F355659

General Info

Members Datasets Scaffolds Average Seq Length
243 187 486 640

Family's Representative Sequence

Representative Sequence 3300025919|Ga0207657_10063550|Ga0207657_100635502
Length 749
Sequence VRSRSGLTCACIISGTQASVLSGVKMPRNPGGATPTTVKGVALQGRETEGGISTQQSSASTAPSIWIRLTREGDTIEGYSRKTRTDPWQNFGRFVLNGLLSLMSAFHAGPSDPQLSHGDGGQDVHRRHRYASLVSLIGPGVLLAAFALALAIFAAMRGAGELHAPFVQRYFAWLPVGDLQLDAAFQLDQLSMVMVLIITGVGALIHLFSVGYMQDDPGYPRYFAYLNLFVFFMLVLVLGSSYPIVFIGWEGVGLCSYLLIGFWFSEKANADAGKKAFIVNRIGDFGFLIAMFLLFANVGRLDFVGVNAAAPSLQVGGVVVTAICLFFFLGCAGKSAQIPLYVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSNVLFAMAPVADLTVVLIGALTAILAASIGLKQWDIKKVLAYSTVSQLGYMFVGVGSGAYVAGMFHLMTHAFFKALLFLGSGSVIYAMHAAYHVTHNHEDAQDMRNMGGLKKYMPTTWLLMWAATLAIAGVPPFSGFFSKDEILGSLFLRAGHSTLADAHWLGIPGSVIMYLAYVLCVAAAFMTAVYMTRMMLYTFHGPNRSGDREREHLREAPWIMTGPLVVLGLFSVFGGWFNLPALLPLGPVGGLEHWLEPVVGQGALRVTGGAPIEASHGTEYTLIGAAVLVAYDAGVVEPVVGISRGLLWRGVDNGVIDRLTRLLFQSKDDDAAVGAVPMGGWASRAVGYLGSQLQSGRVGTYAWVLVVGVLFVLGAFSFR

Samples

Sample ID Description Type Environment
1 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
79 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
135 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
136 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
137 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
140 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
143 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
164 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
165 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
166 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
167 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
168 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
169 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
170 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
171 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
179 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
180 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
181 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
182 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
183 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
184 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
185 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
186 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
187 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.3
Metatranscriptomes 0
Isolates 3.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.47
Nodule 0
Rhizoplane 5.35
Rhizosphere 86.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207657_10063550 3300025919 Bacteria 3155
2 JGI24739J22299_10018223 3300001989 Bacteria 2526
3 JGI24737J22298_10000060 3300001990 Bacteria 32592
4 JGI24735J21928_10000032 3300002067 Bacteria 72360
5 JGI24751J29686_10005026 3300002459 Bacteria 2696
6 rootH1_10018888 3300003316 Bacteria 30592
7 rootH1_10012676 3300003323 Bacteria 3277
8 JGI25160J50197_1001583 3300003354 Bacteria 11221
9 Ga0055535_1003423 3300003761 Bacteria 4517
10 Ga0065712_10008567 3300005290 Bacteria 3905
11 Ga0065715_10092255 3300005293 Bacteria 5203
12 Ga0070658_10008549 3300005327 Bacteria 8230
13 Ga0070683_100042213 3300005329 Bacteria 4199
14 Ga0070683_100103484 3300005329 Bacteria 2683
15 Ga0070670_100046628 3300005331 Bacteria 3727
16 Ga0068869_100099380 3300005334 Bacteria 2199
17 Ga0070666_10038794 3300005335 Bacteria 3171
18 Ga0068868_100070121 3300005338 Bacteria 2794
19 Ga0070660_100071937 3300005339 Bacteria 2701
20 Ga0070689_100060905 3300005340 Bacteria 2935
21 Ga0070668_100018601 3300005347 Bacteria 5216
22 Ga0070669_100009309 3300005353 Bacteria 6993
23 Ga0070675_100001870 3300005354 Bacteria 15515
24 Ga0070675_100004759 3300005354 Bacteria 10361
25 Ga0070671_100007440 3300005355 Bacteria 8753
26 Ga0070671_100037302 3300005355 Bacteria 4030
27 Ga0070674_100000493 3300005356 Bacteria 19842
28 Ga0070673_100021888 3300005364 Bacteria 4645
29 Ga0070673_100051656 3300005364 Bacteria 3221
30 Ga0070688_100018584 3300005365 Bacteria 4013
31 Ga0070659_100000868 3300005366 Bacteria 22078
32 Ga0070667_100001113 3300005367 Bacteria 24519
33 Ga0070705_100000906 3300005440 Bacteria 16561
34 Ga0070694_100021451 3300005444 Bacteria 4128
35 Ga0070708_100067870 3300005445 Bacteria 3204
36 Ga0070678_100001265 3300005456 Bacteria 13416
37 Ga0070678_100044014 3300005456 Bacteria 3185
38 Ga0070662_100001259 3300005457 Bacteria 15571
39 Ga0070662_100009265 3300005457 Bacteria 6433
40 Ga0070681_10077854 3300005458 Bacteria 3273
41 Ga0068867_100003191 3300005459 Bacteria 11554
42 Ga0070699_100021845 3300005518 Bacteria 5516
43 Ga0070684_100017327 3300005535 Bacteria 5909
44 Ga0070684_100035465 3300005535 Bacteria 4269
45 Ga0070697_100007748 3300005536 Bacteria 8364
46 Ga0070686_100037246 3300005544 Bacteria 3016
47 Ga0070695_100012109 3300005545 Bacteria 5170
48 Ga0070696_100001799 3300005546 Bacteria 14064
49 Ga0070704_100053426 3300005549 Bacteria 2855
50 Ga0068855_100000049 3300005563 Bacteria 145321
51 Ga0070664_100001338 3300005564 Bacteria 19647
52 Ga0070664_100046540 3300005564 Bacteria 3663
53 Ga0068857_100105442 3300005577 Bacteria 2531
54 Ga0068854_100002496 3300005578 Bacteria 11405
55 Ga0068856_100003614 3300005614 Bacteria 15546
56 Ga0068856_100019013 3300005614 Bacteria 6665
57 Ga0068856_100063782 3300005614 Bacteria 3640
58 Ga0068852_100003149 3300005616 Bacteria 11504
59 Ga0068859_100010935 3300005617 Bacteria 9136
60 Ga0068859_100020486 3300005617 Bacteria 6637
61 Ga0068859_100045340 3300005617 Bacteria 4417
62 Ga0068864_100003845 3300005618 Bacteria 12371
63 Ga0068864_100006301 3300005618 Bacteria 9734
64 Ga0068866_10000778 3300005718 Bacteria 14329
65 Ga0068861_100001193 3300005719 Bacteria 16169
66 Ga0068870_10001350 3300005840 Bacteria 9905
67 Ga0068858_100114840 3300005842 Bacteria 2516
68 Ga0068860_100006756 3300005843 Bacteria 11507
69 Ga0068862_100089285 3300005844 Bacteria 2682
70 Ga0075366_10000556 3300006195 Bacteria 17427
71 Ga0097621_100025458 3300006237 Bacteria 4631
72 Ga0075433_10040219 3300006852 Bacteria 4046
73 Ga0097620_100010935 3300006931 Bacteria 9136
74 Ga0097620_100020486 3300006931 Bacteria 6637
75 Ga0097620_100045345 3300006931 Bacteria 4417
76 Ga0075435_100031144 3300007076 Bacteria 4200
77 Ga0105240_10000066 3300009093 Bacteria 212612
78 Ga0105240_10085778 3300009093 Bacteria 3857
79 Ga0105240_10104096 3300009093 Bacteria 3447
80 Ga0111539_10003295 3300009094 Bacteria 21340
81 Ga0114129_10101686 3300009147 Bacteria 3976
82 Ga0105243_10003291 3300009148 Bacteria 13126
83 Ga0105237_10017121 3300009545 Bacteria 7518
84 Ga0105237_10025383 3300009545 Bacteria 6061
85 Ga0105237_10026749 3300009545 Bacteria 5896
86 Ga0105249_10018674 3300009553 Bacteria 6175
87 Ga0105239_10000049 3300010375 Bacteria 177578
88 Ga0105239_10004192 3300010375 Bacteria 17318
89 Ga0105239_10063999 3300010375 Bacteria 4038
90 Ga0105239_10075994 3300010375 Bacteria 3694
91 Ga0105246_10004518 3300011119 Bacteria 8462
92 Ga0157373_10035803 3300013100 Bacteria 3563
93 Ga0157370_10030962 3300013104 Bacteria 5239
94 Ga0157378_10000421 3300013297 Bacteria 41701
95 Ga0157378_10002875 3300013297 Bacteria 15339
96 Ga0157378_10071144 3300013297 Bacteria 3123
97 Ga0163162_10021372 3300013306 Bacteria 6372
98 Ga0157372_10002381 3300013307 Bacteria 20343
99 Ga0157372_10041830 3300013307 Bacteria 5067
100 Ga0157372_10125330 3300013307 Bacteria 2953
101 Ga0157372_10228865 3300013307 Bacteria 2155
102 Ga0157375_10046481 3300013308 Bacteria 4233
103 Ga0157375_10051989 3300013308 Bacteria 4026
104 Ga0157380_10002201 3300014326 Bacteria 13101
105 Ga0157377_10000354 3300014745 Bacteria 20420
106 Ga0182005_1000116 3300015265 Bacteria 57638
107 Ga0209026_1001423 3300025250 Bacteria 10617
108 Ga0209455_1003330 3300025272 Bacteria 5745
109 Ga0207682_10007889 3300025893 Bacteria 4227
110 Ga0207647_10000061 3300025904 Bacteria 83985
111 Ga0207645_10005465 3300025907 Bacteria 9198
112 Ga0207643_10008405 3300025908 Bacteria 5538
113 Ga0207643_10015028 3300025908 Bacteria 4211
114 Ga0207705_10018072 3300025909 Bacteria 5042
115 Ga0207654_10002457 3300025911 Bacteria 9435
116 Ga0207695_10000078 3300025913 Bacteria 297378
117 Ga0207695_10057787 3300025913 Bacteria 4029
118 Ga0207671_10006548 3300025914 Bacteria 10350
119 Ga0207671_10021013 3300025914 Bacteria 4960
120 Ga0207657_10067225 3300025919 Bacteria 3048
121 Ga0207649_10026961 3300025920 Bacteria 3367
122 Ga0207659_10037462 3300025926 Bacteria 3368
123 Ga0207644_10024215 3300025931 Bacteria 4165
124 Ga0207644_10042309 3300025931 Bacteria 3228
125 Ga0207706_10000233 3300025933 Bacteria 60777
126 Ga0207686_10000067 3300025934 Bacteria 94339
127 Ga0207709_10015380 3300025935 Bacteria 4242
128 Ga0207670_10015446 3300025936 Bacteria 4563
129 Ga0207669_10001925 3300025937 Bacteria 8800
130 Ga0207704_10006365 3300025938 Bacteria 5503
131 Ga0207691_10003241 3300025940 Bacteria 15858
132 Ga0207711_10037338 3300025941 Bacteria 4125
133 Ga0207679_10031098 3300025945 Bacteria 3734
134 Ga0207667_10000015 3300025949 Bacteria 417534
135 Ga0207667_10036483 3300025949 Bacteria 5269
136 Ga0207712_10000422 3300025961 Bacteria 36283
137 Ga0207712_10022643 3300025961 Bacteria 4140
138 Ga0207668_10021280 3300025972 Bacteria 4134
139 Ga0207658_10007703 3300025986 Bacteria 7334
140 Ga0207703_10019784 3300026035 Bacteria 5262
141 Ga0207639_10014160 3300026041 Bacteria 5600
142 Ga0207702_10000163 3300026078 Bacteria 79263
143 Ga0207648_10000030 3300026089 Bacteria 129654
144 Ga0207676_10004008 3300026095 Bacteria 10398
145 Ga0207674_10019328 3300026116 Bacteria 7380
146 Ga0207674_10030258 3300026116 Bacteria 5694
147 Ga0207675_100000346 3300026118 Bacteria 44265
148 Ga0207683_10002858 3300026121 Bacteria 15062
149 Ga0207683_10029401 3300026121 Bacteria 4757
150 Ga0268264_10007161 3300028381 Bacteria 9346
151 Ga0268264_10009432 3300028381 Bacteria 8083
152 Ga0307517_10000305 3300028786 Bacteria 84961
153 Ga0307515_10082575 3300028794 Bacteria 4153
154 Ga0307509_10120779 3300031507 Bacteria 2598
155 Ga0307508_10002437 3300031616 Bacteria 19616
156 Ga0307516_10002112 3300031730 Bacteria 26973
157 Ga0307405_10025834 3300031731 Bacteria 3377
158 Ga0307410_10012215 3300031852 Bacteria 4954
159 Ga0307409_100019179 3300031995 Bacteria 4623
160 Ga0307409_100105018 3300031995 Bacteria 2354
161 Ga0307416_100019239 3300032002 Bacteria 4836
162 Ga0307415_100009743 3300032126 Bacteria 5406
163 Ga0395899_0000027 3300037312 Bacteria 337387
164 Ga0395900_0001518 3300037418 Bacteria 27559
165 Ga0395900_0006443 3300037418 Bacteria 12236
166 Ga0395898_0056141 3300037466 Bacteria 3840
167 Ga0395905_0000327 3300037471 Bacteria 68334
168 Ga0395901_0013239 3300038443 Bacteria 8376
169 Ga0400489_36972 3300039093 Bacteria 7486
170 Ga0451577_0000047 3300042876 Bacteria 312768
171 Ga0451577_0001586 3300042876 Bacteria 29663
172 Ga0451577_0004271 3300042876 Bacteria 15192
173 Ga0451577_0016579 3300042876 Bacteria 6818
174 Ga0451577_0041679 3300042876 Bacteria 4121
175 Ga0453684_0000374 3300044712 Bacteria 183743
176 Ga0453684_0000382 3300044712 Bacteria 181519
177 Ga0453684_0004316 3300044712 Bacteria 30291
178 Ga0453684_0182835 3300044712 Bacteria 2460
179 Ga0466959_0034957 3300045049 Bacteria 3717
180 Ga0451576_0001603 3300045051 Bacteria 38023
181 Ga0451576_0015064 3300045051 Bacteria 8586
182 Ga0451576_0029220 3300045051 Bacteria 5899
183 Ga0495651_0034231 3300046462 Bacteria 3960
184 Ga0495639_0003886 3300046475 Bacteria 6419
185 Ga0495664_0030687 3300046477 Bacteria 3149
186 Ga0495594_0017112 3300046499 Bacteria 3826
187 Ga0495606_0018663 3300046507 Bacteria 5192
188 Ga0495618_0033283 3300046514 Bacteria 3231
189 Ga0495666_0000412 3300046526 Bacteria 18941
190 Ga0495652_0027847 3300046529 Bacteria 4977
191 Ga0495665_0031247 3300046531 Bacteria 2850
192 Ga0495586_0002073 3300046535 Bacteria 10892
193 Ga0495661_0035912 3300046665 Bacteria 3107
194 Ga0495658_0002871 3300046683 Bacteria 8656
195 Ga0495613_0004856 3300046689 Bacteria 10092
196 Ga0495674_0010409 3300047319 Bacteria 8804
197 Ga0495680_0010113 3300047322 Bacteria 8435
198 Ga0495686_0000679 3300047472 Bacteria 46024
199 Ga0495686_0005442 3300047472 Bacteria 10043
200 Ga0496100_0061287 3300048903 Bacteria 2479
201 Ga0496102_0009462 3300048905 Bacteria 8375
202 Ga0496102_0042418 3300048905 Bacteria 4122
203 Ga0496102_0109945 3300048905 Bacteria 2569
204 Ga0496108_0001015 3300048911 Bacteria 21893
205 Ga0496108_0025466 3300048911 Bacteria 4876
206 Ga0496109_0009087 3300048912 Bacteria 8461
207 Ga0496110_0048749 3300048913 Bacteria 3713
208 Ga0496112_0000777 3300048915 Bacteria 22477
209 Ga0496112_0001653 3300048915 Bacteria 17323
210 Ga0496112_0016641 3300048915 Bacteria 6895
211 Ga0496113_0000735 3300048916 Bacteria 16815
212 Ga0496114_0082284 3300048917 Bacteria 2721
213 Ga0496121_0000010 3300048924 Bacteria 793488
214 Ga0501038_0095643 3300049574 Bacteria 2481
215 Ga0501070_0051521 3300049586 Bacteria 3417
216 Ga0501073_0019417 3300049589 Bacteria 4908
217 Ga0501075_0028411 3300049591 Bacteria 4129
218 Ga0501198_000292 3300049649 Bacteria 6336
219 Ga0501207_002131 3300049654 Bacteria 2533
220 Ga0501217_000040 3300049661 Bacteria 14443
221 Ga0501222_002281 3300049662 Bacteria 2666
222 Ga0501223_000488 3300049663 Bacteria 9591
223 Ga0501223_004697 3300049663 Bacteria 2904
224 Ga0501233_003504 3300049668 Bacteria 2823
225 Ga0501261_001054 3300049690 Bacteria 3380
226 Ga0501245_000446 3300049708 Bacteria 5000
227 Ga0501079_0065773 3300049741 Bacteria 2797
228 Ga0501080_0037842 3300049742 Bacteria 4505
229 Ga0501268_001968 3300049765 Bacteria 2639
230 nmdc:mga0k408_1014_c1 3300050493 Bacteria 15426
231 nmdc:mga08y16_14838_c1 3300050511 Bacteria 8193
232 nmdc:mga0n895_18223_c1 3300050512 Bacteria 6492
233 nmdc:mga0a205_49334_c1 3300050515 Bacteria 4063
234 Ga0500635_0004790 3300053080 Bacteria 3505
235 2819571938 2818991442 Bacteria 8318214
236 2821141818 2821136567 Bacteria 8080116
237 2852627060 2852623160 Bacteria 4376875
238 2884935206 2884933994 Bacteria 4535041
239 2890738866 2890737413 Bacteria 4269751
240 2898714488 2898713307 Bacteria 4110805
241 2904469767 2904467357 Bacteria 8057758
242 2977234007 2977232053 Bacteria 5485925
243 8055592077 8055588893 Bacteria 3619545
244 Ga0207657_10063550
245 JGI24739J22299_10018223
246 JGI24737J22298_10000060
247 JGI24735J21928_10000032
248 JGI24751J29686_10005026
249 rootH1_10018888
250 rootH1_10012676
251 JGI25160J50197_1001583
252 Ga0055535_1003423
253 Ga0065712_10008567
254 Ga0065715_10092255
255 Ga0070658_10008549
256 Ga0070683_100042213
257 Ga0070683_100103484
258 Ga0070670_100046628
259 Ga0068869_100099380
260 Ga0070666_10038794
261 Ga0068868_100070121
262 Ga0070660_100071937
263 Ga0070689_100060905
264 Ga0070668_100018601
265 Ga0070669_100009309
266 Ga0070675_100001870
267 Ga0070675_100004759
268 Ga0070671_100007440
269 Ga0070671_100037302
270 Ga0070674_100000493
271 Ga0070673_100021888
272 Ga0070673_100051656
273 Ga0070688_100018584
274 Ga0070659_100000868
275 Ga0070667_100001113
276 Ga0070705_100000906
277 Ga0070694_100021451
278 Ga0070708_100067870
279 Ga0070678_100001265
280 Ga0070678_100044014
281 Ga0070662_100001259
282 Ga0070662_100009265
283 Ga0070681_10077854
284 Ga0068867_100003191
285 Ga0070699_100021845
286 Ga0070684_100017327
287 Ga0070684_100035465
288 Ga0070697_100007748
289 Ga0070686_100037246
290 Ga0070695_100012109
291 Ga0070696_100001799
292 Ga0070704_100053426
293 Ga0068855_100000049
294 Ga0070664_100001338
295 Ga0070664_100046540
296 Ga0068857_100105442
297 Ga0068854_100002496
298 Ga0068856_100003614
299 Ga0068856_100019013
300 Ga0068856_100063782
301 Ga0068852_100003149
302 Ga0068859_100010935
303 Ga0068859_100020486
304 Ga0068859_100045340
305 Ga0068864_100003845
306 Ga0068864_100006301
307 Ga0068866_10000778
308 Ga0068861_100001193
309 Ga0068870_10001350
310 Ga0068858_100114840
311 Ga0068860_100006756
312 Ga0068862_100089285
313 Ga0075366_10000556
314 Ga0097621_100025458
315 Ga0075433_10040219
316 Ga0097620_100010935
317 Ga0097620_100020486
318 Ga0097620_100045345
319 Ga0075435_100031144
320 Ga0105240_10000066
321 Ga0105240_10085778
322 Ga0105240_10104096
323 Ga0111539_10003295
324 Ga0114129_10101686
325 Ga0105243_10003291
326 Ga0105237_10017121
327 Ga0105237_10025383
328 Ga0105237_10026749
329 Ga0105249_10018674
330 Ga0105239_10000049
331 Ga0105239_10004192
332 Ga0105239_10063999
333 Ga0105239_10075994
334 Ga0105246_10004518
335 Ga0157373_10035803
336 Ga0157370_10030962
337 Ga0157378_10000421
338 Ga0157378_10002875
339 Ga0157378_10071144
340 Ga0163162_10021372
341 Ga0157372_10002381
342 Ga0157372_10041830
343 Ga0157372_10125330
344 Ga0157372_10228865
345 Ga0157375_10046481
346 Ga0157375_10051989
347 Ga0157380_10002201
348 Ga0157377_10000354
349 Ga0182005_1000116
350 Ga0209026_1001423
351 Ga0209455_1003330
352 Ga0207682_10007889
353 Ga0207647_10000061
354 Ga0207645_10005465
355 Ga0207643_10008405
356 Ga0207643_10015028
357 Ga0207705_10018072
358 Ga0207654_10002457
359 Ga0207695_10000078
360 Ga0207695_10057787
361 Ga0207671_10006548
362 Ga0207671_10021013
363 Ga0207657_10067225
364 Ga0207649_10026961
365 Ga0207659_10037462
366 Ga0207644_10024215
367 Ga0207644_10042309
368 Ga0207706_10000233
369 Ga0207686_10000067
370 Ga0207709_10015380
371 Ga0207670_10015446
372 Ga0207669_10001925
373 Ga0207704_10006365
374 Ga0207691_10003241
375 Ga0207711_10037338
376 Ga0207679_10031098
377 Ga0207667_10000015
378 Ga0207667_10036483
379 Ga0207712_10000422
380 Ga0207712_10022643
381 Ga0207668_10021280
382 Ga0207658_10007703
383 Ga0207703_10019784
384 Ga0207639_10014160
385 Ga0207702_10000163
386 Ga0207648_10000030
387 Ga0207676_10004008
388 Ga0207674_10019328
389 Ga0207674_10030258
390 Ga0207675_100000346
391 Ga0207683_10002858
392 Ga0207683_10029401
393 Ga0268264_10007161
394 Ga0268264_10009432
395 Ga0307517_10000305
396 Ga0307515_10082575
397 Ga0307509_10120779
398 Ga0307508_10002437
399 Ga0307516_10002112
400 Ga0307405_10025834
401 Ga0307410_10012215
402 Ga0307409_100019179
403 Ga0307409_100105018
404 Ga0307416_100019239
405 Ga0307415_100009743
406 Ga0395899_0000027
407 Ga0395900_0001518
408 Ga0395900_0006443
409 Ga0395898_0056141
410 Ga0395905_0000327
411 Ga0395901_0013239
412 Ga0400489_36972
413 Ga0451577_0000047
414 Ga0451577_0001586
415 Ga0451577_0004271
416 Ga0451577_0016579
417 Ga0451577_0041679
418 Ga0453684_0000374
419 Ga0453684_0000382
420 Ga0453684_0004316
421 Ga0453684_0182835
422 Ga0466959_0034957
423 Ga0451576_0001603
424 Ga0451576_0015064
425 Ga0451576_0029220
426 Ga0495651_0034231
427 Ga0495639_0003886
428 Ga0495664_0030687
429 Ga0495594_0017112
430 Ga0495606_0018663
431 Ga0495618_0033283
432 Ga0495666_0000412
433 Ga0495652_0027847
434 Ga0495665_0031247
435 Ga0495586_0002073
436 Ga0495661_0035912
437 Ga0495658_0002871
438 Ga0495613_0004856
439 Ga0495674_0010409
440 Ga0495680_0010113
441 Ga0495686_0000679
442 Ga0495686_0005442
443 Ga0496100_0061287
444 Ga0496102_0009462
445 Ga0496102_0042418
446 Ga0496102_0109945
447 Ga0496108_0001015
448 Ga0496108_0025466
449 Ga0496109_0009087
450 Ga0496110_0048749
451 Ga0496112_0000777
452 Ga0496112_0001653
453 Ga0496112_0016641
454 Ga0496113_0000735
455 Ga0496114_0082284
456 Ga0496121_0000010
457 Ga0501038_0095643
458 Ga0501070_0051521
459 Ga0501073_0019417
460 Ga0501075_0028411
461 Ga0501198_000292
462 Ga0501207_002131
463 Ga0501217_000040
464 Ga0501222_002281
465 Ga0501223_000488
466 Ga0501223_004697
467 Ga0501233_003504
468 Ga0501261_001054
469 Ga0501245_000446
470 Ga0501079_0065773
471 Ga0501080_0037842
472 Ga0501268_001968
473 nmdc:mga0k408_1014_c1
474 nmdc:mga08y16_14838_c1
475 nmdc:mga0n895_18223_c1
476 nmdc:mga0a205_49334_c1
477 Ga0500635_0004790
478 2819571938
479 2821141818
480 2852627060
481 2884935206
482 2890738866
483 2898714488
484 2904469767
485 2977234007
486 8055592077

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00662

Proton_antipo_N

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus

173

223

1

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

240

532

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8e73-assembly1.cif.gz_4M vigna radiata supercomplex i+iii2 (full bridge) 0.8876 5 503
8beh-assembly1.cif.gz_L cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane tip) 0.8843 6 573
8e73-assembly1.cif.gz_4M vigna radiata supercomplex i+iii2 (full bridge) 0.8824 5 503
7ard-assembly1.cif.gz_L cryo-em structure of polytomella complex-i (complete composition) 0.8815 5 578
7ar7-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (open conformation) 0.8806 5 503
ID Description Score Start End Superfamily
af_Q2G0W2_1_118_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7751 1 126 1.20.1070.10
af_Q2G212_1_126_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7573 2 149 1.20.1070.10
af_Q2G0W2_1_118_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7218 1 126 1.20.1070.10
af_Q2G212_1_126_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7186 2 149 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7091 1 118 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A378CQW0-F1-model_v4 deleted 0.9774 276 442
AF-A0A2V9ZLF6-F1-model_v4 NADH-quinone oxidoreductase subunit L 0.9763 79 199 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
AF-A0A378CR53-F1-model_v4 deleted 0.9762 3 204
AF-A0A432TG26-F1-model_v4 NADH-quinone oxidoreductase subunit L 0.9736 1 203 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
AF-A0A1C8YZQ1-F1-model_v4 NADH:ubiquinone reductase (H(+)-translocating) (EC 7.1.1.2) (NADH dehydrogenase subunit 5) 0.9729 263 394 GO:0003954
GO:0005739
GO:0008137
GO:0015990
GO:0016020
GO:0042773

Map