F354204

General Info

Members Datasets Scaffolds Average Seq Length
241 175 181 503

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221566|2643846441
Length 502
Sequence LRGITKRFGSLVANDHIDLVVQPGEIHALLGENGAGKSTLMNVLYGLYQADEGEILLDDVVQHFRGPGDAMAAGIGMVHQHFMLIPVFTVAENVMLGHEDTKGIGALDLNKARQHVREVAQRFGFQVDPDAIVGDLPVGVQQRVEIIKALSRDAKVLVFDEPTAVLTPQETDELMAIMRQLRDEGTSIVFITHKLREVRAVADRITVIRLGKVVGEASPTASNAELASLMVGRAVELTVHKDAPKIGAGAGLSVKGLRVLTPTGAVVVDDVSFDVRPGEVVALAGVQGNGQTELVEAIVGLADRVTGSISLDGVELVGKSVRRILDEGVGFVPEDRTEDGLVGGFSVAENLILDRSGDSAFVRGGTVRRTVLDEFAKARITEYDIRTQGPDVPAGTLSGGNQQKVVIAREMSRDLKLLVAAQPTRGVDVGSIEFIHTRIVETRDAGVPVLVVSTELDEVAALADRIAVMYRGAIVGIVPGDTSRDVLGLMMAGETPGDGVAA

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221549 Agromyces sp. Root1464 Isolate Unclassified
4 2643221553 Microbacterium sp. Root553 Isolate Unclassified
5 2643221566 Microbacterium sp. Root166 Isolate Unclassified
6 2643221572 Leifsonia sp. Root60 Isolate Unclassified
7 2643221575 Microbacterium sp. Root61 Isolate Unclassified
8 2643221597 Microbacterium sp. Root180 Isolate Unclassified
9 2643221616 Leifsonia sp. Root227 Isolate Unclassified
10 2643221619 Agromyces sp. Root81 Isolate Unclassified
11 2643221630 Microbacterium sp. Root322 Isolate Unclassified
12 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
13 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
14 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
15 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
16 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
17 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
18 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
19 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
20 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
21 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
22 2773857759 Microbacterium sp. 1294 Isolate Unclassified
23 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
24 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
25 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
26 2808606372 Agromyces sp. 23-23 Isolate Unclassified
27 2808606394 Promicromonospora sp. C35 Isolate Unclassified
28 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
29 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
30 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
31 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
32 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
33 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
34 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
35 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
36 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
37 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
38 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
39 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
40 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
41 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
42 2919395869 Microbacterium resistens 2980 Isolate Unclassified
43 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
44 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
45 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
46 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
47 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
48 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
49 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
50 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
51 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
52 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
53 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
54 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
55 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
56 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
57 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
58 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
59 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
60 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
61 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
62 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
63 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
64 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
67 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
68 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
69 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
70 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
71 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
72 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
79 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
83 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
90 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
111 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
112 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
118 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
119 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
120 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
124 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
127 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
165 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
166 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
167 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
171 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
172 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
173 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
174 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere
175 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.27
Metatranscriptomes 0.83
Isolates 24.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.88
Nodule 0
Rhizoplane 1.66
Rhizosphere 58.51
Stem 0
Stem Tuber 0.41
Unclassified 31.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10001937 3300001979 Bacteria 9480
2 JGI25154J39366_1001062 3300002738 Bacteria 10874
3 JGI25164J39214_1000735 3300002772 Bacteria 12232
4 JGI25165J46597_1000044 3300003214 Bacteria 263289
5 Ga0006562J51391_1058820 3300003578 Bacteria 8750
6 Ga0006562J51391_1058821 3300003578 Bacteria 10530
7 Ga0070658_10017415 3300005327 Bacteria 5749
8 Ga0070658_10043307 3300005327 Bacteria 3636
9 Ga0070658_10111696 3300005327 Bacteria 2265
10 Ga0070671_100109952 3300005355 Bacteria 2315
11 Ga0070659_100000308 3300005366 Bacteria 38002
12 Ga0070706_100002951 3300005467 Bacteria 16881
13 Ga0070698_100151576 3300005471 Bacteria 2266
14 Ga0068855_100197395 3300005563 Bacteria 2267
15 Ga0068857_100034939 3300005577 Bacteria 4448
16 Ga0068859_100089456 3300005617 Bacteria 3129
17 Ga0068864_100016565 3300005618 Bacteria 6136
18 Ga0068851_10000001 3300005834 Bacteria 495512
19 Ga0068858_100000016 3300005842 Bacteria 193130
20 Ga0075365_10014515 3300006038 Bacteria 4740
21 Ga0075364_10003740 3300006051 Bacteria 8689
22 Ga0075364_10006352 3300006051 Bacteria 6943
23 Ga0075364_10020250 3300006051 Bacteria 4184
24 Ga0097620_100089457 3300006931 Bacteria 3129
25 Ga0105244_10014278 3300009036 Bacteria 4599
26 Ga0105240_10080844 3300009093 Bacteria 3996
27 Ga0105245_10016397 3300009098 Bacteria 6463
28 Ga0105243_10122365 3300009148 Bacteria 2196
29 Ga0105248_10017960 3300009177 Bacteria 7807
30 Ga0105237_10001702 3300009545 Bacteria 28464
31 Ga0105238_10001154 3300009551 Bacteria 26671
32 Ga0105249_10177763 3300009553 Bacteria 2068
33 Ga0157369_10041138 3300013105 Bacteria 5045
34 Ga0171462_1001 3300013250 Bacteria 1135406
35 Ga0157380_10100184 3300014326 Bacteria 2411
36 Ga0207427_100077 3300025231 Bacteria 149591
37 Ga0209437_100530 3300025233 Bacteria 26486
38 Ga0209646_1000209 3300025246 Bacteria 66608
39 Ga0209148_1000918 3300025254 Bacteria 19764
40 Ga0209233_1000014 3300025261 Bacteria 996641
41 Ga0207656_10000002 3300025321 Bacteria 792178
42 Ga0207655_1018149 3300025728 Bacteria 3751
43 Ga0207688_10034670 3300025901 Bacteria 2796
44 Ga0207705_10069685 3300025909 Bacteria 2547
45 Ga0207705_10086060 3300025909 Bacteria 2297
46 Ga0207705_10091308 3300025909 Bacteria 2230
47 Ga0207684_10001194 3300025910 Bacteria 29054
48 Ga0207654_10000001 3300025911 Bacteria 1816198
49 Ga0207695_10003333 3300025913 Bacteria 22759
50 Ga0207671_10000002 3300025914 Bacteria 1144816
51 Ga0207671_10081336 3300025914 Bacteria 2429
52 Ga0207694_10000022 3300025924 Bacteria 288900
53 Ga0207690_10001606 3300025932 Bacteria 14082
54 Ga0207711_10006453 3300025941 Bacteria 9873
55 Ga0207711_10252769 3300025941 Bacteria 1619
56 Ga0207667_10000571 3300025949 Bacteria 48073
57 Ga0207667_10002156 3300025949 Bacteria 24666
58 Ga0207640_10018648 3300025981 Bacteria 4082
59 Ga0207658_10005255 3300025986 Bacteria 8908
60 Ga0207677_10046281 3300026023 Bacteria 2912
61 Ga0207703_10000075 3300026035 Bacteria 118422
62 Ga0207639_10105753 3300026041 Bacteria 2284
63 Ga0207641_10119165 3300026088 Bacteria 2352
64 Ga0207676_10012523 3300026095 Bacteria 6080
65 Ga0207674_10002541 3300026116 Bacteria 22988
66 Ga0307514_10008456 3300031649 Bacteria 8766
67 Ga0316576_10009987 3300031727 Bacteria 6147
68 Ga0316578_10018310 3300031728 Bacteria 3834
69 Ga0307413_10031002 3300031824 Bacteria 3011
70 Ga0307406_10000126 3300031901 Bacteria 44932
71 Ga0307406_10000431 3300031901 Bacteria 24450
72 Ga0307406_10001438 3300031901 Bacteria 13192
73 Ga0307406_10020876 3300031901 Bacteria 3866
74 Ga0307412_10093426 3300031911 Bacteria 2110
75 Ga0307414_10021822 3300032004 Bacteria 4028
76 Ga0316583_10006608 3300032133 Bacteria 4172
77 Ga0316585_10000565 3300032137 Bacteria 9046
78 Ga0316574_0002403 3300035398 Bacteria 9379
79 Ga0316584_0029965 3300036712 Bacteria 4018
80 Ga0395900_0010178 3300037418 Bacteria 9619
81 Ga0395901_0069054 3300038443 Bacteria 3680
82 Ga0395901_0107526 3300038443 Bacteria 2928
83 Ga0395901_0165191 3300038443 Bacteria 2324
84 Ga0439465_0032918 3300041413 Bacteria 1656
85 Ga0451806_149738 3300041462 Bacteria 2599
86 Ga0466965_0007944 3300044683 Bacteria 4892
87 Ga0495627_000645 3300046453 Bacteria 27237
88 Ga0495650_0002471 3300046471 Bacteria 14875
89 Ga0495656_0004383 3300046615 Bacteria 4829
90 Ga0496105_0074848 3300048908 Bacteria 2797
91 Ga0496109_0090592 3300048912 Bacteria 2828
92 Ga0496111_0226309 3300048914 Bacteria 1389
93 Ga0496116_0058405 3300048919 Bacteria 2515
94 Ga0496117_0000028 3300048920 Bacteria 407392
95 Ga0496117_0001282 3300048920 Bacteria 37109
96 Ga0496117_0001427 3300048920 Bacteria 34547
97 Ga0496117_0005258 3300048920 Bacteria 13736
98 Ga0496117_0065454 3300048920 Bacteria 2471
99 Ga0496118_0011962 3300048921 Bacteria 8387
100 Ga0496118_0066205 3300048921 Bacteria 2638
101 Ga0496119_0001581 3300048922 Bacteria 27095
102 Ga0496119_0003368 3300048922 Bacteria 16630
103 Ga0496119_0003987 3300048922 Bacteria 14945
104 Ga0496119_0079331 3300048922 Bacteria 1897
105 Ga0496120_0000697 3300048923 Bacteria 49216
106 Ga0496120_0000899 3300048923 Bacteria 41719
107 Ga0496120_0002616 3300048923 Bacteria 17850
108 Ga0496120_0003470 3300048923 Bacteria 14346
109 Ga0496120_0007068 3300048923 Bacteria 8430
110 Ga0496120_0030463 3300048923 Bacteria 3279
111 Ga0496122_0000020 3300048925 Bacteria 401675
112 Ga0496122_0002304 3300048925 Bacteria 27547
113 Ga0496122_0003322 3300048925 Bacteria 21251
114 Ga0496122_0012150 3300048925 Bacteria 8614
115 Ga0496123_0000003 3300048926 Bacteria 866556
116 Ga0496123_0005404 3300048926 Bacteria 12873
117 Ga0496124_0001543 3300048927 Bacteria 33363
118 Ga0496124_0006293 3300048927 Bacteria 12973
119 Ga0496125_0000242 3300048928 Bacteria 112000
120 Ga0496125_0002974 3300048928 Bacteria 21303
121 Ga0496125_0007267 3300048928 Bacteria 11796
122 Ga0496125_0018231 3300048928 Bacteria 6671
123 Ga0496125_0018325 3300048928 Bacteria 6652
124 Ga0496126_0021236 3300048929 Bacteria 6346
125 Ga0496126_0046207 3300048929 Bacteria 3996
126 Ga0496126_0052533 3300048929 Bacteria 3702
127 Ga0501031_0012954 3300049568 Bacteria 5444
128 Ga0501032_0001797 3300049569 Bacteria 16930
129 Ga0501032_0003342 3300049569 Bacteria 12307
130 Ga0501033_0015128 3300049570 Bacteria 5855
131 Ga0501033_0016520 3300049570 Bacteria 5588
132 Ga0501033_0082983 3300049570 Bacteria 2349
133 Ga0501034_0003063 3300049571 Bacteria 19283
134 Ga0501034_0028286 3300049571 Bacteria 5703
135 Ga0501034_0031536 3300049571 Bacteria 5383
136 Ga0501034_0036302 3300049571 Bacteria 4993
137 Ga0501034_0062610 3300049571 Bacteria 3736
138 Ga0501034_0094363 3300049571 Bacteria 2988
139 Ga0501034_0124568 3300049571 Bacteria 2562
140 Ga0501034_0186335 3300049571 Bacteria 2038
141 Ga0501036_0016278 3300049572 Bacteria 6211
142 Ga0501037_0002006 3300049573 Bacteria 14742
143 Ga0501037_0030559 3300049573 Bacteria 3980
144 Ga0501038_0005068 3300049574 Bacteria 12240
145 Ga0501038_0006347 3300049574 Bacteria 10942
146 Ga0501038_0050931 3300049574 Bacteria 3576
147 Ga0501039_0001599 3300049575 Bacteria 16682
148 Ga0501039_0064361 3300049575 Bacteria 2843
149 Ga0501039_0081334 3300049575 Bacteria 2522
150 Ga0501043_0003423 3300049579 Bacteria 13031
151 Ga0501043_0114549 3300049579 Bacteria 2116
152 Ga0501046_0003656 3300049580 Bacteria 14081
153 Ga0501047_0025189 3300049581 Bacteria 5716
154 Ga0501047_0123111 3300049581 Bacteria 2474
155 Ga0501048_0001168 3300049582 Bacteria 19795
156 Ga0501068_0048990 3300049584 Bacteria 2551
157 Ga0501070_0011370 3300049586 Bacteria 7523
158 Ga0501071_0018199 3300049587 Bacteria 4859
159 Ga0501072_0008695 3300049588 Bacteria 7709
160 Ga0501073_0046373 3300049589 Bacteria 3057
161 Ga0501073_0067123 3300049589 Bacteria 2500
162 Ga0501083_0000123 3300049744 Bacteria 52722
163 Ga0501035_0014064 3300049822 Bacteria 7383
164 Ga0501035_0075392 3300049822 Bacteria 2983
165 Ga0501044_0009411 3300049823 Bacteria 10644
166 Ga0501044_0016461 3300049823 Bacteria 7936
167 Ga0501044_0042209 3300049823 Bacteria 4745
168 Ga0501044_0083437 3300049823 Bacteria 3231
169 Ga0501044_0092732 3300049823 Bacteria 3046
170 Ga0501044_0099316 3300049823 Bacteria 2929
171 Ga0501045_0004124 3300049824 Bacteria 10038
172 nmdc:mga00v17_38666_c1 3300050491 Bacteria 2854
173 nmdc:mga00v17_45959_c1 3300050491 Bacteria 2640
174 nmdc:mga00v17_78347_c1 3300050491 Bacteria 2059
175 Ga0500651_0003781 3300053093 Bacteria 8346
176 Ga0500559_0000210 3300053136 Bacteria 46871
177 Ga0500568_0000414 3300053139 Bacteria 32584
178 Ga0500590_038558 3300053148 Bacteria 2465
179 Ga0500616_0000040 3300053153 Bacteria 367604
180 Ga0500616_0000109 3300053153 Bacteria 152604
181 Ga0501084_0089177 3300054114 Bacteria 2589

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048914 Ga0496111_0226309 Ga0496111_0226309_101_1375 424
2 3300048925 Ga0496122_0012150 Ga0496122_0012150_7309_8595 428
3 3300038443 Ga0395901_0069054 Ga0395901_0069054_26_1321 429
4 3300009148 Ga0105243_10122365 Ga0105243_101223652 430
5 3300005327 Ga0070658_10043307 Ga0070658_100433073 456
6 3300025909 Ga0207705_10091308 Ga0207705_100913082 456
7 3300048929 Ga0496126_0046207 Ga0496126_0046207_17_1399 460
8 3300048923 Ga0496120_0007068 Ga0496120_0007068_597_2111 471
9 iso_pu_bacteria 2977264416 2977265798 485
10 3300048908 Ga0496105_0074848 Ga0496105_0074848_88_1557 489
11 3300048912 Ga0496109_0090592 Ga0496109_0090592_222_1691 489
12 3300046471 Ga0495650_0002471 Ga0495650_0002471_7874_9463 498
13 iso_pu_bacteria 2857723135 2857725001 498
14 iso_pu_bacteria 2928121344 2928124969 498
15 3300053136 Ga0500559_0000210 Ga0500559_0000210_18243_19742 499
16 iso_pu_bacteria 2643221549 2643768220 499
17 iso_pu_bacteria 2643221619 2644111648 499
18 iso_pu_bacteria 2721755702 2723642971 499
19 iso_pu_bacteria 2808606372 2808902957 499
20 iso_pu_bacteria 2919443155 2919443529 499
21 iso_pu_bacteria 2935409751 2935412255 499
22 iso_pu_bacteria 2585428157 2588106837 500
23 iso_pu_bacteria 2643221542 2643735048 500
24 iso_pu_bacteria 2643221553 2643786689 500
25 iso_pu_bacteria 2643221566 2643846441 500
26 iso_pu_bacteria 2643221572 2643874553 500
27 iso_pu_bacteria 2643221575 2643888406 500
28 iso_pu_bacteria 2643221597 2643996569 500
29 iso_pu_bacteria 2643221616 2644094995 500
30 iso_pu_bacteria 2643221630 2644173210 500
31 iso_pu_bacteria 2643221632 2644181014 500
32 iso_pu_bacteria 2643221669 2644381609 500
33 iso_pu_bacteria 2643221724 2644681369 500
34 iso_pu_bacteria 2728369380 2730230198 500
35 iso_pu_bacteria 2739367654 2739607885 500
36 iso_pu_bacteria 2747842429 2747951655 500
37 iso_pu_bacteria 2757320536 2758224531 500
38 iso_pu_bacteria 2758568522 2760304105 500
39 iso_pu_bacteria 2758568621 2760621939 500
40 iso_pu_bacteria 2773857759 2774383578 500
41 iso_pu_bacteria 2773857763 2774400352 500
42 iso_pu_bacteria 2808606306 2808631872 500
43 iso_pu_bacteria 2808606368 2808884957 500
44 iso_pu_bacteria 2808606394 2809026781 500
45 iso_pu_bacteria 2808606447 2809226739 500
46 iso_pu_bacteria 2811994872 2812322340 500
47 iso_pu_bacteria 2833709550 2833710165 500
48 iso_pu_bacteria 2835188231 2835191081 500
49 iso_pu_bacteria 2844852863 2844856489 500
50 iso_pu_bacteria 2852632344 2852632957 500
51 iso_pu_bacteria 2852663356 2852665635 500
52 iso_pu_bacteria 2857720070 2857722254 500
53 iso_pu_bacteria 2862993130 2862994677 500
54 iso_pu_bacteria 2870628048 2870629630 500
55 iso_pu_bacteria 2884763398 2884764376 500
56 iso_pu_bacteria 2895660088 2895663431 500
57 iso_pu_bacteria 2906799679 2906801928 500
58 iso_pu_bacteria 2919395869 2919396728 500
59 iso_pu_bacteria 2939660829 2939663196 500
60 iso_pu_bacteria 2946033335 2946036907 500
61 iso_pu_bacteria 2946041624 2946044842 500
62 iso_pu_bacteria 2966924647 2966927750 500
63 iso_pu_bacteria 2974294766 2974298157 500
64 iso_pu_bacteria 2974324384 2974325608 500
65 iso_pu_bacteria 2977251589 2977251919 500
66 iso_pu_bacteria 8004182704 8004185729 500
67 iso_pu_bacteria 8016254467 8016254805 500
68 iso_pu_bacteria 8045830549 8045832843 500
69 iso_pu_bacteria 8056037122 8056037379 500
70 iso_pu_bacteria 8056579771 8056580838 500
71 iso_pu_bacteria 8057345674 8057345849 500
72 3300049570 Ga0501033_0082983 Ga0501033_0082983_119_1699 501
73 3300049571 Ga0501034_0028286 Ga0501034_0028286_2884_4392 501
74 3300049574 Ga0501038_0006347 Ga0501038_0006347_8692_10200 501
75 3300049579 Ga0501043_0114549 Ga0501043_0114549_91_1671 501
76 3300049589 Ga0501073_0067123 Ga0501073_0067123_469_2049 501
77 3300049823 Ga0501044_0083437 Ga0501044_0083437_849_2429 501
78 3300049823 Ga0501044_0099316 Ga0501044_0099316_72_1652 501
79 3300005327 Ga0070658_10111696 Ga0070658_101116962 502
80 3300005355 Ga0070671_100109952 Ga0070671_1001099522 502
81 3300005366 Ga0070659_100000308 Ga0070659_1000003085 502
82 3300005563 Ga0068855_100197395 Ga0068855_1001973952 502
83 3300005577 Ga0068857_100034939 Ga0068857_1000349392 502
84 3300005617 Ga0068859_100089456 Ga0068859_1000894562 502
85 3300005618 Ga0068864_100016565 Ga0068864_1000165652 502
86 3300005834 Ga0068851_10000001 Ga0068851_10000001207 502
87 3300005842 Ga0068858_100000016 Ga0068858_100000016181 502
88 3300006931 Ga0097620_100089457 Ga0097620_1000894572 502
89 3300009093 Ga0105240_10080844 Ga0105240_100808442 502
90 3300009098 Ga0105245_10016397 Ga0105245_100163973 502
91 3300009177 Ga0105248_10017960 Ga0105248_100179603 502
92 3300009545 Ga0105237_10001702 Ga0105237_1000170218 502
93 3300009551 Ga0105238_10001154 Ga0105238_1000115413 502
94 3300025254 Ga0209148_1000918 Ga0209148_10009187 502
95 3300025321 Ga0207656_10000002 Ga0207656_10000002720 502
96 3300025909 Ga0207705_10086060 Ga0207705_100860602 502
97 3300025911 Ga0207654_10000001 Ga0207654_100000011160 502
98 3300025913 Ga0207695_10003333 Ga0207695_1000333322 502
99 3300025914 Ga0207671_10000002 Ga0207671_100000021014 502
100 3300025914 Ga0207671_10081336 Ga0207671_100813362 502
101 3300025924 Ga0207694_10000022 Ga0207694_10000022160 502
102 3300025932 Ga0207690_10001606 Ga0207690_1000160611 502
103 3300025941 Ga0207711_10006453 Ga0207711_100064533 502
104 3300025941 Ga0207711_10252769 Ga0207711_102527691 502
105 3300025949 Ga0207667_10000571 Ga0207667_1000057141 502
106 3300025949 Ga0207667_10002156 Ga0207667_100021568 502
107 3300025981 Ga0207640_10018648 Ga0207640_100186483 502
108 3300025986 Ga0207658_10005255 Ga0207658_100052555 502
109 3300026023 Ga0207677_10046281 Ga0207677_100462812 502
110 3300026035 Ga0207703_10000075 Ga0207703_10000075117 502
111 3300026041 Ga0207639_10105753 Ga0207639_101057532 502
112 3300026088 Ga0207641_10119165 Ga0207641_101191652 502
113 3300026095 Ga0207676_10012523 Ga0207676_100125235 502
114 3300026116 Ga0207674_10002541 Ga0207674_1000254113 502
115 3300046615 Ga0495656_0004383 Ga0495656_0004383_1247_2764 502
116 3300048922 Ga0496119_0003368 Ga0496119_0003368_2111_3625 502
117 3300048923 Ga0496120_0000899 Ga0496120_0000899_11353_12867 502
118 3300048923 Ga0496120_0030463 Ga0496120_0030463_28_1542 502
119 3300048928 Ga0496125_0007267 Ga0496125_0007267_7627_9135 502
120 3300049571 Ga0501034_0036302 Ga0501034_0036302_254_1768 502
121 3300049571 Ga0501034_0186335 Ga0501034_0186335_458_1972 502
122 3300049575 Ga0501039_0081334 Ga0501039_0081334_668_2176 502
123 3300049588 Ga0501072_0008695 Ga0501072_0008695_2293_3807 502
124 3300049589 Ga0501073_0046373 Ga0501073_0046373_1380_2894 502
125 3300053093 Ga0500651_0003781 Ga0500651_0003781_518_2032 502
126 3300053148 Ga0500590_038558 Ga0500590_038558_711_2225 502
127 3300053153 Ga0500616_0000109 Ga0500616_0000109_40555_42069 502
128 3300009553 Ga0105249_10177763 Ga0105249_101777632 503
129 3300014326 Ga0157380_10100184 Ga0157380_101001842 503
130 3300025901 Ga0207688_10034670 Ga0207688_100346702 503
131 3300031727 Ga0316576_10009987 Ga0316576_100099874 503
132 3300031728 Ga0316578_10018310 Ga0316578_100183103 503
133 3300031824 Ga0307413_10031002 Ga0307413_100310022 503
134 3300032133 Ga0316583_10006608 Ga0316583_100066084 503
135 3300032137 Ga0316585_10000565 Ga0316585_100005656 503
136 3300035398 Ga0316574_0002403 Ga0316574_0002403_6851_8422 503
137 3300036712 Ga0316584_0029965 Ga0316584_0029965_1103_2674 503
138 3300041413 Ga0439465_0032918 Ga0439465_0032918_81_1598 503
139 3300044683 Ga0466965_0007944 Ga0466965_0007944_348_1865 503
140 3300049569 Ga0501032_0003342 Ga0501032_0003342_8087_9598 503
141 3300049575 Ga0501039_0064361 Ga0501039_0064361_532_2043 503
142 3300049823 Ga0501044_0092732 Ga0501044_0092732_249_1760 503
143 3300053139 Ga0500568_0000414 Ga0500568_0000414_13065_14576 503
144 iso_pu_bacteria 2964326757 2964327417 503
145 3300001979 JGI24740J21852_10001937 JGI24740J21852_100019374 504
146 3300002738 JGI25154J39366_1001062 JGI25154J39366_10010623 504
147 3300002772 JGI25164J39214_1000735 JGI25164J39214_10007354 504
148 3300003214 JGI25165J46597_1000044 JGI25165J46597_1000044211 504
149 3300003578 Ga0006562J51391_1058820 Ga0006562J51391_10588207 504
150 3300003578 Ga0006562J51391_1058821 Ga0006562J51391_10588216 504
151 3300005327 Ga0070658_10017415 Ga0070658_100174152 504
152 3300005467 Ga0070706_100002951 Ga0070706_1000029518 504
153 3300005471 Ga0070698_100151576 Ga0070698_1001515761 504
154 3300006038 Ga0075365_10014515 Ga0075365_100145153 504
155 3300006051 Ga0075364_10003740 Ga0075364_100037403 504
156 3300006051 Ga0075364_10006352 Ga0075364_100063522 504
157 3300006051 Ga0075364_10020250 Ga0075364_100202502 504
158 3300009036 Ga0105244_10014278 Ga0105244_100142784 504
159 3300013105 Ga0157369_10041138 Ga0157369_100411383 504
160 3300013250 Ga0171462_1001 Ga0171462_1001392 504
161 3300025231 Ga0207427_100077 Ga0207427_10007716 504
162 3300025233 Ga0209437_100530 Ga0209437_10053013 504
163 3300025246 Ga0209646_1000209 Ga0209646_100020936 504
164 3300025261 Ga0209233_1000014 Ga0209233_1000014210 504
165 3300025728 Ga0207655_1018149 Ga0207655_10181493 504
166 3300025909 Ga0207705_10069685 Ga0207705_100696852 504
167 3300025910 Ga0207684_10001194 Ga0207684_100011948 504
168 3300031649 Ga0307514_10008456 Ga0307514_100084562 504
169 3300031901 Ga0307406_10000126 Ga0307406_1000012626 504
170 3300031901 Ga0307406_10000431 Ga0307406_1000043121 504
171 3300031901 Ga0307406_10001438 Ga0307406_100014389 504
172 3300031901 Ga0307406_10020876 Ga0307406_100208762 504
173 3300031911 Ga0307412_10093426 Ga0307412_100934262 504
174 3300032004 Ga0307414_10021822 Ga0307414_100218222 504
175 3300037418 Ga0395900_0010178 Ga0395900_0010178_5405_6970 504
176 3300038443 Ga0395901_0107526 Ga0395901_0107526_833_2398 504
177 3300038443 Ga0395901_0165191 Ga0395901_0165191_797_2311 504
178 3300041462 Ga0451806_149738 Ga0451806_149738_322_1857 504
179 3300046453 Ga0495627_000645 Ga0495627_000645_11853_13367 504
180 3300048919 Ga0496116_0058405 Ga0496116_0058405_271_1785 504
181 3300048920 Ga0496117_0000028 Ga0496117_0000028_69444_70964 504
182 3300048920 Ga0496117_0001282 Ga0496117_0001282_29513_31042 504
183 3300048920 Ga0496117_0001427 Ga0496117_0001427_9355_10869 504
184 3300048920 Ga0496117_0005258 Ga0496117_0005258_6564_8078 504
185 3300048920 Ga0496117_0065454 Ga0496117_0065454_848_2362 504
186 3300048921 Ga0496118_0011962 Ga0496118_0011962_3585_5099 504
187 3300048921 Ga0496118_0066205 Ga0496118_0066205_90_1604 504
188 3300048922 Ga0496119_0001581 Ga0496119_0001581_3525_5045 504
189 3300048922 Ga0496119_0003987 Ga0496119_0003987_3051_4571 504
190 3300048922 Ga0496119_0079331 Ga0496119_0079331_313_1827 504
191 3300048923 Ga0496120_0000697 Ga0496120_0000697_35870_37390 504
192 3300048923 Ga0496120_0002616 Ga0496120_0002616_3573_5093 504
193 3300048923 Ga0496120_0003470 Ga0496120_0003470_2422_3936 504
194 3300048925 Ga0496122_0000020 Ga0496122_0000020_274798_276312 504
195 3300048925 Ga0496122_0002304 Ga0496122_0002304_3494_5014 504
196 3300048925 Ga0496122_0003322 Ga0496122_0003322_50_1579 504
197 3300048926 Ga0496123_0000003 Ga0496123_0000003_489922_491436 504
198 3300048926 Ga0496123_0005404 Ga0496123_0005404_8129_9658 504
199 3300048927 Ga0496124_0001543 Ga0496124_0001543_23892_25406 504
200 3300048927 Ga0496124_0006293 Ga0496124_0006293_2202_3722 504
201 3300048928 Ga0496125_0000242 Ga0496125_0000242_40303_41817 504
202 3300048928 Ga0496125_0002974 Ga0496125_0002974_12271_13791 504
203 3300048928 Ga0496125_0018231 Ga0496125_0018231_5052_6566 504
204 3300048928 Ga0496125_0018325 Ga0496125_0018325_2563_4077 504
205 3300048929 Ga0496126_0021236 Ga0496126_0021236_1512_3026 504
206 3300048929 Ga0496126_0052533 Ga0496126_0052533_118_1638 504
207 3300049568 Ga0501031_0012954 Ga0501031_0012954_136_1656 504
208 3300049569 Ga0501032_0001797 Ga0501032_0001797_5421_6941 504
209 3300049570 Ga0501033_0015128 Ga0501033_0015128_1717_3237 504
210 3300049570 Ga0501033_0016520 Ga0501033_0016520_123_1643 504
211 3300049571 Ga0501034_0003063 Ga0501034_0003063_10498_12018 504
212 3300049571 Ga0501034_0031536 Ga0501034_0031536_3241_4761 504
213 3300049571 Ga0501034_0062610 Ga0501034_0062610_1149_2702 504
214 3300049571 Ga0501034_0094363 Ga0501034_0094363_156_1736 504
215 3300049571 Ga0501034_0124568 Ga0501034_0124568_451_2022 504
216 3300049572 Ga0501036_0016278 Ga0501036_0016278_123_1643 504
217 3300049573 Ga0501037_0002006 Ga0501037_0002006_8696_10216 504
218 3300049573 Ga0501037_0030559 Ga0501037_0030559_651_2231 504
219 3300049574 Ga0501038_0005068 Ga0501038_0005068_3327_4847 504
220 3300049574 Ga0501038_0050931 Ga0501038_0050931_42_1622 504
221 3300049575 Ga0501039_0001599 Ga0501039_0001599_1000_2520 504
222 3300049579 Ga0501043_0003423 Ga0501043_0003423_1522_3042 504
223 3300049580 Ga0501046_0003656 Ga0501046_0003656_12179_13699 504
224 3300049581 Ga0501047_0025189 Ga0501047_0025189_4074_5594 504
225 3300049581 Ga0501047_0123111 Ga0501047_0123111_46_1617 504
226 3300049582 Ga0501048_0001168 Ga0501048_0001168_3487_5007 504
227 3300049584 Ga0501068_0048990 Ga0501068_0048990_661_2181 504
228 3300049586 Ga0501070_0011370 Ga0501070_0011370_2640_4160 504
229 3300049587 Ga0501071_0018199 Ga0501071_0018199_129_1649 504
230 3300049744 Ga0501083_0000123 Ga0501083_0000123_10405_11925 504
231 3300049822 Ga0501035_0014064 Ga0501035_0014064_4342_5862 504
232 3300049822 Ga0501035_0075392 Ga0501035_0075392_937_2508 504
233 3300049823 Ga0501044_0009411 Ga0501044_0009411_5798_7318 504
234 3300049823 Ga0501044_0016461 Ga0501044_0016461_6204_7775 504
235 3300049823 Ga0501044_0042209 Ga0501044_0042209_1337_2920 504
236 3300049824 Ga0501045_0004124 Ga0501045_0004124_2656_4176 504
237 3300050491 nmdc:mga00v17_38666_c1 nmdc:mga00v17_38666_c1_243_1757 504
238 3300050491 nmdc:mga00v17_45959_c1 nmdc:mga00v17_45959_c1_231_1745 504
239 3300050491 nmdc:mga00v17_78347_c1 nmdc:mga00v17_78347_c1_407_1921 504
240 3300053153 Ga0500616_0000040 Ga0500616_0000040_23161_24699 504
241 3300054114 Ga0501084_0089177 Ga0501084_0089177_642_2222 504

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

14

164

0.94

PF00005

ABC_tran

ABC transporter

268

425

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.8982 3 222
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8952 1 236
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.8889 1 223
4zir-assembly1.cif.gz_B crystal structure of ecfaa' heterodimer bound to amppnp 0.888 2 222
1gaj-assembly1.cif.gz_A crystal structure of a nucleotide-free atp-binding cassette from an abc transporter 0.8867 1 222
ID Description Score Start End Superfamily
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9552 3 236 3.40.50.300
af_P0AAF3_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9475 3 234 3.40.50.300
af_P37388_247_513_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9436 243 498 3.40.50.300
af_P04983_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9432 3 240 3.40.50.300
af_P77509_259_498_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9384 249 490 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A645H5B4-F1-model_v4 Galactose/methyl galactoside import ATP-binding protein MglA (EC 3.6.3.17) 0.97 383 503 GO:0005524
GO:0016787
AF-A0A7W1CF19-F1-model_v4 Heme ABC transporter ATP-binding protein 0.9677 325 496 GO:0005524
AF-V4YES4-F1-model_v4 ABC-type uncharacterized transport system, ATPase component 0.9631 255 498 GO:0005524
GO:0016887
AF-A0A7X9PAI4-F1-model_v4 ATP-binding cassette domain-containing protein 0.9631 275 499 GO:0005524
GO:0016887
AF-A0A378GUS1-F1-model_v4 deleted 0.9598 3 192

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