F355303

General Info

Members Datasets Scaffolds Average Seq Length
243 158 238 605

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100000018|Ga0070670_100000018168
Length 651
Sequence LSTQDARLAAQWLPGKLAPFSRWCRPLSPSSPSNTVILGLSAYYHDSAAALVRAGEIVAAAQEERFTRKKHDAAFPANAIAYCLEEARLTLADVDYVVFYDKPLIKFERLLETYLTYAPKGVRSFLAAMPVWLKEKLYLKATLKKELAALGGLSEKQLPQLLFTEHHQAHAASAFFPSPFQNAAVMCLDGVGEWATSSVWLGEGNKLTPQWEIDFPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPKFVDIILNNLIDIKDDGTFRLDMRYFNYATGLTMTNDKFAELFGGPARKPESPLTQREMDIAASIQVVTEEIVLKLARTVQRELKQDYLCLAGGVALNCVANGRLLREGIFKDVWIQPAAGDAGGALGAALAIWHEYLGNARTAPDQTCSVGDRMRGSYLGPWFGSDNICGYLDTIKAPYKKLDDAEFYNELSDVLAAEKVVGWFQGRMEFGPRALGGRSIIGDPRSAKMQSVMNLKIKYRESFRPFAPAIKAERVSEWFVHDRSSPYMLMVAPVREDKRIAMTAEQQQLFGIEKLLVPRSQIPAVTHVDYSARIQTVHADTNPRFYQLLDHFEQKTGCPVLVNTSFNVRGEPIVCTPEDAYRCFMRTEMDCLVLENVVLHKHEQPVWEEQDDWQNEFELD

Samples

Sample ID Description Type Environment
1 2643221556 Massilia sp. Root1485 Isolate Unclassified
2 2643221684 Massilia sp. Root133 Isolate Unclassified
3 2643221717 Acidovorax sp. Root267 Isolate Unclassified
4 2738541278 Niastella sp. CF465 Isolate Unclassified
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
59 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
66 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
74 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
75 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
76 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
82 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
86 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
89 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
90 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
91 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
92 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
93 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
94 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
95 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
96 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
101 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
106 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
107 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
108 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
118 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
125 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
129 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
130 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.53
Metatranscriptomes 0.41
Isolates 2.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.65
Nodule 0
Rhizoplane 2.06
Rhizosphere 89.71
Stem 0
Stem Tuber 0
Unclassified 6.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055525_1000105 3300003759 Bacteria 134026
2 Ga0070658_10030572 3300005327 Bacteria 4326
3 Ga0070658_10067440 3300005327 Bacteria 2923
4 Ga0070676_10019788 3300005328 Bacteria 3750
5 Ga0070670_100000018 3300005331 Bacteria 221691
6 Ga0070666_10008217 3300005335 Bacteria 6469
7 Ga0070660_100029607 3300005339 Bacteria 4105
8 Ga0070661_100014331 3300005344 Bacteria 5584
9 Ga0070675_100128974 3300005354 Bacteria 2154
10 Ga0070671_100000084 3300005355 Bacteria 59737
11 Ga0070671_100023027 3300005355 Bacteria 5091
12 Ga0070659_100008588 3300005366 Bacteria 7468
13 Ga0070667_100000002 3300005367 Bacteria 504831
14 Ga0070713_100047532 3300005436 Bacteria 3528
15 Ga0070685_10000003 3300005466 Bacteria 283138
16 Ga0070685_10017099 3300005466 Bacteria 3876
17 Ga0070707_100113366 3300005468 Bacteria 2631
18 Ga0070665_100001280 3300005548 Bacteria 30114
19 Ga0068855_100014615 3300005563 Bacteria 9453
20 Ga0068855_100016288 3300005563 Bacteria 8940
21 Ga0070664_100033091 3300005564 Bacteria 4327
22 Ga0068864_100000002 3300005618 Bacteria 658857
23 Ga0068860_100000499 3300005843 Bacteria 48692
24 Ga0081540_1023954 3300005983 Bacteria 3554
25 Ga0070716_100054572 3300006173 Bacteria 2283
26 Ga0075428_100005135 3300006844 Bacteria 14555
27 Ga0075428_100016907 3300006844 Bacteria 8056
28 Ga0099794_10000035 3300007265 Bacteria 56711
29 Ga0105240_10000533 3300009093 Bacteria 70305
30 Ga0105240_10002479 3300009093 Bacteria 29666
31 Ga0105240_10089346 3300009093 Bacteria 3768
32 Ga0105240_10154279 3300009093 Bacteria 2733
33 Ga0105242_10000464 3300009176 Bacteria 32271
34 Ga0105249_10013365 3300009553 Bacteria 7249
35 Ga0105239_10001651 3300010375 Bacteria 29415
36 Ga0105239_10185661 3300010375 Bacteria 2327
37 Ga0157374_10001631 3300013296 Bacteria 18778
38 Ga0163163_10001034 3300014325 Bacteria 23573
39 Ga0157380_10008975 3300014326 Bacteria 7143
40 Ga0209563_100007 3300025230 Bacteria 1579402
41 Ga0209148_1000476 3300025254 Bacteria 42273
42 Ga0207710_10006642 3300025900 Bacteria 4931
43 Ga0207645_10024856 3300025907 Bacteria 3881
44 Ga0207705_10006888 3300025909 Bacteria 8397
45 Ga0207695_10000632 3300025913 Bacteria 70471
46 Ga0207695_10002023 3300025913 Bacteria 31171
47 Ga0207695_10077642 3300025913 Bacteria 3372
48 Ga0207657_10056037 3300025919 Bacteria 3402
49 Ga0207649_10010477 3300025920 Bacteria 5095
50 Ga0207681_10000509 3300025923 Bacteria 27059
51 Ga0207650_10000002 3300025925 Bacteria 1439222
52 Ga0207700_10050788 3300025928 Bacteria 3092
53 Ga0207644_10001002 3300025931 Bacteria 18049
54 Ga0207644_10035454 3300025931 Bacteria 3496
55 Ga0207690_10008143 3300025932 Bacteria 6220
56 Ga0207690_10017092 3300025932 Bacteria 4424
57 Ga0207686_10000090 3300025934 Bacteria 74224
58 Ga0207711_10000765 3300025941 Bacteria 31593
59 Ga0207667_10012901 3300025949 Bacteria 9599
60 Ga0207667_10019261 3300025949 Bacteria 7628
61 Ga0207658_10000001 3300025986 Bacteria 1439333
62 Ga0207703_10039090 3300026035 Bacteria 3790
63 Ga0207676_10000001 3300026095 Bacteria 1439222
64 Ga0209588_1000005 3300027671 Bacteria 197989
65 Ga0268266_10000525 3300028379 Bacteria 53447
66 Ga0268266_10010019 3300028379 Bacteria 8316
67 Ga0268265_10000455 3300028380 Bacteria 43315
68 Ga0268264_10000004 3300028381 Bacteria 1116842
69 Ga0316177_1192577 3300030731 Bacteria 4758
70 Ga0316180_1019625 3300030736 Bacteria 6435
71 Ga0265327_10008811 3300031251 Bacteria 7439
72 Ga0316575_10000941 3300031665 Bacteria 8948
73 Ga0307409_100022400 3300031995 Bacteria 4356
74 Ga0307411_10004377 3300032005 Bacteria 6754
75 Ga0316593_10020185 3300032168 Bacteria 2068
76 Ga0316574_0000630 3300035398 Bacteria 14733
77 Ga0373927_0014320 3300035695 Bacteria 5252
78 Ga0316584_0012417 3300036712 Bacteria 6007
79 Ga0316584_0067314 3300036712 Bacteria 2684
80 Ga0395899_0000028 3300037312 Bacteria 334378
81 Ga0395900_0015061 3300037418 Bacteria 7883
82 Ga0395900_0053441 3300037418 Bacteria 4157
83 Ga0395898_0026568 3300037466 Bacteria 5822
84 Ga0395905_0011508 3300037471 Bacteria 8549
85 Ga0395905_0097218 3300037471 Bacteria 2764
86 Ga0395901_0015889 3300038443 Bacteria 7670
87 Ga0400484_09557 3300038725 Bacteria 3326
88 Ga0400484_09595 3300038725 Bacteria 5848
89 Ga0400484_38473 3300038725 Bacteria 6506
90 Ga0400483_175791 3300039062 Bacteria 16643
91 Ga0400487_37292 3300039110 Bacteria 11547
92 Ga0439448_0000170 3300042005 Bacteria 13099
93 Ga0466969_0015930 3300044656 Bacteria 3939
94 Ga0466965_0016521 3300044683 Bacteria 3514
95 Ga0466966_0001482 3300044684 Bacteria 15080
96 Ga0466966_0007293 3300044684 Bacteria 7326
97 Ga0466964_0007231 3300044706 Bacteria 4149
98 Ga0466964_0013996 3300044706 Bacteria 3047
99 Ga0466957_0007894 3300044842 Bacteria 6036
100 Ga0466957_0012826 3300044842 Bacteria 4856
101 Ga0466960_0009404 3300044901 Bacteria 4028
102 Ga0466959_0010381 3300045049 Bacteria 6654
103 Ga0466959_0023654 3300045049 Bacteria 4547
104 Ga0466967_0024012 3300045976 Bacteria 5006
105 Ga0495617_000209 3300046452 Bacteria 36150
106 Ga0495590_0002329 3300046457 Bacteria 7901
107 Ga0495653_0005273 3300046463 Bacteria 10519
108 Ga0495653_0030896 3300046463 Bacteria 4261
109 Ga0495605_0000217 3300046474 Bacteria 71011
110 Ga0495605_0006219 3300046474 Bacteria 6882
111 Ga0495605_0012178 3300046474 Bacteria 4777
112 Ga0495605_0013845 3300046474 Bacteria 4432
113 Ga0495584_0000008 3300046491 Bacteria 283067
114 Ga0495584_0000028 3300046491 Bacteria 111816
115 Ga0495584_0000342 3300046491 Bacteria 32246
116 Ga0495584_0003861 3300046491 Bacteria 8128
117 Ga0495584_0009017 3300046491 Bacteria 5153
118 Ga0495584_0018443 3300046491 Bacteria 3546
119 Ga0495584_0048141 3300046491 Bacteria 2150
120 Ga0495585_0000086 3300046492 Bacteria 97481
121 Ga0495585_0000139 3300046492 Bacteria 79372
122 Ga0495585_0000285 3300046492 Bacteria 50703
123 Ga0495585_0022530 3300046492 Bacteria 3615
124 Ga0495596_0000528 3300046500 Bacteria 24030
125 Ga0495596_0000958 3300046500 Bacteria 17231
126 Ga0495607_0001072 3300046501 Bacteria 24976
127 Ga0495607_0004925 3300046501 Bacteria 9708
128 Ga0495583_0000213 3300046506 Bacteria 97714
129 Ga0495583_0000466 3300046506 Bacteria 59826
130 Ga0495583_0010515 3300046506 Bacteria 5392
131 Ga0495583_0031672 3300046506 Bacteria 2561
132 Ga0495616_0000144 3300046513 Bacteria 62419
133 Ga0495616_0009061 3300046513 Bacteria 5840
134 Ga0495616_0011279 3300046513 Bacteria 5129
135 Ga0495616_0030902 3300046513 Bacteria 2809
136 Ga0495616_0035036 3300046513 Bacteria 2600
137 Ga0495616_0036336 3300046513 Bacteria 2542
138 Ga0495631_0001611 3300046518 Bacteria 13485
139 Ga0495632_0001162 3300046519 Bacteria 22411
140 Ga0495632_0006291 3300046519 Bacteria 7670
141 Ga0495643_0002351 3300046522 Bacteria 15168
142 Ga0495643_0003610 3300046522 Bacteria 11248
143 Ga0495644_0001450 3300046523 Bacteria 9683
144 Ga0495648_0000030 3300046524 Bacteria 216178
145 Ga0495648_0013668 3300046524 Bacteria 5987
146 Ga0495648_0024201 3300046524 Bacteria 4142
147 Ga0495663_0003870 3300046525 Bacteria 4266
148 Ga0495663_0004629 3300046525 Bacteria 3856
149 Ga0495642_0000432 3300046528 Bacteria 22120
150 Ga0495642_0007092 3300046528 Bacteria 4299
151 Ga0495652_0010387 3300046529 Bacteria 8439
152 Ga0495665_0008234 3300046531 Bacteria 5653
153 Ga0495586_0016694 3300046535 Bacteria 3904
154 Ga0495609_0000002 3300046538 Bacteria 739816
155 Ga0495597_0001302 3300046542 Bacteria 18321
156 Ga0495622_0022485 3300046557 Bacteria 2938
157 Ga0495633_0016795 3300046558 Bacteria 3760
158 Ga0495633_0032886 3300046558 Bacteria 2503
159 Ga0495668_0014622 3300046616 Bacteria 4597
160 Ga0495634_0051382 3300046642 Bacteria 2765
161 Ga0495611_0012156 3300046648 Bacteria 3658
162 Ga0495625_0037043 3300046660 Bacteria 3581
163 Ga0495661_0000717 3300046665 Bacteria 32619
164 Ga0495661_0001011 3300046665 Bacteria 25188
165 Ga0495661_0001138 3300046665 Bacteria 23241
166 Ga0495661_0001714 3300046665 Bacteria 17735
167 Ga0495661_0020674 3300046665 Bacteria 4294
168 Ga0495661_0022191 3300046665 Bacteria 4130
169 Ga0495661_0033893 3300046665 Bacteria 3217
170 Ga0495661_0040238 3300046665 Bacteria 2901
171 Ga0495588_0000067 3300046674 Bacteria 238958
172 Ga0495588_0020354 3300046674 Bacteria 3260
173 Ga0495669_0000177 3300046684 Bacteria 40130
174 Ga0495669_0004328 3300046684 Bacteria 5859
175 Ga0495670_0000126 3300046691 Bacteria 33072
176 Ga0495671_0032631 3300046692 Bacteria 2658
177 Ga0495589_0000009 3300046794 Bacteria 256265
178 Ga0495589_0000256 3300046794 Bacteria 43404
179 Ga0495589_0000501 3300046794 Bacteria 27708
180 Ga0495589_0004191 3300046794 Bacteria 7713
181 Ga0495589_0017558 3300046794 Bacteria 3671
182 Ga0495660_0000026 3300046810 Bacteria 256223
183 Ga0495604_0014381 3300047317 Bacteria 6312
184 Ga0495604_0041601 3300047317 Bacteria 3604
185 Ga0495674_0002230 3300047319 Bacteria 19056
186 Ga0495672_0000352 3300047320 Bacteria 58759
187 Ga0495672_0000886 3300047320 Bacteria 31476
188 Ga0495672_0004304 3300047320 Bacteria 11732
189 Ga0495676_0000037 3300047321 Bacteria 115856
190 Ga0495680_0008176 3300047322 Bacteria 9538
191 Ga0495683_0000076 3300047323 Bacteria 97809
192 Ga0495683_0004751 3300047323 Bacteria 7634
193 Ga0495687_000013 3300047443 Bacteria 371058
194 Ga0495687_000064 3300047443 Bacteria 163468
195 Ga0495687_000116 3300047443 Bacteria 122687
196 Ga0495687_000162 3300047443 Bacteria 100599
197 Ga0495687_000593 3300047443 Bacteria 42252
198 Ga0495675_0010534 3300047444 Bacteria 5779
199 Ga0495675_0022782 3300047444 Bacteria 3993
200 Ga0495677_0000142 3300047445 Bacteria 34317
201 Ga0495677_0001295 3300047445 Bacteria 9992
202 Ga0495677_0003269 3300047445 Bacteria 6317
203 Ga0495677_0004086 3300047445 Bacteria 5636
204 Ga0495681_0009044 3300047470 Bacteria 6175
205 Ga0495681_0027657 3300047470 Bacteria 2930
206 Ga0495626_0000786 3300048091 Bacteria 28839
207 Ga0495626_0002070 3300048091 Bacteria 14626
208 Ga0495626_0006363 3300048091 Bacteria 6731
209 Ga0496102_0000302 3300048905 Bacteria 62812
210 Ga0496107_0063717 3300048910 Bacteria 2672
211 Ga0496113_0001323 3300048916 Bacteria 13698
212 Ga0496114_0003073 3300048917 Bacteria 12794
213 Ga0496115_0079666 3300048918 Bacteria 2666
214 Ga0496122_0000248 3300048925 Bacteria 121158
215 Ga0496122_0002307 3300048925 Bacteria 27528
216 Ga0496122_0008689 3300048925 Bacteria 10884
217 Ga0496123_0000122 3300048926 Bacteria 158966
218 Ga0496123_0006928 3300048926 Bacteria 10830
219 Ga0496124_0071554 3300048927 Bacteria 2874
220 Ga0496125_0001501 3300048928 Bacteria 33413
221 Ga0495678_009165 3300049459 Bacteria 4925
222 Ga0501031_0000168 3300049568 Bacteria 37163
223 Ga0501034_0000098 3300049571 Bacteria 160770
224 Ga0501037_0002822 3300049573 Bacteria 12597
225 Ga0501039_0004357 3300049575 Bacteria 10670
226 Ga0501046_0001242 3300049580 Bacteria 24678
227 Ga0501072_0019436 3300049588 Bacteria 5251
228 Ga0501075_0000412 3300049591 Bacteria 24967
229 Ga0501077_0000765 3300049593 Bacteria 19411
230 Ga0501223_001195 3300049663 Bacteria 6087
231 Ga0501080_0001638 3300049742 Bacteria 19048
232 Ga0501035_0024772 3300049822 Bacteria 5501
233 Ga0501044_0002192 3300049823 Bacteria 22408
234 nmdc:mga05p37_134729_c1 3300050507 Bacteria 3030
235 nmdc:mga06r32_79125_c1 3300050510 Bacteria 3197
236 nmdc:mga08y16_23063_c1 3300050511 Bacteria 6571
237 Ga0500650_0000108 3300053098 Bacteria 22785
238 Ga0501082_0000109 3300060353 Bacteria 64214

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048927 Ga0496124_0071554 Ga0496124_0071554_1304_2854 516
2 3300049568 Ga0501031_0000168 Ga0501031_0000168_2021_3742 532
3 3300049573 Ga0501037_0002822 Ga0501037_0002822_8669_10390 532
4 3300049575 Ga0501039_0004357 Ga0501039_0004357_2149_3870 532
5 3300049580 Ga0501046_0001242 Ga0501046_0001242_3866_5587 532
6 3300046474 Ga0495605_0012178 Ga0495605_0012178_29_1660 538
7 3300037312 Ga0395899_0000028 Ga0395899_0000028_176357_178075 539
8 3300046491 Ga0495584_0000028 Ga0495584_0000028_33518_35263 542
9 3300046491 Ga0495584_0048141 Ga0495584_0048141_143_1879 542
10 3300046492 Ga0495585_0000086 Ga0495585_0000086_11888_13633 542
11 3300046492 Ga0495585_0022530 Ga0495585_0022530_1073_2809 542
12 3300046500 Ga0495596_0000528 Ga0495596_0000528_7927_9663 542
13 3300046513 Ga0495616_0009061 Ga0495616_0009061_2537_4273 542
14 3300046513 Ga0495616_0030902 Ga0495616_0030902_492_2237 542
15 3300046524 Ga0495648_0013668 Ga0495648_0013668_2047_3789 542
16 3300046525 Ga0495663_0004629 Ga0495663_0004629_1239_2975 542
17 3300046558 Ga0495633_0016795 Ga0495633_0016795_622_2367 542
18 3300046616 Ga0495668_0014622 Ga0495668_0014622_1453_3198 542
19 3300046648 Ga0495611_0012156 Ga0495611_0012156_1268_3004 542
20 3300046665 Ga0495661_0040238 Ga0495661_0040238_794_2530 542
21 3300046794 Ga0495589_0004191 Ga0495589_0004191_4460_6196 542
22 3300047320 Ga0495672_0000352 Ga0495672_0000352_4846_6627 542
23 3300047323 Ga0495683_0000076 Ga0495683_0000076_11852_13597 542
24 3300047445 Ga0495677_0001295 Ga0495677_0001295_405_2141 542
25 3300047470 Ga0495681_0027657 Ga0495681_0027657_836_2572 542
26 3300046452 Ga0495617_000209 Ga0495617_000209_31020_32759 543
27 3300046491 Ga0495584_0000008 Ga0495584_0000008_14279_16018 543
28 3300046491 Ga0495584_0003861 Ga0495584_0003861_2490_4229 543
29 3300046492 Ga0495585_0000139 Ga0495585_0000139_21959_23698 543
30 3300046492 Ga0495585_0000285 Ga0495585_0000285_39089_40828 543
31 3300046506 Ga0495583_0010515 Ga0495583_0010515_3094_4833 543
32 3300046513 Ga0495616_0000144 Ga0495616_0000144_46880_48619 543
33 3300046524 Ga0495648_0000030 Ga0495648_0000030_182951_184690 543
34 3300046558 Ga0495633_0032886 Ga0495633_0032886_73_1812 543
35 3300046665 Ga0495661_0001714 Ga0495661_0001714_14000_15736 543
36 3300046691 Ga0495670_0000126 Ga0495670_0000126_22348_24087 543
37 3300047323 Ga0495683_0004751 Ga0495683_0004751_524_2263 543
38 3300005466 Ga0070685_10017099 Ga0070685_100170992 546
39 3300005548 Ga0070665_100001280 Ga0070665_1000012806 546
40 3300028379 Ga0268266_10000525 Ga0268266_1000052538 546
41 3300005328 Ga0070676_10019788 Ga0070676_100197882 550
42 3300025907 Ga0207645_10024856 Ga0207645_100248562 550
43 3300006173 Ga0070716_100054572 Ga0070716_1000545722 551
44 3300031251 Ga0265327_10008811 Ga0265327_100088115 564
45 3300049663 Ga0501223_001195 Ga0501223_001195_1751_3580 565
46 3300038725 Ga0400484_09557 Ga0400484_09557_703_2556 575
47 3300009093 Ga0105240_10154279 Ga0105240_101542791 582
48 3300036712 Ga0316584_0067314 Ga0316584_0067314_243_2084 583
49 3300005436 Ga0070713_100047532 Ga0070713_1000475323 585
50 3300005563 Ga0068855_100014615 Ga0068855_1000146156 585
51 3300009093 Ga0105240_10089346 Ga0105240_100893461 585
52 3300025913 Ga0207695_10077642 Ga0207695_100776422 585
53 3300025928 Ga0207700_10050788 Ga0207700_100507883 585
54 3300025949 Ga0207667_10012901 Ga0207667_100129018 585
55 3300035695 Ga0373927_0014320 Ga0373927_0014320_2818_4656 585
56 3300010375 Ga0105239_10001651 Ga0105239_1000165121 586
57 3300038725 Ga0400484_09595 Ga0400484_09595_1158_3011 586
58 3300038725 Ga0400484_38473 Ga0400484_38473_2057_3910 586
59 3300039062 Ga0400483_175791 Ga0400483_175791_1129_2982 586
60 3300050510 nmdc:mga06r32_79125_c1 nmdc:mga06r32_79125_c1_1009_2847 586
61 3300032168 Ga0316593_10020185 Ga0316593_100201852 587
62 3300049822 Ga0501035_0024772 Ga0501035_0024772_3059_4921 587
63 3300049823 Ga0501044_0002192 Ga0501044_0002192_14417_16279 587
64 3300035398 Ga0316574_0000630 Ga0316574_0000630_11285_13123 590
65 3300046474 Ga0495605_0006219 Ga0495605_0006219_3033_4880 590
66 3300046491 Ga0495584_0009017 Ga0495584_0009017_275_2143 590
67 3300046506 Ga0495583_0000466 Ga0495583_0000466_54066_55928 590
68 3300046513 Ga0495616_0011279 Ga0495616_0011279_883_2751 590
69 3300046518 Ga0495631_0001611 Ga0495631_0001611_2972_4840 590
70 3300046523 Ga0495644_0001450 Ga0495644_0001450_6608_8476 590
71 3300046665 Ga0495661_0033893 Ga0495661_0033893_1121_2989 590
72 3300046684 Ga0495669_0004328 Ga0495669_0004328_2866_4734 590
73 3300046692 Ga0495671_0032631 Ga0495671_0032631_305_2173 590
74 3300047470 Ga0495681_0009044 Ga0495681_0009044_4134_6002 590
75 3300049459 Ga0495678_009165 Ga0495678_009165_236_2104 590
76 3300005618 Ga0068864_100000002 Ga0068864_100000002373 591
77 3300005843 Ga0068860_100000499 Ga0068860_10000049926 591
78 3300025900 Ga0207710_10006642 Ga0207710_100066423 591
79 3300025923 Ga0207681_10000509 Ga0207681_100005091 591
80 3300025925 Ga0207650_10000002 Ga0207650_10000002368 591
81 3300025931 Ga0207644_10001002 Ga0207644_100010026 591
82 3300025986 Ga0207658_10000001 Ga0207658_10000001984 591
83 3300026095 Ga0207676_10000001 Ga0207676_10000001368 591
84 3300028381 Ga0268264_10000004 Ga0268264_10000004386 591
85 3300009553 Ga0105249_10013365 Ga0105249_100133655 592
86 3300013296 Ga0157374_10001631 Ga0157374_1000163110 592
87 3300014325 Ga0163163_10001034 Ga0163163_100010342 592
88 3300030731 Ga0316177_1192577 Ga0316177_11925773 592
89 3300030736 Ga0316180_1019625 Ga0316180_10196253 592
90 3300031665 Ga0316575_10000941 Ga0316575_100009413 592
91 3300036712 Ga0316584_0012417 Ga0316584_0012417_978_2825 592
92 3300048918 Ga0496115_0079666 Ga0496115_0079666_652_2499 593
93 3300006844 Ga0075428_100016907 Ga0075428_1000169072 594
94 3300046474 Ga0495605_0000217 Ga0495605_0000217_50133_51995 594
95 3300046506 Ga0495583_0000213 Ga0495583_0000213_93076_94923 594
96 3300046519 Ga0495632_0006291 Ga0495632_0006291_3155_5023 594
97 3300046522 Ga0495643_0002351 Ga0495643_0002351_9948_11801 594
98 3300046794 Ga0495589_0000256 Ga0495589_0000256_2701_4563 594
99 3300046810 Ga0495660_0000026 Ga0495660_0000026_7025_8887 594
100 3300047320 Ga0495672_0000886 Ga0495672_0000886_21913_23775 594
101 3300047443 Ga0495687_000593 Ga0495687_000593_5468_7330 594
102 3300048091 Ga0495626_0000786 Ga0495626_0000786_18682_20544 594
103 3300009093 Ga0105240_10000533 Ga0105240_1000053319 597
104 3300009093 Ga0105240_10002479 Ga0105240_1000247917 597
105 3300025254 Ga0209148_1000476 Ga0209148_100047635 597
106 3300025913 Ga0207695_10000632 Ga0207695_1000063232 597
107 3300025913 Ga0207695_10002023 Ga0207695_1000202312 597
108 3300031995 Ga0307409_100022400 Ga0307409_1000224004 597
109 3300032005 Ga0307411_10004377 Ga0307411_100043774 597
110 3300049571 Ga0501034_0000098 Ga0501034_0000098_136441_138255 597
111 3300046665 Ga0495661_0022191 Ga0495661_0022191_251_2113 598
112 iso_pu_bacteria 2643221717 2644645227 600
113 3300007265 Ga0099794_10000035 Ga0099794_1000003521 605
114 3300014326 Ga0157380_10008975 Ga0157380_100089752 605
115 iso_pu_bacteria 2738541278 2738731082 605
116 3300027671 Ga0209588_1000005 Ga0209588_100000536 606
117 3300047320 Ga0495672_0004304 Ga0495672_0004304_3780_5606 606
118 3300039110 Ga0400487_37292 Ga0400487_37292_8917_10755 607
119 3300049591 Ga0501075_0000412 Ga0501075_0000412_16609_18456 608
120 3300049593 Ga0501077_0000765 Ga0501077_0000765_9950_11797 608
121 3300049742 Ga0501080_0001638 Ga0501080_0001638_7733_9580 608
122 3300060353 Ga0501082_0000109 Ga0501082_0000109_53519_55366 608
123 3300005983 Ga0081540_1023954 Ga0081540_10239544 609
124 3300006844 Ga0075428_100005135 Ga0075428_10000513513 609
125 3300050507 nmdc:mga05p37_134729_c1 nmdc:mga05p37_134729_c1_22_1869 609
126 3300050511 nmdc:mga08y16_23063_c1 nmdc:mga08y16_23063_c1_4450_6297 609
127 3300005331 Ga0070670_100000018 Ga0070670_100000018168 610
128 3300005335 Ga0070666_10008217 Ga0070666_100082178 610
129 3300005354 Ga0070675_100128974 Ga0070675_1001289742 610
130 3300005355 Ga0070671_100000084 Ga0070671_1000000846 610
131 3300005355 Ga0070671_100023027 Ga0070671_1000230271 610
132 3300005367 Ga0070667_100000002 Ga0070667_100000002107 610
133 3300005466 Ga0070685_10000003 Ga0070685_1000000311 610
134 3300005468 Ga0070707_100113366 Ga0070707_1001133662 610
135 3300009176 Ga0105242_10000464 Ga0105242_1000046424 610
136 3300025931 Ga0207644_10035454 Ga0207644_100354543 610
137 3300025934 Ga0207686_10000090 Ga0207686_1000009017 610
138 3300025941 Ga0207711_10000765 Ga0207711_100007659 610
139 3300026035 Ga0207703_10039090 Ga0207703_100390902 610
140 3300028379 Ga0268266_10010019 Ga0268266_100100198 610
141 3300028380 Ga0268265_10000455 Ga0268265_1000045518 610
142 3300046506 Ga0495583_0031672 Ga0495583_0031672_526_2373 610
143 3300046525 Ga0495663_0003870 Ga0495663_0003870_285_2132 610
144 3300048917 Ga0496114_0003073 Ga0496114_0003073_7118_8980 610
145 3300053098 Ga0500650_0000108 Ga0500650_0000108_12394_14253 610
146 3300049588 Ga0501072_0019436 Ga0501072_0019436_2259_4097 612
147 3300044684 Ga0466966_0007293 Ga0466966_0007293_1767_3629 614
148 3300045049 Ga0466959_0010381 Ga0466959_0010381_3888_5750 614
149 3300044842 Ga0466957_0007894 Ga0466957_0007894_637_2493 615
150 3300046457 Ga0495590_0002329 Ga0495590_0002329_5296_7143 615
151 3300046463 Ga0495653_0005273 Ga0495653_0005273_6512_8359 615
152 3300046463 Ga0495653_0030896 Ga0495653_0030896_2137_3984 615
153 3300046500 Ga0495596_0000958 Ga0495596_0000958_11902_13749 615
154 3300046524 Ga0495648_0024201 Ga0495648_0024201_523_2370 615
155 3300046528 Ga0495642_0007092 Ga0495642_0007092_1378_3240 615
156 3300046529 Ga0495652_0010387 Ga0495652_0010387_2754_4601 615
157 3300046531 Ga0495665_0008234 Ga0495665_0008234_3343_5190 615
158 3300046535 Ga0495586_0016694 Ga0495586_0016694_1503_3350 615
159 3300046542 Ga0495597_0001302 Ga0495597_0001302_2423_4270 615
160 3300046557 Ga0495622_0022485 Ga0495622_0022485_1019_2866 615
161 3300046642 Ga0495634_0051382 Ga0495634_0051382_380_2227 615
162 3300046660 Ga0495625_0037043 Ga0495625_0037043_299_2146 615
163 3300046665 Ga0495661_0000717 Ga0495661_0000717_8310_10157 615
164 3300046674 Ga0495588_0020354 Ga0495588_0020354_1237_3084 615
165 3300046684 Ga0495669_0000177 Ga0495669_0000177_18049_19896 615
166 3300046794 Ga0495589_0000501 Ga0495589_0000501_18423_20270 615
167 3300046794 Ga0495589_0017558 Ga0495589_0017558_746_2593 615
168 3300047317 Ga0495604_0014381 Ga0495604_0014381_3945_5792 615
169 3300047317 Ga0495604_0041601 Ga0495604_0041601_124_1971 615
170 3300047319 Ga0495674_0002230 Ga0495674_0002230_10133_11980 615
171 3300047321 Ga0495676_0000037 Ga0495676_0000037_97285_99132 615
172 3300047322 Ga0495680_0008176 Ga0495680_0008176_1876_3723 615
173 3300047443 Ga0495687_000064 Ga0495687_000064_137728_139575 615
174 3300047443 Ga0495687_000116 Ga0495687_000116_39447_41309 615
175 3300047444 Ga0495675_0010534 Ga0495675_0010534_1545_3392 615
176 3300047444 Ga0495675_0022782 Ga0495675_0022782_665_2512 615
177 3300047445 Ga0495677_0003269 Ga0495677_0003269_779_2641 615
178 3300048905 Ga0496102_0000302 Ga0496102_0000302_762_2609 615
179 3300048916 Ga0496113_0001323 Ga0496113_0001323_7473_9320 615
180 3300048925 Ga0496122_0000248 Ga0496122_0000248_109223_111070 615
181 3300048926 Ga0496123_0000122 Ga0496123_0000122_129423_131270 615
182 3300048928 Ga0496125_0001501 Ga0496125_0001501_9305_11152 615
183 iso_pu_bacteria 2643221556 2643798280 616
184 iso_pu_bacteria 2643221684 2644475283 616
185 iso_pu_bacteria 8047673197 8047674400 616
186 3300046501 Ga0495607_0004925 Ga0495607_0004925_5468_7351 618
187 3300046513 Ga0495616_0035036 Ga0495616_0035036_591_2474 618
188 3300046519 Ga0495632_0001162 Ga0495632_0001162_16682_18565 618
189 3300046522 Ga0495643_0003610 Ga0495643_0003610_2299_4170 618
190 3300046665 Ga0495661_0020674 Ga0495661_0020674_753_2636 618
191 3300047445 Ga0495677_0004086 Ga0495677_0004086_2068_3951 618
192 3300048091 Ga0495626_0006363 Ga0495626_0006363_76_1947 618
193 3300003759 Ga0055525_1000105 Ga0055525_100010560 620
194 3300005327 Ga0070658_10030572 Ga0070658_100305724 620
195 3300005327 Ga0070658_10067440 Ga0070658_100674403 620
196 3300005339 Ga0070660_100029607 Ga0070660_1000296072 620
197 3300005344 Ga0070661_100014331 Ga0070661_1000143314 620
198 3300005366 Ga0070659_100008588 Ga0070659_1000085884 620
199 3300005563 Ga0068855_100016288 Ga0068855_1000162886 620
200 3300005564 Ga0070664_100033091 Ga0070664_1000330914 620
201 3300010375 Ga0105239_10185661 Ga0105239_101856612 620
202 3300025230 Ga0209563_100007 Ga0209563_1000071316 620
203 3300025909 Ga0207705_10006888 Ga0207705_100068886 620
204 3300025919 Ga0207657_10056037 Ga0207657_100560374 620
205 3300025920 Ga0207649_10010477 Ga0207649_100104771 620
206 3300025932 Ga0207690_10008143 Ga0207690_100081433 620
207 3300025932 Ga0207690_10017092 Ga0207690_100170921 620
208 3300025949 Ga0207667_10019261 Ga0207667_100192615 620
209 3300037418 Ga0395900_0015061 Ga0395900_0015061_4529_6391 620
210 3300037418 Ga0395900_0053441 Ga0395900_0053441_1756_3618 620
211 3300037466 Ga0395898_0026568 Ga0395898_0026568_779_2641 620
212 3300037471 Ga0395905_0011508 Ga0395905_0011508_2191_4053 620
213 3300037471 Ga0395905_0097218 Ga0395905_0097218_117_1979 620
214 3300038443 Ga0395901_0015889 Ga0395901_0015889_4517_6379 620
215 3300042005 Ga0439448_0000170 Ga0439448_0000170_7866_9728 620
216 3300044656 Ga0466969_0015930 Ga0466969_0015930_1178_3040 620
217 3300044683 Ga0466965_0016521 Ga0466965_0016521_254_2116 620
218 3300044684 Ga0466966_0001482 Ga0466966_0001482_10874_12736 620
219 3300044706 Ga0466964_0007231 Ga0466964_0007231_517_2379 620
220 3300044706 Ga0466964_0013996 Ga0466964_0013996_456_2318 620
221 3300044842 Ga0466957_0012826 Ga0466957_0012826_1588_3450 620
222 3300044901 Ga0466960_0009404 Ga0466960_0009404_418_2280 620
223 3300045049 Ga0466959_0023654 Ga0466959_0023654_2005_3867 620
224 3300045976 Ga0466967_0024012 Ga0466967_0024012_1984_3846 620
225 3300046474 Ga0495605_0013845 Ga0495605_0013845_1441_3303 620
226 3300046491 Ga0495584_0000342 Ga0495584_0000342_9769_11631 620
227 3300046491 Ga0495584_0018443 Ga0495584_0018443_1123_2985 620
228 3300046501 Ga0495607_0001072 Ga0495607_0001072_2368_4230 620
229 3300046513 Ga0495616_0036336 Ga0495616_0036336_380_2242 620
230 3300046528 Ga0495642_0000432 Ga0495642_0000432_18249_20111 620
231 3300046538 Ga0495609_0000002 Ga0495609_0000002_602422_604284 620
232 3300046665 Ga0495661_0001011 Ga0495661_0001011_2574_4436 620
233 3300046665 Ga0495661_0001138 Ga0495661_0001138_11363_13225 620
234 3300046674 Ga0495588_0000067 Ga0495588_0000067_78296_80158 620
235 3300046794 Ga0495589_0000009 Ga0495589_0000009_132572_134434 620
236 3300047443 Ga0495687_000013 Ga0495687_000013_132572_134434 620
237 3300047443 Ga0495687_000162 Ga0495687_000162_93299_95176 620
238 3300047445 Ga0495677_0000142 Ga0495677_0000142_11705_13567 620
239 3300048091 Ga0495626_0002070 Ga0495626_0002070_5981_7843 620
240 3300048910 Ga0496107_0063717 Ga0496107_0063717_255_2117 620
241 3300048925 Ga0496122_0002307 Ga0496122_0002307_23573_25435 620
242 3300048925 Ga0496122_0008689 Ga0496122_0008689_6142_8004 620
243 3300048926 Ga0496123_0006928 Ga0496123_0006928_3624_5486 620

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16861

Carbam_trans_C

Carbamoyltransferase C-terminus

443

632

0.99

PF02543

Carbam_trans_N

Carbamoyltransferase N-terminus

36

381

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vzq-assembly1.cif.gz_A the structure of gdmn v24y/g157a/r158a/g188r mutant in complex with carbamoyl adenylate intermediate 0.8889 4 609
7vzu-assembly1.cif.gz_A the structure of gdmn y82f mutant 0.8833 4 609
7vx0-assembly1.cif.gz_B the structure of gdmn complex with atp 0.8809 4 609
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8462 4 605
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8435 4 605
ID Description Score Start End Superfamily
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9432 376 599 3.90.870.20
af_Q58451_301_510_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9185 374 598 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9143 374 598 3.90.870.20
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9075 376 599 3.90.870.20
3veoA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8914 3 79 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2E5EK92-F1-model_v4 Carbamoyltransferase domain-containing protein 0.9801 1 67 GO:0003824
GO:0009058
AF-A0A2E8AZT3-F1-model_v4 Carbamoyltransferase 0.9789 2 611 GO:0003824
GO:0009058
AF-A0A2E8B268-F1-model_v4 Carbamoyltransferase 0.9732 1 620 GO:0003824
GO:0009058
AF-A0A1V4XRV0-F1-model_v4 Decarbamoylnovobiocin carbamoyltransferase (EC 2.1.3.12) 0.9724 4 620 GO:0009058
GO:0016740
AF-B7AUH0-F1-model_v4 Carbamoyltransferase 0.9717 4 620 GO:0003824
GO:0009058

Feature Viewer

pLDDT pTM Quality
89.01 0.9 High
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Predicted Structure (AlphaFold2)

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