F355508

General Info

Members Datasets Scaffolds Average Seq Length
243 162 243 232

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100186788|Ga0075436_1001867882
Length 221
Sequence VISVLPVEGLPEVHPGDEIADLVVDRIELQDGDVVVVTQKIVSKAEGRLEKVADEAERLRLIERESVRVLRRRDELVISETPHGFVCANAGVDLSNVDEGIAALLPVDADRSARHIRDALVARTGLTVAVIVSDTFGRPWRRGLVDVALGCAGVAAIVDLRGTADTRGRTLQATEVAVADLVMGKDRDVPVAVVRGVDRSWLRESSVRTEVVRPHGEDLFR

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
66 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
74 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
77 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
78 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.94
Nodule 0
Rhizoplane 6.17
Rhizosphere 83.95
Stem 0
Stem Tuber 0
Unclassified 4.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100056175 3300005338 Bacteria 3108
2 Ga0070661_100050959 3300005344 Bacteria 3029
3 Ga0070675_100446816 3300005354 Bacteria 1159
4 Ga0070671_100000828 3300005355 Bacteria 22448
5 Ga0070700_100373426 3300005441 Bacteria 1064
6 Ga0070708_100001784 3300005445 Bacteria 16510
7 Ga0070678_100792518 3300005456 Bacteria 860
8 Ga0070662_100646171 3300005457 Bacteria 892
9 Ga0070681_10162919 3300005458 Bacteria 2154
10 Ga0070706_100150874 3300005467 Bacteria 2170
11 Ga0070706_100348449 3300005467 Bacteria 1380
12 Ga0070698_100002794 3300005471 Bacteria 19229
13 Ga0070698_100180479 3300005471 Bacteria 2050
14 Ga0070684_100409277 3300005535 Bacteria 1251
15 Ga0070697_100127431 3300005536 Bacteria 2133
16 Ga0068863_100427410 3300005841 Bacteria 1298
17 Ga0068858_100379786 3300005842 Bacteria 1356
18 Ga0068860_100506059 3300005843 Bacteria 1206
19 Ga0081455_10091466 3300005937 Bacteria 2464
20 Ga0081539_10052796 3300005985 Bacteria 2280
21 Ga0075365_10006113 3300006038 Bacteria 6584
22 Ga0075365_10042547 3300006038 Bacteria 2970
23 Ga0075363_100025763 3300006048 Bacteria 3003
24 Ga0075364_10280314 3300006051 Bacteria 1134
25 Ga0070716_100160055 3300006173 Bacteria 1458
26 Ga0075367_10130891 3300006178 Bacteria 1551
27 Ga0075428_100118879 3300006844 Bacteria 2878
28 Ga0075430_100095767 3300006846 Bacteria 2481
29 Ga0075430_100101277 3300006846 Bacteria 2405
30 Ga0075430_100568552 3300006846 Bacteria 935
31 Ga0075431_100014754 3300006847 Bacteria 7911
32 Ga0075431_100036719 3300006847 Bacteria 5047
33 Ga0075431_100162220 3300006847 Bacteria 2298
34 Ga0075431_100240985 3300006847 Bacteria 1840
35 Ga0075433_10001177 3300006852 Bacteria 19008
36 Ga0075434_100001761 3300006871 Bacteria 18617
37 Ga0075429_100001169 3300006880 Bacteria 21188
38 Ga0075429_100680068 3300006880 Bacteria 902
39 Ga0075436_100186788 3300006914 Bacteria 1466
40 Ga0075435_100026887 3300007076 Bacteria 4494
41 Ga0075435_100234297 3300007076 Bacteria 1560
42 Ga0105245_10009809 3300009098 Bacteria 8343
43 Ga0114129_10068624 3300009147 Bacteria 4943
44 Ga0114129_10137889 3300009147 Bacteria 3346
45 Ga0105242_10158479 3300009176 Bacteria 1979
46 Ga0105242_10417694 3300009176 Bacteria 1256
47 Ga0105248_10816890 3300009177 Bacteria 1052
48 Ga0105239_10551975 3300010375 Bacteria 1312
49 Ga0157374_11176714 3300013296 Bacteria 788
50 Ga0157378_10147948 3300013297 Bacteria 2186
51 Ga0163163_10051085 3300014325 Bacteria 4075
52 Ga0163163_10116817 3300014325 Bacteria 2699
53 Ga0213876_10020152 3300021384 Bacteria 3524
54 Ga0213876_10045597 3300021384 Bacteria 2318
55 Ga0207710_10145226 3300025900 Bacteria 1148
56 Ga0207688_10195812 3300025901 Bacteria 1210
57 Ga0207684_10034610 3300025910 Bacteria 4292
58 Ga0207646_10189019 3300025922 Bacteria 1860
59 Ga0207659_10651977 3300025926 Bacteria 900
60 Ga0207687_10010563 3300025927 Bacteria 6035
61 Ga0207687_10010669 3300025927 Bacteria 6001
62 Ga0207644_10007251 3300025931 Bacteria 7217
63 Ga0207686_10300728 3300025934 Bacteria 1191
64 Ga0207665_10072159 3300025939 Bacteria 2358
65 Ga0207711_10345158 3300025941 Bacteria 1378
66 Ga0207677_10151158 3300026023 Bacteria 1792
67 Ga0207703_10397048 3300026035 Bacteria 1279
68 Ga0207708_10311923 3300026075 Bacteria 1282
69 Ga0207702_10168160 3300026078 Bacteria 2008
70 Ga0268266_10286608 3300028379 Bacteria 1533
71 Ga0268265_10463765 3300028380 Bacteria 1186
72 Ga0268264_10310663 3300028381 Bacteria 1487
73 Ga0265338_10192211 3300028800 Bacteria 1546
74 Ga0265327_10055064 3300031251 Bacteria 2056
75 Ga0265327_10072950 3300031251 Bacteria 1713
76 Ga0307407_10036370 3300031903 Bacteria 2713
77 Ga0307409_100004925 3300031995 Bacteria 7602
78 Ga0307409_100820882 3300031995 Bacteria 939
79 Ga0307416_100231799 3300032002 Bacteria 1781
80 Ga0307411_10013302 3300032005 Bacteria 4535
81 Ga0307415_100209612 3300032126 Bacteria 1553
82 Ga0373926_0147267 3300035083 Bacteria 896
83 Ga0373953_0194295 3300035117 Unclassified 877
84 Ga0373935_0180289 3300035692 Bacteria 1450
85 Ga0373933_0080914 3300035724 Bacteria 1992
86 Ga0316584_0230417 3300036712 Bacteria 1358
87 Ga0436364_1402491 3300037853 Bacteria 1443
88 Ga0400483_034255 3300039062 Bacteria 1526
89 Ga0400483_038664 3300039062 Bacteria 7341
90 Ga0400483_139200 3300039062 Bacteria 6830
91 Ga0436365_0066661 3300039437 Bacteria 1324
92 Ga0436365_0266568 3300039437 Bacteria 10230
93 Ga0436365_1113958 3300039437 Bacteria 3794
94 Ga0436360_1364716 3300039438 Bacteria 3650
95 Ga0436361_0062143 3300039447 Bacteria 3912
96 Ga0436362_1004883 3300039453 Bacteria 2876
97 Ga0436362_1263326 3300039453 Bacteria 722
98 Ga0451837_0309349 3300041494 Bacteria 3187
99 Ga0451843_0868853 3300041509 Bacteria 1065
100 Ga0451853_1054454 3300041512 Bacteria 1006
101 Ga0466966_0074402 3300044684 Unclassified 2123
102 Ga0495592_0112871 3300046454 Unclassified 1921
103 Ga0495629_0028053 3300046459 Bacteria 3998
104 Ga0495629_0245243 3300046459 Bacteria 1233
105 Ga0495651_0038636 3300046462 Bacteria 3717
106 Ga0495653_0076781 3300046463 Bacteria 2482
107 Ga0495653_0123735 3300046463 Bacteria 1839
108 Ga0495653_0178982 3300046463 Unclassified 1457
109 Ga0495664_0208735 3300046477 Bacteria 1183
110 Ga0495594_0242132 3300046499 Bacteria 1028
111 Ga0495583_0213987 3300046506 Bacteria 780
112 Ga0495608_0045805 3300046511 Bacteria 2913
113 Ga0495608_0051177 3300046511 Bacteria 2738
114 Ga0495608_0082394 3300046511 Bacteria 2089
115 Ga0495608_0322723 3300046511 Bacteria 954
116 Ga0495618_0041658 3300046514 Bacteria 2893
117 Ga0495628_0016476 3300046516 Bacteria 6164
118 Ga0495628_0101892 3300046516 Bacteria 2215
119 Ga0495630_0024941 3300046517 Bacteria 4420
120 Ga0495630_0047505 3300046517 Bacteria 3211
121 Ga0495630_0104963 3300046517 Bacteria 2139
122 Ga0495630_0110152 3300046517 Unclassified 2086
123 Ga0495630_0136445 3300046517 Bacteria 1864
124 Ga0495630_0194536 3300046517 Bacteria 1547
125 Ga0495630_0341532 3300046517 Bacteria 1146
126 Ga0495666_0080341 3300046526 Bacteria 1543
127 Ga0495666_0108789 3300046526 Bacteria 1303
128 Ga0495652_0227892 3300046529 Bacteria 1396
129 Ga0495640_0046720 3300046533 Bacteria 2998
130 Ga0495640_0439766 3300046533 Bacteria 797
131 Ga0495586_0111699 3300046535 Bacteria 1521
132 Ga0495667_0019801 3300046559 Bacteria 4541
133 Ga0495667_0040026 3300046559 Bacteria 3114
134 Ga0495667_0042874 3300046559 Bacteria 2999
135 Ga0495667_0045046 3300046559 Bacteria 2922
136 Ga0495634_0095473 3300046642 Bacteria 1926
137 Ga0495634_0163337 3300046642 Unclassified 1403
138 Ga0495634_0222846 3300046642 Bacteria 1163
139 Ga0495657_0040620 3300046675 Bacteria 3189
140 Ga0495599_0151877 3300046678 Unclassified 1434
141 Ga0495623_0032405 3300046679 Bacteria 3359
142 Ga0495646_0147668 3300046680 Bacteria 1310
143 Ga0495658_0151240 3300046683 Bacteria 1426
144 Ga0495613_0006196 3300046689 Bacteria 8949
145 Ga0495613_0122914 3300046689 Bacteria 1863
146 Ga0495613_0150195 3300046689 Unclassified 1662
147 Ga0495613_0156486 3300046689 Bacteria 1623
148 Ga0495613_0415016 3300046689 Bacteria 917
149 Ga0495589_0237514 3300046794 Bacteria 853
150 Ga0495581_0200973 3300047315 Bacteria 1166
151 Ga0495604_0037451 3300047317 Bacteria 3820
152 Ga0495604_0263682 3300047317 Unclassified 1170
153 Ga0495674_0103093 3300047319 Bacteria 2426
154 Ga0495674_0611758 3300047319 Bacteria 862
155 Ga0495672_0001621 3300047320 Bacteria 21927
156 Ga0495676_0053851 3300047321 Bacteria 3203
157 Ga0495680_0099550 3300047322 Bacteria 2167
158 Ga0495680_0190108 3300047322 Bacteria 1477
159 Ga0495680_0323262 3300047322 Unclassified 1079
160 Ga0495680_0416456 3300047322 Bacteria 925
161 Ga0495675_0017635 3300047444 Bacteria 4527
162 Ga0495675_0168248 3300047444 Bacteria 1347
163 Ga0495684_0026020 3300047471 Bacteria 4497
164 Ga0495614_0018084 3300048089 Bacteria 3054
165 Ga0495614_0076095 3300048089 Bacteria 1451
166 Ga0496100_0084766 3300048903 Bacteria 2149
167 Ga0496102_0557876 3300048905 Bacteria 1068
168 Ga0496104_0042240 3300048907 Bacteria 4278
169 Ga0496105_0397992 3300048908 Bacteria 1094
170 Ga0496106_0335709 3300048909 Bacteria 1214
171 Ga0496107_0272086 3300048910 Bacteria 1261
172 Ga0496108_0043403 3300048911 Bacteria 3756
173 Ga0496109_0039077 3300048912 Bacteria 4294
174 Ga0496109_0069358 3300048912 Bacteria 3233
175 Ga0496109_0524737 3300048912 Bacteria 1118
176 Ga0496109_0624512 3300048912 Bacteria 1014
177 Ga0496110_0007325 3300048913 Bacteria 8804
178 Ga0496112_0050051 3300048915 Bacteria 4096
179 Ga0496114_0375815 3300048917 Bacteria 1258
180 Ga0496115_0043775 3300048918 Bacteria 3570
181 Ga0501031_0044749 3300049568 Bacteria 2889
182 Ga0501033_0061050 3300049570 Bacteria 2779
183 Ga0501034_0000121 3300049571 Bacteria 144340
184 Ga0501034_0012109 3300049571 Bacteria 8919
185 Ga0501034_0014843 3300049571 Bacteria 8015
186 Ga0501034_0048704 3300049571 Bacteria 4277
187 Ga0501034_0088660 3300049571 Bacteria 3091
188 Ga0501036_0030476 3300049572 Bacteria 4556
189 Ga0501037_0046402 3300049573 Bacteria 3186
190 Ga0501038_0112193 3300049574 Bacteria 2257
191 Ga0501040_0069021 3300049576 Bacteria 2438
192 Ga0501043_0063770 3300049579 Bacteria 2893
193 Ga0501046_0014607 3300049580 Bacteria 6617
194 Ga0501047_0065822 3300049581 Bacteria 3493
195 Ga0501047_0117301 3300049581 Bacteria 2543
196 Ga0501048_0100263 3300049582 Bacteria 2043
197 Ga0501067_0072693 3300049583 Bacteria 1905
198 Ga0501068_0000921 3300049584 Bacteria 15413
199 Ga0501069_0000005 3300049585 Bacteria 189293
200 Ga0501070_0000012 3300049586 Bacteria 188541
201 Ga0501070_0018438 3300049586 Bacteria 5855
202 Ga0501070_0034298 3300049586 Bacteria 4244
203 Ga0501071_0069404 3300049587 Bacteria 2566
204 Ga0501072_0006465 3300049588 Bacteria 8922
205 Ga0501074_0096326 3300049590 Bacteria 2119
206 Ga0501074_0124926 3300049590 Bacteria 1840
207 Ga0501076_0931513 3300049592 Bacteria 716
208 Ga0501080_0012620 3300049742 Bacteria 7745
209 Ga0501080_0023495 3300049742 Bacteria 5714
210 Ga0501080_0138406 3300049742 Bacteria 2252
211 Ga0501080_0949163 3300049742 Bacteria 748
212 Ga0501044_0062291 3300049823 Bacteria 3813
213 Ga0501044_0068911 3300049823 Bacteria 3602
214 nmdc:mga00v17_35844_c1 3300050491 Bacteria 2955
215 nmdc:mga0yw44_126081_c1 3300050492 Bacteria 1653
216 nmdc:mga0yw44_1921_c1 3300050492 Bacteria 8588
217 nmdc:mga05p37_57718_c1 3300050507 Bacteria 4781
218 nmdc:mga05p37_975544_c1 3300050507 Bacteria 904
219 nmdc:mga09592_811692_c1 3300050508 Bacteria 791
220 nmdc:mga09592_9697_c1 3300050508 Bacteria 7821
221 nmdc:mga0qj67_132103_c1 3300050509 Bacteria 2022
222 nmdc:mga0qj67_432110_c1 3300050509 Bacteria 1061
223 nmdc:mga06r32_146834_c1 3300050510 Bacteria 2336
224 nmdc:mga06r32_152521_c1 3300050510 Bacteria 2290
225 nmdc:mga06r32_269530_c1 3300050510 Bacteria 1690
226 nmdc:mga0n895_2820_c1 3300050512 Bacteria 13754
227 nmdc:mga0rr50_603_c1 3300050513 Bacteria 19290
228 nmdc:mga0rr50_627953_c1 3300050513 Bacteria 916
229 nmdc:mga0rr50_96688_c1 3300050513 Bacteria 2311
230 nmdc:mga0a205_7166_c1 3300050515 Bacteria 10076
231 Ga0495601_0142596 3300053077 Bacteria 1563
232 Ga0495601_0309967 3300053077 Bacteria 1028
233 Ga0495612_0082913 3300053078 Bacteria 1349
234 Ga0495595_0049639 3300053084 Bacteria 1941
235 Ga0495595_0065090 3300053084 Unclassified 1714
236 Ga0495619_0013848 3300053085 Bacteria 5089
237 Ga0495619_0036422 3300053085 Bacteria 3204
238 Ga0500568_0000018 3300053139 Bacteria 196030
239 Ga0500604_0071213 3300053151 Bacteria 1109
240 Ga0500616_0003697 3300053153 Bacteria 11459
241 Ga0500616_0019540 3300053153 Bacteria 3817
242 Ga0501084_0000044 3300054114 Bacteria 97657
243 Ga0501084_0189990 3300054114 Bacteria 1733

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10091466 Ga0081455_100914662 192
2 3300039453 Ga0436362_1263326 Ga0436362_1263326_15_620 192
3 3300035117 Ga0373953_0194295 Ga0373953_0194295_70_765 208
4 3300046454 Ga0495592_0112871 Ga0495592_0112871_744_1439 208
5 3300046459 Ga0495629_0028053 Ga0495629_0028053_1920_2615 208
6 3300046463 Ga0495653_0178982 Ga0495653_0178982_598_1293 208
7 3300046511 Ga0495608_0045805 Ga0495608_0045805_762_1457 208
8 3300046517 Ga0495630_0110152 Ga0495630_0110152_816_1511 208
9 3300046529 Ga0495652_0227892 Ga0495652_0227892_221_916 208
10 3300046559 Ga0495667_0019801 Ga0495667_0019801_3733_4428 208
11 3300046642 Ga0495634_0163337 Ga0495634_0163337_228_923 208
12 3300046678 Ga0495599_0151877 Ga0495599_0151877_457_1152 208
13 3300047317 Ga0495604_0263682 Ga0495604_0263682_364_1059 208
14 3300047322 Ga0495680_0323262 Ga0495680_0323262_259_954 208
15 3300053084 Ga0495595_0065090 Ga0495595_0065090_604_1299 208
16 3300053085 Ga0495619_0036422 Ga0495619_0036422_464_1159 208
17 3300050513 nmdc:mga0rr50_96688_c1 nmdc:mga0rr50_96688_c1_162_812 209
18 3300049592 Ga0501076_0931513 Ga0501076_0931513_54_686 210
19 3300049586 Ga0501070_0034298 Ga0501070_0034298_2332_3030 211
20 3300005841 Ga0068863_100427410 Ga0068863_1004274102 215
21 3300009177 Ga0105248_10816890 Ga0105248_108168902 215
22 3300014325 Ga0163163_10116817 Ga0163163_101168173 215
23 3300025900 Ga0207710_10145226 Ga0207710_101452262 215
24 3300025941 Ga0207711_10345158 Ga0207711_103451582 215
25 3300028379 Ga0268266_10286608 Ga0268266_102866082 215
26 3300048911 Ga0496108_0043403 Ga0496108_0043403_2485_3198 215
27 3300048912 Ga0496109_0039077 Ga0496109_0039077_424_1137 215
28 3300048913 Ga0496110_0007325 Ga0496110_0007325_1429_2142 215
29 3300050492 nmdc:mga0yw44_126081_c1 nmdc:mga0yw44_126081_c1_978_1625 215
30 3300039438 Ga0436360_1364716 Ga0436360_1364716_2701_3387 220
31 3300039447 Ga0436361_0062143 Ga0436361_0062143_2109_2795 220
32 3300006914 Ga0075436_100186788 Ga0075436_1001867882 221
33 3300007076 Ga0075435_100234297 Ga0075435_1002342972 221
34 3300049571 Ga0501034_0012109 Ga0501034_0012109_384_1100 226
35 3300028800 Ga0265338_10192211 Ga0265338_101922112 227
36 3300037853 Ga0436364_1402491 Ga0436364_1402491_398_1084 228
37 3300005355 Ga0070671_100000828 Ga0070671_1000008287 231
38 3300025931 Ga0207644_10007251 Ga0207644_100072513 231
39 3300031995 Ga0307409_100820882 Ga0307409_1008208822 231
40 3300049570 Ga0501033_0061050 Ga0501033_0061050_1022_1729 231
41 3300049576 Ga0501040_0069021 Ga0501040_0069021_654_1349 231
42 3300049585 Ga0501069_0000005 Ga0501069_0000005_1700_2395 231
43 3300049586 Ga0501070_0000012 Ga0501070_0000012_183122_183817 231
44 3300049587 Ga0501071_0069404 Ga0501071_0069404_164_859 231
45 3300049742 Ga0501080_0012620 Ga0501080_0012620_5389_6084 231
46 3300054114 Ga0501084_0189990 Ga0501084_0189990_349_1044 231
47 3300005344 Ga0070661_100050959 Ga0070661_1000509593 232
48 3300005354 Ga0070675_100446816 Ga0070675_1004468162 232
49 3300005457 Ga0070662_100646171 Ga0070662_1006461711 232
50 3300005458 Ga0070681_10162919 Ga0070681_101629191 232
51 3300005467 Ga0070706_100348449 Ga0070706_1003484491 232
52 3300006038 Ga0075365_10006113 Ga0075365_100061137 232
53 3300009098 Ga0105245_10009809 Ga0105245_100098093 232
54 3300009176 Ga0105242_10158479 Ga0105242_101584792 232
55 3300009176 Ga0105242_10417694 Ga0105242_104176942 232
56 3300013296 Ga0157374_11176714 Ga0157374_111767141 232
57 3300013297 Ga0157378_10147948 Ga0157378_101479482 232
58 3300021384 Ga0213876_10045597 Ga0213876_100455972 232
59 3300025901 Ga0207688_10195812 Ga0207688_101958122 232
60 3300025926 Ga0207659_10651977 Ga0207659_106519771 232
61 3300025927 Ga0207687_10010563 Ga0207687_100105636 232
62 3300025934 Ga0207686_10300728 Ga0207686_103007282 232
63 3300026078 Ga0207702_10168160 Ga0207702_101681601 232
64 3300028380 Ga0268265_10463765 Ga0268265_104637652 232
65 3300035724 Ga0373933_0080914 Ga0373933_0080914_166_864 232
66 3300039437 Ga0436365_0066661 Ga0436365_0066661_164_862 232
67 3300039437 Ga0436365_1113958 Ga0436365_1113958_1348_2046 232
68 3300039453 Ga0436362_1004883 Ga0436362_1004883_579_1277 232
69 3300041512 Ga0451853_1054454 Ga0451853_1054454_262_960 232
70 3300044684 Ga0466966_0074402 Ga0466966_0074402_607_1311 232
71 3300046459 Ga0495629_0245243 Ga0495629_0245243_115_816 232
72 3300046462 Ga0495651_0038636 Ga0495651_0038636_2642_3340 232
73 3300046463 Ga0495653_0123735 Ga0495653_0123735_310_1008 232
74 3300046511 Ga0495608_0082394 Ga0495608_0082394_1050_1748 232
75 3300046511 Ga0495608_0322723 Ga0495608_0322723_23_802 232
76 3300046514 Ga0495618_0041658 Ga0495618_0041658_539_1240 232
77 3300046533 Ga0495640_0046720 Ga0495640_0046720_12_713 232
78 3300046535 Ga0495586_0111699 Ga0495586_0111699_611_1312 232
79 3300046559 Ga0495667_0042874 Ga0495667_0042874_2120_2818 232
80 3300046675 Ga0495657_0040620 Ga0495657_0040620_305_1003 232
81 3300046679 Ga0495623_0032405 Ga0495623_0032405_2156_2854 232
82 3300046689 Ga0495613_0006196 Ga0495613_0006196_5139_5840 232
83 3300046689 Ga0495613_0150195 Ga0495613_0150195_170_868 232
84 3300047315 Ga0495581_0200973 Ga0495581_0200973_54_752 232
85 3300047317 Ga0495604_0037451 Ga0495604_0037451_1365_2063 232
86 3300047319 Ga0495674_0611758 Ga0495674_0611758_134_832 232
87 3300047320 Ga0495672_0001621 Ga0495672_0001621_18434_19132 232
88 3300047322 Ga0495680_0190108 Ga0495680_0190108_742_1440 232
89 3300047444 Ga0495675_0168248 Ga0495675_0168248_304_1002 232
90 3300048089 Ga0495614_0018084 Ga0495614_0018084_1063_1761 232
91 3300048089 Ga0495614_0076095 Ga0495614_0076095_20_721 232
92 3300049568 Ga0501031_0044749 Ga0501031_0044749_1382_2080 232
93 3300049573 Ga0501037_0046402 Ga0501037_0046402_831_1529 232
94 3300049574 Ga0501038_0112193 Ga0501038_0112193_880_1578 232
95 3300049579 Ga0501043_0063770 Ga0501043_0063770_1068_1766 232
96 3300049581 Ga0501047_0065822 Ga0501047_0065822_1032_1730 232
97 3300049586 Ga0501070_0018438 Ga0501070_0018438_914_1612 232
98 3300049823 Ga0501044_0068911 Ga0501044_0068911_912_1610 232
99 3300050492 nmdc:mga0yw44_1921_c1 nmdc:mga0yw44_1921_c1_2510_3208 232
100 3300053084 Ga0495595_0049639 Ga0495595_0049639_219_917 232
101 3300053139 Ga0500568_0000018 Ga0500568_0000018_168292_168990 232
102 3300053151 Ga0500604_0071213 Ga0500604_0071213_19_729 232
103 3300053153 Ga0500616_0019540 Ga0500616_0019540_847_1575 232
104 3300006038 Ga0075365_10042547 Ga0075365_100425473 233
105 3300006846 Ga0075430_100101277 Ga0075430_1001012772 233
106 3300006847 Ga0075431_100240985 Ga0075431_1002409852 233
107 3300025927 Ga0207687_10010669 Ga0207687_100106692 233
108 3300039062 Ga0400483_038664 Ga0400483_038664_3868_4569 233
109 3300049583 Ga0501067_0072693 Ga0501067_0072693_739_1452 233
110 3300049584 Ga0501068_0000921 Ga0501068_0000921_11647_12360 233
111 3300049588 Ga0501072_0006465 Ga0501072_0006465_6689_7402 233
112 3300049742 Ga0501080_0949163 Ga0501080_0949163_33_737 233
113 3300050509 nmdc:mga0qj67_132103_c1 nmdc:mga0qj67_132103_c1_1176_1880 233
114 3300005535 Ga0070684_100409277 Ga0070684_1004092771 234
115 3300049571 Ga0501034_0048704 Ga0501034_0048704_3462_4166 234
116 3300005445 Ga0070708_100001784 Ga0070708_10000178410 236
117 3300005456 Ga0070678_100792518 Ga0070678_1007925181 236
118 3300005467 Ga0070706_100150874 Ga0070706_1001508743 236
119 3300005471 Ga0070698_100002794 Ga0070698_1000027947 236
120 3300005471 Ga0070698_100180479 Ga0070698_1001804792 236
121 3300005536 Ga0070697_100127431 Ga0070697_1001274312 236
122 3300005985 Ga0081539_10052796 Ga0081539_100527963 236
123 3300006048 Ga0075363_100025763 Ga0075363_1000257632 236
124 3300006173 Ga0070716_100160055 Ga0070716_1001600551 236
125 3300006844 Ga0075428_100118879 Ga0075428_1001188793 236
126 3300006846 Ga0075430_100095767 Ga0075430_1000957672 236
127 3300006846 Ga0075430_100568552 Ga0075430_1005685521 236
128 3300006847 Ga0075431_100014754 Ga0075431_1000147549 236
129 3300006847 Ga0075431_100036719 Ga0075431_1000367196 236
130 3300006847 Ga0075431_100162220 Ga0075431_1001622203 236
131 3300006852 Ga0075433_10001177 Ga0075433_100011776 236
132 3300006871 Ga0075434_100001761 Ga0075434_1000017612 236
133 3300006880 Ga0075429_100001169 Ga0075429_10000116913 236
134 3300006880 Ga0075429_100680068 Ga0075429_1006800681 236
135 3300007076 Ga0075435_100026887 Ga0075435_1000268873 236
136 3300009147 Ga0114129_10068624 Ga0114129_100686243 236
137 3300009147 Ga0114129_10137889 Ga0114129_101378893 236
138 3300010375 Ga0105239_10551975 Ga0105239_105519752 236
139 3300014325 Ga0163163_10051085 Ga0163163_100510853 236
140 3300025910 Ga0207684_10034610 Ga0207684_100346105 236
141 3300025922 Ga0207646_10189019 Ga0207646_101890192 236
142 3300025939 Ga0207665_10072159 Ga0207665_100721592 236
143 3300031251 Ga0265327_10055064 Ga0265327_100550642 236
144 3300031251 Ga0265327_10072950 Ga0265327_100729503 236
145 3300035083 Ga0373926_0147267 Ga0373926_0147267_108_818 236
146 3300035692 Ga0373935_0180289 Ga0373935_0180289_399_1109 236
147 3300039062 Ga0400483_139200 Ga0400483_139200_5115_5828 236
148 3300046463 Ga0495653_0076781 Ga0495653_0076781_185_895 236
149 3300046477 Ga0495664_0208735 Ga0495664_0208735_267_977 236
150 3300046499 Ga0495594_0242132 Ga0495594_0242132_246_956 236
151 3300046511 Ga0495608_0051177 Ga0495608_0051177_1815_2525 236
152 3300046516 Ga0495628_0016476 Ga0495628_0016476_758_1468 236
153 3300046516 Ga0495628_0101892 Ga0495628_0101892_1362_2072 236
154 3300046517 Ga0495630_0024941 Ga0495630_0024941_3358_4068 236
155 3300046517 Ga0495630_0047505 Ga0495630_0047505_1952_2662 236
156 3300046517 Ga0495630_0104963 Ga0495630_0104963_570_1280 236
157 3300046517 Ga0495630_0136445 Ga0495630_0136445_106_816 236
158 3300046517 Ga0495630_0194536 Ga0495630_0194536_537_1247 236
159 3300046517 Ga0495630_0341532 Ga0495630_0341532_34_744 236
160 3300046526 Ga0495666_0080341 Ga0495666_0080341_739_1449 236
161 3300046526 Ga0495666_0108789 Ga0495666_0108789_513_1223 236
162 3300046533 Ga0495640_0439766 Ga0495640_0439766_24_746 236
163 3300046559 Ga0495667_0040026 Ga0495667_0040026_1146_1856 236
164 3300046559 Ga0495667_0045046 Ga0495667_0045046_1698_2408 236
165 3300046642 Ga0495634_0095473 Ga0495634_0095473_1024_1734 236
166 3300046642 Ga0495634_0222846 Ga0495634_0222846_58_768 236
167 3300046680 Ga0495646_0147668 Ga0495646_0147668_147_857 236
168 3300046689 Ga0495613_0122914 Ga0495613_0122914_251_961 236
169 3300046689 Ga0495613_0156486 Ga0495613_0156486_366_1076 236
170 3300046689 Ga0495613_0415016 Ga0495613_0415016_192_902 236
171 3300046794 Ga0495589_0237514 Ga0495589_0237514_97_807 236
172 3300047319 Ga0495674_0103093 Ga0495674_0103093_542_1252 236
173 3300047321 Ga0495676_0053851 Ga0495676_0053851_933_1643 236
174 3300047322 Ga0495680_0099550 Ga0495680_0099550_1083_1793 236
175 3300047322 Ga0495680_0416456 Ga0495680_0416456_103_825 236
176 3300047444 Ga0495675_0017635 Ga0495675_0017635_265_975 236
177 3300047471 Ga0495684_0026020 Ga0495684_0026020_431_1141 236
178 3300048903 Ga0496100_0084766 Ga0496100_0084766_457_1167 236
179 3300048905 Ga0496102_0557876 Ga0496102_0557876_316_1026 236
180 3300048907 Ga0496104_0042240 Ga0496104_0042240_1173_1883 236
181 3300048908 Ga0496105_0397992 Ga0496105_0397992_82_792 236
182 3300048909 Ga0496106_0335709 Ga0496106_0335709_388_1098 236
183 3300048910 Ga0496107_0272086 Ga0496107_0272086_243_953 236
184 3300048912 Ga0496109_0069358 Ga0496109_0069358_677_1387 236
185 3300048912 Ga0496109_0524737 Ga0496109_0524737_289_999 236
186 3300048912 Ga0496109_0624512 Ga0496109_0624512_290_1000 236
187 3300048915 Ga0496112_0050051 Ga0496112_0050051_897_1607 236
188 3300048918 Ga0496115_0043775 Ga0496115_0043775_1156_1866 236
189 3300049571 Ga0501034_0088660 Ga0501034_0088660_408_1118 236
190 3300049572 Ga0501036_0030476 Ga0501036_0030476_3310_4020 236
191 3300049580 Ga0501046_0014607 Ga0501046_0014607_3545_4255 236
192 3300049581 Ga0501047_0117301 Ga0501047_0117301_1247_1957 236
193 3300049582 Ga0501048_0100263 Ga0501048_0100263_1106_1816 236
194 3300049590 Ga0501074_0096326 Ga0501074_0096326_1293_2003 236
195 3300049742 Ga0501080_0023495 Ga0501080_0023495_545_1255 236
196 3300049823 Ga0501044_0062291 Ga0501044_0062291_598_1308 236
197 3300050507 nmdc:mga05p37_57718_c1 nmdc:mga05p37_57718_c1_2167_2877 236
198 3300050507 nmdc:mga05p37_975544_c1 nmdc:mga05p37_975544_c1_133_843 236
199 3300050508 nmdc:mga09592_811692_c1 nmdc:mga09592_811692_c1_30_740 236
200 3300050508 nmdc:mga09592_9697_c1 nmdc:mga09592_9697_c1_823_1533 236
201 3300050509 nmdc:mga0qj67_432110_c1 nmdc:mga0qj67_432110_c1_94_804 236
202 3300050510 nmdc:mga06r32_146834_c1 nmdc:mga06r32_146834_c1_641_1351 236
203 3300050510 nmdc:mga06r32_152521_c1 nmdc:mga06r32_152521_c1_60_770 236
204 3300050510 nmdc:mga06r32_269530_c1 nmdc:mga06r32_269530_c1_258_968 236
205 3300050512 nmdc:mga0n895_2820_c1 nmdc:mga0n895_2820_c1_6644_7354 236
206 3300050513 nmdc:mga0rr50_603_c1 nmdc:mga0rr50_603_c1_6258_6968 236
207 3300050513 nmdc:mga0rr50_627953_c1 nmdc:mga0rr50_627953_c1_149_859 236
208 3300050515 nmdc:mga0a205_7166_c1 nmdc:mga0a205_7166_c1_3062_3772 236
209 3300053077 Ga0495601_0142596 Ga0495601_0142596_822_1532 236
210 3300053077 Ga0495601_0309967 Ga0495601_0309967_165_875 236
211 3300053078 Ga0495612_0082913 Ga0495612_0082913_572_1282 236
212 3300053085 Ga0495619_0013848 Ga0495619_0013848_3718_4428 236
213 3300053153 Ga0500616_0003697 Ga0500616_0003697_9266_9976 236
214 3300054114 Ga0501084_0000044 Ga0501084_0000044_43925_44635 236
215 3300021384 Ga0213876_10020152 Ga0213876_100201523 237
216 3300031903 Ga0307407_10036370 Ga0307407_100363703 237
217 3300031995 Ga0307409_100004925 Ga0307409_1000049256 237
218 3300032002 Ga0307416_100231799 Ga0307416_1002317992 237
219 3300032005 Ga0307411_10013302 Ga0307411_100133025 237
220 3300032126 Ga0307415_100209612 Ga0307415_1002096121 237
221 3300036712 Ga0316584_0230417 Ga0316584_0230417_621_1346 237
222 3300039437 Ga0436365_0266568 Ga0436365_0266568_1899_2612 237
223 3300041494 Ga0451837_0309349 Ga0451837_0309349_1437_2153 237
224 3300041509 Ga0451843_0868853 Ga0451843_0868853_63_779 237
225 3300046683 Ga0495658_0151240 Ga0495658_0151240_654_1367 237
226 3300049571 Ga0501034_0000121 Ga0501034_0000121_75252_75968 237
227 3300049571 Ga0501034_0014843 Ga0501034_0014843_5556_6269 237
228 3300049590 Ga0501074_0124926 Ga0501074_0124926_1116_1829 237
229 3300049742 Ga0501080_0138406 Ga0501080_0138406_480_1193 237
230 3300005338 Ga0068868_100056175 Ga0068868_1000561753 238
231 3300005441 Ga0070700_100373426 Ga0070700_1003734261 238
232 3300005842 Ga0068858_100379786 Ga0068858_1003797862 238
233 3300005843 Ga0068860_100506059 Ga0068860_1005060591 238
234 3300006051 Ga0075364_10280314 Ga0075364_102803142 238
235 3300006178 Ga0075367_10130891 Ga0075367_101308912 238
236 3300026023 Ga0207677_10151158 Ga0207677_101511582 238
237 3300026035 Ga0207703_10397048 Ga0207703_103970481 238
238 3300026075 Ga0207708_10311923 Ga0207708_103119232 238
239 3300028381 Ga0268264_10310663 Ga0268264_103106632 238
240 3300039062 Ga0400483_034255 Ga0400483_034255_316_1044 238
241 3300046506 Ga0495583_0213987 Ga0495583_0213987_31_747 238
242 3300048917 Ga0496114_0375815 Ga0496114_0375815_495_1223 238
243 3300050491 nmdc:mga00v17_35844_c1 nmdc:mga00v17_35844_c1_2161_2877 238

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01996

F420_ligase

F420-0:Gamma-glutamyl ligase

9

196

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g9i-assembly1.cif.gz_B crystal structure of homolog of f420-0:gamma-glutamyl ligase from archaeoglobus fulgidus reveals a novel fold. 0.8782 3 236
7ule-assembly1.cif.gz_A f420-1/gdp complex of f420-gamma glutamyl ligase (cofe) from archaeoglobus fulgidus 0.8778 3 237
7ule-assembly1.cif.gz_A f420-1/gdp complex of f420-gamma glutamyl ligase (cofe) from archaeoglobus fulgidus 0.8635 3 237
2g9i-assembly1.cif.gz_B crystal structure of homolog of f420-0:gamma-glutamyl ligase from archaeoglobus fulgidus reveals a novel fold. 0.8418 3 236
2p68-assembly1.cif.gz_A crystal structure of aq_1716 from aquifex aeolicus vf5 0.7636 119 144
ID Description Score Start End Superfamily
2phnA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9493 3 222 3.30.1330.100
2phnA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9375 3 222 3.30.1330.100
2g9iB01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9187 3 222 3.30.1330.100
2g9iB01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9056 3 222 3.30.1330.100
af_Q6IRJ7_231_307_1.10.220.10 Mainly Alpha;Orthogonal Bundle;Annexin V; domain 1;Annexin 0.8132 117 137 1.10.220.10
ID Description Score Start End GO Terms
AF-A0A6L8JSU4-F1-model_v4 deleted 0.9877 3 153
AF-A0A538L702-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9867 5 196 GO:0005525
GO:0046872
GO:0052618
AF-A0A6B1G5M6-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9858 3 238 GO:0005525
GO:0046872
GO:0052618
AF-A0A351EY15-F1-model_v4 Coenzyme F420-0:L-glutamate ligase 0.9844 3 238 GO:0005525
GO:0046872
GO:0052618
AF-A0A520Y5E7-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9815 2 238 GO:0005525
GO:0046872
GO:0052618

Feature Viewer

pLDDT pTM Quality
90.79 0.9 High
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Predicted Structure (AlphaFold2)

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