F355099

General Info

Members Datasets Scaffolds Average Seq Length
242 151 484 451

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_99057_c1|nmdc:mga08y16_99057_c1_719_2164
Length 481
Sequence MGGYQVALGPLPNFDFYSTSERRRLMMRVSSKAWFALSVLFAINTLNFYDRQILGAVGETVREEWRLSDTALGSLGTAFTLLYAAVGVPIGRLTDRFSRRWILFVGVTLWSLLTAASGLARNFSELFIVRLGVGSGEAACAPASASLIGDLFPASRRAKALSVFMLGLPLGIALSFLGSSLLEHRFGWRSTFYIALVPGIICALLALMVSEPARGAAEVHQITSSKRKGSPYLLVLSIPTMWWIIASGALHNFNMYAIGAFLSPFLQRVHQVSKLNAGMISMVVYGLAGVPGLILGGMLSDRLVRHKANGRLVLSSIAIFISAPLMYLSLTRPAGDLTGFILLAGFGMAAMYIYYATVYSAIQDVIEPALRGTAMALYFFAMYVLGASLGPVGMGFLSNYFTRQAAVNAGVTETTFQALRPFAAQGLHSALYVVPVFGILLGLVLFAASRTVAKDMEKLQSWMRESVSSEAKGKSYASAAD

Samples

Sample ID Description Type Environment
1 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
113 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
149 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 2.07
Rhizosphere 97.11
Stem 0
Stem Tuber 0
Unclassified 12.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08y16_99057_c1 3300050511 Bacteria 3035
2 Ga0065712_10008387 3300005290 Bacteria 4260
3 Ga0065712_10107023 3300005290 Unclassified 1904
4 Ga0065707_10001541 3300005295 Bacteria 8030
5 Ga0070690_100004751 3300005330 Bacteria 7581
6 Ga0070690_100005744 3300005330 Bacteria 6990
7 Ga0070690_100093084 3300005330 Unclassified 1988
8 Ga0070670_100054542 3300005331 Bacteria 3432
9 Ga0068869_100043836 3300005334 Bacteria 3215
10 Ga0070666_10008633 3300005335 Bacteria 6334
11 Ga0070666_10060611 3300005335 Bacteria 2561
12 Ga0068868_100071845 3300005338 Bacteria 2760
13 Ga0070689_100012668 3300005340 Bacteria 6083
14 Ga0070687_100002814 3300005343 Bacteria 6632
15 Ga0070668_100035424 3300005347 Bacteria 3805
16 Ga0070671_100008889 3300005355 Bacteria 8059
17 Ga0070705_100028600 3300005440 Bacteria 3055
18 Ga0070700_100000008 3300005441 Bacteria 192589
19 Ga0070694_100001660 3300005444 Bacteria 13091
20 Ga0070708_100000441 3300005445 Bacteria 31032
21 Ga0070708_100077199 3300005445 Bacteria 3009
22 Ga0070662_100145629 3300005457 Unclassified 1840
23 Ga0070681_10006962 3300005458 Bacteria 11002
24 Ga0068867_100073571 3300005459 Bacteria 2559
25 Ga0070706_100012845 3300005467 Bacteria 7752
26 Ga0070706_100029037 3300005467 Bacteria 5094
27 Ga0070707_100028347 3300005468 Bacteria 5329
28 Ga0070698_100066790 3300005471 Bacteria 3618
29 Ga0070698_100068714 3300005471 Bacteria 3559
30 Ga0070698_100072558 3300005471 Unclassified 3450
31 Ga0070698_100248274 3300005471 Unclassified 1712
32 Ga0070699_100003798 3300005518 Bacteria 13343
33 Ga0070699_100013268 3300005518 Bacteria 7106
34 Ga0070697_100000949 3300005536 Bacteria 21843
35 Ga0070697_100075866 3300005536 Bacteria 2764
36 Ga0068853_100010487 3300005539 Bacteria 7495
37 Ga0070672_100068459 3300005543 Bacteria 2816
38 Ga0070686_100019975 3300005544 Unclassified 3958
39 Ga0070686_100025815 3300005544 Bacteria 3538
40 Ga0070696_100070431 3300005546 Unclassified 2460
41 Ga0070665_100005567 3300005548 Bacteria 12955
42 Ga0070704_100037511 3300005549 Unclassified 3312
43 Ga0068857_100042461 3300005577 Bacteria 4035
44 Ga0068857_100140857 3300005577 Bacteria 2180
45 Ga0068854_100001996 3300005578 Bacteria 12490
46 Ga0068854_100041337 3300005578 Bacteria 3257
47 Ga0070702_100016912 3300005615 Bacteria 3753
48 Ga0070702_100030002 3300005615 Bacteria 2961
49 Ga0068859_100028393 3300005617 Bacteria 5608
50 Ga0068859_100059627 3300005617 Bacteria 3845
51 Ga0068859_100086858 3300005617 Bacteria 3175
52 Ga0068864_100003761 3300005618 Bacteria 12521
53 Ga0068864_100022155 3300005618 Bacteria 5326
54 Ga0068864_100078622 3300005618 Bacteria 2887
55 Ga0068866_10013092 3300005718 Bacteria 3630
56 Ga0068851_10055030 3300005834 Bacteria 2027
57 Ga0068863_100006804 3300005841 Bacteria 11206
58 Ga0068863_100087201 3300005841 Unclassified 2957
59 Ga0068863_100115310 3300005841 Bacteria 2560
60 Ga0068858_100019921 3300005842 Bacteria 6272
61 Ga0068860_100037631 3300005843 Bacteria 4631
62 Ga0068860_100057511 3300005843 Bacteria 3697
63 Ga0068860_100058348 3300005843 Bacteria 3669
64 Ga0068860_100065223 3300005843 Bacteria 3458
65 Ga0068862_100070310 3300005844 Bacteria 3022
66 Ga0081455_10040967 3300005937 Unclassified 4080
67 Ga0081455_10089488 3300005937 Bacteria 2498
68 Ga0070715_10000005 3300006163 Bacteria 298716
69 Ga0097621_100005309 3300006237 Bacteria 9073
70 Ga0068871_100003400 3300006358 Bacteria 10935
71 Ga0068871_100008424 3300006358 Bacteria 7414
72 Ga0068871_100030793 3300006358 Bacteria 4228
73 Ga0075428_100012960 3300006844 Bacteria 9272
74 Ga0075428_100067222 3300006844 Bacteria 3924
75 Ga0075428_100076639 3300006844 Bacteria 3650
76 Ga0075428_100140902 3300006844 Bacteria 2622
77 Ga0075428_100146275 3300006844 Bacteria 2568
78 Ga0075430_100011118 3300006846 Bacteria 7630
79 Ga0075430_100032364 3300006846 Bacteria 4439
80 Ga0075430_100048957 3300006846 Bacteria 3568
81 Ga0075433_10187404 3300006852 Unclassified 1841
82 Ga0075434_100034273 3300006871 Bacteria 5013
83 Ga0075434_100161623 3300006871 Unclassified 2259
84 Ga0075429_100131536 3300006880 Unclassified 2189
85 Ga0068865_100024660 3300006881 Bacteria 3948
86 Ga0075436_100007472 3300006914 Bacteria 7474
87 Ga0097620_100028394 3300006931 Bacteria 5608
88 Ga0097620_100059623 3300006931 Bacteria 3845
89 Ga0097620_100086858 3300006931 Bacteria 3175
90 Ga0075435_100000973 3300007076 Bacteria 18103
91 Ga0099794_10001650 3300007265 Bacteria 7879
92 Ga0111539_10005752 3300009094 Bacteria 16034
93 Ga0111539_10007447 3300009094 Bacteria 14023
94 Ga0111539_10030272 3300009094 Bacteria 6582
95 Ga0111539_10080240 3300009094 Bacteria 3838
96 Ga0105247_10001860 3300009101 Bacteria 14771
97 Ga0114129_10100852 3300009147 Bacteria 3995
98 Ga0114129_10107354 3300009147 Bacteria 3856
99 Ga0105243_10001313 3300009148 Bacteria 22196
100 Ga0105243_10016139 3300009148 Bacteria 5649
101 Ga0105241_10026843 3300009174 Bacteria 4286
102 Ga0105242_10000997 3300009176 Bacteria 22197
103 Ga0105242_10020907 3300009176 Bacteria 5133
104 Ga0105242_10056515 3300009176 Bacteria 3212
105 Ga0105248_10002465 3300009177 Bacteria 20556
106 Ga0105248_10031387 3300009177 Bacteria 5939
107 Ga0105238_10003913 3300009551 Bacteria 14791
108 Ga0105249_10005050 3300009553 Bacteria 11372
109 Ga0105249_10122380 3300009553 Bacteria 2474
110 Ga0157370_10050198 3300013104 Bacteria 3988
111 Ga0157369_10066038 3300013105 Bacteria 3892
112 Ga0157374_10035075 3300013296 Bacteria 4588
113 Ga0157378_10001385 3300013297 Bacteria 21788
114 Ga0157378_10009695 3300013297 Bacteria 8388
115 Ga0157378_10017310 3300013297 Bacteria 6322
116 Ga0163162_10002171 3300013306 Bacteria 18420
117 Ga0163162_10061158 3300013306 Bacteria 3804
118 Ga0157375_10023053 3300013308 Bacteria 5738
119 Ga0157375_10063783 3300013308 Bacteria 3667
120 Ga0163163_10002657 3300014325 Bacteria 15123
121 Ga0163163_10013125 3300014325 Bacteria 7569
122 Ga0163163_10022620 3300014325 Bacteria 5958
123 Ga0163163_10120401 3300014325 Bacteria 2658
124 Ga0157380_10011862 3300014326 Bacteria 6302
125 Ga0157380_10066441 3300014326 Bacteria 2900
126 Ga0157380_10181788 3300014326 Bacteria 1848
127 Ga0157377_10000119 3300014745 Bacteria 52305
128 Ga0157379_10014200 3300014968 Bacteria 6985
129 Ga0157376_10076102 3300014969 Bacteria 2867
130 Ga0157376_10270603 3300014969 Unclassified 1596
131 Ga0163161_10047373 3300017792 Bacteria 3104
132 Ga0207697_10026676 3300025315 Bacteria 2362
133 Ga0207682_10039377 3300025893 Unclassified 1921
134 Ga0207710_10021090 3300025900 Bacteria 2790
135 Ga0207647_10022421 3300025904 Bacteria 4194
136 Ga0207685_10000026 3300025905 Bacteria 109892
137 Ga0207643_10042022 3300025908 Bacteria 2577
138 Ga0207684_10017140 3300025910 Bacteria 6217
139 Ga0207684_10053728 3300025910 Bacteria 3419
140 Ga0207684_10204182 3300025910 Bacteria 1705
141 Ga0207707_10004022 3300025912 Bacteria 13047
142 Ga0207663_10016128 3300025916 Bacteria 4135
143 Ga0207662_10002970 3300025918 Bacteria 8632
144 Ga0207662_10017837 3300025918 Bacteria 4019
145 Ga0207652_10086088 3300025921 Bacteria 2755
146 Ga0207646_10004803 3300025922 Bacteria 14503
147 Ga0207646_10011827 3300025922 Bacteria 8425
148 Ga0207646_10199965 3300025922 Unclassified 1805
149 Ga0207644_10011536 3300025931 Bacteria 5850
150 Ga0207706_10054219 3300025933 Bacteria 3539
151 Ga0207706_10109778 3300025933 Bacteria 2427
152 Ga0207686_10000208 3300025934 Bacteria 44632
153 Ga0207709_10000029 3300025935 Bacteria 333327
154 Ga0207691_10016335 3300025940 Bacteria 7047
155 Ga0207711_10044355 3300025941 Bacteria 3796
156 Ga0207711_10088182 3300025941 Bacteria 2723
157 Ga0207689_10010442 3300025942 Bacteria 7995
158 Ga0207689_10020072 3300025942 Bacteria 5626
159 Ga0207689_10047014 3300025942 Bacteria 3565
160 Ga0207712_10002680 3300025961 Bacteria 11380
161 Ga0207712_10034890 3300025961 Bacteria 3412
162 Ga0207712_10156673 3300025961 Unclassified 1765
163 Ga0207640_10070998 3300025981 Bacteria 2344
164 Ga0207658_10072647 3300025986 Bacteria 2609
165 Ga0207703_10038394 3300026035 Bacteria 3821
166 Ga0207708_10000132 3300026075 Bacteria 58749
167 Ga0207708_10015877 3300026075 Bacteria 5654
168 Ga0207708_10032043 3300026075 Bacteria 3991
169 Ga0207641_10002720 3300026088 Bacteria 16134
170 Ga0207648_10038005 3300026089 Bacteria 4237
171 Ga0207648_10052703 3300026089 Unclassified 3557
172 Ga0207648_10136831 3300026089 Bacteria 2158
173 Ga0207676_10008425 3300026095 Bacteria 7330
174 Ga0207676_10023769 3300026095 Bacteria 4527
175 Ga0207675_100003240 3300026118 Bacteria 15957
176 Ga0209588_1003319 3300027671 Unclassified 4454
177 Ga0209588_1005575 3300027671 Unclassified 3615
178 Ga0207428_10000147 3300027907 Bacteria 95314
179 Ga0207428_10002691 3300027907 Bacteria 17705
180 Ga0207428_10023667 3300027907 Bacteria 5161
181 Ga0207428_10096998 3300027907 Bacteria 2282
182 Ga0268266_10007431 3300028379 Bacteria 9889
183 Ga0268265_10008957 3300028380 Bacteria 6768
184 Ga0268265_10012153 3300028380 Bacteria 5831
185 Ga0268264_10086330 3300028381 Bacteria 2696
186 Ga0265760_10019262 3300031090 Bacteria 1966
187 Ga0307416_100361307 3300032002 Bacteria 1474
188 Ga0373932_0002905 3300035112 Bacteria 4229
189 Ga0373924_0022667 3300035410 Bacteria 2456
190 Ga0436365_0970387 3300039437 Bacteria 322356
191 Ga0495586_0042438 3300046535 Bacteria 2450
192 Ga0495621_0069437 3300046539 Unclassified 1295
193 Ga0495635_0030126 3300046663 Bacteria 3772
194 Ga0495658_0040278 3300046683 Bacteria 2597
195 Ga0495672_0023953 3300047320 Bacteria 3940
196 Ga0496100_0063371 3300048903 Bacteria 2443
197 Ga0496104_0296742 3300048907 Bacteria 1528
198 Ga0496105_0000256 3300048908 Bacteria 35835
199 Ga0496109_0001240 3300048912 Bacteria 21155
200 Ga0496114_0002670 3300048917 Bacteria 13618
201 Ga0501038_0033391 3300049574 Bacteria 4534
202 Ga0501040_0029620 3300049576 Bacteria 3697
203 Ga0501041_0087573 3300049577 Unclassified 1922
204 Ga0501043_0086410 3300049579 Unclassified 2465
205 Ga0501047_0000696 3300049581 Bacteria 35135
206 Ga0501067_0007845 3300049583 Bacteria 5933
207 Ga0501068_0000053 3300049584 Bacteria 45390
208 Ga0501069_0041230 3300049585 Unclassified 2551
209 Ga0501072_0000008 3300049588 Bacteria 216818
210 Ga0501074_0001488 3300049590 Bacteria 15769
211 Ga0501074_0016852 3300049590 Bacteria 5302
212 Ga0501074_0078943 3300049590 Unclassified 2362
213 Ga0501076_0084731 3300049592 Unclassified 2546
214 Ga0501077_0052994 3300049593 Unclassified 2575
215 Ga0501079_0002964 3300049741 Bacteria 12411
216 Ga0501080_0005985 3300049742 Bacteria 10899
217 Ga0501044_0178629 3300049823 Unclassified 2090
218 nmdc:mga05p37_192833_c1 3300050507 Bacteria 2473
219 nmdc:mga05p37_50113_c1 3300050507 Bacteria 5134
220 nmdc:mga05p37_57456_c1 3300050507 Bacteria 4792
221 nmdc:mga05p37_94204_c1 3300050507 Bacteria 3690
222 nmdc:mga09592_24830_c2 3300050508 Bacteria 4650
223 nmdc:mga0qj67_17878_c1 3300050509 Bacteria 5396
224 nmdc:mga0qj67_20977_c1 3300050509 Bacteria 5007
225 nmdc:mga0qj67_33933_c1 3300050509 Bacteria 3984
226 nmdc:mga06r32_179400_c1 3300050510 Bacteria 2103
227 nmdc:mga06r32_32742_c1 3300050510 Bacteria 4894
228 nmdc:mga08y16_28350_c1 3300050511 Bacteria 5903
229 nmdc:mga08y16_5471_c1 3300050511 Bacteria 13281
230 nmdc:mga08y16_57216_c1 3300050511 Bacteria 4076
231 nmdc:mga08y16_58_c1 3300050511 Bacteria 94206
232 nmdc:mga08y16_61322_c1 3300050511 Bacteria 3927
233 nmdc:mga0n895_69_c1 3300050512 Bacteria 59717
234 nmdc:mga0rr50_482_c1 3300050513 Bacteria 21145
235 nmdc:mga08x19_951_c1 3300050514 Bacteria 18187
236 nmdc:mga0a205_324985_c1 3300050515 Unclassified 1409
237 Ga0495619_0032859 3300053085 Bacteria 3368
238 Ga0500555_025200 3300053103 Bacteria 1703
239 Ga0501084_0000005 3300054114 Bacteria 237244
240 Ga0501084_0207941 3300054114 Unclassified 1651
241 Ga0501082_0000100 3300060353 Bacteria 66616
242 Ga0501082_0055435 3300060353 Unclassified 3415
243 nmdc:mga08y16_99057_c1
244 Ga0065712_10008387
245 Ga0065712_10107023
246 Ga0065707_10001541
247 Ga0070690_100004751
248 Ga0070690_100005744
249 Ga0070690_100093084
250 Ga0070670_100054542
251 Ga0068869_100043836
252 Ga0070666_10008633
253 Ga0070666_10060611
254 Ga0068868_100071845
255 Ga0070689_100012668
256 Ga0070687_100002814
257 Ga0070668_100035424
258 Ga0070671_100008889
259 Ga0070705_100028600
260 Ga0070700_100000008
261 Ga0070694_100001660
262 Ga0070708_100000441
263 Ga0070708_100077199
264 Ga0070662_100145629
265 Ga0070681_10006962
266 Ga0068867_100073571
267 Ga0070706_100012845
268 Ga0070706_100029037
269 Ga0070707_100028347
270 Ga0070698_100066790
271 Ga0070698_100068714
272 Ga0070698_100072558
273 Ga0070698_100248274
274 Ga0070699_100003798
275 Ga0070699_100013268
276 Ga0070697_100000949
277 Ga0070697_100075866
278 Ga0068853_100010487
279 Ga0070672_100068459
280 Ga0070686_100019975
281 Ga0070686_100025815
282 Ga0070696_100070431
283 Ga0070665_100005567
284 Ga0070704_100037511
285 Ga0068857_100042461
286 Ga0068857_100140857
287 Ga0068854_100001996
288 Ga0068854_100041337
289 Ga0070702_100016912
290 Ga0070702_100030002
291 Ga0068859_100028393
292 Ga0068859_100059627
293 Ga0068859_100086858
294 Ga0068864_100003761
295 Ga0068864_100022155
296 Ga0068864_100078622
297 Ga0068866_10013092
298 Ga0068851_10055030
299 Ga0068863_100006804
300 Ga0068863_100087201
301 Ga0068863_100115310
302 Ga0068858_100019921
303 Ga0068860_100037631
304 Ga0068860_100057511
305 Ga0068860_100058348
306 Ga0068860_100065223
307 Ga0068862_100070310
308 Ga0081455_10040967
309 Ga0081455_10089488
310 Ga0070715_10000005
311 Ga0097621_100005309
312 Ga0068871_100003400
313 Ga0068871_100008424
314 Ga0068871_100030793
315 Ga0075428_100012960
316 Ga0075428_100067222
317 Ga0075428_100076639
318 Ga0075428_100140902
319 Ga0075428_100146275
320 Ga0075430_100011118
321 Ga0075430_100032364
322 Ga0075430_100048957
323 Ga0075433_10187404
324 Ga0075434_100034273
325 Ga0075434_100161623
326 Ga0075429_100131536
327 Ga0068865_100024660
328 Ga0075436_100007472
329 Ga0097620_100028394
330 Ga0097620_100059623
331 Ga0097620_100086858
332 Ga0075435_100000973
333 Ga0099794_10001650
334 Ga0111539_10005752
335 Ga0111539_10007447
336 Ga0111539_10030272
337 Ga0111539_10080240
338 Ga0105247_10001860
339 Ga0114129_10100852
340 Ga0114129_10107354
341 Ga0105243_10001313
342 Ga0105243_10016139
343 Ga0105241_10026843
344 Ga0105242_10000997
345 Ga0105242_10020907
346 Ga0105242_10056515
347 Ga0105248_10002465
348 Ga0105248_10031387
349 Ga0105238_10003913
350 Ga0105249_10005050
351 Ga0105249_10122380
352 Ga0157370_10050198
353 Ga0157369_10066038
354 Ga0157374_10035075
355 Ga0157378_10001385
356 Ga0157378_10009695
357 Ga0157378_10017310
358 Ga0163162_10002171
359 Ga0163162_10061158
360 Ga0157375_10023053
361 Ga0157375_10063783
362 Ga0163163_10002657
363 Ga0163163_10013125
364 Ga0163163_10022620
365 Ga0163163_10120401
366 Ga0157380_10011862
367 Ga0157380_10066441
368 Ga0157380_10181788
369 Ga0157377_10000119
370 Ga0157379_10014200
371 Ga0157376_10076102
372 Ga0157376_10270603
373 Ga0163161_10047373
374 Ga0207697_10026676
375 Ga0207682_10039377
376 Ga0207710_10021090
377 Ga0207647_10022421
378 Ga0207685_10000026
379 Ga0207643_10042022
380 Ga0207684_10017140
381 Ga0207684_10053728
382 Ga0207684_10204182
383 Ga0207707_10004022
384 Ga0207663_10016128
385 Ga0207662_10002970
386 Ga0207662_10017837
387 Ga0207652_10086088
388 Ga0207646_10004803
389 Ga0207646_10011827
390 Ga0207646_10199965
391 Ga0207644_10011536
392 Ga0207706_10054219
393 Ga0207706_10109778
394 Ga0207686_10000208
395 Ga0207709_10000029
396 Ga0207691_10016335
397 Ga0207711_10044355
398 Ga0207711_10088182
399 Ga0207689_10010442
400 Ga0207689_10020072
401 Ga0207689_10047014
402 Ga0207712_10002680
403 Ga0207712_10034890
404 Ga0207712_10156673
405 Ga0207640_10070998
406 Ga0207658_10072647
407 Ga0207703_10038394
408 Ga0207708_10000132
409 Ga0207708_10015877
410 Ga0207708_10032043
411 Ga0207641_10002720
412 Ga0207648_10038005
413 Ga0207648_10052703
414 Ga0207648_10136831
415 Ga0207676_10008425
416 Ga0207676_10023769
417 Ga0207675_100003240
418 Ga0209588_1003319
419 Ga0209588_1005575
420 Ga0207428_10000147
421 Ga0207428_10002691
422 Ga0207428_10023667
423 Ga0207428_10096998
424 Ga0268266_10007431
425 Ga0268265_10008957
426 Ga0268265_10012153
427 Ga0268264_10086330
428 Ga0265760_10019262
429 Ga0307416_100361307
430 Ga0373932_0002905
431 Ga0373924_0022667
432 Ga0436365_0970387
433 Ga0495586_0042438
434 Ga0495621_0069437
435 Ga0495635_0030126
436 Ga0495658_0040278
437 Ga0495672_0023953
438 Ga0496100_0063371
439 Ga0496104_0296742
440 Ga0496105_0000256
441 Ga0496109_0001240
442 Ga0496114_0002670
443 Ga0501038_0033391
444 Ga0501040_0029620
445 Ga0501041_0087573
446 Ga0501043_0086410
447 Ga0501047_0000696
448 Ga0501067_0007845
449 Ga0501068_0000053
450 Ga0501069_0041230
451 Ga0501072_0000008
452 Ga0501074_0001488
453 Ga0501074_0016852
454 Ga0501074_0078943
455 Ga0501076_0084731
456 Ga0501077_0052994
457 Ga0501079_0002964
458 Ga0501080_0005985
459 Ga0501044_0178629
460 nmdc:mga05p37_192833_c1
461 nmdc:mga05p37_50113_c1
462 nmdc:mga05p37_57456_c1
463 nmdc:mga05p37_94204_c1
464 nmdc:mga09592_24830_c2
465 nmdc:mga0qj67_17878_c1
466 nmdc:mga0qj67_20977_c1
467 nmdc:mga0qj67_33933_c1
468 nmdc:mga06r32_179400_c1
469 nmdc:mga06r32_32742_c1
470 nmdc:mga08y16_28350_c1
471 nmdc:mga08y16_5471_c1
472 nmdc:mga08y16_57216_c1
473 nmdc:mga08y16_58_c1
474 nmdc:mga08y16_61322_c1
475 nmdc:mga0n895_69_c1
476 nmdc:mga0rr50_482_c1
477 nmdc:mga08x19_951_c1
478 nmdc:mga0a205_324985_c1
479 Ga0495619_0032859
480 Ga0500555_025200
481 Ga0501084_0000005
482 Ga0501084_0207941
483 Ga0501082_0000100
484 Ga0501082_0055435

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

40

391

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ex5-assembly1.cif.gz_A human s1p transporter spns2 in an outward-facing open conformation (state 4) 0.8105 11 415
8ex6-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1*) 0.7937 11 415
8ex5-assembly1.cif.gz_A human s1p transporter spns2 in an outward-facing open conformation (state 4) 0.7922 11 415
8g92-assembly1.cif.gz_A structure of inhibitor 16d-bound spns2 0.7921 8 415
8ex4-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1) 0.7815 8 415
ID Description Score Start End Superfamily
af_P54219_107_289_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9147 47 162 1.20.1250.20
af_Q8R090_126_283_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8936 34 164 1.20.1250.20
af_Q2G2W1_141_346_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8933 12 164 1.20.1250.20
af_Q54W37_27_219_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8926 7 164 1.20.1250.20
af_Q07904_72_274_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8872 1 162 1.20.1250.20
ID Description Score Start End GO Terms
AF-C0XND7-F1-model_v4 Drug resistance transporter, EmrB/QacA family 0.9016 6 164 GO:0005886
GO:0022857
AF-A0A535TG86-F1-model_v4 MFS transporter 0.8978 7 160 GO:0016020
GO:0022857
AF-A0A704CTW9-F1-model_v4 MFS transporter 0.8965 2 164 GO:0005886
GO:0035435
GO:0061513
AF-A0A2V9RJV5-F1-model_v4 MFS transporter 0.896 18 164 GO:0016020
GO:0022857
AF-A0A5D4FT09-F1-model_v4 deleted 0.8933 2 164

Map