F355316

General Info

Members Datasets Scaffolds Average Seq Length
243 188 486 225

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10295901|Ga0070666_102959012
Length 248
Sequence MRYLGSYRLSSVVLFQLIKQMPTIVFANPKGGAGKSTAAVILATQLGRRGAKVTILDADPNKPVSEWAKRGTPENLVVVADISETTIIDEIDAAAEKTPFVIVDLEGTASMMVAYAISRADLVIIPTQASQLDAKQAAKAVMLIKQQEKAFRKTIPFSILYTRTSSAIRTKTLSHVQNEFQKNNIPSFSTHLHEREAFRALFSFGGSLETLDPRQVGGLENAIANARQYAAEFVHMIQLTGEGVAVHG

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
10 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
12 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
13 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
14 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
15 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
16 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
40 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
44 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
52 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
97 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
98 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
99 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
148 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
149 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
157 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
158 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
159 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
160 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
161 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
167 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
179 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
180 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
183 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
184 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
185 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
186 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
187 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
188 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.3
Metatranscriptomes 2.47
Isolates 1.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.47
Nodule 0
Rhizoplane 0.41
Rhizosphere 80.25
Stem 0
Stem Tuber 0
Unclassified 16.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10295901 3300005335 Unclassified 1152
2 JGI25155J39150_1001057 3300002704 Bacteria 2850
3 JGI25156J39149_1005386 3300002705 Bacteria 3698
4 JGI25154J39366_1001156 3300002738 Bacteria 10185
5 Ga0006778J45830_1024280 3300003162 Bacteria 1434
6 Ga0006777J48905_1016110 3300003308 Bacteria 1400
7 rootH2_10006851 3300003320 Bacteria 28511
8 rootH2_10206463 3300003320 Bacteria 7925
9 Ga0007417J51691_1014432 3300003544 Bacteria 1439
10 Ga0007410J51695_1027315 3300003574 Bacteria 1180
11 Ga0032354_1013873 3300003693 Bacteria 1480
12 Ga0055538_1000704 3300003751 Bacteria 10185
13 Ga0055539_1000586 3300003752 Bacteria 10185
14 Ga0055533_1000769 3300003756 Bacteria 10185
15 Ga0055532_1000865 3300003758 Bacteria 10185
16 Ga0055525_1000785 3300003759 Bacteria 10185
17 Ga0055541_1000549 3300003841 Bacteria 10185
18 Ga0070683_100014162 3300005329 Bacteria 6967
19 Ga0070671_100029246 3300005355 Bacteria 4543
20 Ga0068853_100002782 3300005539 Bacteria 13227
21 Ga0068853_100353006 3300005539 Unclassified 1368
22 Ga0070665_100444201 3300005548 Bacteria 1306
23 Ga0068857_100000856 3300005577 Bacteria 22822
24 Ga0068856_100292999 3300005614 Bacteria 1644
25 Ga0068859_100569082 3300005617 Unclassified 1227
26 Ga0068864_100085840 3300005618 Plasmid 2768
27 Ga0068862_100001662 3300005844 Bacteria 20203
28 Ga0070717_10122405 3300006028 Bacteria 2230
29 Ga0070717_10159810 3300006028 Bacteria 1954
30 Ga0097621_100016143 3300006237 Bacteria 5638
31 Ga0097621_100489299 3300006237 Bacteria 1113
32 Ga0068871_100259259 3300006358 Unclassified 1516
33 Ga0097620_100569070 3300006931 Unclassified 1227
34 Ga0105240_10027816 3300009093 Bacteria 7399
35 Ga0105245_10171464 3300009098 Unclassified 2067
36 Ga0105245_11072114 3300009098 Unclassified 851
37 Ga0105248_10009457 3300009177 Bacteria 10730
38 Ga0105238_10064161 3300009551 Bacteria 3673
39 Ga0105238_10290586 3300009551 Bacteria 1617
40 Ga0105239_11175420 3300010375 Bacteria 884
41 Ga0163162_10370680 3300013306 Bacteria 1565
42 Ga0163163_10302308 3300014325 Unclassified 1652
43 Ga0157379_10785285 3300014968 Bacteria 898
44 Ga0157376_10336713 3300014969 Unclassified 1440
45 Ga0182005_1004678 3300015265 Bacteria 4373
46 Ga0213874_10005887 3300021377 Bacteria 2878
47 Ga0213876_10094160 3300021384 Unclassified 1587
48 Ga0213875_10111177 3300021388 Unclassified 1279
49 Ga0209435_100364 3300025206 Bacteria 10237
50 Ga0209784_100608 3300025224 Bacteria 11510
51 Ga0209566_101042 3300025225 Bacteria 11510
52 Ga0209674_100707 3300025226 Bacteria 11510
53 Ga0209147_101225 3300025229 Bacteria 10237
54 Ga0209563_100620 3300025230 Bacteria 11510
55 Ga0209437_100971 3300025233 Bacteria 10217
56 Ga0209258_101102 3300025242 Bacteria 11479
57 Ga0209646_1000737 3300025246 Bacteria 11510
58 Ga0209677_101242 3300025253 Bacteria 11510
59 Ga0209759_1001684 3300025256 Bacteria 11506
60 Ga0209025_1019041 3300025294 Bacteria 3841
61 Ga0209257_1012606 3300025304 Bacteria 3881
62 Ga0207695_10306924 3300025913 Unclassified 1477
63 Ga0207694_10332929 3300025924 Bacteria 1255
64 Ga0207687_10477522 3300025927 Unclassified 1038
65 Ga0207687_10637813 3300025927 Unclassified 900
66 Ga0207644_10009000 3300025931 Bacteria 6544
67 Ga0207686_10313084 3300025934 Unclassified 1170
68 Ga0207711_10041271 3300025941 Plasmid 3929
69 Ga0207661_10009489 3300025944 Bacteria 6982
70 Ga0207639_10323743 3300026041 Unclassified 1370
71 Ga0207674_10001997 3300026116 Bacteria 25875
72 Ga0268266_10357171 3300028379 Bacteria 1374
73 Ga0265332_10000355 3300031238 Bacteria 34319
74 Ga0265328_10011627 3300031239 Bacteria 3512
75 Ga0265340_10145494 3300031247 Bacteria 1082
76 Ga0265339_10095154 3300031249 Bacteria 1556
77 Ga0265339_10108574 3300031249 Bacteria 1438
78 Ga0265331_10008053 3300031250 Bacteria 6023
79 Ga0265316_10010065 3300031344 Bacteria 8647
80 Ga0307408_100000535 3300031548 Bacteria 32791
81 Ga0265314_10001166 3300031711 Bacteria 30241
82 Ga0265314_10170397 3300031711 Unclassified 1315
83 Ga0265342_10001928 3300031712 Bacteria 18614
84 Ga0316576_10131253 3300031727 Unclassified 1885
85 Ga0316578_10093323 3300031728 Unclassified 1800
86 Ga0307405_10000405 3300031731 Bacteria 16181
87 Ga0307412_10000520 3300031911 Bacteria 22977
88 Ga0307409_100462070 3300031995 Bacteria 1227
89 Ga0307416_100002462 3300032002 Bacteria 10642
90 Ga0307411_10033640 3300032005 Bacteria 3181
91 Ga0316592_1057099 3300033524 Unclassified 874
92 Ga0373927_0181101 3300035695 Bacteria 1382
93 Ga0373937_0000779 3300036401 Bacteria 27436
94 Ga0373937_0222512 3300036401 Bacteria 1777
95 Ga0373937_0381484 3300036401 Bacteria 1337
96 Ga0373937_0600185 3300036401 Bacteria 1045
97 Ga0316584_0211476 3300036712 Unclassified 1427
98 Ga0373925_0277145 3300037068 Bacteria 1350
99 Ga0395899_0001328 3300037312 Bacteria 21239
100 Ga0395900_0002295 3300037418 Bacteria 21239
101 Ga0395898_0002573 3300037466 Bacteria 21239
102 Ga0395905_0002326 3300037471 Bacteria 21239
103 Ga0395905_0011912 3300037471 Bacteria 8385
104 Ga0395905_0032703 3300037471 Bacteria 4890
105 Ga0436364_0086193 3300037853 Plasmid 3250
106 Ga0436364_0229285 3300037853 Unclassified 1728
107 Ga0436364_0341858 3300037853 Bacteria 1178
108 Ga0395901_0001951 3300038443 Bacteria 21239
109 Ga0400483_135592 3300039062 Plasmid 2884
110 Ga0436365_1896257 3300039437 Unclassified 1633
111 Ga0436361_0644991 3300039447 Bacteria 1223
112 Ga0436361_0652167 3300039447 Unclassified 1071
113 Ga0436361_1019639 3300039447 Bacteria 2212
114 Ga0436363_0237841 3300039450 Unclassified 2497
115 Ga0436363_0244666 3300039450 Bacteria 857
116 Ga0436363_1633697 3300039450 Bacteria 2774
117 Ga0439438_001204 3300041405 Bacteria 11480
118 Ga0439450_075433 3300042008 Unclassified 833
119 Ga0466969_0008753 3300044656 Bacteria 5364
120 Ga0466969_0012076 3300044656 Bacteria 4564
121 Ga0466966_0000370 3300044684 Bacteria 29301
122 Ga0466966_0123464 3300044684 Bacteria 1589
123 Ga0466961_0011392 3300044693 Bacteria 5688
124 Ga0466971_0001187 3300044719 Bacteria 10814
125 Ga0466970_0011648 3300044765 Bacteria 4486
126 Ga0466959_0000119 3300045049 Bacteria 50790
127 Ga0466958_0038867 3300045836 Bacteria 2856
128 Ga0466967_1098018 3300045976 Bacteria 793
129 Ga0495592_0021637 3300046454 Bacteria 4891
130 Ga0495603_0070632 3300046455 Unclassified 2052
131 Ga0495603_0191966 3300046455 Unclassified 1181
132 Ga0495590_0032542 3300046457 Unclassified 1824
133 Ga0495651_0355016 3300046462 Bacteria 968
134 Ga0495653_0000276 3300046463 Bacteria 41677
135 Ga0495653_0018080 3300046463 Bacteria 5731
136 Ga0495653_0025530 3300046463 Bacteria 4745
137 Ga0495650_0004124 3300046471 Bacteria 10122
138 Ga0495580_0001938 3300046472 Bacteria 18188
139 Ga0495582_0130826 3300046473 Unclassified 1418
140 Ga0495664_0041417 3300046477 Bacteria 2725
141 Ga0495664_0084194 3300046477 Bacteria 1908
142 Ga0495584_0000272 3300046491 Bacteria 36607
143 Ga0495585_0000098 3300046492 Bacteria 92935
144 Ga0495594_0001042 3300046499 Bacteria 14440
145 Ga0495594_0001572 3300046499 Bacteria 11859
146 Ga0495596_0021328 3300046500 Bacteria 2645
147 Ga0495607_0027453 3300046501 Plasmid 3519
148 Ga0495606_0001552 3300046507 Bacteria 30256
149 Ga0495606_0001944 3300046507 Bacteria 25548
150 Ga0495606_0003835 3300046507 Bacteria 15553
151 Ga0495610_0000145 3300046512 Bacteria 78100
152 Ga0495618_0048132 3300046514 Plasmid 2691
153 Ga0495628_0221761 3300046516 Bacteria 1420
154 Ga0495628_0227000 3300046516 Bacteria 1401
155 Ga0495630_0021666 3300046517 Bacteria 4745
156 Ga0495630_0038790 3300046517 Bacteria 3563
157 Ga0495632_0000622 3300046519 Bacteria 32756
158 Ga0495648_0000397 3300046524 Bacteria 47805
159 Ga0495666_0139863 3300046526 Bacteria 1129
160 Ga0495652_0234480 3300046529 Bacteria 1370
161 Ga0495665_0028160 3300046531 Plasmid 3014
162 Ga0495640_0042256 3300046533 Bacteria 3182
163 Ga0495586_0017200 3300046535 Plasmid 3843
164 Ga0495586_0151361 3300046535 Unclassified 1305
165 Ga0495586_0175359 3300046535 Bacteria 1212
166 Ga0495586_0331341 3300046535 Bacteria 873
167 Ga0495587_0000263 3300046536 Bacteria 37730
168 Ga0495645_0001273 3300046543 Bacteria 17169
169 Ga0495645_0011831 3300046543 Bacteria 6147
170 Ga0495645_0056205 3300046543 Bacteria 2857
171 Ga0495622_0019658 3300046557 Bacteria 3144
172 Ga0495622_0019929 3300046557 Unclassified 3122
173 Ga0495633_0126479 3300046558 Bacteria 1183
174 Ga0495633_0127991 3300046558 Bacteria 1175
175 Ga0495667_0211787 3300046559 Bacteria 1238
176 Ga0495668_0003248 3300046616 Bacteria 12356
177 Ga0495634_0018170 3300046642 Bacteria 5009
178 Ga0495634_0073128 3300046642 Bacteria 2254
179 Ga0495635_0020917 3300046663 Bacteria 4559
180 Ga0495661_0018535 3300046665 Plasmid 4576
181 Ga0495661_0025075 3300046665 Bacteria 3858
182 Ga0495661_0040857 3300046665 Plasmid 2873
183 Ga0495588_0000317 3300046674 Bacteria 32716
184 Ga0495599_0001347 3300046678 Bacteria 14011
185 Ga0495599_0347040 3300046678 Bacteria 890
186 Ga0495623_0173339 3300046679 Bacteria 1258
187 Ga0495646_0016167 3300046680 Bacteria 4736
188 Ga0495646_0038420 3300046680 Bacteria 2956
189 Ga0495658_0476282 3300046683 Bacteria 798
190 Ga0495613_0047727 3300046689 Bacteria 3163
191 Ga0495613_0216279 3300046689 Bacteria 1346
192 Ga0495624_0017902 3300046690 Bacteria 4745
193 Ga0495589_0000302 3300046794 Bacteria 39294
194 Ga0495589_0056610 3300046794 Bacteria 1930
195 Ga0495600_0388500 3300046809 Bacteria 870
196 Ga0495581_0013622 3300047315 Bacteria 4716
197 Ga0495604_0430155 3300047317 Bacteria 865
198 Ga0495674_0009557 3300047319 Bacteria 9208
199 Ga0495674_0102663 3300047319 Bacteria 2432
200 Ga0495674_0358442 3300047319 Bacteria 1183
201 Ga0495680_0022681 3300047322 Bacteria 5230
202 Ga0495675_0016420 3300047444 Bacteria 4682
203 Ga0495675_0291518 3300047444 Bacteria 971
204 Ga0495679_000964 3300047446 Bacteria 17831
205 Ga0495685_047324 3300047447 Bacteria 1463
206 Ga0495673_0000230 3300047469 Bacteria 81377
207 Ga0495593_0013042 3300047673 Bacteria 4745
208 Ga0495602_0564515 3300048088 Bacteria 787
209 Ga0495614_0000040 3300048089 Bacteria 39350
210 Ga0495614_0029423 3300048089 Bacteria 2364
211 Ga0495614_0043992 3300048089 Bacteria 1915
212 Ga0496105_0486071 3300048908 Unclassified 971
213 Ga0496122_0085830 3300048925 Unclassified 2170
214 Ga0496124_0393022 3300048927 Unclassified 965
215 Ga0496126_0030934 3300048929 Bacteria 5065
216 Ga0495682_0038403 3300049460 Bacteria 1760
217 Ga0501032_0002252 3300049569 Bacteria 15176
218 Ga0501033_0761349 3300049570 Unclassified 656
219 Ga0501034_0001244 3300049571 Bacteria 34628
220 Ga0501034_0075638 3300049571 Bacteria 3374
221 Ga0501037_0291519 3300049573 Unclassified 1135
222 Ga0501038_0008910 3300049574 Bacteria 9208
223 Ga0501043_0033247 3300049579 Bacteria 4057
224 Ga0501073_0045177 3300049589 Bacteria 3103
225 Ga0501080_0068367 3300049742 Bacteria 3304
226 Ga0501080_0270972 3300049742 Bacteria 1545
227 Ga0501083_0333167 3300049744 Unclassified 987
228 Ga0501044_0260702 3300049823 Bacteria 1672
229 Ga0501044_0283806 3300049823 Unclassified 1588
230 Ga0501044_0320948 3300049823 Bacteria 1473
231 Ga0501044_1107956 3300049823 Bacteria 661
232 Ga0495601_0028523 3300053077 Bacteria 3458
233 Ga0500635_0000340 3300053080 Bacteria 15517
234 Ga0500654_121561 3300053099 Unclassified 1025
235 Ga0500608_000029 3300053122 Bacteria 66850
236 Ga0500568_0023695 3300053139 Bacteria 2609
237 Ga0500604_0015849 3300053151 Bacteria 2069
238 Ga0500624_000174 3300053157 Bacteria 25555
239 Ga0500661_000653 3300055283 Bacteria 6473
240 Ga0466962_0000208 3300061719 Bacteria 24498
241 2739794004 2739367756 Bacteria 4553612
242 2821450322 2821443989 Bacteria 7658172
243 2919108331 2919100787 Bacteria 7710546
244 Ga0070666_10295901
245 JGI25155J39150_1001057
246 JGI25156J39149_1005386
247 JGI25154J39366_1001156
248 Ga0006778J45830_1024280
249 Ga0006777J48905_1016110
250 rootH2_10006851
251 rootH2_10206463
252 Ga0007417J51691_1014432
253 Ga0007410J51695_1027315
254 Ga0032354_1013873
255 Ga0055538_1000704
256 Ga0055539_1000586
257 Ga0055533_1000769
258 Ga0055532_1000865
259 Ga0055525_1000785
260 Ga0055541_1000549
261 Ga0070683_100014162
262 Ga0070671_100029246
263 Ga0068853_100002782
264 Ga0068853_100353006
265 Ga0070665_100444201
266 Ga0068857_100000856
267 Ga0068856_100292999
268 Ga0068859_100569082
269 Ga0068864_100085840
270 Ga0068862_100001662
271 Ga0070717_10122405
272 Ga0070717_10159810
273 Ga0097621_100016143
274 Ga0097621_100489299
275 Ga0068871_100259259
276 Ga0097620_100569070
277 Ga0105240_10027816
278 Ga0105245_10171464
279 Ga0105245_11072114
280 Ga0105248_10009457
281 Ga0105238_10064161
282 Ga0105238_10290586
283 Ga0105239_11175420
284 Ga0163162_10370680
285 Ga0163163_10302308
286 Ga0157379_10785285
287 Ga0157376_10336713
288 Ga0182005_1004678
289 Ga0213874_10005887
290 Ga0213876_10094160
291 Ga0213875_10111177
292 Ga0209435_100364
293 Ga0209784_100608
294 Ga0209566_101042
295 Ga0209674_100707
296 Ga0209147_101225
297 Ga0209563_100620
298 Ga0209437_100971
299 Ga0209258_101102
300 Ga0209646_1000737
301 Ga0209677_101242
302 Ga0209759_1001684
303 Ga0209025_1019041
304 Ga0209257_1012606
305 Ga0207695_10306924
306 Ga0207694_10332929
307 Ga0207687_10477522
308 Ga0207687_10637813
309 Ga0207644_10009000
310 Ga0207686_10313084
311 Ga0207711_10041271
312 Ga0207661_10009489
313 Ga0207639_10323743
314 Ga0207674_10001997
315 Ga0268266_10357171
316 Ga0265332_10000355
317 Ga0265328_10011627
318 Ga0265340_10145494
319 Ga0265339_10095154
320 Ga0265339_10108574
321 Ga0265331_10008053
322 Ga0265316_10010065
323 Ga0307408_100000535
324 Ga0265314_10001166
325 Ga0265314_10170397
326 Ga0265342_10001928
327 Ga0316576_10131253
328 Ga0316578_10093323
329 Ga0307405_10000405
330 Ga0307412_10000520
331 Ga0307409_100462070
332 Ga0307416_100002462
333 Ga0307411_10033640
334 Ga0316592_1057099
335 Ga0373927_0181101
336 Ga0373937_0000779
337 Ga0373937_0222512
338 Ga0373937_0381484
339 Ga0373937_0600185
340 Ga0316584_0211476
341 Ga0373925_0277145
342 Ga0395899_0001328
343 Ga0395900_0002295
344 Ga0395898_0002573
345 Ga0395905_0002326
346 Ga0395905_0011912
347 Ga0395905_0032703
348 Ga0436364_0086193
349 Ga0436364_0229285
350 Ga0436364_0341858
351 Ga0395901_0001951
352 Ga0400483_135592
353 Ga0436365_1896257
354 Ga0436361_0644991
355 Ga0436361_0652167
356 Ga0436361_1019639
357 Ga0436363_0237841
358 Ga0436363_0244666
359 Ga0436363_1633697
360 Ga0439438_001204
361 Ga0439450_075433
362 Ga0466969_0008753
363 Ga0466969_0012076
364 Ga0466966_0000370
365 Ga0466966_0123464
366 Ga0466961_0011392
367 Ga0466971_0001187
368 Ga0466970_0011648
369 Ga0466959_0000119
370 Ga0466958_0038867
371 Ga0466967_1098018
372 Ga0495592_0021637
373 Ga0495603_0070632
374 Ga0495603_0191966
375 Ga0495590_0032542
376 Ga0495651_0355016
377 Ga0495653_0000276
378 Ga0495653_0018080
379 Ga0495653_0025530
380 Ga0495650_0004124
381 Ga0495580_0001938
382 Ga0495582_0130826
383 Ga0495664_0041417
384 Ga0495664_0084194
385 Ga0495584_0000272
386 Ga0495585_0000098
387 Ga0495594_0001042
388 Ga0495594_0001572
389 Ga0495596_0021328
390 Ga0495607_0027453
391 Ga0495606_0001552
392 Ga0495606_0001944
393 Ga0495606_0003835
394 Ga0495610_0000145
395 Ga0495618_0048132
396 Ga0495628_0221761
397 Ga0495628_0227000
398 Ga0495630_0021666
399 Ga0495630_0038790
400 Ga0495632_0000622
401 Ga0495648_0000397
402 Ga0495666_0139863
403 Ga0495652_0234480
404 Ga0495665_0028160
405 Ga0495640_0042256
406 Ga0495586_0017200
407 Ga0495586_0151361
408 Ga0495586_0175359
409 Ga0495586_0331341
410 Ga0495587_0000263
411 Ga0495645_0001273
412 Ga0495645_0011831
413 Ga0495645_0056205
414 Ga0495622_0019658
415 Ga0495622_0019929
416 Ga0495633_0126479
417 Ga0495633_0127991
418 Ga0495667_0211787
419 Ga0495668_0003248
420 Ga0495634_0018170
421 Ga0495634_0073128
422 Ga0495635_0020917
423 Ga0495661_0018535
424 Ga0495661_0025075
425 Ga0495661_0040857
426 Ga0495588_0000317
427 Ga0495599_0001347
428 Ga0495599_0347040
429 Ga0495623_0173339
430 Ga0495646_0016167
431 Ga0495646_0038420
432 Ga0495658_0476282
433 Ga0495613_0047727
434 Ga0495613_0216279
435 Ga0495624_0017902
436 Ga0495589_0000302
437 Ga0495589_0056610
438 Ga0495600_0388500
439 Ga0495581_0013622
440 Ga0495604_0430155
441 Ga0495674_0009557
442 Ga0495674_0102663
443 Ga0495674_0358442
444 Ga0495680_0022681
445 Ga0495675_0016420
446 Ga0495675_0291518
447 Ga0495679_000964
448 Ga0495685_047324
449 Ga0495673_0000230
450 Ga0495593_0013042
451 Ga0495602_0564515
452 Ga0495614_0000040
453 Ga0495614_0029423
454 Ga0495614_0043992
455 Ga0496105_0486071
456 Ga0496122_0085830
457 Ga0496124_0393022
458 Ga0496126_0030934
459 Ga0495682_0038403
460 Ga0501032_0002252
461 Ga0501033_0761349
462 Ga0501034_0001244
463 Ga0501034_0075638
464 Ga0501037_0291519
465 Ga0501038_0008910
466 Ga0501043_0033247
467 Ga0501073_0045177
468 Ga0501080_0068367
469 Ga0501080_0270972
470 Ga0501083_0333167
471 Ga0501044_0260702
472 Ga0501044_0283806
473 Ga0501044_0320948
474 Ga0501044_1107956
475 Ga0495601_0028523
476 Ga0500635_0000340
477 Ga0500654_121561
478 Ga0500608_000029
479 Ga0500568_0023695
480 Ga0500604_0015849
481 Ga0500624_000174
482 Ga0500661_000653
483 Ga0466962_0000208
484 2739794004
485 2821450322
486 2919108331

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09140

MipZ

ATPase MipZ

22

68

0.94

PF10609

ParA

NUBPL iron-transfer P-loop NTPase

19

63

0.93

PF13614

AAA_31

AAA domain

21

80

0.91

PF07015

VirC1

VirC1 protein

21

216

0.89

PF01656

CbiA

CobQ/CobB/MinD/ParA nucleotide binding domain

24

208

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dzz-assembly3.cif.gz_A structure of parf-adp, crystal form 1 0.915 1 224
4dzz-assembly3.cif.gz_A structure of parf-adp, crystal form 1 0.9108 1 224
4e09-assembly1.cif.gz_A-2 structure of parf-amppcp, i422 form 0.9063 1 224
4e09-assembly1.cif.gz_A-2 structure of parf-amppcp, i422 form 0.9021 1 224
4e07-assembly3.cif.gz_A parf-amppcp-c2221 form 0.8926 1 222
ID Description Score Start End Superfamily
4e07A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8926 1 222 3.40.50.300
4e07A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8804 1 222 3.40.50.300
3cwqB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8344 3 225 3.40.50.300
3cwqB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8228 3 225 3.40.50.300
af_P9WLT1_58_317_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7977 2 222 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3M3AHV1-F1-model_v4 Stability/partitioning determinant 0.9845 1 223
AF-A0A7W5QLY6-F1-model_v4 Chromosome partitioning protein 0.977 1 224
AF-A0A643G0D2-F1-model_v4 ParA family protein 0.9765 1 224
AF-A0A258BMC1-F1-model_v4 Chromosome partitioning protein ParA 0.9752 1 118
AF-A0A542LGH8-F1-model_v4 Cellulose biosynthesis protein BcsQ 0.9736 1 151

Map