F355166

General Info

Members Datasets Scaffolds Average Seq Length
242 182 484 481

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2895427314|2895438460
Length 542
Sequence DRLVNVLGGYGVRLCNRPQARTAWLRSVAVADAADRHVSGDLLLAVGASSLAEAMEWATAAKATAVLVKAPTTGPGDQGGADATGPGGGADADVEAAALSDRGGAGVERQAAALGDRHHLAVLLAEPAVSWSQLAGVVYGLVLESRETASGRGPTDLFALADSLADVIGGAVTIEDRHWRVLAYSRSQEAGDPARLETILARRVPDRLRELFQQQGVLTRLAADEPVFVPADPGNGLTGRMAVAVRAGRELLGSVWVTCERPLTGAHRHALADGARTVALHLLRSRASADLERQVESDLVIRLLDGSADAVTAISRLGLAARPWRVVAVRAHTGGERQAALLLAFEQATTGFGWSRPGRSALLGDTLYTILPAEQAESARRWITALRAELPGQVHVAAGIGAPAEVAELPASRQEADECLALHEDGPPGAVPPAYDESWGDILLRRLRAAARTGRVPARGPVSTLLRHDSRHGTHFAATLRAWLESQGDLASAAERLGVHPNTVRNRLRKMGELAPLDLDDARQRLAMTIMLAASSDEVEQL

Samples

Sample ID Description Type Environment
1 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
102 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
103 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
104 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
105 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
158 2547132424 Nocardia nova SH22a Isolate Unclassified
159 2582580736 Prauserella sp. Am3 Isolate Unclassified
160 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
161 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
162 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
163 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
164 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
165 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
166 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
167 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
168 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
169 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
170 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
171 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
172 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
173 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
174 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
175 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
176 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
177 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
178 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
179 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
180 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
181 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
182 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.43
Metatranscriptomes 0
Isolates 11.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.81
Nodule 0.41
Rhizoplane 7.85
Rhizosphere 69.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24750J21931_1002810 3300002070 Bacteria 2092
2 JGI24749J21850_1002735 3300002076 Bacteria 2472
3 JGI24744J21845_10002193 3300002077 Bacteria 3972
4 Ga0055540_1001452 3300003792 Bacteria 14119
5 Ga0055540_1002954 3300003792 Bacteria 8537
6 Ga0070676_10032144 3300005328 Bacteria 3004
7 Ga0070666_10035667 3300005335 Bacteria 3299
8 Ga0070682_100035292 3300005337 Bacteria 3052
9 Ga0068868_100036465 3300005338 Bacteria 3806
10 Ga0070689_100078755 3300005340 Bacteria 2584
11 Ga0070692_10070339 3300005345 Bacteria 1863
12 Ga0070669_100063690 3300005353 Bacteria 2714
13 Ga0070674_100030490 3300005356 Bacteria 3564
14 Ga0070673_100084563 3300005364 Bacteria 2580
15 Ga0070667_100010005 3300005367 Bacteria 7858
16 Ga0070667_100153861 3300005367 Bacteria 2022
17 Ga0070714_100069404 3300005435 Bacteria 3043
18 Ga0070714_100123500 3300005435 Bacteria 2305
19 Ga0070710_10000061 3300005437 Bacteria 50295
20 Ga0070710_10014876 3300005437 Bacteria 3923
21 Ga0070701_10022695 3300005438 Bacteria 3012
22 Ga0070711_100002247 3300005439 Bacteria 10960
23 Ga0070700_100021072 3300005441 Bacteria 3786
24 Ga0070663_100010463 3300005455 Bacteria 5781
25 Ga0070678_100092520 3300005456 Bacteria 2323
26 Ga0070662_100034417 3300005457 Bacteria 3572
27 Ga0068867_100027265 3300005459 Bacteria 4104
28 Ga0070685_10007965 3300005466 Bacteria 5432
29 Ga0068853_100041913 3300005539 Bacteria 3912
30 Ga0070695_100067989 3300005545 Bacteria 2325
31 Ga0070696_100063841 3300005546 Bacteria 2580
32 Ga0070665_100055842 3300005548 Bacteria 3960
33 Ga0070704_100043620 3300005549 Bacteria 3110
34 Ga0068855_100161928 3300005563 Bacteria 2538
35 Ga0068854_100077622 3300005578 Bacteria 2445
36 Ga0070702_100042963 3300005615 Bacteria 2544
37 Ga0068859_100075326 3300005617 Bacteria 3415
38 Ga0068866_10018266 3300005718 Bacteria 3168
39 Ga0068858_100075909 3300005842 Bacteria 3122
40 Ga0068858_100234424 3300005842 Bacteria 1740
41 Ga0068860_100076094 3300005843 Bacteria 3192
42 Ga0068862_100099195 3300005844 Bacteria 2545
43 Ga0075365_10018833 3300006038 Bacteria 4252
44 Ga0075365_10028922 3300006038 Bacteria 3537
45 Ga0075363_100000260 3300006048 Bacteria 15154
46 Ga0075363_100000338 3300006048 Bacteria 13991
47 Ga0075363_100000544 3300006048 Bacteria 12229
48 Ga0075364_10003919 3300006051 Bacteria 8535
49 Ga0075364_10018123 3300006051 Bacteria 4405
50 Ga0075364_10067293 3300006051 Bacteria 2354
51 Ga0070715_10010775 3300006163 Bacteria 3269
52 Ga0070716_100012480 3300006173 Bacteria 4308
53 Ga0070712_100049906 3300006175 Bacteria 2908
54 Ga0070712_100051265 3300006175 Bacteria 2874
55 Ga0075362_10028486 3300006177 Bacteria 2399
56 Ga0075370_10021677 3300006353 Bacteria 3521
57 Ga0075428_100008759 3300006844 Bacteria 11223
58 Ga0068865_100004712 3300006881 Bacteria 8238
59 Ga0097620_100075318 3300006931 Bacteria 3415
60 Ga0105250_10026820 3300009092 Bacteria 2321
61 Ga0105245_10058345 3300009098 Bacteria 3474
62 Ga0105243_10032365 3300009148 Bacteria 4040
63 Ga0105242_10028321 3300009176 Bacteria 4458
64 Ga0105242_10145924 3300009176 Bacteria 2058
65 Ga0105248_10105123 3300009177 Bacteria 3183
66 Ga0105248_10161910 3300009177 Bacteria 2523
67 Ga0105237_10084079 3300009545 Bacteria 3173
68 Ga0157374_10120915 3300013296 Bacteria 2527
69 Ga0157378_10091523 3300013297 Bacteria 2765
70 Ga0157372_10027124 3300013307 Bacteria 6234
71 Ga0157375_10084284 3300013308 Bacteria 3226
72 Ga0157380_10059908 3300014326 Bacteria 3040
73 Ga0163161_10034595 3300017792 Bacteria 3615
74 Ga0209673_1004309 3300025273 Bacteria 7683
75 Ga0209051_1001534 3300025303 Bacteria 19222
76 Ga0209051_1003643 3300025303 Bacteria 9974
77 Ga0209051_1006187 3300025303 Bacteria 6786
78 Ga0207692_10036725 3300025898 Bacteria 2392
79 Ga0207642_10004565 3300025899 Bacteria 4472
80 Ga0207710_10006728 3300025900 Bacteria 4900
81 Ga0207688_10027512 3300025901 Bacteria 3128
82 Ga0207685_10006986 3300025905 Bacteria 3115
83 Ga0207645_10008733 3300025907 Bacteria 7056
84 Ga0207671_10108960 3300025914 Bacteria 2105
85 Ga0207693_10044868 3300025915 Bacteria 3474
86 Ga0207663_10085221 3300025916 Bacteria 2080
87 Ga0207681_10158363 3300025923 Bacteria 1704
88 Ga0207687_10015187 3300025927 Bacteria 5047
89 Ga0207700_10056029 3300025928 Bacteria 2966
90 Ga0207664_10090303 3300025929 Bacteria 2510
91 Ga0207706_10068365 3300025933 Bacteria 3126
92 Ga0207686_10095690 3300025934 Bacteria 1971
93 Ga0207669_10010365 3300025937 Bacteria 4483
94 Ga0207704_10001585 3300025938 Bacteria 10212
95 Ga0207665_10028386 3300025939 Bacteria 3696
96 Ga0207711_10121505 3300025941 Bacteria 2332
97 Ga0207667_10135702 3300025949 Bacteria 2534
98 Ga0207668_10047131 3300025972 Bacteria 2949
99 Ga0207640_10048605 3300025981 Bacteria 2743
100 Ga0207658_10091652 3300025986 Bacteria 2358
101 Ga0207677_10022003 3300026023 Bacteria 3909
102 Ga0207703_10097580 3300026035 Bacteria 2483
103 Ga0207678_10007988 3300026067 Bacteria 9329
104 Ga0207678_10117294 3300026067 Bacteria 2271
105 Ga0207708_10009562 3300026075 Bacteria 7188
106 Ga0207648_10005110 3300026089 Bacteria 13295
107 Ga0207676_10269011 3300026095 Bacteria 1543
108 Ga0207683_10014086 3300026121 Bacteria 6814
109 Ga0268264_10065830 3300028381 Bacteria 3054
110 Ga0307518_10000028 3300031838 Bacteria 98010
111 Ga0307410_10089631 3300031852 Bacteria 2180
112 Ga0307406_10047383 3300031901 Bacteria 2709
113 Ga0307407_10033235 3300031903 Bacteria 2813
114 Ga0307409_100024967 3300031995 Bacteria 4181
115 Ga0307409_100068727 3300031995 Bacteria 2803
116 Ga0307507_10016367 3300033179 Bacteria 8630
117 Ga0373931_0033447 3300035691 Bacteria 2664
118 Ga0439461_0006077 3300041410 Bacteria 2090
119 Ga0439466_0008752 3300041411 Bacteria 3811
120 Ga0439465_0000759 3300041413 Bacteria 10016
121 Ga0439465_0004940 3300041413 Bacteria 4285
122 Ga0439465_0006910 3300041413 Bacteria 3605
123 Ga0451795_0111402 3300041456 Bacteria 1994
124 Ga0439445_0005045 3300042004 Bacteria 2998
125 Ga0439445_0006074 3300042004 Bacteria 2771
126 Ga0466972_0001309 3300044658 Bacteria 12046
127 Ga0466972_0007912 3300044658 Bacteria 5330
128 Ga0466972_0019904 3300044658 Bacteria 3354
129 Ga0466965_0006595 3300044683 Bacteria 5288
130 Ga0466965_0007509 3300044683 Bacteria 5009
131 Ga0466965_0008859 3300044683 Bacteria 4665
132 Ga0466965_0012760 3300044683 Bacteria 3956
133 Ga0466965_0017388 3300044683 Bacteria 3437
134 Ga0466965_0023462 3300044683 Bacteria 2980
135 Ga0466966_0017382 3300044684 Bacteria 4753
136 Ga0466966_0022866 3300044684 Bacteria 4096
137 Ga0466961_0063955 3300044693 Bacteria 2338
138 Ga0466963_0112309 3300044694 Bacteria 1871
139 Ga0466963_0198735 3300044694 Bacteria 1402
140 Ga0466971_0004471 3300044719 Bacteria 6040
141 Ga0466968_0007431 3300044735 Bacteria 4167
142 Ga0466968_0020666 3300044735 Bacteria 2660
143 Ga0466970_0005942 3300044765 Bacteria 6085
144 Ga0466970_0039356 3300044765 Bacteria 2509
145 Ga0466960_0000400 3300044901 Bacteria 14816
146 Ga0466960_0007067 3300044901 Bacteria 4538
147 Ga0466959_0072900 3300045049 Bacteria 2484
148 Ga0466959_0073187 3300045049 Bacteria 2479
149 Ga0466958_0011468 3300045836 Bacteria 4991
150 Ga0466958_0020037 3300045836 Bacteria 3898
151 Ga0466967_0007514 3300045976 Bacteria 7871
152 Ga0466967_0068419 3300045976 Bacteria 3171
153 Ga0495606_0034322 3300046507 Bacteria 3484
154 Ga0495686_0042224 3300047472 Bacteria 2901
155 Ga0496100_0009449 3300048903 Bacteria 5482
156 Ga0496100_0071292 3300048903 Bacteria 2319
157 Ga0496101_0007171 3300048904 Bacteria 7209
158 Ga0496102_0065438 3300048905 Bacteria 3332
159 Ga0496102_0076828 3300048905 Bacteria 3072
160 Ga0496103_0005568 3300048906 Bacteria 7532
161 Ga0496104_0003706 3300048907 Bacteria 13188
162 Ga0496104_0085826 3300048907 Bacteria 3005
163 Ga0496105_0016229 3300048908 Bacteria 5942
164 Ga0496106_0001626 3300048909 Bacteria 16884
165 Ga0496106_0010915 3300048909 Bacteria 6713
166 Ga0496106_0037601 3300048909 Bacteria 3622
167 Ga0496107_0007423 3300048910 Bacteria 7559
168 Ga0496107_0035992 3300048910 Bacteria 3550
169 Ga0496112_0074813 3300048915 Bacteria 3350
170 Ga0496114_0004596 3300048917 Bacteria 10721
171 Ga0496114_0062407 3300048917 Bacteria 3118
172 Ga0496115_0044967 3300048918 Bacteria 3524
173 Ga0496119_0076986 3300048922 Bacteria 1934
174 Ga0496122_0023612 3300048925 Bacteria 5410
175 Ga0496123_0023849 3300048926 Bacteria 4671
176 Ga0496126_0018421 3300048929 Bacteria 6918
177 Ga0501032_0000481 3300049569 Bacteria 32306
178 Ga0501034_0024491 3300049571 Bacteria 6140
179 Ga0501034_0123181 3300049571 Bacteria 2578
180 Ga0501036_0005441 3300049572 Bacteria 10316
181 Ga0501037_0008233 3300049573 Bacteria 7643
182 Ga0501038_0008469 3300049574 Bacteria 9458
183 Ga0501039_0012987 3300049575 Bacteria 6368
184 Ga0501043_0025041 3300049579 Bacteria 4681
185 Ga0501046_0000823 3300049580 Bacteria 30301
186 Ga0501047_0065403 3300049581 Bacteria 3505
187 Ga0501047_0161864 3300049581 Bacteria 2109
188 Ga0501048_0047864 3300049582 Bacteria 3050
189 Ga0501069_0002762 3300049585 Bacteria 8971
190 Ga0501069_0010009 3300049585 Bacteria 5013
191 Ga0501070_0000259 3300049586 Bacteria 50030
192 Ga0501070_0012695 3300049586 Bacteria 7104
193 Ga0501073_0026180 3300049589 Bacteria 4180
194 Ga0501080_0175975 3300049742 Bacteria 1971
195 Ga0501035_0025782 3300049822 Bacteria 5388
196 Ga0501044_0004792 3300049823 Bacteria 15135
197 Ga0501044_0007835 3300049823 Bacteria 11742
198 Ga0501044_0061685 3300049823 Bacteria 3835
199 nmdc:mga03n38_1131_c1 3300050490 Bacteria 7381
200 nmdc:mga03n38_1219_c1 3300050490 Bacteria 7217
201 nmdc:mga03n38_148_c1 3300050490 Bacteria 15468
202 nmdc:mga00v17_11164_c1 3300050491 Bacteria 4931
203 nmdc:mga00v17_45542_c1 3300050491 Bacteria 2651
204 nmdc:mga00v17_4690_c1 3300050491 Bacteria 7142
205 nmdc:mga00v17_49581_c1 3300050491 Bacteria 2173
206 nmdc:mga00v17_5471_c1 3300050491 Bacteria 6688
207 nmdc:mga0yw44_60347_c1 3300050492 Bacteria 2323
208 nmdc:mga0yw44_76559_c1 3300050492 Bacteria 2088
209 nmdc:mga07m45_14993_c2 3300050496 Bacteria 2464
210 nmdc:mga07m45_58818_c1 3300050496 Bacteria 2174
211 nmdc:mga0sz30_19717_c1 3300050516 Bacteria 2713
212 nmdc:mga0sz30_20455_c1 3300050516 Bacteria 2669
213 nmdc:mga0sz30_2799_c2 3300050516 Bacteria 5073
214 Ga0466962_0004816 3300061719 Bacteria 6496
215 2895438460 2895427314 Bacteria 13147766
216 2548695967 2547132424 Bacteria 8348532
217 2583148633 2582580736 Bacteria 5325865
218 2586061096 2585427649 Bacteria 9053857
219 2644485363 2643221687 Bacteria 6500351
220 2644636271 2643221715 Bacteria 6671032
221 2676493981 2675903060 Bacteria 10051191
222 2753070151 2751185734 Bacteria 8863695
223 2753073840 2751185734 Bacteria 8863695
224 2795781968 2795385470 Bacteria 8317180
225 2842135942 2842134933 Bacteria 5847019
226 2866554418 2866552031 Bacteria 5824618
227 2870723452 2870721527 Bacteria 9689237
228 2870730054 2870721527 Bacteria 9689237
229 2884700952 2884693830 Bacteria 11273186
230 2891399388 2891395885 Bacteria 9251614
231 2891558845 2891554331 Bacteria 8812224
232 2895452331 2895442618 Bacteria 11027144
233 2902800168 2902799365 Bacteria 5419524
234 2902815790 2902810491 Bacteria 6794147
235 2902838122 2902837492 Bacteria 6697721
236 2917739005 2917736166 Bacteria 9690793
237 2919714019 2919713450 Bacteria 7431245
238 2929217962 2929212328 Bacteria 7708288
239 2939586858 2939582691 Bacteria 7088898
240 8047711881 8047710418 Bacteria 11023148
241 8055173552 8055172936 Bacteria 9305943
242 8056210673 8056207758 Bacteria 8639239
243 JGI24750J21931_1002810
244 JGI24749J21850_1002735
245 JGI24744J21845_10002193
246 Ga0055540_1001452
247 Ga0055540_1002954
248 Ga0070676_10032144
249 Ga0070666_10035667
250 Ga0070682_100035292
251 Ga0068868_100036465
252 Ga0070689_100078755
253 Ga0070692_10070339
254 Ga0070669_100063690
255 Ga0070674_100030490
256 Ga0070673_100084563
257 Ga0070667_100010005
258 Ga0070667_100153861
259 Ga0070714_100069404
260 Ga0070714_100123500
261 Ga0070710_10000061
262 Ga0070710_10014876
263 Ga0070701_10022695
264 Ga0070711_100002247
265 Ga0070700_100021072
266 Ga0070663_100010463
267 Ga0070678_100092520
268 Ga0070662_100034417
269 Ga0068867_100027265
270 Ga0070685_10007965
271 Ga0068853_100041913
272 Ga0070695_100067989
273 Ga0070696_100063841
274 Ga0070665_100055842
275 Ga0070704_100043620
276 Ga0068855_100161928
277 Ga0068854_100077622
278 Ga0070702_100042963
279 Ga0068859_100075326
280 Ga0068866_10018266
281 Ga0068858_100075909
282 Ga0068858_100234424
283 Ga0068860_100076094
284 Ga0068862_100099195
285 Ga0075365_10018833
286 Ga0075365_10028922
287 Ga0075363_100000260
288 Ga0075363_100000338
289 Ga0075363_100000544
290 Ga0075364_10003919
291 Ga0075364_10018123
292 Ga0075364_10067293
293 Ga0070715_10010775
294 Ga0070716_100012480
295 Ga0070712_100049906
296 Ga0070712_100051265
297 Ga0075362_10028486
298 Ga0075370_10021677
299 Ga0075428_100008759
300 Ga0068865_100004712
301 Ga0097620_100075318
302 Ga0105250_10026820
303 Ga0105245_10058345
304 Ga0105243_10032365
305 Ga0105242_10028321
306 Ga0105242_10145924
307 Ga0105248_10105123
308 Ga0105248_10161910
309 Ga0105237_10084079
310 Ga0157374_10120915
311 Ga0157378_10091523
312 Ga0157372_10027124
313 Ga0157375_10084284
314 Ga0157380_10059908
315 Ga0163161_10034595
316 Ga0209673_1004309
317 Ga0209051_1001534
318 Ga0209051_1003643
319 Ga0209051_1006187
320 Ga0207692_10036725
321 Ga0207642_10004565
322 Ga0207710_10006728
323 Ga0207688_10027512
324 Ga0207685_10006986
325 Ga0207645_10008733
326 Ga0207671_10108960
327 Ga0207693_10044868
328 Ga0207663_10085221
329 Ga0207681_10158363
330 Ga0207687_10015187
331 Ga0207700_10056029
332 Ga0207664_10090303
333 Ga0207706_10068365
334 Ga0207686_10095690
335 Ga0207669_10010365
336 Ga0207704_10001585
337 Ga0207665_10028386
338 Ga0207711_10121505
339 Ga0207667_10135702
340 Ga0207668_10047131
341 Ga0207640_10048605
342 Ga0207658_10091652
343 Ga0207677_10022003
344 Ga0207703_10097580
345 Ga0207678_10007988
346 Ga0207678_10117294
347 Ga0207708_10009562
348 Ga0207648_10005110
349 Ga0207676_10269011
350 Ga0207683_10014086
351 Ga0268264_10065830
352 Ga0307518_10000028
353 Ga0307410_10089631
354 Ga0307406_10047383
355 Ga0307407_10033235
356 Ga0307409_100024967
357 Ga0307409_100068727
358 Ga0307507_10016367
359 Ga0373931_0033447
360 Ga0439461_0006077
361 Ga0439466_0008752
362 Ga0439465_0000759
363 Ga0439465_0004940
364 Ga0439465_0006910
365 Ga0451795_0111402
366 Ga0439445_0005045
367 Ga0439445_0006074
368 Ga0466972_0001309
369 Ga0466972_0007912
370 Ga0466972_0019904
371 Ga0466965_0006595
372 Ga0466965_0007509
373 Ga0466965_0008859
374 Ga0466965_0012760
375 Ga0466965_0017388
376 Ga0466965_0023462
377 Ga0466966_0017382
378 Ga0466966_0022866
379 Ga0466961_0063955
380 Ga0466963_0112309
381 Ga0466963_0198735
382 Ga0466971_0004471
383 Ga0466968_0007431
384 Ga0466968_0020666
385 Ga0466970_0005942
386 Ga0466970_0039356
387 Ga0466960_0000400
388 Ga0466960_0007067
389 Ga0466959_0072900
390 Ga0466959_0073187
391 Ga0466958_0011468
392 Ga0466958_0020037
393 Ga0466967_0007514
394 Ga0466967_0068419
395 Ga0495606_0034322
396 Ga0495686_0042224
397 Ga0496100_0009449
398 Ga0496100_0071292
399 Ga0496101_0007171
400 Ga0496102_0065438
401 Ga0496102_0076828
402 Ga0496103_0005568
403 Ga0496104_0003706
404 Ga0496104_0085826
405 Ga0496105_0016229
406 Ga0496106_0001626
407 Ga0496106_0010915
408 Ga0496106_0037601
409 Ga0496107_0007423
410 Ga0496107_0035992
411 Ga0496112_0074813
412 Ga0496114_0004596
413 Ga0496114_0062407
414 Ga0496115_0044967
415 Ga0496119_0076986
416 Ga0496122_0023612
417 Ga0496123_0023849
418 Ga0496126_0018421
419 Ga0501032_0000481
420 Ga0501034_0024491
421 Ga0501034_0123181
422 Ga0501036_0005441
423 Ga0501037_0008233
424 Ga0501038_0008469
425 Ga0501039_0012987
426 Ga0501043_0025041
427 Ga0501046_0000823
428 Ga0501047_0065403
429 Ga0501047_0161864
430 Ga0501048_0047864
431 Ga0501069_0002762
432 Ga0501069_0010009
433 Ga0501070_0000259
434 Ga0501070_0012695
435 Ga0501073_0026180
436 Ga0501080_0175975
437 Ga0501035_0025782
438 Ga0501044_0004792
439 Ga0501044_0007835
440 Ga0501044_0061685
441 nmdc:mga03n38_1131_c1
442 nmdc:mga03n38_1219_c1
443 nmdc:mga03n38_148_c1
444 nmdc:mga00v17_11164_c1
445 nmdc:mga00v17_45542_c1
446 nmdc:mga00v17_4690_c1
447 nmdc:mga00v17_49581_c1
448 nmdc:mga00v17_5471_c1
449 nmdc:mga0yw44_60347_c1
450 nmdc:mga0yw44_76559_c1
451 nmdc:mga07m45_14993_c2
452 nmdc:mga07m45_58818_c1
453 nmdc:mga0sz30_19717_c1
454 nmdc:mga0sz30_20455_c1
455 nmdc:mga0sz30_2799_c2
456 Ga0466962_0004816
457 2895438460
458 2548695967
459 2583148633
460 2586061096
461 2644485363
462 2644636271
463 2676493981
464 2753070151
465 2753073840
466 2795781968
467 2842135942
468 2866554418
469 2870723452
470 2870730054
471 2884700952
472 2891399388
473 2891558845
474 2895452331
475 2902800168
476 2902815790
477 2902838122
478 2917739005
479 2919714019
480 2929217962
481 2939586858
482 8047711881
483 8055173552
484 8056210673

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13556

HTH_30

PucR C-terminal helix-turn-helix domain

476

534

0.96

PF17853

GGDEF_2

GGDEF-like domain

304

422

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5z4y-assembly1.cif.gz_B crystal structure of pacysb ntd domain with space group p4 0.9245 397 435
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.8495 397 435
2gx5-assembly1.cif.gz_A n-terminal gaf domain of transcriptional pleiotropic repressor cody 0.735 64 209
3o5y-assembly2.cif.gz_B the crystal structure of the gaf domain of a two-component sensor histidine kinase from bacillus halodurans to 2.45a 0.7296 139 210
2m7v-assembly1.cif.gz_A green light-absorbing state of tepixj, an active cyanobacteriochrome domain 0.723 73 213
ID Description Score Start End Superfamily
af_P75836_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9805 397 435 1.10.10.10
3m1eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9589 398 435 1.10.10.10
af_P0A9F6_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9569 397 435 1.10.10.10
af_P0ACR0_3_94_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9442 397 435 1.10.10.10
af_P77171_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9312 398 436 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A6P1CK82-F1-model_v4 PucR family transcriptional regulator 0.9821 277 457
AF-A0A1T3VT46-F1-model_v4 PucR family transcriptional regulator 0.965 75 163
AF-D5P395-F1-model_v4 Uncharacterized protein 0.9569 94 460
AF-D5P395-F1-model_v4 Uncharacterized protein 0.9518 94 460
AF-A0A2S8BJR7-F1-model_v4 Uncharacterized protein 0.9399 163 332

Map