F353934

General Info

Members Datasets Scaffolds Average Seq Length
241 94 482 190

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0035479|Ga0316574_0035479_700_1308
Length 202
Sequence LFDHFHGTDAMPLLIAGLVLFLGTHSVSIVNPGWRERAIARVGEIPWKLLYGLVAIAGFALIVVGYGEARAMANPFVLYTPPTWLRHVALLLMLPVFPLLLAAYLPGRIQRATRHPMLLAVQLWAVAHLLANGTLRDLLLFGGFLVWAVADRVSLMQRPAVPVPGAPPAKWNDAIAVVGGLVLYAAFILGLHLWLIGVRPLA

Samples

Sample ID Description Type Environment
1 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
18 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
43 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
48 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
51 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
52 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
62 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
63 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
64 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
72 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
73 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
74 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
77 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
82 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
91 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
92 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
93 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
94 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.31
Metatranscriptomes 13.28
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.39
Nodule 0.41
Rhizoplane 0.83
Rhizosphere 87.14
Stem 0
Stem Tuber 0
Unclassified 7.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316574_0035479 3300035398 Bacteria 3048
2 SwRhRL2b_contig_707498 2162886007 Bacteria 4358
3 rootH2_10046060 3300003320 Bacteria 1585
4 rootH1_10050394 3300003323 Bacteria 3599
5 Ga0065704_10001104 3300005289 Bacteria 23164
6 Ga0070667_100019439 3300005367 Bacteria 5636
7 Ga0070708_101103713 3300005445 Bacteria 743
8 Ga0070678_100111731 3300005456 Bacteria 2139
9 Ga0070706_101260941 3300005467 Bacteria 678
10 Ga0070707_100027556 3300005468 Bacteria 5405
11 Ga0070698_100101800 3300005471 Bacteria 2844
12 Ga0070699_100258581 3300005518 Bacteria 1557
13 Ga0068853_100008381 3300005539 Bacteria 8302
14 Ga0070665_100007234 3300005548 Bacteria 11277
15 Ga0070665_100268473 3300005548 Bacteria 1708
16 Ga0070665_100304991 3300005548 Bacteria 1595
17 Ga0068852_100116030 3300005616 Bacteria 2442
18 Ga0068852_100202713 3300005616 Bacteria 1878
19 Ga0075367_10071363 3300006178 Bacteria 2089
20 Ga0075369_10350221 3300006186 Bacteria 693
21 Ga0075366_10006529 3300006195 Bacteria 6395
22 Ga0075366_10006833 3300006195 Bacteria 6277
23 Ga0075370_10185487 3300006353 Bacteria 1225
24 Ga0105240_10003101 3300009093 Bacteria 26140
25 Ga0105241_10401856 3300009174 Bacteria 1202
26 Ga0105237_10000080 3300009545 Bacteria 127788
27 Ga0105238_10000711 3300009551 Bacteria 34783
28 Ga0105239_10000116 3300010375 Bacteria 112811
29 Ga0157370_10438739 3300013104 Bacteria 1201
30 Ga0157379_10008047 3300014968 Bacteria 9153
31 Ga0163161_10208956 3300017792 Bacteria 1507
32 Ga0207699_10049276 3300025906 Bacteria 2479
33 Ga0207684_10015917 3300025910 Bacteria 6464
34 Ga0207654_10284513 3300025911 Bacteria 1119
35 Ga0207695_10069535 3300025913 Bacteria 3602
36 Ga0207694_10004090 3300025924 Bacteria 11471
37 Ga0207639_10014781 3300026041 Bacteria 5498
38 Ga0207676_10142736 3300026095 Bacteria 2052
39 Ga0207683_10045373 3300026121 Bacteria 3844
40 Ga0207698_10089507 3300026142 Bacteria 2514
41 Ga0207698_10116558 3300026142 Bacteria 2251
42 Ga0209970_1003717 3300027614 Bacteria 2554
43 Ga0268266_10055516 3300028379 Bacteria 3405
44 Ga0268266_10183981 3300028379 Bacteria 1904
45 Ga0268265_10055296 3300028380 Bacteria 3015
46 Ga0307515_10010230 3300028794 Bacteria 18010
47 Ga0265338_10468915 3300028800 Unclassified 890
48 Ga0307512_10110451 3300030522 Bacteria 1815
49 Ga0265340_10173180 3300031247 Bacteria 977
50 Ga0265327_10008610 3300031251 Bacteria 7564
51 Ga0307509_10002009 3300031507 Bacteria 33629
52 Ga0307509_10003678 3300031507 Bacteria 22944
53 Ga0307509_10115881 3300031507 Bacteria 2670
54 Ga0307509_10474591 3300031507 Bacteria 940
55 Ga0307508_10002648 3300031616 Bacteria 18776
56 Ga0307508_10056189 3300031616 Bacteria 3486
57 Ga0316575_10000243 3300031665 Bacteria 14791
58 Ga0316575_10018009 3300031665 Bacteria 2689
59 Ga0316575_10025533 3300031665 Bacteria 2291
60 Ga0316575_10028715 3300031665 Bacteria 2170
61 Ga0316575_10033869 3300031665 Bacteria 2005
62 Ga0316575_10049383 3300031665 Unclassified 1674
63 Ga0316575_10078321 3300031665 Bacteria 1332
64 Ga0316575_10124410 3300031665 Unclassified 1056
65 Ga0316579_10001080 3300031691 Bacteria 9649
66 Ga0316579_10008704 3300031691 Bacteria 4241
67 Ga0316579_10012438 3300031691 Bacteria 3642
68 Ga0316579_10029011 3300031691 Bacteria 2523
69 Ga0316579_10031849 3300031691 Bacteria 2416
70 Ga0316579_10038376 3300031691 Bacteria 2215
71 Ga0316579_10141260 3300031691 Bacteria 1161
72 Ga0316576_10000882 3300031727 Bacteria 15233
73 Ga0316576_10006610 3300031727 Bacteria 7239
74 Ga0316576_10009015 3300031727 Bacteria 6413
75 Ga0316576_10055865 3300031727 Bacteria 2882
76 Ga0316576_10062402 3300031727 Unclassified 2733
77 Ga0316576_10121613 3300031727 Bacteria 1960
78 Ga0316576_10142505 3300031727 Bacteria 1804
79 Ga0316576_10211769 3300031727 Bacteria 1458
80 Ga0316576_10289895 3300031727 Bacteria 1224
81 Ga0316576_10352519 3300031727 Bacteria 1095
82 Ga0316578_10000815 3300031728 Bacteria 11576
83 Ga0316578_10001211 3300031728 Bacteria 10241
84 Ga0316578_10002998 3300031728 Bacteria 7602
85 Ga0316578_10009282 3300031728 Bacteria 5054
86 Ga0316578_10011011 3300031728 Bacteria 4713
87 Ga0316578_10013585 3300031728 Bacteria 4323
88 Ga0316578_10039177 3300031728 Bacteria 2736
89 Ga0316578_10040142 3300031728 Bacteria 2704
90 Ga0316578_10046496 3300031728 Bacteria 2530
91 Ga0316578_10137822 3300031728 Bacteria 1469
92 Ga0316578_10243585 3300031728 Unclassified 1079
93 Ga0316578_10273736 3300031728 Unclassified 1011
94 Ga0316578_10276150 3300031728 Bacteria 1006
95 Ga0316578_10369444 3300031728 Unclassified 852
96 Ga0316578_10422138 3300031728 Bacteria 789
97 Ga0316577_10003248 3300031733 Bacteria 8179
98 Ga0316577_10004073 3300031733 Bacteria 7491
99 Ga0316577_10009447 3300031733 Bacteria 5248
100 Ga0316577_10010975 3300031733 Bacteria 4901
101 Ga0316577_10030638 3300031733 Bacteria 3004
102 Ga0316577_10033681 3300031733 Bacteria 2862
103 Ga0316577_10055475 3300031733 Bacteria 2211
104 Ga0316577_10066440 3300031733 Bacteria 2013
105 Ga0316577_10069012 3300031733 Bacteria 1974
106 Ga0316577_10142957 3300031733 Bacteria 1348
107 Ga0316577_10306479 3300031733 Bacteria 900
108 Ga0307413_10737012 3300031824 Bacteria 822
109 Ga0307410_10097989 3300031852 Bacteria 2096
110 Ga0307406_10912097 3300031901 Bacteria 749
111 Ga0307407_10441926 3300031903 Bacteria 942
112 Ga0307407_10556219 3300031903 Bacteria 849
113 Ga0307412_10827838 3300031911 Bacteria 806
114 Ga0307409_100085124 3300031995 Bacteria 2569
115 Ga0307409_100851918 3300031995 Bacteria 922
116 Ga0307409_101081974 3300031995 Bacteria 822
117 Ga0307416_100103906 3300032002 Bacteria 2482
118 Ga0307414_10692844 3300032004 Bacteria 922
119 Ga0307415_100033974 3300032126 Bacteria 3315
120 Ga0316583_10025418 3300032133 Bacteria 2115
121 Ga0316583_10037109 3300032133 Bacteria 1727
122 Ga0316583_10088810 3300032133 Bacteria 1078
123 Ga0316583_10134103 3300032133 Bacteria 863
124 Ga0316583_10152952 3300032133 Unclassified 803
125 Ga0316585_10001132 3300032137 Bacteria 6937
126 Ga0316585_10009012 3300032137 Bacteria 2901
127 Ga0316585_10021345 3300032137 Bacteria 1988
128 Ga0316585_10024668 3300032137 Bacteria 1861
129 Ga0316585_10046286 3300032137 Bacteria 1392
130 Ga0316585_10147174 3300032137 Bacteria 777
131 Ga0316580_10000005 3300032139 Bacteria 32338
132 Ga0316580_10001665 3300032139 Bacteria 5905
133 Ga0316580_10001881 3300032139 Bacteria 5636
134 Ga0316580_10003826 3300032139 Bacteria 4312
135 Ga0316580_10007445 3300032139 Bacteria 3262
136 Ga0316580_10009160 3300032139 Bacteria 2975
137 Ga0316580_10056604 3300032139 Bacteria 1205
138 Ga0316580_10110069 3300032139 Unclassified 843
139 Ga0316593_10005835 3300032168 Bacteria 3282
140 Ga0316593_10011728 3300032168 Bacteria 2556
141 Ga0316593_10023983 3300032168 Bacteria 1931
142 Ga0316593_10032809 3300032168 Bacteria 1698
143 Ga0316593_10039013 3300032168 Bacteria 1574
144 Ga0316593_10041520 3300032168 Bacteria 1531
145 Ga0316593_10046340 3300032168 Bacteria 1459
146 Ga0316593_10073618 3300032168 Bacteria 1184
147 Ga0316593_10144902 3300032168 Bacteria 862
148 Ga0307507_10070975 3300033179 Bacteria 3153
149 Ga0307510_10087612 3300033180 Bacteria 2977
150 Ga0316592_1000455 3300033524 Bacteria 5629
151 Ga0316592_1000782 3300033524 Bacteria 4736
152 Ga0316592_1004566 3300033524 Bacteria 2580
153 Ga0316592_1013199 3300033524 Bacteria 1701
154 Ga0316592_1019800 3300033524 Bacteria 1425
155 Ga0316588_1000376 3300033528 Bacteria 5852
156 Ga0316588_1000870 3300033528 Bacteria 4594
157 Ga0316588_1009359 3300033528 Bacteria 2042
158 Ga0316588_1032920 3300033528 Bacteria 1221
159 Ga0316588_1036389 3300033528 Bacteria 1168
160 Ga0316588_1049874 3300033528 Bacteria 1014
161 Ga0316587_1000628 3300033529 Bacteria 3755
162 Ga0316587_1024998 3300033529 Bacteria 1036
163 Ga0316596_1001211 3300033541 Bacteria 5088
164 Ga0316596_1001520 3300033541 Bacteria 4712
165 Ga0316596_1003097 3300033541 Bacteria 3617
166 Ga0316596_1003123 3300033541 Bacteria 3605
167 Ga0316596_1012688 3300033541 Bacteria 2075
168 Ga0316596_1015505 3300033541 Bacteria 1900
169 Ga0316596_1018990 3300033541 Bacteria 1742
170 Ga0316596_1023462 3300033541 Bacteria 1581
171 Ga0316596_1042881 3300033541 Bacteria 1190
172 Ga0316596_1070351 3300033541 Bacteria 937
173 Ga0373938_0109691 3300034957 Bacteria 701
174 Ga0316574_0000001 3300035398 Bacteria 74476
175 Ga0316574_0002590 3300035398 Bacteria 9113
176 Ga0316574_0007781 3300035398 Bacteria 5901
177 Ga0316574_0017331 3300035398 Bacteria 4215
178 Ga0316574_0028660 3300035398 Unclassified 3359
179 Ga0316574_0106429 3300035398 Bacteria 1797
180 Ga0316574_0134275 3300035398 Bacteria 1593
181 Ga0316574_0155278 3300035398 Bacteria 1474
182 Ga0316574_0182177 3300035398 Bacteria 1351
183 Ga0316574_0352783 3300035398 Unclassified 930
184 Ga0316574_0405849 3300035398 Bacteria 858
185 Ga0316582_0000003 3300036647 Bacteria 54635
186 Ga0316582_0008351 3300036647 Bacteria 5560
187 Ga0316582_0025011 3300036647 Bacteria 3579
188 Ga0316582_0030456 3300036647 Bacteria 3288
189 Ga0316582_0074713 3300036647 Bacteria 2201
190 Ga0316582_0123821 3300036647 Bacteria 1732
191 Ga0316582_0142660 3300036647 Bacteria 1615
192 Ga0316582_0161832 3300036647 Bacteria 1516
193 Ga0316582_0288759 3300036647 Bacteria 1126
194 Ga0316582_0387303 3300036647 Unclassified 962
195 Ga0316584_0000037 3300036712 Bacteria 47995
196 Ga0316584_0002471 3300036712 Bacteria 11703
197 Ga0316584_0004325 3300036712 Bacteria 9397
198 Ga0316584_0006144 3300036712 Bacteria 8123
199 Ga0316584_0012221 3300036712 Bacteria 6053
200 Ga0316584_0029923 3300036712 Bacteria 4021
201 Ga0316584_0046427 3300036712 Bacteria 3244
202 Ga0316584_0077697 3300036712 Bacteria 2486
203 Ga0316584_0088333 3300036712 Bacteria 2321
204 Ga0316584_0134424 3300036712 Bacteria 1846
205 Ga0316584_0175931 3300036712 Bacteria 1585
206 Ga0316584_0182381 3300036712 Bacteria 1554
207 Ga0316584_0227357 3300036712 Bacteria 1368
208 Ga0316584_0324707 3300036712 Unclassified 1109
209 Ga0316584_0722835 3300036712 Unclassified 681
210 Ga0316581_0106917 3300037588 Bacteria 862
211 Ga0436365_1480410 3300039437 Unclassified 1547
212 Ga0450895_014119 3300042132 Unclassified 705
213 Ga0451577_0004016 3300042876 Bacteria 15822
214 Ga0451577_0020315 3300042876 Bacteria 6096
215 Ga0451577_0613111 3300042876 Bacteria 987
216 Ga0466965_0369446 3300044683 Bacteria 788
217 Ga0453684_0036298 3300044712 Bacteria 6793
218 Ga0453684_0151919 3300044712 Bacteria 2750
219 Ga0453684_0542200 3300044712 Unclassified 1283
220 Ga0451576_0092288 3300045051 Bacteria 3149
221 Ga0451576_0438370 3300045051 Bacteria 1371
222 Ga0451576_0697448 3300045051 Bacteria 1067
223 Ga0451576_1079217 3300045051 Bacteria 840
224 Ga0451576_2447899 3300045051 Bacteria 534
225 Ga0495606_0100745 3300046507 Bacteria 1759
226 Ga0495666_0145526 3300046526 Bacteria 1103
227 Ga0496106_0012629 3300048909 Bacteria 6240
228 Ga0496110_0783082 3300048913 Bacteria 858
229 Ga0496121_0476687 3300048924 Bacteria 798
230 Ga0496125_0293910 3300048928 Bacteria 999
231 Ga0501046_0154596 3300049580 Bacteria 1729
232 nmdc:mga0k408_25924_c1 3300050493 Bacteria 3322
233 nmdc:mga07m45_101530_c1 3300050496 Bacteria 1652
234 nmdc:mga07m45_84697_c1 3300050496 Bacteria 1812
235 Ga0500583_0165159 3300053092 Bacteria 1103
236 Ga0500568_0042675 3300053139 Bacteria 1816
237 Ga0500568_0167142 3300053139 Bacteria 810
238 Ga0500622_0003749 3300053156 Bacteria 9930
239 Ga0500622_0101542 3300053156 Bacteria 1415
240 Ga0590075_053650 3300059424 Bacteria 1035
241 2514591424 2513237351 Bacteria 6968952
242 Ga0316574_0035479
243 SwRhRL2b_contig_707498
244 rootH2_10046060
245 rootH1_10050394
246 Ga0065704_10001104
247 Ga0070667_100019439
248 Ga0070708_101103713
249 Ga0070678_100111731
250 Ga0070706_101260941
251 Ga0070707_100027556
252 Ga0070698_100101800
253 Ga0070699_100258581
254 Ga0068853_100008381
255 Ga0070665_100007234
256 Ga0070665_100268473
257 Ga0070665_100304991
258 Ga0068852_100116030
259 Ga0068852_100202713
260 Ga0075367_10071363
261 Ga0075369_10350221
262 Ga0075366_10006529
263 Ga0075366_10006833
264 Ga0075370_10185487
265 Ga0105240_10003101
266 Ga0105241_10401856
267 Ga0105237_10000080
268 Ga0105238_10000711
269 Ga0105239_10000116
270 Ga0157370_10438739
271 Ga0157379_10008047
272 Ga0163161_10208956
273 Ga0207699_10049276
274 Ga0207684_10015917
275 Ga0207654_10284513
276 Ga0207695_10069535
277 Ga0207694_10004090
278 Ga0207639_10014781
279 Ga0207676_10142736
280 Ga0207683_10045373
281 Ga0207698_10089507
282 Ga0207698_10116558
283 Ga0209970_1003717
284 Ga0268266_10055516
285 Ga0268266_10183981
286 Ga0268265_10055296
287 Ga0307515_10010230
288 Ga0265338_10468915
289 Ga0307512_10110451
290 Ga0265340_10173180
291 Ga0265327_10008610
292 Ga0307509_10002009
293 Ga0307509_10003678
294 Ga0307509_10115881
295 Ga0307509_10474591
296 Ga0307508_10002648
297 Ga0307508_10056189
298 Ga0316575_10000243
299 Ga0316575_10018009
300 Ga0316575_10025533
301 Ga0316575_10028715
302 Ga0316575_10033869
303 Ga0316575_10049383
304 Ga0316575_10078321
305 Ga0316575_10124410
306 Ga0316579_10001080
307 Ga0316579_10008704
308 Ga0316579_10012438
309 Ga0316579_10029011
310 Ga0316579_10031849
311 Ga0316579_10038376
312 Ga0316579_10141260
313 Ga0316576_10000882
314 Ga0316576_10006610
315 Ga0316576_10009015
316 Ga0316576_10055865
317 Ga0316576_10062402
318 Ga0316576_10121613
319 Ga0316576_10142505
320 Ga0316576_10211769
321 Ga0316576_10289895
322 Ga0316576_10352519
323 Ga0316578_10000815
324 Ga0316578_10001211
325 Ga0316578_10002998
326 Ga0316578_10009282
327 Ga0316578_10011011
328 Ga0316578_10013585
329 Ga0316578_10039177
330 Ga0316578_10040142
331 Ga0316578_10046496
332 Ga0316578_10137822
333 Ga0316578_10243585
334 Ga0316578_10273736
335 Ga0316578_10276150
336 Ga0316578_10369444
337 Ga0316578_10422138
338 Ga0316577_10003248
339 Ga0316577_10004073
340 Ga0316577_10009447
341 Ga0316577_10010975
342 Ga0316577_10030638
343 Ga0316577_10033681
344 Ga0316577_10055475
345 Ga0316577_10066440
346 Ga0316577_10069012
347 Ga0316577_10142957
348 Ga0316577_10306479
349 Ga0307413_10737012
350 Ga0307410_10097989
351 Ga0307406_10912097
352 Ga0307407_10441926
353 Ga0307407_10556219
354 Ga0307412_10827838
355 Ga0307409_100085124
356 Ga0307409_100851918
357 Ga0307409_101081974
358 Ga0307416_100103906
359 Ga0307414_10692844
360 Ga0307415_100033974
361 Ga0316583_10025418
362 Ga0316583_10037109
363 Ga0316583_10088810
364 Ga0316583_10134103
365 Ga0316583_10152952
366 Ga0316585_10001132
367 Ga0316585_10009012
368 Ga0316585_10021345
369 Ga0316585_10024668
370 Ga0316585_10046286
371 Ga0316585_10147174
372 Ga0316580_10000005
373 Ga0316580_10001665
374 Ga0316580_10001881
375 Ga0316580_10003826
376 Ga0316580_10007445
377 Ga0316580_10009160
378 Ga0316580_10056604
379 Ga0316580_10110069
380 Ga0316593_10005835
381 Ga0316593_10011728
382 Ga0316593_10023983
383 Ga0316593_10032809
384 Ga0316593_10039013
385 Ga0316593_10041520
386 Ga0316593_10046340
387 Ga0316593_10073618
388 Ga0316593_10144902
389 Ga0307507_10070975
390 Ga0307510_10087612
391 Ga0316592_1000455
392 Ga0316592_1000782
393 Ga0316592_1004566
394 Ga0316592_1013199
395 Ga0316592_1019800
396 Ga0316588_1000376
397 Ga0316588_1000870
398 Ga0316588_1009359
399 Ga0316588_1032920
400 Ga0316588_1036389
401 Ga0316588_1049874
402 Ga0316587_1000628
403 Ga0316587_1024998
404 Ga0316596_1001211
405 Ga0316596_1001520
406 Ga0316596_1003097
407 Ga0316596_1003123
408 Ga0316596_1012688
409 Ga0316596_1015505
410 Ga0316596_1018990
411 Ga0316596_1023462
412 Ga0316596_1042881
413 Ga0316596_1070351
414 Ga0373938_0109691
415 Ga0316574_0000001
416 Ga0316574_0002590
417 Ga0316574_0007781
418 Ga0316574_0017331
419 Ga0316574_0028660
420 Ga0316574_0106429
421 Ga0316574_0134275
422 Ga0316574_0155278
423 Ga0316574_0182177
424 Ga0316574_0352783
425 Ga0316574_0405849
426 Ga0316582_0000003
427 Ga0316582_0008351
428 Ga0316582_0025011
429 Ga0316582_0030456
430 Ga0316582_0074713
431 Ga0316582_0123821
432 Ga0316582_0142660
433 Ga0316582_0161832
434 Ga0316582_0288759
435 Ga0316582_0387303
436 Ga0316584_0000037
437 Ga0316584_0002471
438 Ga0316584_0004325
439 Ga0316584_0006144
440 Ga0316584_0012221
441 Ga0316584_0029923
442 Ga0316584_0046427
443 Ga0316584_0077697
444 Ga0316584_0088333
445 Ga0316584_0134424
446 Ga0316584_0175931
447 Ga0316584_0182381
448 Ga0316584_0227357
449 Ga0316584_0324707
450 Ga0316584_0722835
451 Ga0316581_0106917
452 Ga0436365_1480410
453 Ga0450895_014119
454 Ga0451577_0004016
455 Ga0451577_0020315
456 Ga0451577_0613111
457 Ga0466965_0369446
458 Ga0453684_0036298
459 Ga0453684_0151919
460 Ga0453684_0542200
461 Ga0451576_0092288
462 Ga0451576_0438370
463 Ga0451576_0697448
464 Ga0451576_1079217
465 Ga0451576_2447899
466 Ga0495606_0100745
467 Ga0495666_0145526
468 Ga0496106_0012629
469 Ga0496110_0783082
470 Ga0496121_0476687
471 Ga0496125_0293910
472 Ga0501046_0154596
473 nmdc:mga0k408_25924_c1
474 nmdc:mga07m45_101530_c1
475 nmdc:mga07m45_84697_c1
476 Ga0500583_0165159
477 Ga0500568_0042675
478 Ga0500568_0167142
479 Ga0500622_0003749
480 Ga0500622_0101542
481 Ga0590075_053650
482 2514591424

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07298

NnrU

NnrU protein

13

200

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gup-assembly1.cif.gz_m cryo-em structure of mammalian respiratory supercomplex i1iii2iv1 0.5138 70 180
7v2c-assembly1.cif.gz_m active state complex i from q10 dataset 0.5073 69 180
5gpn-assembly1.cif.gz_k architecture of mammalian respirasome 0.4889 70 189
8c2s-assembly1.cif.gz_J cryo-em structure ndufs4 knockout complex i from mus musculus heart (class 1). 0.4743 72 185
7zdh-assembly1.cif.gz_J complex i from ovis aries at ph7.4, closed state 0.4681 73 182
ID Description Score Start End Superfamily
af_B4FHU1_131_318_1.20.120.1630 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.6692 3 147 1.20.120.1630
af_Q9UBM1_11_191_1.20.120.1630 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5645 3 143 1.20.120.1630
af_B4FHU1_131_318_1.20.120.1630 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5359 3 147 1.20.120.1630
af_Q54H80_6_189_1.20.120.1630 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5286 1 145 1.20.120.1630
af_A4I7B9_353_546_1.20.120.1630 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5153 2 144 1.20.120.1630
ID Description Score Start End GO Terms
AF-A0A5J4DU99-F1-model_v4 NnrU domain-containing protein 0.9799 1 145 GO:0016020
AF-A0A0L0LWJ8-F1-model_v4 deleted 0.9798 1 146
AF-A0A6N9R7L8-F1-model_v4 NnrU family protein 0.9684 1 146 GO:0016020
AF-A0A2N7FGR8-F1-model_v4 NnrU family protein 0.9653 1 190 GO:0016020
AF-A0A379C8T9-F1-model_v4 Predicted membrane protein 0.9601 1 190 GO:0016020

Map