F355405

General Info

Members Datasets Scaffolds Average Seq Length
243 141 243 296

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100032630|Ga0070679_1000326306
Length 332
Sequence MGANIIHPTQRRKAQQTRPARLHSLLESLNYVEGDFRLARMNVLQDSLLELIRRTSTEIPDDVHKAILGSLEQEKKGTIAESAMKIIDQNIALAKNKSQPICQDTGSIIFYVDCPVGYDQISFEEAAREAVKLATKKGYLRQNSVDSVTGKNDGTNLGPGSPTVHFHQHRSPEISVRLVLKGGGCENVGAQYSLPNEKLKANRDLDGCRKVILDAVLQAQGKGCGPGILGVCIGGDRATGYEHSKQQLLRKLDDSNTSPEIDKLEKDIVETANKLGIGPMGFGGKTTLLGTKIGVLNRLPASYFVSVSYMCWAYRRHGVTLDGDGKIGKWLY

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
121 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.23
Rhizosphere 94.65
Stem 0
Stem Tuber 0
Unclassified 4.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10058561 3300003320 Bacteria 1995
2 rootH1_10335102 3300003323 Bacteria 1772
3 Ga0065707_10092632 3300005295 Bacteria 3742
4 Ga0070683_100000096 3300005329 Bacteria 57429
5 Ga0070670_100000025 3300005331 Bacteria 188514
6 Ga0070670_100017019 3300005331 Bacteria 6240
7 Ga0070670_100396668 3300005331 Bacteria 1218
8 Ga0068869_100017170 3300005334 Bacteria 4899
9 Ga0068869_100112018 3300005334 Bacteria 2077
10 Ga0070666_10047777 3300005335 Bacteria 2874
11 Ga0070680_100015765 3300005336 Bacteria 5934
12 Ga0070682_100000007 3300005337 Bacteria 346590
13 Ga0068868_100000482 3300005338 Bacteria 26485
14 Ga0068868_100004370 3300005338 Bacteria 9906
15 Ga0070689_100001793 3300005340 Bacteria 13793
16 Ga0070689_100007967 3300005340 Bacteria 7434
17 Ga0070687_100085498 3300005343 Bacteria 1731
18 Ga0070687_100113955 3300005343 Bacteria 1535
19 Ga0070692_10020338 3300005345 Bacteria 3218
20 Ga0070692_10164998 3300005345 Bacteria 1272
21 Ga0070675_100000010 3300005354 Bacteria 243396
22 Ga0070674_100069346 3300005356 Bacteria 2487
23 Ga0070673_100008473 3300005364 Bacteria 6836
24 Ga0070688_100188798 3300005365 Bacteria 1434
25 Ga0070688_100200958 3300005365 Bacteria 1394
26 Ga0070714_100003078 3300005435 Bacteria 12373
27 Ga0070713_100021496 3300005436 Bacteria 4966
28 Ga0070713_100060273 3300005436 Bacteria 3172
29 Ga0070701_10013541 3300005438 Unclassified 3714
30 Ga0070700_100000182 3300005441 Bacteria 35745
31 Ga0070708_100114775 3300005445 Bacteria 2478
32 Ga0068867_100078843 3300005459 Bacteria 2478
33 Ga0070679_100032630 3300005530 Bacteria 5153
34 Ga0070684_100001248 3300005535 Bacteria 18219
35 Ga0068853_100086901 3300005539 Unclassified 2743
36 Ga0070672_100001024 3300005543 Bacteria 17002
37 Ga0070686_100001758 3300005544 Bacteria 12130
38 Ga0070693_100009666 3300005547 Bacteria 4801
39 Ga0068855_100339842 3300005563 Bacteria 1656
40 Ga0068855_100485978 3300005563 Bacteria 1343
41 Ga0068857_100011191 3300005577 Bacteria 7803
42 Ga0068854_100002762 3300005578 Bacteria 10905
43 Ga0068856_100102569 3300005614 Bacteria 2854
44 Ga0068859_100117148 3300005617 Bacteria 2729
45 Ga0068864_100000007 3300005618 Bacteria 392187
46 Ga0068866_10067556 3300005718 Bacteria 1877
47 Ga0068861_100024386 3300005719 Bacteria 4374
48 Ga0068851_10185286 3300005834 Unclassified 1155
49 Ga0068858_100001722 3300005842 Bacteria 22354
50 Ga0068858_100252830 3300005842 Bacteria 1674
51 Ga0070717_10000336 3300006028 Bacteria 30289
52 Ga0070716_100004310 3300006173 Bacteria 6780
53 Ga0070716_100247207 3300006173 Bacteria 1213
54 Ga0075428_100001866 3300006844 Bacteria 22580
55 Ga0075428_100193264 3300006844 Bacteria 2201
56 Ga0075430_100275407 3300006846 Unclassified 1392
57 Ga0075431_100000563 3300006847 Bacteria 31265
58 Ga0075431_100013407 3300006847 Bacteria 8282
59 Ga0075431_100041229 3300006847 Bacteria 4759
60 Ga0075434_100083982 3300006871 Bacteria 3183
61 Ga0075429_100428395 3300006880 Unclassified 1159
62 Ga0068865_100034079 3300006881 Bacteria 3414
63 Ga0068865_100083842 3300006881 Bacteria 2295
64 Ga0075436_100001644 3300006914 Bacteria 15270
65 Ga0097620_100117143 3300006931 Bacteria 2729
66 Ga0075435_100000115 3300007076 Bacteria 44397
67 Ga0075435_100018657 3300007076 Bacteria 5284
68 Ga0105244_10032111 3300009036 Bacteria 2783
69 Ga0105240_10103033 3300009093 Bacteria 3468
70 Ga0105240_10124204 3300009093 Bacteria 3104
71 Ga0105240_10203385 3300009093 Bacteria 2319
72 Ga0105240_10535377 3300009093 Unclassified 1298
73 Ga0111539_10000003 3300009094 Bacteria 880006
74 Ga0111539_10021070 3300009094 Bacteria 8027
75 Ga0105245_10000055 3300009098 Bacteria 124667
76 Ga0105245_10000163 3300009098 Bacteria 62999
77 Ga0105245_10002002 3300009098 Bacteria 18493
78 Ga0105245_10039433 3300009098 Bacteria 4204
79 Ga0105238_10000002 3300009551 Bacteria 772711
80 Ga0105239_10024650 3300010375 Bacteria 6627
81 Ga0105239_10032257 3300010375 Bacteria 5757
82 Ga0157369_10000459 3300013105 Bacteria 54061
83 Ga0157369_10800838 3300013105 Unclassified 968
84 Ga0157374_10000016 3300013296 Bacteria 293656
85 Ga0157374_10115955 3300013296 Bacteria 2580
86 Ga0157374_10832689 3300013296 Unclassified 939
87 Ga0157378_10000439 3300013297 Bacteria 40268
88 Ga0157378_10001347 3300013297 Bacteria 22087
89 Ga0157378_10006693 3300013297 Bacteria 10069
90 Ga0157378_10113534 3300013297 Bacteria 2487
91 Ga0163162_10015944 3300013306 Bacteria 7343
92 Ga0157375_10000003 3300013308 Bacteria 476325
93 Ga0157375_10000029 3300013308 Bacteria 199310
94 Ga0157375_10000129 3300013308 Bacteria 75013
95 Ga0157375_10000546 3300013308 Bacteria 33819
96 Ga0157375_10039550 3300013308 Bacteria 4540
97 Ga0157375_10185079 3300013308 Bacteria 2235
98 Ga0157375_10256005 3300013308 Bacteria 1912
99 Ga0163163_10000098 3300014325 Bacteria 91630
100 Ga0163163_10080170 3300014325 Bacteria 3264
101 Ga0163163_10192186 3300014325 Bacteria 2089
102 Ga0157377_10000004 3300014745 Bacteria 430019
103 Ga0157377_10000108 3300014745 Bacteria 56604
104 Ga0157376_10000018 3300014969 Bacteria 259397
105 Ga0157376_10022944 3300014969 Unclassified 4874
106 Ga0213873_10000001 3300021358 Bacteria 1657979
107 Ga0213873_10001249 3300021358 Archaea 4185
108 Ga0213876_10000002 3300021384 Bacteria 1168769
109 Ga0213876_10000203 3300021384 Bacteria 60770
110 Ga0213876_10004910 3300021384 Bacteria 7412
111 Ga0207655_1037768 3300025728 Bacteria 2121
112 Ga0207705_10065955 3300025909 Bacteria 2618
113 Ga0207695_10048582 3300025913 Bacteria 4480
114 Ga0207695_10089095 3300025913 Bacteria 3103
115 Ga0207695_10146915 3300025913 Bacteria 2301
116 Ga0207695_10219778 3300025913 Bacteria 1808
117 Ga0207695_10307957 3300025913 Bacteria 1474
118 Ga0207660_10018971 3300025917 Bacteria 4594
119 Ga0207694_10000001 3300025924 Bacteria 4078485
120 Ga0207650_10000079 3300025925 Bacteria 130505
121 Ga0207650_10010337 3300025925 Bacteria 6399
122 Ga0207650_10061962 3300025925 Bacteria 2794
123 Ga0207659_10000001 3300025926 Bacteria 660958
124 Ga0207687_10000035 3300025927 Bacteria 124800
125 Ga0207687_10000830 3300025927 Bacteria 20887
126 Ga0207687_10001164 3300025927 Bacteria 17956
127 Ga0207700_10026752 3300025928 Bacteria 4028
128 Ga0207700_10047877 3300025928 Bacteria 3172
129 Ga0207664_10020839 3300025929 Bacteria 4864
130 Ga0207686_10062955 3300025934 Bacteria 2357
131 Ga0207670_10001971 3300025936 Bacteria 10761
132 Ga0207670_10009454 3300025936 Bacteria 5564
133 Ga0207669_10042660 3300025937 Bacteria 2650
134 Ga0207665_10012674 3300025939 Bacteria 5543
135 Ga0207665_10104161 3300025939 Bacteria 1985
136 Ga0207691_10002795 3300025940 Bacteria 17023
137 Ga0207689_10001961 3300025942 Bacteria 19432
138 Ga0207661_10000037 3300025944 Bacteria 148458
139 Ga0207661_10230401 3300025944 Bacteria 1640
140 Ga0207661_10584015 3300025944 Bacteria 1025
141 Ga0207667_10399718 3300025949 Bacteria 1399
142 Ga0207677_10000001 3300026023 Bacteria 534789
143 Ga0207677_10002484 3300026023 Bacteria 9671
144 Ga0207703_10000069 3300026035 Bacteria 124592
145 Ga0207703_10378945 3300026035 Bacteria 1308
146 Ga0207639_10000013 3300026041 Bacteria 293084
147 Ga0207639_10143881 3300026041 Bacteria 1990
148 Ga0207708_10000027 3300026075 Bacteria 166457
149 Ga0207648_10126086 3300026089 Bacteria 2252
150 Ga0207648_10209557 3300026089 Unclassified 1730
151 Ga0207676_10000015 3300026095 Bacteria 329100
152 Ga0207676_10099985 3300026095 Bacteria 2402
153 Ga0207674_10023683 3300026116 Bacteria 6572
154 Ga0207674_10199860 3300026116 Bacteria 1948
155 Ga0207675_100004116 3300026118 Bacteria 14076
156 Ga0207428_10000001 3300027907 Bacteria 1034622
157 Ga0265318_10097681 3300028577 Bacteria 1081
158 Ga0265338_10025770 3300028800 Bacteria 5955
159 Ga0265338_10038646 3300028800 Bacteria 4516
160 Ga0265338_10141546 3300028800 Bacteria 1883
161 Ga0307511_10001456 3300030521 Bacteria 25010
162 Ga0265320_10011816 3300031240 Bacteria 5117
163 Ga0316575_10055994 3300031665 Bacteria 1571
164 Ga0373932_0000063 3300035112 Bacteria 26320
165 Ga0373935_0267021 3300035692 Bacteria 1201
166 Ga0373927_0116638 3300035695 Bacteria 1741
167 Ga0373927_0139778 3300035695 Unclassified 1584
168 Ga0373947_0101301 3300035725 Bacteria 1810
169 Ga0373937_0018553 3300036401 Bacteria 6215
170 Ga0373937_0694743 3300036401 Unclassified 964
171 Ga0316584_0131069 3300036712 Bacteria 1873
172 Ga0373925_0005151 3300037068 Bacteria 9798
173 Ga0395905_0014286 3300037471 Bacteria 7586
174 Ga0395905_0031533 3300037471 Bacteria 4990
175 Ga0436364_0524146 3300037853 Bacteria 2067
176 Ga0436365_0507938 3300039437 Bacteria 8156
177 Ga0436365_0820057 3300039437 Bacteria 16698
178 Ga0436365_1583131 3300039437 Bacteria 68276
179 Ga0436362_0087447 3300039453 Bacteria 8087
180 Ga0436362_0272072 3300039453 Bacteria 138134
181 Ga0451577_0001886 3300042876 Bacteria 26682
182 Ga0451577_0003194 3300042876 Bacteria 18412
183 Ga0451577_0012091 3300042876 Bacteria 8119
184 Ga0451577_0105193 3300042876 Bacteria 2522
185 Ga0451577_0175711 3300042876 Bacteria 1930
186 Ga0451577_0194647 3300042876 Unclassified 1829
187 Ga0451577_0446885 3300042876 Unclassified 1174
188 Ga0453683_0058112 3300044673 Unclassified 2420
189 Ga0466964_0042179 3300044706 Bacteria 1848
190 Ga0453684_0002080 3300044712 Bacteria 50813
191 Ga0453684_0014556 3300044712 Bacteria 12560
192 Ga0453684_0016193 3300044712 Bacteria 11685
193 Ga0453684_0016553 3300044712 Bacteria 11515
194 Ga0453684_0035874 3300044712 Bacteria 6844
195 Ga0453684_0115760 3300044712 Bacteria 3248
196 Ga0453684_0214489 3300044712 Bacteria 2235
197 Ga0453684_0554961 3300044712 Bacteria 1265
198 Ga0451576_0000246 3300045051 Bacteria 132778
199 Ga0451576_0063602 3300045051 Bacteria 3846
200 Ga0451576_0119165 3300045051 Bacteria 2748
201 Ga0451576_0201490 3300045051 Bacteria 2079
202 Ga0451576_0294694 3300045051 Bacteria 1696
203 Ga0451576_0429154 3300045051 Unclassified 1387
204 Ga0451576_0435384 3300045051 Unclassified 1376
205 Ga0451576_0760830 3300045051 Unclassified 1017
206 Ga0495641_0068026 3300046461 Unclassified 1601
207 Ga0495666_0000894 3300046526 Bacteria 13969
208 Ga0495666_0088691 3300046526 Bacteria 1461
209 Ga0495666_0100487 3300046526 Unclassified 1363
210 Ga0495586_0000012 3300046535 Bacteria 138093
211 Ga0495586_0016371 3300046535 Bacteria 3944
212 Ga0495645_0162058 3300046543 Unclassified 1546
213 Ga0495634_0009642 3300046642 Bacteria 7112
214 Ga0495634_0036154 3300046642 Bacteria 3379
215 Ga0495657_0047201 3300046675 Bacteria 2912
216 Ga0495647_0060783 3300046681 Unclassified 1490
217 Ga0495658_0132048 3300046683 Unclassified 1521
218 Ga0495613_0024617 3300046689 Bacteria 4486
219 Ga0495674_0003001 3300047319 Bacteria 16443
220 Ga0495676_0009916 3300047321 Bacteria 8651
221 Ga0495679_015937 3300047446 Bacteria 2731
222 Ga0496112_0006309 3300048915 Bacteria 10409
223 Ga0496113_0097111 3300048916 Bacteria 2279
224 Ga0496115_0044407 3300048918 Bacteria 3544
225 Ga0501034_0041789 3300049571 Bacteria 4639
226 Ga0501073_0070700 3300049589 Bacteria 2431
227 Ga0501080_0006870 3300049742 Bacteria 10261
228 Ga0501083_0111830 3300049744 Bacteria 1795
229 nmdc:mga09592_355082_c1 3300050508 Unclassified 1268
230 nmdc:mga09592_566272_c1 3300050508 Unclassified 975
231 nmdc:mga0qj67_166522_c1 3300050509 Bacteria 1789
232 nmdc:mga0qj67_391577_c1 3300050509 Bacteria 1122
233 nmdc:mga06r32_113061_c1 3300050510 Bacteria 2672
234 nmdc:mga06r32_23953_c1 3300050510 Bacteria 5657
235 nmdc:mga06r32_583_c1 3300050510 Bacteria 31805
236 nmdc:mga08y16_1_c1 3300050511 Bacteria 1034622
237 nmdc:mga08y16_290254_c1 3300050511 Bacteria 1686
238 nmdc:mga08y16_31746_c1 3300050511 Bacteria 5553
239 nmdc:mga0n895_108605_c1 3300050512 Bacteria 2789
240 nmdc:mga0rr50_15605_c1 3300050513 Bacteria 5018
241 nmdc:mga0rr50_49_c1 3300050513 Bacteria 71590
242 nmdc:mga08x19_1341_c1 3300050514 Bacteria 15270
243 Ga0495655_0000097 3300053083 Bacteria 16445

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026035 Ga0207703_10378945 Ga0207703_103789452 274
2 3300013296 Ga0157374_10115955 Ga0157374_101159553 279
3 3300042876 Ga0451577_0012091 Ga0451577_0012091_1588_2466 280
4 3300005338 Ga0068868_100004370 Ga0068868_1000043704 284
5 3300005618 Ga0068864_100000007 Ga0068864_10000000712 284
6 3300006881 Ga0068865_100034079 Ga0068865_1000340792 284
7 3300013297 Ga0157378_10006693 Ga0157378_100066939 284
8 3300021384 Ga0213876_10004910 Ga0213876_100049103 284
9 3300025939 Ga0207665_10104161 Ga0207665_101041612 284
10 3300025944 Ga0207661_10230401 Ga0207661_102304012 284
11 3300026023 Ga0207677_10000001 Ga0207677_10000001402 284
12 3300026089 Ga0207648_10126086 Ga0207648_101260862 284
13 3300026095 Ga0207676_10000015 Ga0207676_10000015318 284
14 3300039437 Ga0436365_0507938 Ga0436365_0507938_5300_6214 284
15 3300005334 Ga0068869_100017170 Ga0068869_1000171704 285
16 3300005336 Ga0070680_100015765 Ga0070680_1000157657 285
17 3300005539 Ga0068853_100086901 Ga0068853_1000869014 285
18 3300005543 Ga0070672_100001024 Ga0070672_1000010246 285
19 3300005544 Ga0070686_100001758 Ga0070686_10000175813 285
20 3300005719 Ga0068861_100024386 Ga0068861_1000243864 285
21 3300006871 Ga0075434_100083982 Ga0075434_1000839822 285
22 3300013297 Ga0157378_10000439 Ga0157378_1000043929 285
23 3300013308 Ga0157375_10000003 Ga0157375_10000003370 285
24 3300013308 Ga0157375_10000029 Ga0157375_10000029140 285
25 3300025909 Ga0207705_10065955 Ga0207705_100659552 285
26 3300025917 Ga0207660_10018971 Ga0207660_100189716 285
27 3300025934 Ga0207686_10062955 Ga0207686_100629554 285
28 3300025940 Ga0207691_10002795 Ga0207691_1000279511 285
29 3300025942 Ga0207689_10001961 Ga0207689_100019612 285
30 3300026041 Ga0207639_10143881 Ga0207639_101438811 285
31 3300026118 Ga0207675_100004116 Ga0207675_1000041169 285
32 3300030521 Ga0307511_10001456 Ga0307511_1000145613 285
33 3300044706 Ga0466964_0042179 Ga0466964_0042179_282_1193 285
34 3300047446 Ga0495679_015937 Ga0495679_015937_1667_2614 285
35 3300050512 nmdc:mga0n895_108605_c1 nmdc:mga0n895_108605_c1_757_1671 285
36 3300005295 Ga0065707_10092632 Ga0065707_100926322 286
37 3300005329 Ga0070683_100000096 Ga0070683_10000009636 286
38 3300005331 Ga0070670_100000025 Ga0070670_100000025159 286
39 3300005331 Ga0070670_100017019 Ga0070670_1000170196 286
40 3300005331 Ga0070670_100396668 Ga0070670_1003966682 286
41 3300005334 Ga0068869_100112018 Ga0068869_1001120183 286
42 3300005338 Ga0068868_100000482 Ga0068868_1000004828 286
43 3300005345 Ga0070692_10020338 Ga0070692_100203383 286
44 3300005345 Ga0070692_10164998 Ga0070692_101649982 286
45 3300005354 Ga0070675_100000010 Ga0070675_10000001037 286
46 3300005436 Ga0070713_100021496 Ga0070713_1000214963 286
47 3300005438 Ga0070701_10013541 Ga0070701_100135413 286
48 3300005441 Ga0070700_100000182 Ga0070700_10000018216 286
49 3300005445 Ga0070708_100114775 Ga0070708_1001147752 286
50 3300005535 Ga0070684_100001248 Ga0070684_1000012485 286
51 3300005547 Ga0070693_100009666 Ga0070693_1000096664 286
52 3300005578 Ga0068854_100002762 Ga0068854_1000027623 286
53 3300005834 Ga0068851_10185286 Ga0068851_101852861 286
54 3300006028 Ga0070717_10000336 Ga0070717_1000033626 286
55 3300006173 Ga0070716_100247207 Ga0070716_1002472072 286
56 3300006846 Ga0075430_100275407 Ga0075430_1002754072 286
57 3300006847 Ga0075431_100000563 Ga0075431_10000056333 286
58 3300006914 Ga0075436_100001644 Ga0075436_10000164416 286
59 3300007076 Ga0075435_100000115 Ga0075435_10000011527 286
60 3300009036 Ga0105244_10032111 Ga0105244_100321112 286
61 3300009094 Ga0111539_10000003 Ga0111539_10000003696 286
62 3300009098 Ga0105245_10000055 Ga0105245_10000055115 286
63 3300009098 Ga0105245_10002002 Ga0105245_1000200215 286
64 3300009551 Ga0105238_10000002 Ga0105238_10000002188 286
65 3300013105 Ga0157369_10000459 Ga0157369_1000045913 286
66 3300013296 Ga0157374_10000016 Ga0157374_10000016278 286
67 3300013306 Ga0163162_10015944 Ga0163162_100159445 286
68 3300013308 Ga0157375_10000546 Ga0157375_1000054634 286
69 3300013308 Ga0157375_10039550 Ga0157375_100395504 286
70 3300014745 Ga0157377_10000004 Ga0157377_10000004235 286
71 3300014745 Ga0157377_10000108 Ga0157377_1000010836 286
72 3300014969 Ga0157376_10000018 Ga0157376_10000018197 286
73 3300021358 Ga0213873_10000001 Ga0213873_10000001993 286
74 3300021358 Ga0213873_10001249 Ga0213873_100012492 286
75 3300021384 Ga0213876_10000002 Ga0213876_10000002548 286
76 3300021384 Ga0213876_10000203 Ga0213876_1000020354 286
77 3300025728 Ga0207655_1037768 Ga0207655_10377682 286
78 3300025924 Ga0207694_10000001 Ga0207694_10000001189 286
79 3300025925 Ga0207650_10000079 Ga0207650_1000007974 286
80 3300025925 Ga0207650_10010337 Ga0207650_100103374 286
81 3300025925 Ga0207650_10061962 Ga0207650_100619621 286
82 3300025926 Ga0207659_10000001 Ga0207659_10000001222 286
83 3300025927 Ga0207687_10000035 Ga0207687_10000035114 286
84 3300025927 Ga0207687_10001164 Ga0207687_1000116415 286
85 3300025928 Ga0207700_10026752 Ga0207700_100267524 286
86 3300025944 Ga0207661_10000037 Ga0207661_1000003783 286
87 3300026023 Ga0207677_10002484 Ga0207677_100024844 286
88 3300026041 Ga0207639_10000013 Ga0207639_10000013301 286
89 3300026075 Ga0207708_10000027 Ga0207708_1000002766 286
90 3300026116 Ga0207674_10199860 Ga0207674_101998603 286
91 3300027907 Ga0207428_10000001 Ga0207428_10000001842 286
92 3300035112 Ga0373932_0000063 Ga0373932_0000063_11662_12573 286
93 3300039437 Ga0436365_0820057 Ga0436365_0820057_10193_11107 286
94 3300039437 Ga0436365_1583131 Ga0436365_1583131_11321_12232 286
95 3300039453 Ga0436362_0087447 Ga0436362_0087447_5889_6803 286
96 3300039453 Ga0436362_0272072 Ga0436362_0272072_77503_78414 286
97 3300049589 Ga0501073_0070700 Ga0501073_0070700_537_1448 286
98 3300049742 Ga0501080_0006870 Ga0501080_0006870_7724_8635 286
99 3300050508 nmdc:mga09592_355082_c1 nmdc:mga09592_355082_c1_229_1137 286
100 3300050510 nmdc:mga06r32_583_c1 nmdc:mga06r32_583_c1_30101_31009 286
101 3300050511 nmdc:mga08y16_1_c1 nmdc:mga08y16_1_c1_91408_92328 286
102 3300050513 nmdc:mga0rr50_49_c1 nmdc:mga0rr50_49_c1_45813_46721 286
103 3300050514 nmdc:mga08x19_1341_c1 nmdc:mga08x19_1341_c1_14214_15122 286
104 3300053083 Ga0495655_0000097 Ga0495655_0000097_2312_3223 286
105 3300013296 Ga0157374_10832689 Ga0157374_108326891 290
106 3300005337 Ga0070682_100000007 Ga0070682_10000000711 291
107 3300005340 Ga0070689_100007967 Ga0070689_1000079675 291
108 3300005356 Ga0070674_100069346 Ga0070674_1000693464 291
109 3300005364 Ga0070673_100008473 Ga0070673_1000084733 291
110 3300005842 Ga0068858_100001722 Ga0068858_10000172219 291
111 3300006173 Ga0070716_100004310 Ga0070716_1000043108 291
112 3300007076 Ga0075435_100018657 Ga0075435_1000186574 291
113 3300009098 Ga0105245_10000163 Ga0105245_1000016325 291
114 3300010375 Ga0105239_10032257 Ga0105239_100322572 291
115 3300013297 Ga0157378_10001347 Ga0157378_100013477 291
116 3300014325 Ga0163163_10080170 Ga0163163_100801703 291
117 3300025927 Ga0207687_10000830 Ga0207687_100008307 291
118 3300025936 Ga0207670_10001971 Ga0207670_100019716 291
119 3300025937 Ga0207669_10042660 Ga0207669_100426604 291
120 3300025939 Ga0207665_10012674 Ga0207665_100126748 291
121 3300026035 Ga0207703_10000069 Ga0207703_1000006934 291
122 3300037471 Ga0395905_0014286 Ga0395905_0014286_317_1207 291
123 3300037853 Ga0436364_0524146 Ga0436364_0524146_1092_2006 291
124 3300042876 Ga0451577_0001886 Ga0451577_0001886_2711_3628 291
125 3300042876 Ga0451577_0175711 Ga0451577_0175711_164_1039 291
126 3300042876 Ga0451577_0194647 Ga0451577_0194647_877_1767 291
127 3300044673 Ga0453683_0058112 Ga0453683_0058112_1076_1993 291
128 3300044712 Ga0453684_0002080 Ga0453684_0002080_40287_41162 291
129 3300044712 Ga0453684_0016553 Ga0453684_0016553_2622_3539 291
130 3300044712 Ga0453684_0214489 Ga0453684_0214489_440_1321 291
131 3300044712 Ga0453684_0554961 Ga0453684_0554961_146_1021 291
132 3300045051 Ga0451576_0000246 Ga0451576_0000246_20832_21722 291
133 3300045051 Ga0451576_0201490 Ga0451576_0201490_1157_2032 291
134 3300050513 nmdc:mga0rr50_15605_c1 nmdc:mga0rr50_15605_c1_744_1655 291
135 3300003323 rootH1_10335102 rootH1_103351022 292
136 3300005335 Ga0070666_10047777 Ga0070666_100477773 292
137 3300005340 Ga0070689_100001793 Ga0070689_1000017934 292
138 3300005343 Ga0070687_100085498 Ga0070687_1000854982 292
139 3300005343 Ga0070687_100113955 Ga0070687_1001139551 292
140 3300005365 Ga0070688_100188798 Ga0070688_1001887982 292
141 3300005365 Ga0070688_100200958 Ga0070688_1002009581 292
142 3300005435 Ga0070714_100003078 Ga0070714_1000030789 292
143 3300005436 Ga0070713_100060273 Ga0070713_1000602733 292
144 3300005459 Ga0068867_100078843 Ga0068867_1000788434 292
145 3300005530 Ga0070679_100032630 Ga0070679_1000326306 292
146 3300005563 Ga0068855_100339842 Ga0068855_1003398422 292
147 3300005563 Ga0068855_100485978 Ga0068855_1004859781 292
148 3300005577 Ga0068857_100011191 Ga0068857_1000111917 292
149 3300005614 Ga0068856_100102569 Ga0068856_1001025695 292
150 3300005617 Ga0068859_100117148 Ga0068859_1001171483 292
151 3300005718 Ga0068866_10067556 Ga0068866_100675562 292
152 3300005842 Ga0068858_100252830 Ga0068858_1002528302 292
153 3300006844 Ga0075428_100001866 Ga0075428_1000018664 292
154 3300006844 Ga0075428_100193264 Ga0075428_1001932641 292
155 3300006847 Ga0075431_100013407 Ga0075431_1000134078 292
156 3300006847 Ga0075431_100041229 Ga0075431_1000412294 292
157 3300006880 Ga0075429_100428395 Ga0075429_1004283952 292
158 3300006881 Ga0068865_100083842 Ga0068865_1000838422 292
159 3300006931 Ga0097620_100117143 Ga0097620_1001171432 292
160 3300009093 Ga0105240_10103033 Ga0105240_101030335 292
161 3300009093 Ga0105240_10124204 Ga0105240_101242045 292
162 3300009093 Ga0105240_10203385 Ga0105240_102033853 292
163 3300009093 Ga0105240_10535377 Ga0105240_105353772 292
164 3300009094 Ga0111539_10021070 Ga0111539_100210705 292
165 3300009098 Ga0105245_10039433 Ga0105245_100394332 292
166 3300010375 Ga0105239_10024650 Ga0105239_100246503 292
167 3300013105 Ga0157369_10800838 Ga0157369_108008381 292
168 3300013297 Ga0157378_10113534 Ga0157378_101135342 292
169 3300013308 Ga0157375_10000129 Ga0157375_1000012915 292
170 3300013308 Ga0157375_10185079 Ga0157375_101850793 292
171 3300013308 Ga0157375_10256005 Ga0157375_102560052 292
172 3300014325 Ga0163163_10000098 Ga0163163_100000986 292
173 3300014325 Ga0163163_10192186 Ga0163163_101921862 292
174 3300014969 Ga0157376_10022944 Ga0157376_100229444 292
175 3300025913 Ga0207695_10048582 Ga0207695_100485824 292
176 3300025913 Ga0207695_10089095 Ga0207695_100890955 292
177 3300025913 Ga0207695_10146915 Ga0207695_101469152 292
178 3300025913 Ga0207695_10219778 Ga0207695_102197782 292
179 3300025913 Ga0207695_10307957 Ga0207695_103079572 292
180 3300025928 Ga0207700_10047877 Ga0207700_100478772 292
181 3300025929 Ga0207664_10020839 Ga0207664_100208397 292
182 3300025936 Ga0207670_10009454 Ga0207670_100094542 292
183 3300025944 Ga0207661_10584015 Ga0207661_105840152 292
184 3300025949 Ga0207667_10399718 Ga0207667_103997182 292
185 3300026089 Ga0207648_10209557 Ga0207648_102095571 292
186 3300026095 Ga0207676_10099985 Ga0207676_100999852 292
187 3300026116 Ga0207674_10023683 Ga0207674_100236832 292
188 3300028577 Ga0265318_10097681 Ga0265318_100976812 292
189 3300028800 Ga0265338_10025770 Ga0265338_100257703 292
190 3300028800 Ga0265338_10038646 Ga0265338_100386464 292
191 3300028800 Ga0265338_10141546 Ga0265338_101415462 292
192 3300031240 Ga0265320_10011816 Ga0265320_100118161 292
193 3300031665 Ga0316575_10055994 Ga0316575_100559942 292
194 3300035692 Ga0373935_0267021 Ga0373935_0267021_146_1024 292
195 3300035695 Ga0373927_0116638 Ga0373927_0116638_710_1588 292
196 3300035695 Ga0373927_0139778 Ga0373927_0139778_23_901 292
197 3300035725 Ga0373947_0101301 Ga0373947_0101301_756_1634 292
198 3300036401 Ga0373937_0018553 Ga0373937_0018553_1355_2233 292
199 3300036401 Ga0373937_0694743 Ga0373937_0694743_24_902 292
200 3300036712 Ga0316584_0131069 Ga0316584_0131069_816_1694 292
201 3300037068 Ga0373925_0005151 Ga0373925_0005151_8819_9697 292
202 3300037471 Ga0395905_0031533 Ga0395905_0031533_1647_2525 292
203 3300042876 Ga0451577_0003194 Ga0451577_0003194_8515_9393 292
204 3300042876 Ga0451577_0105193 Ga0451577_0105193_1022_1900 292
205 3300042876 Ga0451577_0446885 Ga0451577_0446885_277_1158 292
206 3300044712 Ga0453684_0014556 Ga0453684_0014556_478_1356 292
207 3300044712 Ga0453684_0016193 Ga0453684_0016193_7839_8717 292
208 3300044712 Ga0453684_0035874 Ga0453684_0035874_4352_5230 292
209 3300044712 Ga0453684_0115760 Ga0453684_0115760_815_1693 292
210 3300045051 Ga0451576_0063602 Ga0451576_0063602_1973_2851 292
211 3300045051 Ga0451576_0119165 Ga0451576_0119165_1425_2303 292
212 3300045051 Ga0451576_0294694 Ga0451576_0294694_321_1199 292
213 3300045051 Ga0451576_0429154 Ga0451576_0429154_155_1033 292
214 3300045051 Ga0451576_0435384 Ga0451576_0435384_231_1109 292
215 3300045051 Ga0451576_0760830 Ga0451576_0760830_55_933 292
216 3300046461 Ga0495641_0068026 Ga0495641_0068026_129_1007 292
217 3300046526 Ga0495666_0000894 Ga0495666_0000894_11402_12280 292
218 3300046526 Ga0495666_0088691 Ga0495666_0088691_426_1304 292
219 3300046526 Ga0495666_0100487 Ga0495666_0100487_236_1114 292
220 3300046535 Ga0495586_0000012 Ga0495586_0000012_77575_78453 292
221 3300046535 Ga0495586_0016371 Ga0495586_0016371_650_1528 292
222 3300046543 Ga0495645_0162058 Ga0495645_0162058_148_1026 292
223 3300046642 Ga0495634_0009642 Ga0495634_0009642_2021_2899 292
224 3300046642 Ga0495634_0036154 Ga0495634_0036154_2102_2980 292
225 3300046675 Ga0495657_0047201 Ga0495657_0047201_634_1512 292
226 3300046681 Ga0495647_0060783 Ga0495647_0060783_520_1398 292
227 3300046683 Ga0495658_0132048 Ga0495658_0132048_491_1369 292
228 3300046689 Ga0495613_0024617 Ga0495613_0024617_1420_2298 292
229 3300047319 Ga0495674_0003001 Ga0495674_0003001_14153_15031 292
230 3300047321 Ga0495676_0009916 Ga0495676_0009916_2603_3481 292
231 3300048915 Ga0496112_0006309 Ga0496112_0006309_9252_10319 292
232 3300048916 Ga0496113_0097111 Ga0496113_0097111_791_1858 292
233 3300048918 Ga0496115_0044407 Ga0496115_0044407_1861_2739 292
234 3300049571 Ga0501034_0041789 Ga0501034_0041789_2020_2898 292
235 3300049744 Ga0501083_0111830 Ga0501083_0111830_797_1675 292
236 3300050508 nmdc:mga09592_566272_c1 nmdc:mga09592_566272_c1_44_922 292
237 3300050509 nmdc:mga0qj67_166522_c1 nmdc:mga0qj67_166522_c1_192_1070 292
238 3300050509 nmdc:mga0qj67_391577_c1 nmdc:mga0qj67_391577_c1_26_913 292
239 3300050510 nmdc:mga06r32_113061_c1 nmdc:mga06r32_113061_c1_1228_2106 292
240 3300050510 nmdc:mga06r32_23953_c1 nmdc:mga06r32_23953_c1_1943_2830 292
241 3300050511 nmdc:mga08y16_290254_c1 nmdc:mga08y16_290254_c1_412_1290 292
242 3300050511 nmdc:mga08y16_31746_c1 nmdc:mga08y16_31746_c1_4155_5033 292
243 3300003320 rootH2_10058561 rootH2_100585611 293

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05681

Fumerase

Fumarate hydratase (Fumerase)

45

320

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xky-assembly1.cif.gz_A crystal structure of methanocaldococcus jannaschii two-subunit fumarate hydratase apo-protein complex 0.9247 4 281
7xky-assembly1.cif.gz_A crystal structure of methanocaldococcus jannaschii two-subunit fumarate hydratase apo-protein complex 0.9059 4 281
6unz-assembly1.cif.gz_A crystal structure of cytosolic fumarate hydratase from leishmania major 0.8382 4 285
6upo-assembly1.cif.gz_B crystal structure of h334a variant of cytosolic fumarate hydratase from leishmania major in a complex with s-malate 0.8273 3 285
6uqn-assembly1.cif.gz_B crystal structure of r173a variant of cytosolic fumarate hydratase from leishmania major in a complex with fumarate and s-malate 0.8198 4 292
ID Description Score Start End Superfamily
1w5fB02 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Tubulin/FtsZ, C-terminal domain 0.6419 63 130 3.30.1330.20
af_Q09773_1337_1451_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.5853 62 96 3.30.300.30
af_Q4E674_25_205_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.5757 4 58 1.20.1260.10
1ofuB02 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Tubulin/FtsZ, C-terminal domain 0.5714 63 140 3.30.1330.20
af_Q58039_249_363_3.30.1330.20 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Tubulin/FtsZ, C-terminal domain 0.5556 63 142 3.30.1330.20
ID Description Score Start End GO Terms
AF-T0DPB1-F1-model_v4 Fumarate hydratase 0.9802 4 293 GO:0016829
GO:0046872
GO:0051539
AF-A0A1F3X989-F1-model_v4 Fe-S hydro-lyase tartrate dehydratase alpha-type catalytic domain-containing protein 0.9794 4 293 GO:0016829
GO:0046872
GO:0051539
AF-A0A7V4J138-F1-model_v4 Fumarate hydratase 0.979 4 293 GO:0016829
GO:0046872
GO:0051539
AF-T0RJG6-F1-model_v4 Fumarate hydratase I 0.9784 1 293 GO:0016829
GO:0046872
GO:0051539
AF-A0A3N5KFQ7-F1-model_v4 Fumarate hydratase 0.9772 4 293 GO:0016829
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
92.22 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map