F354443

General Info

Members Datasets Scaffolds Average Seq Length
242 168 484 321

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100387908|Ga0070708_1003879082
Length 348
Sequence MTAIDPLRRLTPVVRLAPAKLNLTLAVVGRRDDGYHTLHSVMAPLALADRLSLAPDPSPEARDTLRVEGFDAGPAADNLVLRAIDATRRALRPHFQQSPPALAIRLDKRIPVAAGLAGGSSDAAATIEGALEAWSATGVLSAAERNALAASIGSDVPFFLAGGAALVEGRGERVTPLRGVHLAAGEGPPGVLLVTAAVAAHTKAVFDAWSGGAMGSPGVAARSSEHFAAEFGSGMSARQLMERAGVLAASNDLLPAAAAVVDGLVALRRALARLLARPIGLSGSGPTLWALYPSTDDAELAAASVRAAVGTGFIAAPGDEPPFVAATTFLIAADEPITLDPIDERSRA

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
99 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
100 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
103 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
104 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
105 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.83
Nodule 0
Rhizoplane 8.26
Rhizosphere 90.08
Stem 0
Stem Tuber 0
Unclassified 8.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100387908 3300005445 Bacteria 1317
2 rootH1_10091182 3300003316 Bacteria 1325
3 Ga0070676_10057334 3300005328 Bacteria 2305
4 Ga0070683_100153634 3300005329 Bacteria 2182
5 Ga0070690_100005989 3300005330 Bacteria 6869
6 Ga0070670_100008236 3300005331 Bacteria 8879
7 Ga0068869_100009229 3300005334 Bacteria 6392
8 Ga0070682_100096815 3300005337 Bacteria 1941
9 Ga0070660_100176251 3300005339 Unclassified 1729
10 Ga0070689_100015571 3300005340 Bacteria 5548
11 Ga0070687_100013926 3300005343 Bacteria 3599
12 Ga0070692_10004493 3300005345 Bacteria 5835
13 Ga0070675_100143723 3300005354 Bacteria 2041
14 Ga0070674_100032498 3300005356 Bacteria 3465
15 Ga0070673_100039611 3300005364 Bacteria 3608
16 Ga0070688_100094196 3300005365 Bacteria 1963
17 Ga0070701_10054620 3300005438 Bacteria 2083
18 Ga0070705_100022797 3300005440 Bacteria 3350
19 Ga0070705_100080975 3300005440 Bacteria 1994
20 Ga0070700_100009191 3300005441 Bacteria 5418
21 Ga0070694_100224545 3300005444 Unclassified 1410
22 Ga0070708_100012584 3300005445 Bacteria 6908
23 Ga0070708_100088323 3300005445 Bacteria 2819
24 Ga0070678_100005052 3300005456 Bacteria 7571
25 Ga0070678_100221490 3300005456 Bacteria 1573
26 Ga0070662_100001489 3300005457 Bacteria 14413
27 Ga0070685_10011745 3300005466 Bacteria 4591
28 Ga0070706_100001506 3300005467 Bacteria 24455
29 Ga0070706_100003653 3300005467 Bacteria 15057
30 Ga0070706_100020608 3300005467 Bacteria 6075
31 Ga0070707_100000802 3300005468 Bacteria 30993
32 Ga0070707_100001085 3300005468 Bacteria 26916
33 Ga0070707_100044018 3300005468 Bacteria 4273
34 Ga0070707_100060051 3300005468 Bacteria 3646
35 Ga0070707_100090212 3300005468 Bacteria 2967
36 Ga0070698_100008452 3300005471 Bacteria 11122
37 Ga0070698_100039727 3300005471 Bacteria 4840
38 Ga0070699_100000974 3300005518 Bacteria 26705
39 Ga0070679_100266252 3300005530 Bacteria 1669
40 Ga0070697_100032381 3300005536 Bacteria 4207
41 Ga0070697_100070103 3300005536 Bacteria 2873
42 Ga0070697_100129209 3300005536 Bacteria 2118
43 Ga0068853_100253428 3300005539 Unclassified 1616
44 Ga0068853_100281520 3300005539 Unclassified 1533
45 Ga0070672_100121901 3300005543 Bacteria 2135
46 Ga0070686_100028593 3300005544 Bacteria 3383
47 Ga0070686_100062465 3300005544 Bacteria 2410
48 Ga0070695_100035737 3300005545 Bacteria 3122
49 Ga0070696_100009907 3300005546 Bacteria 6375
50 Ga0070696_100058605 3300005546 Bacteria 2689
51 Ga0070693_100056947 3300005547 Bacteria 2258
52 Ga0070704_100077088 3300005549 Unclassified 2441
53 Ga0070704_100191706 3300005549 Unclassified 1643
54 Ga0070664_100179564 3300005564 Bacteria 1881
55 Ga0068857_100049481 3300005577 Bacteria 3728
56 Ga0070702_100003443 3300005615 Bacteria 7080
57 Ga0070702_100069350 3300005615 Bacteria 2077
58 Ga0068864_100002582 3300005618 Bacteria 14956
59 Ga0068864_100003398 3300005618 Bacteria 13154
60 Ga0068864_100126733 3300005618 Bacteria 2289
61 Ga0068861_100065142 3300005719 Bacteria 2806
62 Ga0068870_10037183 3300005840 Bacteria 2508
63 Ga0068863_100043605 3300005841 Bacteria 4257
64 Ga0068860_100053722 3300005843 Bacteria 3830
65 Ga0068860_100071888 3300005843 Bacteria 3287
66 Ga0068862_100032602 3300005844 Bacteria 4402
67 Ga0068862_100068272 3300005844 Bacteria 3066
68 Ga0081539_10008675 3300005985 Bacteria 8755
69 Ga0081539_10011081 3300005985 Bacteria 7204
70 Ga0075365_10038096 3300006038 Bacteria 3123
71 Ga0075428_100006580 3300006844 Bacteria 12925
72 Ga0075433_10103148 3300006852 Bacteria 2526
73 Ga0075429_100206244 3300006880 Bacteria 1722
74 Ga0075435_100089542 3300007076 Bacteria 2537
75 Ga0111539_10024002 3300009094 Bacteria 7490
76 Ga0111539_10116000 3300009094 Bacteria 3140
77 Ga0105245_10030270 3300009098 Bacteria 4786
78 Ga0105245_10083244 3300009098 Bacteria 2928
79 Ga0105245_10376400 3300009098 Bacteria 1413
80 Ga0114129_10000236 3300009147 Bacteria 61673
81 Ga0114129_10041231 3300009147 Bacteria 6506
82 Ga0114129_10136792 3300009147 Bacteria 3361
83 Ga0114129_10217675 3300009147 Bacteria 2578
84 Ga0105243_10007511 3300009148 Bacteria 8379
85 Ga0105243_10075720 3300009148 Bacteria 2732
86 Ga0105243_10208382 3300009148 Bacteria 1719
87 Ga0105242_10149101 3300009176 Bacteria 2038
88 Ga0105249_10006625 3300009553 Bacteria 10077
89 Ga0105249_10042509 3300009553 Bacteria 4134
90 Ga0105239_10161696 3300010375 Bacteria 2502
91 Ga0105246_10025281 3300011119 Bacteria 3870
92 Ga0105246_10115980 3300011119 Bacteria 1976
93 Ga0157378_10134468 3300013297 Bacteria 2291
94 Ga0157375_10019542 3300013308 Bacteria 6165
95 Ga0163163_10044950 3300014325 Bacteria 4334
96 Ga0163163_10078645 3300014325 Bacteria 3295
97 Ga0163163_10154312 3300014325 Bacteria 2340
98 Ga0163163_10212331 3300014325 Unclassified 1984
99 Ga0163163_10320396 3300014325 Bacteria 1604
100 Ga0182008_10041729 3300014497 Bacteria 2288
101 Ga0157377_10000477 3300014745 Bacteria 17247
102 Ga0157377_10030184 3300014745 Bacteria 2934
103 Ga0157379_10026399 3300014968 Bacteria 5170
104 Ga0157379_10110560 3300014968 Bacteria 2468
105 Ga0163161_10094641 3300017792 Bacteria 2215
106 Ga0207688_10010524 3300025901 Bacteria 5031
107 Ga0207645_10048443 3300025907 Bacteria 2714
108 Ga0207643_10004287 3300025908 Bacteria 7670
109 Ga0207684_10000870 3300025910 Bacteria 34476
110 Ga0207684_10008797 3300025910 Bacteria 8963
111 Ga0207684_10015983 3300025910 Bacteria 6448
112 Ga0207684_10027047 3300025910 Bacteria 4892
113 Ga0207662_10000302 3300025918 Bacteria 22724
114 Ga0207652_10161265 3300025921 Bacteria 2010
115 Ga0207646_10002298 3300025922 Bacteria 22695
116 Ga0207646_10006239 3300025922 Bacteria 12386
117 Ga0207646_10009324 3300025922 Bacteria 9706
118 Ga0207650_10061184 3300025925 Bacteria 2811
119 Ga0207659_10071414 3300025926 Bacteria 2535
120 Ga0207687_10067044 3300025927 Unclassified 2552
121 Ga0207687_10093734 3300025927 Bacteria 2196
122 Ga0207644_10216415 3300025931 Bacteria 1517
123 Ga0207690_10035515 3300025932 Bacteria 3220
124 Ga0207706_10010926 3300025933 Bacteria 8280
125 Ga0207709_10099747 3300025935 Bacteria 1917
126 Ga0207704_10176058 3300025938 Bacteria 1540
127 Ga0207691_10143407 3300025940 Bacteria 2104
128 Ga0207689_10086445 3300025942 Bacteria 2577
129 Ga0207661_10167560 3300025944 Bacteria 1910
130 Ga0207712_10017988 3300025961 Bacteria 4598
131 Ga0207712_10078272 3300025961 Bacteria 2399
132 Ga0207658_10057982 3300025986 Bacteria 2880
133 Ga0207703_10287748 3300026035 Unclassified 1495
134 Ga0207678_10012627 3300026067 Bacteria 7420
135 Ga0207708_10005722 3300026075 Bacteria 9189
136 Ga0207708_10038800 3300026075 Bacteria 3629
137 Ga0207641_10085876 3300026088 Bacteria 2743
138 Ga0207648_10002453 3300026089 Bacteria 19935
139 Ga0207676_10010940 3300026095 Bacteria 6476
140 Ga0207676_10057844 3300026095 Bacteria 3056
141 Ga0207676_10429827 3300026095 Bacteria 1240
142 Ga0207674_10009899 3300026116 Bacteria 10845
143 Ga0207675_100053127 3300026118 Bacteria 3781
144 Ga0207675_100300662 3300026118 Bacteria 1563
145 Ga0207683_10068884 3300026121 Bacteria 3124
146 Ga0207698_10016390 3300026142 Bacteria 4992
147 Ga0268265_10076092 3300028380 Bacteria 2632
148 Ga0268265_10146300 3300028380 Bacteria 1986
149 Ga0265326_10001281 3300028558 Bacteria 8924
150 Ga0265319_1003899 3300028563 Bacteria 7597
151 Ga0265334_10001688 3300028573 Bacteria 10550
152 Ga0265334_10058466 3300028573 Unclassified 1458
153 Ga0265338_10101846 3300028800 Bacteria 2337
154 Ga0265330_10007597 3300031235 Bacteria 5271
155 Ga0265320_10013345 3300031240 Bacteria 4729
156 Ga0265325_10031627 3300031241 Bacteria 2830
157 Ga0265340_10009255 3300031247 Bacteria 5290
158 Ga0265331_10057842 3300031250 Bacteria 1837
159 Ga0265316_10131568 3300031344 Unclassified 1884
160 Ga0265316_10175998 3300031344 Bacteria 1594
161 Ga0265314_10000951 3300031711 Bacteria 34010
162 Ga0265342_10139685 3300031712 Bacteria 1352
163 Ga0307405_10037358 3300031731 Bacteria 2918
164 Ga0307406_10144802 3300031901 Bacteria 1687
165 Ga0307409_100037888 3300031995 Bacteria 3559
166 Ga0307409_100079046 3300031995 Bacteria 2649
167 Ga0307416_100173669 3300032002 Bacteria 2010
168 Ga0307414_10139167 3300032004 Bacteria 1898
169 Ga0307415_100052359 3300032126 Bacteria 2775
170 Ga0373945_0135426 3300035116 Bacteria 990
171 Ga0373947_0140902 3300035725 Bacteria 1546
172 Ga0451853_2914262 3300041512 Bacteria 1976
173 Ga0495629_0138683 3300046459 Bacteria 1693
174 Ga0495630_0053628 3300046517 Bacteria 3020
175 Ga0495634_0157624 3300046642 Bacteria 1433
176 Ga0495674_0107257 3300047319 Bacteria 2371
177 Ga0495680_0222714 3300047322 Bacteria 1346
178 Ga0496101_0093719 3300048904 Bacteria 2237
179 Ga0496102_0185690 3300048905 Unclassified 1959
180 Ga0496103_0020538 3300048906 Bacteria 3968
181 Ga0496104_0046974 3300048907 Bacteria 4068
182 Ga0496104_0154784 3300048907 Bacteria 2200
183 Ga0496104_0181504 3300048907 Bacteria 2015
184 Ga0496105_0062740 3300048908 Bacteria 3067
185 Ga0496107_0067286 3300048910 Bacteria 2599
186 Ga0496108_0002032 3300048911 Bacteria 16203
187 Ga0496108_0029392 3300048911 Bacteria 4550
188 Ga0496108_0069280 3300048911 Bacteria 2976
189 Ga0496110_0094433 3300048913 Bacteria 2678
190 Ga0496111_0004110 3300048914 Bacteria 9137
191 Ga0496111_0105967 3300048914 Bacteria 2069
192 Ga0496111_0107171 3300048914 Bacteria 2057
193 Ga0496112_0000007 3300048915 Bacteria 338850
194 Ga0496112_0022541 3300048915 Bacteria 6001
195 Ga0496113_0082140 3300048916 Bacteria 2471
196 Ga0496113_0228226 3300048916 Bacteria 1484
197 Ga0496114_0168811 3300048917 Bacteria 1906
198 Ga0501031_0014648 3300049568 Bacteria 5097
199 Ga0501032_0080921 3300049569 Bacteria 2161
200 Ga0501036_0029277 3300049572 Bacteria 4654
201 Ga0501037_0123687 3300049573 Bacteria 1858
202 Ga0501038_0023396 3300049574 Bacteria 5523
203 Ga0501039_0224009 3300049575 Unclassified 1478
204 Ga0501041_0027994 3300049577 Bacteria 3399
205 Ga0501046_0034163 3300049580 Bacteria 4106
206 Ga0501048_0048544 3300049582 Bacteria 3027
207 Ga0501048_0093470 3300049582 Unclassified 2121
208 Ga0501068_0245281 3300049584 Unclassified 1141
209 Ga0501069_0009827 3300049585 Bacteria 5058
210 Ga0501071_0024320 3300049587 Bacteria 4236
211 Ga0501072_0105414 3300049588 Bacteria 2242
212 Ga0501072_0211705 3300049588 Bacteria 1545
213 Ga0501074_0014074 3300049590 Bacteria 5816
214 Ga0501075_0028560 3300049591 Bacteria 4118
215 Ga0501075_0047660 3300049591 Bacteria 3220
216 Ga0501075_0199113 3300049591 Bacteria 1528
217 Ga0501076_0010363 3300049592 Bacteria 6913
218 Ga0501076_0026288 3300049592 Bacteria 4507
219 Ga0501077_0302222 3300049593 Bacteria 1019
220 Ga0501079_0023275 3300049741 Bacteria 4755
221 Ga0501079_0085547 3300049741 Bacteria 2440
222 Ga0501080_0021597 3300049742 Bacteria 5958
223 Ga0501081_0036987 3300049743 Bacteria 3330
224 Ga0501083_0069066 3300049744 Bacteria 2351
225 Ga0501083_0094999 3300049744 Unclassified 1968
226 Ga0501035_0082057 3300049822 Bacteria 2845
227 Ga0501035_0377957 3300049822 Unclassified 1182
228 Ga0501044_0452906 3300049823 Bacteria 1190
229 Ga0501045_0046188 3300049824 Bacteria 3171
230 nmdc:mga0yw44_88855_c1 3300050492 Bacteria 1949
231 nmdc:mga05p37_238410_c1 3300050507 Bacteria 2188
232 nmdc:mga05p37_641_c1 3300050507 Bacteria 38742
233 nmdc:mga09592_116364_c1 3300050508 Bacteria 2294
234 nmdc:mga06r32_128750_c1 3300050510 Bacteria 2501
235 nmdc:mga0a205_55634_c1 3300050515 Bacteria 3821
236 Ga0495595_0102112 3300053084 Unclassified 1385
237 Ga0501084_0022319 3300054114 Bacteria 5282
238 Ga0501084_0045417 3300054114 Bacteria 3678
239 Ga0501084_0208225 3300054114 Unclassified 1650
240 Ga0501082_0099180 3300060353 Bacteria 2518
241 Ga0501082_0141835 3300060353 Unclassified 2085
242 Ga0530510_0001239 3300061734 Bacteria 17030
243 Ga0070708_100387908
244 rootH1_10091182
245 Ga0070676_10057334
246 Ga0070683_100153634
247 Ga0070690_100005989
248 Ga0070670_100008236
249 Ga0068869_100009229
250 Ga0070682_100096815
251 Ga0070660_100176251
252 Ga0070689_100015571
253 Ga0070687_100013926
254 Ga0070692_10004493
255 Ga0070675_100143723
256 Ga0070674_100032498
257 Ga0070673_100039611
258 Ga0070688_100094196
259 Ga0070701_10054620
260 Ga0070705_100022797
261 Ga0070705_100080975
262 Ga0070700_100009191
263 Ga0070694_100224545
264 Ga0070708_100012584
265 Ga0070708_100088323
266 Ga0070678_100005052
267 Ga0070678_100221490
268 Ga0070662_100001489
269 Ga0070685_10011745
270 Ga0070706_100001506
271 Ga0070706_100003653
272 Ga0070706_100020608
273 Ga0070707_100000802
274 Ga0070707_100001085
275 Ga0070707_100044018
276 Ga0070707_100060051
277 Ga0070707_100090212
278 Ga0070698_100008452
279 Ga0070698_100039727
280 Ga0070699_100000974
281 Ga0070679_100266252
282 Ga0070697_100032381
283 Ga0070697_100070103
284 Ga0070697_100129209
285 Ga0068853_100253428
286 Ga0068853_100281520
287 Ga0070672_100121901
288 Ga0070686_100028593
289 Ga0070686_100062465
290 Ga0070695_100035737
291 Ga0070696_100009907
292 Ga0070696_100058605
293 Ga0070693_100056947
294 Ga0070704_100077088
295 Ga0070704_100191706
296 Ga0070664_100179564
297 Ga0068857_100049481
298 Ga0070702_100003443
299 Ga0070702_100069350
300 Ga0068864_100002582
301 Ga0068864_100003398
302 Ga0068864_100126733
303 Ga0068861_100065142
304 Ga0068870_10037183
305 Ga0068863_100043605
306 Ga0068860_100053722
307 Ga0068860_100071888
308 Ga0068862_100032602
309 Ga0068862_100068272
310 Ga0081539_10008675
311 Ga0081539_10011081
312 Ga0075365_10038096
313 Ga0075428_100006580
314 Ga0075433_10103148
315 Ga0075429_100206244
316 Ga0075435_100089542
317 Ga0111539_10024002
318 Ga0111539_10116000
319 Ga0105245_10030270
320 Ga0105245_10083244
321 Ga0105245_10376400
322 Ga0114129_10000236
323 Ga0114129_10041231
324 Ga0114129_10136792
325 Ga0114129_10217675
326 Ga0105243_10007511
327 Ga0105243_10075720
328 Ga0105243_10208382
329 Ga0105242_10149101
330 Ga0105249_10006625
331 Ga0105249_10042509
332 Ga0105239_10161696
333 Ga0105246_10025281
334 Ga0105246_10115980
335 Ga0157378_10134468
336 Ga0157375_10019542
337 Ga0163163_10044950
338 Ga0163163_10078645
339 Ga0163163_10154312
340 Ga0163163_10212331
341 Ga0163163_10320396
342 Ga0182008_10041729
343 Ga0157377_10000477
344 Ga0157377_10030184
345 Ga0157379_10026399
346 Ga0157379_10110560
347 Ga0163161_10094641
348 Ga0207688_10010524
349 Ga0207645_10048443
350 Ga0207643_10004287
351 Ga0207684_10000870
352 Ga0207684_10008797
353 Ga0207684_10015983
354 Ga0207684_10027047
355 Ga0207662_10000302
356 Ga0207652_10161265
357 Ga0207646_10002298
358 Ga0207646_10006239
359 Ga0207646_10009324
360 Ga0207650_10061184
361 Ga0207659_10071414
362 Ga0207687_10067044
363 Ga0207687_10093734
364 Ga0207644_10216415
365 Ga0207690_10035515
366 Ga0207706_10010926
367 Ga0207709_10099747
368 Ga0207704_10176058
369 Ga0207691_10143407
370 Ga0207689_10086445
371 Ga0207661_10167560
372 Ga0207712_10017988
373 Ga0207712_10078272
374 Ga0207658_10057982
375 Ga0207703_10287748
376 Ga0207678_10012627
377 Ga0207708_10005722
378 Ga0207708_10038800
379 Ga0207641_10085876
380 Ga0207648_10002453
381 Ga0207676_10010940
382 Ga0207676_10057844
383 Ga0207676_10429827
384 Ga0207674_10009899
385 Ga0207675_100053127
386 Ga0207675_100300662
387 Ga0207683_10068884
388 Ga0207698_10016390
389 Ga0268265_10076092
390 Ga0268265_10146300
391 Ga0265326_10001281
392 Ga0265319_1003899
393 Ga0265334_10001688
394 Ga0265334_10058466
395 Ga0265338_10101846
396 Ga0265330_10007597
397 Ga0265320_10013345
398 Ga0265325_10031627
399 Ga0265340_10009255
400 Ga0265331_10057842
401 Ga0265316_10131568
402 Ga0265316_10175998
403 Ga0265314_10000951
404 Ga0265342_10139685
405 Ga0307405_10037358
406 Ga0307406_10144802
407 Ga0307409_100037888
408 Ga0307409_100079046
409 Ga0307416_100173669
410 Ga0307414_10139167
411 Ga0307415_100052359
412 Ga0373945_0135426
413 Ga0373947_0140902
414 Ga0451853_2914262
415 Ga0495629_0138683
416 Ga0495630_0053628
417 Ga0495634_0157624
418 Ga0495674_0107257
419 Ga0495680_0222714
420 Ga0496101_0093719
421 Ga0496102_0185690
422 Ga0496103_0020538
423 Ga0496104_0046974
424 Ga0496104_0154784
425 Ga0496104_0181504
426 Ga0496105_0062740
427 Ga0496107_0067286
428 Ga0496108_0002032
429 Ga0496108_0029392
430 Ga0496108_0069280
431 Ga0496110_0094433
432 Ga0496111_0004110
433 Ga0496111_0105967
434 Ga0496111_0107171
435 Ga0496112_0000007
436 Ga0496112_0022541
437 Ga0496113_0082140
438 Ga0496113_0228226
439 Ga0496114_0168811
440 Ga0501031_0014648
441 Ga0501032_0080921
442 Ga0501036_0029277
443 Ga0501037_0123687
444 Ga0501038_0023396
445 Ga0501039_0224009
446 Ga0501041_0027994
447 Ga0501046_0034163
448 Ga0501048_0048544
449 Ga0501048_0093470
450 Ga0501068_0245281
451 Ga0501069_0009827
452 Ga0501071_0024320
453 Ga0501072_0105414
454 Ga0501072_0211705
455 Ga0501074_0014074
456 Ga0501075_0028560
457 Ga0501075_0047660
458 Ga0501075_0199113
459 Ga0501076_0010363
460 Ga0501076_0026288
461 Ga0501077_0302222
462 Ga0501079_0023275
463 Ga0501079_0085547
464 Ga0501080_0021597
465 Ga0501081_0036987
466 Ga0501083_0069066
467 Ga0501083_0094999
468 Ga0501035_0082057
469 Ga0501035_0377957
470 Ga0501044_0452906
471 Ga0501045_0046188
472 nmdc:mga0yw44_88855_c1
473 nmdc:mga05p37_238410_c1
474 nmdc:mga05p37_641_c1
475 nmdc:mga09592_116364_c1
476 nmdc:mga06r32_128750_c1
477 nmdc:mga0a205_55634_c1
478 Ga0495595_0102112
479 Ga0501084_0022319
480 Ga0501084_0045417
481 Ga0501084_0208225
482 Ga0501082_0099180
483 Ga0501082_0141835
484 Ga0530510_0001239

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

78

163

0.9

PF08544

GHMP_kinases_C

GHMP kinases C terminal

227

311

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ed4-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to atp 0.8233 1 322
4emd-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 0.8209 8 322
2v2q-assembly1.cif.gz_A ispe in complex with ligand 0.8157 8 323
2v2q-assembly1.cif.gz_A ispe in complex with ligand 0.8129 8 323
3pyf-assembly1.cif.gz_A mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with amp-pnp 0.8119 11 322
ID Description Score Start End Superfamily
af_Q8S2G0_72_245_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8962 8 174 3.30.230.10
2v2qB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8557 9 174 3.30.230.10
2v2qB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8353 9 174 3.30.230.10
af_Q2G0S8_1_157_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8342 10 174 3.30.230.10
af_Q2G0S8_1_157_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8244 10 174 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A3L7WGA6-F1-model_v4 Multifunctional fusion protein [Includes: Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase); 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)] 0.9415 9 324 GO:0003723
GO:0005524
GO:0005737
GO:0016114
GO:0019288
GO:0050515
GO:0052908
AF-A0A524J541-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9393 2 332 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A524J541-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9228 2 332 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A535P7V2-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 0.9216 1 307 GO:0005524
GO:0016114
GO:0050515
AF-A0A522AVF4-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9171 1 332 GO:0005524
GO:0016114
GO:0019288
GO:0050515

Map