F354489

General Info

Members Datasets Scaffolds Average Seq Length
242 164 484 487

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100011761|Ga0070665_1000117612
Length 534
Sequence VPTVYPLHILLIQALGGKLMVATKTSAGXXXXTVCKLLVGGQWVDSSATEYQPVYNPSTGEVIAKTPLGGKDDLDKACKAAYDAFLLWKEVPVVERARVMFKFKHLMETHYEDIAKCVTREHGKTLPEAKASVQRAIEVVEFACGIPSLMMGESMENIARNVDCETIRHPIGVCAGIAPFNFPAMVPLWMYPIAITCGNSFILKPSERVPLTSMMIADLLKEAGLPDGVFNIVHGGKDCVDAILDHPTIKAISFVGSTTIAKYIYTRGTANGKRVQAAGGAKNHIIIMPDADMEQTVQALQASAFGCAGERCMAGSLALPVGDAAEALIPHLVQASGKMSVGPTDGGSHPDMGPLVSAEHLAKVKSLIEKGEAEGAKVALDGRKIDAAKGKGFFLGPTIFDHAKPDMTIVKEEIFGPVLSVVRVGDLEEALAVGRDCPYGNGAVIYTQSGRSAREFKRHFNAGMIGVNVGVPAPMAWFPFTGWNNSFFGDLHIQGSEGIQFYTQQKMTMTRWFEPKAPKNKDGNFQDPIWKAKT

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
107 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
109 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
110 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
111 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
112 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
113 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
114 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
132 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
162 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
163 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
164 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.52
Metatranscriptomes 0.41
Isolates 2.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.83
Rhizoplane 7.44
Rhizosphere 87.6
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100011761 3300005548 Bacteria 8837
2 JGI25404J52841_10004158 3300003659 Bacteria 2913
3 Ga0058863_10042087 3300004799 Bacteria 1937
4 Ga0065712_10081359 3300005290 Bacteria 3014
5 Ga0070658_10000842 3300005327 Bacteria 26199
6 Ga0070683_100034401 3300005329 Bacteria 4628
7 Ga0070683_100057519 3300005329 Bacteria 3612
8 Ga0070670_100040374 3300005331 Bacteria 4012
9 Ga0070670_100135105 3300005331 Bacteria 2131
10 Ga0070677_10015513 3300005333 Bacteria 2699
11 Ga0070666_10002352 3300005335 Bacteria 11423
12 Ga0070666_10019199 3300005335 Bacteria 4409
13 Ga0070680_100002009 3300005336 Bacteria 14989
14 Ga0070680_100049911 3300005336 Bacteria 3412
15 Ga0068868_100063315 3300005338 Bacteria 2934
16 Ga0068868_100069195 3300005338 Bacteria 2812
17 Ga0070668_100110549 3300005347 Bacteria 2187
18 Ga0070668_100152706 3300005347 Bacteria 1869
19 Ga0070669_100007644 3300005353 Bacteria 7727
20 Ga0070669_100028433 3300005353 Bacteria 4026
21 Ga0070671_100010202 3300005355 Bacteria 7541
22 Ga0070673_100001279 3300005364 Bacteria 14642
23 Ga0070673_100083631 3300005364 Bacteria 2593
24 Ga0070667_100150577 3300005367 Bacteria 2044
25 Ga0070709_10061008 3300005434 Bacteria 2399
26 Ga0070709_10106716 3300005434 Bacteria 1875
27 Ga0070714_100003169 3300005435 Bacteria 12223
28 Ga0070714_100023259 3300005435 Bacteria 5088
29 Ga0070714_100152658 3300005435 Bacteria 2082
30 Ga0070713_100053795 3300005436 Bacteria 3337
31 Ga0070713_100102607 3300005436 Bacteria 2481
32 Ga0070713_100170346 3300005436 Bacteria 1950
33 Ga0070711_100003585 3300005439 Bacteria 9056
34 Ga0070708_100002316 3300005445 Bacteria 14740
35 Ga0070708_100045241 3300005445 Bacteria 3877
36 Ga0070708_100086264 3300005445 Bacteria 2851
37 Ga0070678_100001782 3300005456 Bacteria 11609
38 Ga0070678_100018434 3300005456 Bacteria 4522
39 Ga0070662_100056734 3300005457 Bacteria 2844
40 Ga0070681_10005994 3300005458 Bacteria 11779
41 Ga0070681_10054214 3300005458 Bacteria 3995
42 Ga0070681_10092325 3300005458 Bacteria 2976
43 Ga0068867_100045483 3300005459 Bacteria 3220
44 Ga0070706_100001407 3300005467 Bacteria 25459
45 Ga0070706_100020427 3300005467 Bacteria 6104
46 Ga0070707_100015606 3300005468 Bacteria 7129
47 Ga0070698_100022519 3300005471 Bacteria 6591
48 Ga0070679_100017685 3300005530 Bacteria 6901
49 Ga0070697_100006109 3300005536 Bacteria 9315
50 Ga0070697_100014844 3300005536 Bacteria 6113
51 Ga0070672_100023073 3300005543 Bacteria 4582
52 Ga0070672_100044372 3300005543 Bacteria 3433
53 Ga0070693_100011447 3300005547 Bacteria 4468
54 Ga0070665_100050713 3300005548 Bacteria 4165
55 Ga0070664_100083312 3300005564 Bacteria 2759
56 Ga0068852_100101616 3300005616 Bacteria 2597
57 Ga0068851_10031200 3300005834 Bacteria 2645
58 Ga0068863_100045743 3300005841 Bacteria 4154
59 Ga0068858_100082755 3300005842 Bacteria 2984
60 Ga0081455_10007482 3300005937 Bacteria 11496
61 Ga0081455_10028899 3300005937 Bacteria 5060
62 Ga0081538_10019964 3300005981 Bacteria 4954
63 Ga0081540_1000156 3300005983 Bacteria 70177
64 Ga0081540_1032538 3300005983 Bacteria 2846
65 Ga0081539_10004531 3300005985 Bacteria 15253
66 Ga0081539_10007816 3300005985 Bacteria 9561
67 Ga0070717_10001765 3300006028 Bacteria 15064
68 Ga0075428_100000925 3300006844 Bacteria 31021
69 Ga0075431_100072262 3300006847 Bacteria 3560
70 Ga0075434_100105922 3300006871 Bacteria 2822
71 Ga0075435_100000724 3300007076 Bacteria 20464
72 Ga0105250_10001810 3300009092 Bacteria 11203
73 Ga0111539_10223295 3300009094 Bacteria 2194
74 Ga0105245_10010114 3300009098 Bacteria 8217
75 Ga0105245_10160564 3300009098 Archaea 2132
76 Ga0114129_10016549 3300009147 Bacteria 10501
77 Ga0114129_10037144 3300009147 Bacteria 6877
78 Ga0105243_10000005 3300009148 Bacteria 576265
79 Ga0105238_10041884 3300009551 Bacteria 4638
80 Ga0157369_10055287 3300013105 Bacteria 4285
81 Ga0157369_10055700 3300013105 Bacteria 4268
82 Ga0157374_10087693 3300013296 Bacteria 2963
83 Ga0157378_10230462 3300013297 Bacteria 1765
84 Ga0163162_10210243 3300013306 Bacteria 2075
85 Ga0157372_10038924 3300013307 Bacteria 5248
86 Ga0157372_10109456 3300013307 Bacteria 3164
87 Ga0157372_10175674 3300013307 Bacteria 2479
88 Ga0157376_10146599 3300014969 Bacteria 2124
89 Ga0213874_10000312 3300021377 Bacteria 9601
90 Ga0213876_10060362 3300021384 Bacteria 2000
91 Ga0213875_10021870 3300021388 Bacteria 3061
92 Ga0213871_10007495 3300021441 Bacteria 2364
93 Ga0207680_10020964 3300025903 Bacteria 3529
94 Ga0207645_10015887 3300025907 Bacteria 4988
95 Ga0207705_10000321 3300025909 Bacteria 43665
96 Ga0207684_10055252 3300025910 Bacteria 3369
97 Ga0207707_10021147 3300025912 Bacteria 5686
98 Ga0207695_10089101 3300025913 Bacteria 3103
99 Ga0207693_10005307 3300025915 Bacteria 10763
100 Ga0207663_10009002 3300025916 Bacteria 5256
101 Ga0207660_10002995 3300025917 Bacteria 11061
102 Ga0207660_10064380 3300025917 Bacteria 2646
103 Ga0207652_10001598 3300025921 Bacteria 19947
104 Ga0207646_10006776 3300025922 Bacteria 11789
105 Ga0207659_10171508 3300025926 Bacteria 1712
106 Ga0207687_10015037 3300025927 Bacteria 5070
107 Ga0207700_10030870 3300025928 Bacteria 3800
108 Ga0207664_10025861 3300025929 Bacteria 4428
109 Ga0207664_10144981 3300025929 Bacteria 2013
110 Ga0207706_10055213 3300025933 Bacteria 3504
111 Ga0207709_10000001 3300025935 Bacteria 2228154
112 Ga0207669_10031440 3300025937 Bacteria 2966
113 Ga0207691_10000755 3300025940 Bacteria 31945
114 Ga0207691_10038622 3300025940 Bacteria 4418
115 Ga0207661_10034158 3300025944 Bacteria 3953
116 Ga0207667_10009598 3300025949 Bacteria 11388
117 Ga0207712_10035575 3300025961 Bacteria 3385
118 Ga0207668_10114640 3300025972 Bacteria 2029
119 Ga0207677_10049732 3300026023 Bacteria 2831
120 Ga0207703_10040961 3300026035 Bacteria 3710
121 Ga0207703_10064682 3300026035 Bacteria 3003
122 Ga0207641_10181162 3300026088 Bacteria 1930
123 Ga0207641_10193775 3300026088 Bacteria 1869
124 Ga0207648_10101922 3300026089 Bacteria 2515
125 Ga0207683_10007418 3300026121 Bacteria 9405
126 Ga0265319_1000034 3300028563 Bacteria 117363
127 Ga0265338_10000367 3300028800 Bacteria 80983
128 Ga0265338_10007313 3300028800 Bacteria 13774
129 Ga0265338_10013513 3300028800 Bacteria 9206
130 Ga0265338_10119132 3300028800 Bacteria 2108
131 Ga0265332_10013103 3300031238 Bacteria 3675
132 Ga0265320_10010237 3300031240 Bacteria 5595
133 Ga0265325_10000248 3300031241 Bacteria 38400
134 Ga0265325_10000865 3300031241 Bacteria 21795
135 Ga0265325_10018034 3300031241 Bacteria 3916
136 Ga0265339_10002074 3300031249 Bacteria 14687
137 Ga0265339_10005404 3300031249 Bacteria 8512
138 Ga0265339_10018672 3300031249 Bacteria 4085
139 Ga0265331_10000318 3300031250 Bacteria 52276
140 Ga0265331_10049053 3300031250 Bacteria 2029
141 Ga0265316_10009819 3300031344 Bacteria 8784
142 Ga0265316_10045544 3300031344 Bacteria 3481
143 Ga0307408_100045211 3300031548 Bacteria 3143
144 Ga0265313_10000452 3300031595 Bacteria 43424
145 Ga0265313_10000587 3300031595 Bacteria 37842
146 Ga0265314_10000032 3300031711 Bacteria 259870
147 Ga0265314_10010690 3300031711 Bacteria 7637
148 Ga0265342_10005709 3300031712 Bacteria 9408
149 Ga0265342_10094040 3300031712 Bacteria 1715
150 Ga0307406_10000400 3300031901 Bacteria 25105
151 Ga0307409_100001070 3300031995 Bacteria 12887
152 Ga0307414_10000018 3300032004 Bacteria 237060
153 Ga0373926_0048887 3300035083 Bacteria 1522
154 Ga0373923_0003652 3300035111 Bacteria 4973
155 Ga0373936_0004338 3300035113 Bacteria 5361
156 Ga0373945_0002670 3300035116 Bacteria 5591
157 Ga0373956_0009716 3300035119 Bacteria 3917
158 Ga0373943_0001127 3300035170 Bacteria 11938
159 Ga0373946_0025359 3300035171 Bacteria 2331
160 Ga0373955_0005250 3300035172 Bacteria 5812
161 Ga0373924_0000214 3300035410 Bacteria 17561
162 Ga0373935_0039072 3300035692 Bacteria 2974
163 Ga0373935_0104565 3300035692 Bacteria 1871
164 Ga0373927_0002666 3300035695 Bacteria 13007
165 Ga0373927_0004453 3300035695 Bacteria 9815
166 Ga0373927_0135347 3300035695 Bacteria 1610
167 Ga0373947_0034604 3300035725 Bacteria 2988
168 Ga0373937_0000251 3300036401 Bacteria 52113
169 Ga0373937_0083353 3300036401 Bacteria 2958
170 Ga0373925_0000671 3300037068 Bacteria 32141
171 Ga0373925_0006676 3300037068 Bacteria 8463
172 Ga0373925_0120684 3300037068 Bacteria 2034
173 Ga0373925_0134267 3300037068 Bacteria 1932
174 Ga0373925_0162370 3300037068 Bacteria 1760
175 Ga0395900_0021707 3300037418 Bacteria 6564
176 Ga0395898_0019710 3300037466 Bacteria 6860
177 Ga0395898_0030692 3300037466 Bacteria 5377
178 Ga0395905_0021186 3300037471 Bacteria 6152
179 Ga0395905_0056151 3300037471 Bacteria 3684
180 Ga0436364_0102839 3300037853 Bacteria 4030
181 Ga0436364_0273345 3300037853 Bacteria 2794207
182 Ga0436364_1101624 3300037853 Bacteria 2221
183 Ga0395901_0024083 3300038443 Bacteria 6244
184 Ga0395901_0036598 3300038443 Bacteria 5074
185 Ga0395901_0130772 3300038443 Bacteria 2638
186 Ga0436365_0933295 3300039437 Bacteria 2643
187 Ga0436365_1695035 3300039437 Bacteria 137591
188 Ga0436360_0933633 3300039438 Bacteria 12374
189 Ga0436361_0689609 3300039447 Bacteria 4147
190 Ga0436363_0594293 3300039450 Bacteria 1547
191 Ga0436363_1680007 3300039450 Bacteria 61839
192 Ga0466963_0005503 3300044694 Bacteria 7414
193 Ga0466959_0024963 3300045049 Bacteria 4427
194 Ga0495653_0087742 3300046463 Bacteria 2284
195 Ga0495639_0018239 3300046475 Bacteria 3054
196 Ga0495639_0065948 3300046475 Bacteria 1666
197 Ga0495630_0007617 3300046517 Bacteria 7742
198 Ga0495630_0085729 3300046517 Bacteria 2378
199 Ga0495623_0009838 3300046679 Bacteria 6196
200 Ga0495658_0027042 3300046683 Bacteria 3082
201 Ga0495624_0009359 3300046690 Bacteria 6786
202 Ga0495581_0090803 3300047315 Bacteria 1772
203 Ga0495604_0045092 3300047317 Bacteria 3441
204 Ga0495674_0025370 3300047319 Bacteria 5435
205 Ga0495674_0098993 3300047319 Bacteria 2483
206 Ga0495676_0149528 3300047321 Bacteria 1664
207 Ga0495680_0028390 3300047322 Bacteria 4587
208 Ga0495684_0002041 3300047471 Bacteria 16252
209 Ga0495684_0022707 3300047471 Bacteria 4825
210 Ga0496102_0014248 3300048905 Bacteria 6908
211 Ga0496103_0073102 3300048906 Bacteria 2148
212 Ga0496104_0124183 3300048907 Bacteria 2478
213 Ga0496105_0002492 3300048908 Bacteria 13342
214 Ga0496105_0106103 3300048908 Bacteria 2319
215 Ga0496105_0181088 3300048908 Bacteria 1726
216 Ga0496108_0048284 3300048911 Bacteria 3559
217 Ga0496109_0028068 3300048912 Bacteria 5032
218 Ga0496109_0036721 3300048912 Bacteria 4424
219 Ga0496109_0056216 3300048912 Bacteria 3591
220 Ga0496109_0216077 3300048912 Bacteria 1803
221 Ga0496110_0109085 3300048913 Bacteria 2486
222 Ga0496111_0000940 3300048914 Bacteria 15950
223 Ga0496111_0067887 3300048914 Bacteria 2591
224 Ga0496111_0138570 3300048914 Bacteria 1803
225 Ga0496112_0009382 3300048915 Bacteria 8812
226 Ga0496112_0180970 3300048915 Bacteria 2072
227 Ga0496113_0018305 3300048916 Bacteria 4876
228 Ga0501034_0215718 3300049571 Bacteria 1873
229 Ga0501047_0001812 3300049581 Bacteria 20642
230 Ga0501070_0261321 3300049586 Bacteria 1415
231 Ga0501075_0101263 3300049591 Bacteria 2188
232 Ga0501227_000347 3300049665 Bacteria 9780
233 nmdc:mga05p37_10484_c2 3300050507 Bacteria 9899
234 nmdc:mga05p37_54650_c1 3300050507 Bacteria 4912
235 nmdc:mga0n895_109392_c1 3300050512 Bacteria 2779
236 nmdc:mga0n895_91998_c1 3300050512 Bacteria 3036
237 nmdc:mga0rr50_2799_c1 3300050513 Bacteria 9913
238 2515496984 2515154088 Bacteria 5526283
239 2516087292 2515154202 Bacteria 5471270
240 2889420297 2889415604 Bacteria 8048700
241 8024490592 8024486573 Bacteria 6540512
242 8024491162 8024486573 Bacteria 6540512
243 Ga0070665_100011761
244 JGI25404J52841_10004158
245 Ga0058863_10042087
246 Ga0065712_10081359
247 Ga0070658_10000842
248 Ga0070683_100034401
249 Ga0070683_100057519
250 Ga0070670_100040374
251 Ga0070670_100135105
252 Ga0070677_10015513
253 Ga0070666_10002352
254 Ga0070666_10019199
255 Ga0070680_100002009
256 Ga0070680_100049911
257 Ga0068868_100063315
258 Ga0068868_100069195
259 Ga0070668_100110549
260 Ga0070668_100152706
261 Ga0070669_100007644
262 Ga0070669_100028433
263 Ga0070671_100010202
264 Ga0070673_100001279
265 Ga0070673_100083631
266 Ga0070667_100150577
267 Ga0070709_10061008
268 Ga0070709_10106716
269 Ga0070714_100003169
270 Ga0070714_100023259
271 Ga0070714_100152658
272 Ga0070713_100053795
273 Ga0070713_100102607
274 Ga0070713_100170346
275 Ga0070711_100003585
276 Ga0070708_100002316
277 Ga0070708_100045241
278 Ga0070708_100086264
279 Ga0070678_100001782
280 Ga0070678_100018434
281 Ga0070662_100056734
282 Ga0070681_10005994
283 Ga0070681_10054214
284 Ga0070681_10092325
285 Ga0068867_100045483
286 Ga0070706_100001407
287 Ga0070706_100020427
288 Ga0070707_100015606
289 Ga0070698_100022519
290 Ga0070679_100017685
291 Ga0070697_100006109
292 Ga0070697_100014844
293 Ga0070672_100023073
294 Ga0070672_100044372
295 Ga0070693_100011447
296 Ga0070665_100050713
297 Ga0070664_100083312
298 Ga0068852_100101616
299 Ga0068851_10031200
300 Ga0068863_100045743
301 Ga0068858_100082755
302 Ga0081455_10007482
303 Ga0081455_10028899
304 Ga0081538_10019964
305 Ga0081540_1000156
306 Ga0081540_1032538
307 Ga0081539_10004531
308 Ga0081539_10007816
309 Ga0070717_10001765
310 Ga0075428_100000925
311 Ga0075431_100072262
312 Ga0075434_100105922
313 Ga0075435_100000724
314 Ga0105250_10001810
315 Ga0111539_10223295
316 Ga0105245_10010114
317 Ga0105245_10160564
318 Ga0114129_10016549
319 Ga0114129_10037144
320 Ga0105243_10000005
321 Ga0105238_10041884
322 Ga0157369_10055287
323 Ga0157369_10055700
324 Ga0157374_10087693
325 Ga0157378_10230462
326 Ga0163162_10210243
327 Ga0157372_10038924
328 Ga0157372_10109456
329 Ga0157372_10175674
330 Ga0157376_10146599
331 Ga0213874_10000312
332 Ga0213876_10060362
333 Ga0213875_10021870
334 Ga0213871_10007495
335 Ga0207680_10020964
336 Ga0207645_10015887
337 Ga0207705_10000321
338 Ga0207684_10055252
339 Ga0207707_10021147
340 Ga0207695_10089101
341 Ga0207693_10005307
342 Ga0207663_10009002
343 Ga0207660_10002995
344 Ga0207660_10064380
345 Ga0207652_10001598
346 Ga0207646_10006776
347 Ga0207659_10171508
348 Ga0207687_10015037
349 Ga0207700_10030870
350 Ga0207664_10025861
351 Ga0207664_10144981
352 Ga0207706_10055213
353 Ga0207709_10000001
354 Ga0207669_10031440
355 Ga0207691_10000755
356 Ga0207691_10038622
357 Ga0207661_10034158
358 Ga0207667_10009598
359 Ga0207712_10035575
360 Ga0207668_10114640
361 Ga0207677_10049732
362 Ga0207703_10040961
363 Ga0207703_10064682
364 Ga0207641_10181162
365 Ga0207641_10193775
366 Ga0207648_10101922
367 Ga0207683_10007418
368 Ga0265319_1000034
369 Ga0265338_10000367
370 Ga0265338_10007313
371 Ga0265338_10013513
372 Ga0265338_10119132
373 Ga0265332_10013103
374 Ga0265320_10010237
375 Ga0265325_10000248
376 Ga0265325_10000865
377 Ga0265325_10018034
378 Ga0265339_10002074
379 Ga0265339_10005404
380 Ga0265339_10018672
381 Ga0265331_10000318
382 Ga0265331_10049053
383 Ga0265316_10009819
384 Ga0265316_10045544
385 Ga0307408_100045211
386 Ga0265313_10000452
387 Ga0265313_10000587
388 Ga0265314_10000032
389 Ga0265314_10010690
390 Ga0265342_10005709
391 Ga0265342_10094040
392 Ga0307406_10000400
393 Ga0307409_100001070
394 Ga0307414_10000018
395 Ga0373926_0048887
396 Ga0373923_0003652
397 Ga0373936_0004338
398 Ga0373945_0002670
399 Ga0373956_0009716
400 Ga0373943_0001127
401 Ga0373946_0025359
402 Ga0373955_0005250
403 Ga0373924_0000214
404 Ga0373935_0039072
405 Ga0373935_0104565
406 Ga0373927_0002666
407 Ga0373927_0004453
408 Ga0373927_0135347
409 Ga0373947_0034604
410 Ga0373937_0000251
411 Ga0373937_0083353
412 Ga0373925_0000671
413 Ga0373925_0006676
414 Ga0373925_0120684
415 Ga0373925_0134267
416 Ga0373925_0162370
417 Ga0395900_0021707
418 Ga0395898_0019710
419 Ga0395898_0030692
420 Ga0395905_0021186
421 Ga0395905_0056151
422 Ga0436364_0102839
423 Ga0436364_0273345
424 Ga0436364_1101624
425 Ga0395901_0024083
426 Ga0395901_0036598
427 Ga0395901_0130772
428 Ga0436365_0933295
429 Ga0436365_1695035
430 Ga0436360_0933633
431 Ga0436361_0689609
432 Ga0436363_0594293
433 Ga0436363_1680007
434 Ga0466963_0005503
435 Ga0466959_0024963
436 Ga0495653_0087742
437 Ga0495639_0018239
438 Ga0495639_0065948
439 Ga0495630_0007617
440 Ga0495630_0085729
441 Ga0495623_0009838
442 Ga0495658_0027042
443 Ga0495624_0009359
444 Ga0495581_0090803
445 Ga0495604_0045092
446 Ga0495674_0025370
447 Ga0495674_0098993
448 Ga0495676_0149528
449 Ga0495680_0028390
450 Ga0495684_0002041
451 Ga0495684_0022707
452 Ga0496102_0014248
453 Ga0496103_0073102
454 Ga0496104_0124183
455 Ga0496105_0002492
456 Ga0496105_0106103
457 Ga0496105_0181088
458 Ga0496108_0048284
459 Ga0496109_0028068
460 Ga0496109_0036721
461 Ga0496109_0056216
462 Ga0496109_0216077
463 Ga0496110_0109085
464 Ga0496111_0000940
465 Ga0496111_0067887
466 Ga0496111_0138570
467 Ga0496112_0009382
468 Ga0496112_0180970
469 Ga0496113_0018305
470 Ga0501034_0215718
471 Ga0501047_0001812
472 Ga0501070_0261321
473 Ga0501075_0101263
474 Ga0501227_000347
475 nmdc:mga05p37_10484_c2
476 nmdc:mga05p37_54650_c1
477 nmdc:mga0n895_109392_c1
478 nmdc:mga0n895_91998_c1
479 nmdc:mga0rr50_2799_c1
480 2515496984
481 2516087292
482 2889420297
483 8024490592
484 8024491162

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

43

508

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iym-assembly1.cif.gz_C crystal structure of putative methylmalonate-semialdehyde dehydrogenase from sinorhizobium meliloti 1021 complexed with nad, target 011934 0.9845 1 462
1t90-assembly1.cif.gz_D crystal structure of methylmalonate semialdehyde dehydrogenase from bacillus subtilis 0.9795 1 460
4zz7-assembly2.cif.gz_G crystal structure of methylmalonate-semialdehyde dehydrogenase (dddc) from oceanimonas doudoroffii 0.9782 1 461
4o6r-assembly1.cif.gz_D crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia 0.9567 5 457
8u9b-assembly1.cif.gz_A crystal structure of betaine aldehyde dehydrogenase (betb) from klebsiella aerogenes (apo, p21 form) 0.9562 1 458
ID Description Score Start End Superfamily
1t90B01 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.984 1 229 3.40.605.10
af_O53816_3_249_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9837 3 226 3.40.605.10
af_O53816_250_463_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9811 231 428 3.40.309.10
af_Q54I10_27_272_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9798 1 228 3.40.605.10
af_I1M2L7_83_268_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9779 231 421 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A506XM08-F1-model_v4 Aldehyde dehydrogenase family protein 0.9933 123 242 GO:0004491
GO:0006210
GO:0006574
AF-F0GFN6-F1-model_v4 methylmalonate-semialdehyde dehydrogenase (CoA acylating) (EC 1.2.1.27) 0.9917 181 462 GO:0004491
GO:0006210
GO:0006574
AF-A0A352EA53-F1-model_v4 deleted 0.9901 287 408
AF-A0A3M2VYW1-F1-model_v4 methylmalonate-semialdehyde dehydrogenase (CoA acylating) (EC 1.2.1.27) 0.9893 138 394 GO:0004491
GO:0006210
GO:0006574
AF-A0A143PHK5-F1-model_v4 methylmalonate-semialdehyde dehydrogenase (CoA acylating) (EC 1.2.1.27) 0.9887 2 459 GO:0004491
GO:0006210
GO:0006574

Map