0451816 Ga0436365_0451816_141_914 256
166 3300039453 Ga0436362_0164873 Ga0436362_0164873_563_1336 256
167 3300041458 Ga0451798_0010289 Ga0451798_0010289_862_1635 256
168 3300042531 Ga0450918_003165 Ga0450918_003165_2194_2967 256
169 3300042876 Ga0451577_0039714 Ga0451577_0039714_756_1529 256
170 3300042876 Ga0451577_0071577 Ga0451577_0071577_2277_3053 256
171 3300044656 Ga0466969_0013878 Ga0466969_0013878_1734_2507 256
172 3300044673 Ga0453683_0011861 Ga0453683_0011861_1754_2527 256
173 3300044683 Ga0466965_0056235 Ga0466965_0056235_700_1473 256
174 3300044693 Ga0466961_0000561 Ga0466961_0000561_16475_17248 256
175 3300044706 Ga0466964_0000965 Ga0466964_0000965_7875_8648 256
176 3300044712 Ga0453684_0182122 Ga0453684_0182122_756_1529 256
177 3300044712 Ga0453684_0425721 Ga0453684_0425721_479_1252 256
178 3300044735 Ga0466968_0018589 Ga0466968_0018589_1268_2041 256
179 3300044842 Ga0466957_0014405 Ga0466957_0014405_3669_4442 256
180 3300044842 Ga0466957_0109275 Ga0466957_0109275_483_1256 256
181 3300045051 Ga0451576_0016260 Ga0451576_0016260_6917_7690 256
182 3300045836 Ga0466958_0001672 Ga0466958_0001672_5286_6059 256
183 3300045976 Ga0466967_0789082 Ga0466967_0789082_120_911 256
184 3300046453 Ga0495627_022302 Ga0495627_022302_178_951 256
185 3300046457 Ga0495590_0002119 Ga0495590_0002119_704_1597 256
186 3300046457 Ga0495590_0127462 Ga0495590_0127462_10_783 256
187 3300046471 Ga0495650_0007909 Ga0495650_0007909_763_1536 256
188 3300046471 Ga0495650_0026952 Ga0495650_0026952_1724_2497 256
189 3300046475 Ga0495639_0009955 Ga0495639_0009955_1096_1869 256
190 3300046491 Ga0495584_0066475 Ga0495584_0066475_117_890 256
191 3300046492 Ga0495585_0002217 Ga0495585_0002217_2970_3746 256
192 3300046492 Ga0495585_0038756 Ga0495585_0038756_304_1077 256
193 3300046500 Ga0495596_0001107 Ga0495596_0001107_1783_2556 256
194 3300046501 Ga0495607_0085112 Ga0495607_0085112_117_890 256
195 3300046506 Ga0495583_0070072 Ga0495583_0070072_337_1113 256
196 3300046507 Ga0495606_0004293 Ga0495606_0004293_13164_13937 256
197 3300046512 Ga0495610_0000505 Ga0495610_0000505_15858_16631 256
198 3300046524 Ga0495648_0206299 Ga0495648_0206299_150_923 256
199 3300046528 Ga0495642_0004309 Ga0495642_0004309_1393_2166 256
200 3300046530 Ga0495654_0000349 Ga0495654_0000349_23171_23944 256
201 3300046558 Ga0495633_0017087 Ga0495633_0017087_40_813 256
202 3300046616 Ga0495668_0005007 Ga0495668_0005007_3592_4365 256
203 3300046665 Ga0495661_0002383 Ga0495661_0002383_11847_12623 256
204 3300046665 Ga0495661_0016781 Ga0495661_0016781_1860_2633 256
205 3300047472 Ga0495686_0001970 Ga0495686_0001970_3337_4110 256
206 3300047472 Ga0495686_0261314 Ga0495686_0261314_17_790 256
207 3300048091 Ga0495626_0001974 Ga0495626_0001974_12223_12996 256
208 3300048907 Ga0496104_0014671 Ga0496104_0014671_1036_1812 256
209 3300048908 Ga0496105_0001304 Ga0496105_0001304_3080_3856 256
210 3300048914 Ga0496111_0121705 Ga0496111_0121705_629_1405 256
211 3300048917 Ga0496114_0004086 Ga0496114_0004086_4757_5533 256
212 3300048918 Ga0496115_0008806 Ga0496115_0008806_2857_3633 256
213 3300048919 Ga0496116_0041697 Ga0496116_0041697_374_1147 256
214 3300048924 Ga0496121_0003426 Ga0496121_0003426_8637_9413 256
215 3300048925 Ga0496122_0079497 Ga0496122_0079497_884_1657 256
216 3300048926 Ga0496123_0050659 Ga0496123_0050659_1737_2510 256
217 3300048928 Ga0496125_0024353 Ga0496125_0024353_1916_2692 256
218 3300048928 Ga0496125_0154136 Ga0496125_0154136_652_1425 256
219 3300048928 Ga0496125_0325147 Ga0496125_0325147_69_851 256
220 3300048929 Ga0496126_0003931 Ga0496126_0003931_13219_13992 256
221 3300049531 Ga0501315_000304 Ga0501315_000304_1612_2385 256
222 3300049572 Ga0501036_0476419 Ga0501036_0476419_137_910 256
223 3300049658 Ga0501211_001231 Ga0501211_001231_1852_2625 256
224 3300049669 Ga0501235_028579 Ga0501235_028579_458_1231 256
225 3300049671 Ga0501238_010973 Ga0501238_010973_186_959 256
226 3300049769 Ga0501272_003158 Ga0501272_003158_839_1612 256
227 3300050493 nmdc:mga0k408_8160_c1 nmdc:mga0k408_8160_c1_4067_4840 256
228 3300050496 nmdc:mga07m45_23960_c1 nmdc:mga07m45_23960_c1_695_1468 256
229 3300053080 Ga0500635_0000005 Ga0500635_0000005_136697_137470 256
230 3300053085 Ga0495619_0321792 Ga0495619_0321792_136_912 256
231 3300053086 Ga0500578_0000079 Ga0500578_0000079_43884_44657 256
232 3300053088 Ga0500644_0001698 Ga0500644_0001698_4625_5398 256
233 3300053093 Ga0500651_0092347 Ga0500651_0092347_377_1150 256
234 3300053098 Ga0500650_0064037 Ga0500650_0064037_820_1593 256
235 3300053134 Ga0500658_0025793 Ga0500658_0025793_1185_1994 256
236 3300053136 Ga0500559_0004165 Ga0500559_0004165_2712_3485 256
237 3300053139 Ga0500568_0008125 Ga0500568_0008125_1927_2700 256
238 3300053151 Ga0500604_0086669 Ga0500604_0086669_60_833 256
239 3300053154 Ga0500619_000059 Ga0500619_000059_10901_11674 256
240 3300053156 Ga0500622_0054035 Ga0500622_0054035_1198_1971 256
241 3300053157 Ga0500624_021749 Ga0500624_021749_237_1010 256
242 3300053739 Ga0500587_000474 Ga0500587_000474_139_948 256
243 3300053739 Ga0500587_005128 Ga0500587_005128_815_1588 256

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12804

NTP_transf_3

MobA-like NTP transferase domain

6

249

0.9

PF00483

NTP_transferase

Nucleotidyl transferase

5

226

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1tzf-assembly1.cif.gz_A x-ray crystal structure of alpha-d-glucose-1-phosphate cytidylyltransferase from salmonella typhi 0.9271 2 256
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.9192 2 256
1tzf-assembly1.cif.gz_A x-ray crystal structure of alpha-d-glucose-1-phosphate cytidylyltransferase from salmonella typhi 0.9129 2 256
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.9088 2 256
4y7t-assembly1.cif.gz_A structural analysis of muru 0.8447 1 248
ID Description Score Start End Superfamily
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9271 2 256 3.90.550.10
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9129 2 256 3.90.550.10
4y7vA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8391 1 246 3.90.550.10
af_A4I3X5_10_117_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8327 1 116 3.90.550.10
4y7vA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8317 1 246 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A382RYG7-F1-model_v4 Nucleotidyl transferase domain-containing protein 0.9847 1 135 GO:0009058
GO:0047343
AF-A0A257GWQ9-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9777 1 136 GO:0009058
GO:0047343
AF-A0A529I2Z1-F1-model_v4 deleted 0.9757 1 145
AF-A0A258KUJ6-F1-model_v4 Nucleotidyl transferase domain-containing protein 0.9754 1 145 GO:0009058
GO:0047343
AF-A0A533SLG1-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9717 1 135 GO:0009058
GO:0047343

Feature Viewer

pLDDT pTM Quality
89.37 0.86 High
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Predicted Structure (AlphaFold2)

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