F353456
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 241 | 176 | 482 | 405 |
Family's Representative Sequence
| Representative Sequence | 3300005329|Ga0070683_100031927|Ga0070683_1000319273 |
| Length | 462 |
| Sequence | MAMTSGDSRAEGPHRGVRGVVPPGDIAVSAARYDGGFGHRAAETAHILHVDMDAFYASVELRDQPGLRGKPVVVGGLGARGVVLSATYEARAFGVRSAMPIGQARRLCPQAVFIPPRHQLYGAVSKEVMAIFRAVTPEVEPLSLDEAFLDVSGAQRRLGTPRVIAELIRQEVRERQSITCSVGVAPVKFVAKIASARCKPDGLLVVPGHGVLEFLHPLPVSALWGVGDKAEEVLTRLGLRTVGDIAHVPEATLRRELGMAGAHLHALAWGRDERTVTPKREEKSVGAEETFTTDVDDPEVIKKELLRLSGRTARALRAAGCVARTVTVKLRLASFKTITRSRTLSEPTDVAREIYTAACALYESSGLDGRARLRLVGVRATGLRPATGAPRQLAFDDRPTGWREAEQAVDRIARRFGTDTVRPAALFRSSSDGDTGPGTDRSAQAPSNPRDLPRNLGNEPGI |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 20 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 24 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 25 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 26 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 27 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 28 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 31 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 32 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 33 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 34 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 50 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 51 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 52 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 78 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 79 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 80 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 81 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 82 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 83 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 84 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 85 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 86 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 87 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 88 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 89 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 90 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 91 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 92 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 93 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 94 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 95 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 96 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 97 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 98 | 3300033545 | Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 | Metagenome | Unclassified |
| 99 | 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Metagenome | Rhizosphere |
| 100 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 101 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 102 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 103 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 104 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 105 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 106 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 107 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 108 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 109 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 110 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 111 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 112 | 3300042993 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 | Metagenome | Rhizosphere |
| 113 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 114 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 115 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 124 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 125 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 127 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 128 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 129 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 130 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 131 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 132 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 133 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 134 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 139 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 140 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 142 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 146 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 150 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 153 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 154 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 155 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 156 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 157 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 158 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 159 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 160 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 161 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 162 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 163 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 164 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 165 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 166 | 2579778521 | Frankia torreyi CpI1-S | Isolate | Unclassified |
| 167 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 168 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 169 | 2626541554 | Frankia sp. AvcI.1 | Isolate | Nodule |
| 170 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 171 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 172 | 2643221632 | Leifsonia sp. Root112D2 | Isolate | Unclassified |
| 173 | 2643221679 | Angustibacter sp. Root456 | Isolate | Unclassified |
| 174 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 175 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
| 176 | 8054920844 | Frankia tisae Agncl-8 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.78 |
| Metatranscriptomes | 1.66 |
| Isolates | 4.56 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.83 |
| Nodule | 1.66 |
| Rhizoplane | 4.56 |
| Rhizosphere | 83.82 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.49 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100031927 | 3300005329 | Bacteria | 4792 |
| 2 | Ga0070658_10040687 | 3300005327 | Bacteria | 3750 |
| 3 | Ga0070683_100038952 | 3300005329 | Bacteria | 4360 |
| 4 | Ga0070680_100015893 | 3300005336 | Bacteria | 5910 |
| 5 | Ga0070682_100035967 | 3300005337 | Bacteria | 3026 |
| 6 | Ga0070687_100084156 | 3300005343 | Bacteria | 1743 |
| 7 | Ga0070659_100089797 | 3300005366 | Bacteria | 2462 |
| 8 | Ga0070709_10007663 | 3300005434 | Bacteria | 5924 |
| 9 | Ga0070714_100001845 | 3300005435 | Bacteria | 15422 |
| 10 | Ga0070714_100002881 | 3300005435 | Bacteria | 12726 |
| 11 | Ga0070714_100012955 | 3300005435 | Bacteria | 6669 |
| 12 | Ga0070714_100188156 | 3300005435 | Bacteria | 1882 |
| 13 | Ga0070714_100246544 | 3300005435 | Bacteria | 1650 |
| 14 | Ga0070714_100338660 | 3300005435 | Bacteria | 1410 |
| 15 | Ga0070713_100145809 | 3300005436 | Bacteria | 2101 |
| 16 | Ga0070713_100262283 | 3300005436 | Bacteria | 1579 |
| 17 | Ga0070713_100277705 | 3300005436 | Bacteria | 1536 |
| 18 | Ga0070710_10001481 | 3300005437 | Bacteria | 11057 |
| 19 | Ga0070711_100158468 | 3300005439 | Bacteria | 1714 |
| 20 | Ga0070663_100029129 | 3300005455 | Bacteria | 3768 |
| 21 | Ga0070662_100003013 | 3300005457 | Bacteria | 10481 |
| 22 | Ga0070681_10167793 | 3300005458 | Bacteria | 2117 |
| 23 | Ga0068867_100041477 | 3300005459 | Bacteria | 3363 |
| 24 | Ga0070707_100052246 | 3300005468 | Bacteria | 3918 |
| 25 | Ga0070679_100065373 | 3300005530 | Bacteria | 3625 |
| 26 | Ga0070679_100191425 | 3300005530 | Bacteria | 2014 |
| 27 | Ga0070679_100249624 | 3300005530 | Bacteria | 1731 |
| 28 | Ga0070684_100066096 | 3300005535 | Bacteria | 3174 |
| 29 | Ga0068853_100218923 | 3300005539 | Bacteria | 1738 |
| 30 | Ga0070686_100044911 | 3300005544 | Bacteria | 2781 |
| 31 | Ga0070696_100011429 | 3300005546 | Bacteria | 5947 |
| 32 | Ga0070665_100090034 | 3300005548 | Bacteria | 3074 |
| 33 | Ga0068857_100119637 | 3300005577 | Bacteria | 2371 |
| 34 | Ga0068857_100160386 | 3300005577 | Bacteria | 2040 |
| 35 | Ga0068856_100226736 | 3300005614 | Bacteria | 1884 |
| 36 | Ga0068852_100165149 | 3300005616 | Bacteria | 2071 |
| 37 | Ga0068852_100187968 | 3300005616 | Bacteria | 1947 |
| 38 | Ga0068858_100000004 | 3300005842 | Bacteria | 336234 |
| 39 | Ga0081455_10000892 | 3300005937 | Bacteria | 38515 |
| 40 | Ga0081455_10004538 | 3300005937 | Bacteria | 15507 |
| 41 | Ga0081455_10011994 | 3300005937 | Bacteria | 8672 |
| 42 | Ga0081455_10035141 | 3300005937 | Bacteria | 4483 |
| 43 | Ga0070717_10024426 | 3300006028 | Bacteria | 4800 |
| 44 | Ga0070717_10147148 | 3300006028 | Bacteria | 2035 |
| 45 | Ga0070716_100080660 | 3300006173 | Bacteria | 1941 |
| 46 | Ga0070712_100187150 | 3300006175 | Bacteria | 1617 |
| 47 | Ga0075428_100061049 | 3300006844 | Bacteria | 4127 |
| 48 | Ga0075428_100066450 | 3300006844 | Bacteria | 3948 |
| 49 | Ga0075428_100422286 | 3300006844 | Bacteria | 1429 |
| 50 | Ga0075429_100103619 | 3300006880 | Bacteria | 2485 |
| 51 | Ga0068865_100042722 | 3300006881 | Unclassified | 3092 |
| 52 | Ga0105245_10118270 | 3300009098 | Unclassified | 2473 |
| 53 | Ga0105247_10000041 | 3300009101 | Bacteria | 158571 |
| 54 | Ga0114129_10037036 | 3300009147 | Bacteria | 6888 |
| 55 | Ga0114129_10079025 | 3300009147 | Bacteria | 4574 |
| 56 | Ga0114129_10090928 | 3300009147 | Bacteria | 4230 |
| 57 | Ga0114129_10150517 | 3300009147 | Bacteria | 3185 |
| 58 | Ga0105243_10079463 | 3300009148 | Bacteria | 2673 |
| 59 | Ga0105242_10040402 | 3300009176 | Bacteria | 3759 |
| 60 | Ga0105248_10010520 | 3300009177 | Bacteria | 10191 |
| 61 | Ga0105248_10036952 | 3300009177 | Bacteria | 5462 |
| 62 | Ga0105249_10005860 | 3300009553 | Bacteria | 10633 |
| 63 | Ga0105246_10019866 | 3300011119 | Bacteria | 4303 |
| 64 | Ga0105246_10225471 | 3300011119 | Bacteria | 1472 |
| 65 | Ga0157369_10018866 | 3300013105 | Bacteria | 7729 |
| 66 | Ga0157369_10138600 | 3300013105 | Bacteria | 2575 |
| 67 | Ga0163162_10054500 | 3300013306 | Bacteria | 4023 |
| 68 | Ga0157372_10225350 | 3300013307 | Bacteria | 2173 |
| 69 | Ga0157375_10059384 | 3300013308 | Bacteria | 3789 |
| 70 | Ga0163163_10004800 | 3300014325 | Bacteria | 11604 |
| 71 | Ga0157380_10038103 | 3300014326 | Bacteria | 3731 |
| 72 | Ga0157379_10000009 | 3300014968 | Bacteria | 131645 |
| 73 | Ga0157379_10031432 | 3300014968 | Bacteria | 4729 |
| 74 | Ga0206353_10053322 | 3300020082 | Bacteria | 2540 |
| 75 | Ga0206353_10185229 | 3300020082 | Bacteria | 2847 |
| 76 | Ga0206353_10939142 | 3300020082 | Bacteria | 1609 |
| 77 | Ga0213875_10000582 | 3300021388 | Bacteria | 29614 |
| 78 | Ga0224712_10028685 | 3300022467 | Bacteria | 1992 |
| 79 | Ga0207710_10000038 | 3300025900 | Bacteria | 241794 |
| 80 | Ga0207647_10132298 | 3300025904 | Bacteria | 1465 |
| 81 | Ga0207699_10028050 | 3300025906 | Bacteria | 3124 |
| 82 | Ga0207684_10022763 | 3300025910 | Bacteria | 5349 |
| 83 | Ga0207707_10006558 | 3300025912 | Bacteria | 10158 |
| 84 | Ga0207660_10018219 | 3300025917 | Bacteria | 4677 |
| 85 | Ga0207657_10056823 | 3300025919 | Bacteria | 3374 |
| 86 | Ga0207700_10027977 | 3300025928 | Bacteria | 3955 |
| 87 | Ga0207700_10211728 | 3300025928 | Bacteria | 1639 |
| 88 | Ga0207664_10024744 | 3300025929 | Bacteria | 4514 |
| 89 | Ga0207664_10039483 | 3300025929 | Bacteria | 3665 |
| 90 | Ga0207664_10048478 | 3300025929 | Bacteria | 3340 |
| 91 | Ga0207706_10001752 | 3300025933 | Bacteria | 21303 |
| 92 | Ga0207709_10029198 | 3300025935 | Bacteria | 3195 |
| 93 | Ga0207669_10082036 | 3300025937 | Bacteria | 2069 |
| 94 | Ga0207704_10028929 | 3300025938 | Unclassified | 3082 |
| 95 | Ga0207704_10116470 | 3300025938 | Bacteria | 1818 |
| 96 | Ga0207665_10086513 | 3300025939 | Bacteria | 2165 |
| 97 | Ga0207661_10050497 | 3300025944 | Bacteria | 3314 |
| 98 | Ga0207668_10179220 | 3300025972 | Bacteria | 1670 |
| 99 | Ga0207677_10066419 | 3300026023 | Bacteria | 2522 |
| 100 | Ga0207703_10000011 | 3300026035 | Bacteria | 336248 |
| 101 | Ga0207678_10007707 | 3300026067 | Bacteria | 9510 |
| 102 | Ga0207708_10013180 | 3300026075 | Bacteria | 6171 |
| 103 | Ga0207676_10077845 | 3300026095 | Bacteria | 2684 |
| 104 | Ga0207674_10031940 | 3300026116 | Bacteria | 5527 |
| 105 | Ga0207674_10095572 | 3300026116 | Bacteria | 2957 |
| 106 | Ga0207675_100018437 | 3300026118 | Bacteria | 6508 |
| 107 | Ga0268266_10119581 | 3300028379 | Bacteria | 2343 |
| 108 | Ga0268266_10136491 | 3300028379 | Bacteria | 2198 |
| 109 | Ga0268264_10020997 | 3300028381 | Bacteria | 5335 |
| 110 | Ga0265337_1000279 | 3300028556 | Bacteria | 27809 |
| 111 | Ga0265326_10000533 | 3300028558 | Bacteria | 14447 |
| 112 | Ga0265319_1003836 | 3300028563 | Bacteria | 7698 |
| 113 | Ga0265334_10000292 | 3300028573 | Bacteria | 27991 |
| 114 | Ga0265318_10005917 | 3300028577 | Bacteria | 5685 |
| 115 | Ga0265323_10010837 | 3300028653 | Bacteria | 3691 |
| 116 | Ga0265336_10008402 | 3300028666 | Bacteria | 3622 |
| 117 | Ga0265338_10003087 | 3300028800 | Bacteria | 23899 |
| 118 | Ga0265338_10008209 | 3300028800 | Bacteria | 12720 |
| 119 | Ga0265332_10000688 | 3300031238 | Bacteria | 21619 |
| 120 | Ga0265320_10000591 | 3300031240 | Bacteria | 27892 |
| 121 | Ga0265325_10008887 | 3300031241 | Bacteria | 5901 |
| 122 | Ga0265340_10000611 | 3300031247 | Bacteria | 19983 |
| 123 | Ga0265339_10035050 | 3300031249 | Bacteria | 2818 |
| 124 | Ga0265314_10020229 | 3300031711 | Bacteria | 5140 |
| 125 | Ga0265342_10005872 | 3300031712 | Bacteria | 9265 |
| 126 | Ga0316576_10002264 | 3300031727 | Bacteria | 10901 |
| 127 | Ga0316578_10009415 | 3300031728 | Bacteria | 5026 |
| 128 | Ga0316577_10000345 | 3300031733 | Bacteria | 17323 |
| 129 | Ga0307416_100358269 | 3300032002 | Bacteria | 1480 |
| 130 | Ga0316583_10008232 | 3300032133 | Bacteria | 3759 |
| 131 | Ga0316585_10006507 | 3300032137 | Bacteria | 3342 |
| 132 | Ga0316214_1001467 | 3300033545 | Bacteria | 2751 |
| 133 | Ga0373948_0005557 | 3300034817 | Bacteria | 2050 |
| 134 | Ga0373934_0000337 | 3300035086 | Bacteria | 16404 |
| 135 | Ga0373936_0033430 | 3300035113 | Bacteria | 2038 |
| 136 | Ga0316574_0006863 | 3300035398 | Bacteria | 6192 |
| 137 | Ga0316574_0008890 | 3300035398 | Bacteria | 5604 |
| 138 | Ga0373935_0049413 | 3300035692 | Bacteria | 2665 |
| 139 | Ga0316582_0013679 | 3300036647 | Bacteria | 4576 |
| 140 | Ga0316584_0000402 | 3300036712 | Bacteria | 22556 |
| 141 | Ga0316584_0003606 | 3300036712 | Bacteria | 10121 |
| 142 | Ga0373925_0000010 | 3300037068 | Bacteria | 229059 |
| 143 | Ga0436364_0260906 | 3300037853 | Bacteria | 21582 |
| 144 | Ga0436364_0761410 | 3300037853 | Bacteria | 1702 |
| 145 | Ga0436364_1314906 | 3300037853 | Bacteria | 24323 |
| 146 | Ga0395901_0057579 | 3300038443 | Bacteria | 4042 |
| 147 | Ga0395901_0254911 | 3300038443 | Bacteria | 1827 |
| 148 | Ga0400485_20904 | 3300038735 | Unclassified | 1974 |
| 149 | Ga0436363_1399260 | 3300039450 | Bacteria | 3791 |
| 150 | Ga0436363_1570779 | 3300039450 | Bacteria | 2409 |
| 151 | Ga0439434_0026487 | 3300042435 | Bacteria | 1751 |
| 152 | Ga0439440_0020372 | 3300042993 | Unclassified | 1487 |
| 153 | Ga0466957_0001573 | 3300044842 | Bacteria | 12009 |
| 154 | Ga0466958_0002183 | 3300045836 | Bacteria | 9745 |
| 155 | Ga0466958_0124272 | 3300045836 | Bacteria | 1617 |
| 156 | Ga0495592_0197981 | 3300046454 | Bacteria | 1357 |
| 157 | Ga0495653_0092040 | 3300046463 | Bacteria | 2215 |
| 158 | Ga0495645_0043081 | 3300046543 | Bacteria | 3292 |
| 159 | Ga0495656_0015664 | 3300046615 | Bacteria | 2867 |
| 160 | Ga0495635_0005535 | 3300046663 | Bacteria | 8787 |
| 161 | Ga0495599_0134694 | 3300046678 | Bacteria | 1534 |
| 162 | Ga0495636_0058605 | 3300047318 | Unclassified | 1624 |
| 163 | Ga0495602_0084784 | 3300048088 | Bacteria | 2649 |
| 164 | Ga0496102_0036962 | 3300048905 | Bacteria | 4402 |
| 165 | Ga0496102_0039211 | 3300048905 | Bacteria | 4279 |
| 166 | Ga0496102_0116714 | 3300048905 | Bacteria | 2491 |
| 167 | Ga0496105_0033614 | 3300048908 | Bacteria | 4214 |
| 168 | Ga0496105_0078006 | 3300048908 | Bacteria | 2735 |
| 169 | Ga0496108_0079039 | 3300048911 | Bacteria | 2785 |
| 170 | Ga0496109_0102657 | 3300048912 | Bacteria | 2654 |
| 171 | Ga0496109_0151812 | 3300048912 | Bacteria | 2169 |
| 172 | Ga0496109_0179184 | 3300048912 | Bacteria | 1990 |
| 173 | Ga0496113_0363317 | 3300048916 | Bacteria | 1161 |
| 174 | Ga0496115_0095655 | 3300048918 | Bacteria | 2431 |
| 175 | Ga0496120_0000340 | 3300048923 | Bacteria | 77467 |
| 176 | Ga0496122_0001498 | 3300048925 | Bacteria | 37313 |
| 177 | Ga0496123_0020404 | 3300048926 | Bacteria | 5185 |
| 178 | Ga0496125_0009016 | 3300048928 | Bacteria | 10333 |
| 179 | Ga0496125_0042028 | 3300048928 | Bacteria | 3900 |
| 180 | Ga0496126_0008111 | 3300048929 | Bacteria | 11371 |
| 181 | Ga0496126_0066234 | 3300048929 | Bacteria | 3230 |
| 182 | Ga0496126_0108315 | 3300048929 | Bacteria | 2423 |
| 183 | Ga0501031_0007080 | 3300049568 | Bacteria | 7316 |
| 184 | Ga0501032_0049640 | 3300049569 | Bacteria | 2831 |
| 185 | Ga0501036_0007993 | 3300049572 | Bacteria | 8656 |
| 186 | Ga0501037_0022618 | 3300049573 | Bacteria | 4649 |
| 187 | Ga0501037_0064258 | 3300049573 | Bacteria | 2675 |
| 188 | Ga0501037_0099365 | 3300049573 | Bacteria | 2102 |
| 189 | Ga0501039_0006581 | 3300049575 | Bacteria | 8822 |
| 190 | Ga0501040_0004265 | 3300049576 | Bacteria | 9304 |
| 191 | Ga0501040_0015074 | 3300049576 | Bacteria | 5107 |
| 192 | Ga0501041_0003560 | 3300049577 | Bacteria | 8963 |
| 193 | Ga0501042_0007094 | 3300049578 | Bacteria | 7322 |
| 194 | Ga0501043_0012501 | 3300049579 | Bacteria | 6642 |
| 195 | Ga0501046_0008817 | 3300049580 | Bacteria | 8760 |
| 196 | Ga0501046_0014732 | 3300049580 | Bacteria | 6581 |
| 197 | Ga0501047_0010963 | 3300049581 | Bacteria | 8575 |
| 198 | Ga0501047_0092264 | 3300049581 | Bacteria | 2907 |
| 199 | Ga0501048_0008161 | 3300049582 | Bacteria | 7920 |
| 200 | Ga0501068_0008478 | 3300049584 | Bacteria | 5722 |
| 201 | Ga0501070_0003534 | 3300049586 | Bacteria | 13519 |
| 202 | Ga0501070_0007072 | 3300049586 | Bacteria | 9547 |
| 203 | Ga0501070_0008831 | 3300049586 | Bacteria | 8518 |
| 204 | Ga0501070_0049866 | 3300049586 | Bacteria | 3475 |
| 205 | Ga0501070_0142621 | 3300049586 | Bacteria | 1978 |
| 206 | Ga0501071_0008343 | 3300049587 | Bacteria | 6844 |
| 207 | Ga0501072_0006172 | 3300049588 | Bacteria | 9131 |
| 208 | Ga0501073_0062598 | 3300049589 | Bacteria | 2595 |
| 209 | Ga0501075_0001833 | 3300049591 | Bacteria | 14016 |
| 210 | Ga0501075_0035919 | 3300049591 | Bacteria | 3697 |
| 211 | Ga0501075_0109534 | 3300049591 | Bacteria | 2100 |
| 212 | Ga0501077_0007257 | 3300049593 | Bacteria | 6835 |
| 213 | Ga0501079_0000159 | 3300049741 | Bacteria | 37178 |
| 214 | Ga0501079_0006536 | 3300049741 | Bacteria | 8762 |
| 215 | Ga0501079_0246954 | 3300049741 | Bacteria | 1395 |
| 216 | Ga0501080_0001965 | 3300049742 | Bacteria | 17741 |
| 217 | Ga0501080_0004998 | 3300049742 | Bacteria | 11808 |
| 218 | Ga0501080_0015854 | 3300049742 | Bacteria | 6952 |
| 219 | Ga0501080_0070238 | 3300049742 | Bacteria | 3257 |
| 220 | Ga0501081_0010801 | 3300049743 | Bacteria | 5964 |
| 221 | Ga0501044_0098617 | 3300049823 | Bacteria | 2941 |
| 222 | Ga0501045_0006573 | 3300049824 | Bacteria | 8055 |
| 223 | nmdc:mga05p37_393817_c1 | 3300050507 | Bacteria | 1619 |
| 224 | nmdc:mga06r32_16683_c1 | 3300050510 | Bacteria | 6693 |
| 225 | Ga0500643_000082 | 3300053087 | Bacteria | 101189 |
| 226 | Ga0500573_0189139 | 3300053140 | Bacteria | 1101 |
| 227 | Ga0501084_0002107 | 3300054114 | Bacteria | 15894 |
| 228 | Ga0501082_0004338 | 3300060353 | Bacteria | 12402 |
| 229 | Ga0466962_0019590 | 3300061719 | Bacteria | 3253 |
| 230 | Ga0530510_0019292 | 3300061734 | Bacteria | 4839 |
| 231 | 2579852905 | 2579778521 | Bacteria | 7624758 |
| 232 | 2619854079 | 2619618881 | Bacteria | 7521104 |
| 233 | 2620348944 | 2619619003 | Bacteria | 7619552 |
| 234 | 2626639580 | 2626541554 | Bacteria | 7741902 |
| 235 | 2643850429 | 2643221567 | Bacteria | 4163945 |
| 236 | 2644134187 | 2643221624 | Bacteria | 4384879 |
| 237 | 2644183116 | 2643221632 | Bacteria | 3406696 |
| 238 | 2644446408 | 2643221679 | Bacteria | 3839507 |
| 239 | 2852645403 | 2852643534 | Bacteria | 3013378 |
| 240 | 8054916637 | 8054913762 | Bacteria | 7713009 |
| 241 | 8054924088 | 8054920844 | Bacteria | 7068637 |
| 242 | Ga0070683_100031927 | |||
| 243 | Ga0070658_10040687 | |||
| 244 | Ga0070683_100038952 | |||
| 245 | Ga0070680_100015893 | |||
| 246 | Ga0070682_100035967 | |||
| 247 | Ga0070687_100084156 | |||
| 248 | Ga0070659_100089797 | |||
| 249 | Ga0070709_10007663 | |||
| 250 | Ga0070714_100001845 | |||
| 251 | Ga0070714_100002881 | |||
| 252 | Ga0070714_100012955 | |||
| 253 | Ga0070714_100188156 | |||
| 254 | Ga0070714_100246544 | |||
| 255 | Ga0070714_100338660 | |||
| 256 | Ga0070713_100145809 | |||
| 257 | Ga0070713_100262283 | |||
| 258 | Ga0070713_100277705 | |||
| 259 | Ga0070710_10001481 | |||
| 260 | Ga0070711_100158468 | |||
| 261 | Ga0070663_100029129 | |||
| 262 | Ga0070662_100003013 | |||
| 263 | Ga0070681_10167793 | |||
| 264 | Ga0068867_100041477 | |||
| 265 | Ga0070707_100052246 | |||
| 266 | Ga0070679_100065373 | |||
| 267 | Ga0070679_100191425 | |||
| 268 | Ga0070679_100249624 | |||
| 269 | Ga0070684_100066096 | |||
| 270 | Ga0068853_100218923 | |||
| 271 | Ga0070686_100044911 | |||
| 272 | Ga0070696_100011429 | |||
| 273 | Ga0070665_100090034 | |||
| 274 | Ga0068857_100119637 | |||
| 275 | Ga0068857_100160386 | |||
| 276 | Ga0068856_100226736 | |||
| 277 | Ga0068852_100165149 | |||
| 278 | Ga0068852_100187968 | |||
| 279 | Ga0068858_100000004 | |||
| 280 | Ga0081455_10000892 | |||
| 281 | Ga0081455_10004538 | |||
| 282 | Ga0081455_10011994 | |||
| 283 | Ga0081455_10035141 | |||
| 284 | Ga0070717_10024426 | |||
| 285 | Ga0070717_10147148 | |||
| 286 | Ga0070716_100080660 | |||
| 287 | Ga0070712_100187150 | |||
| 288 | Ga0075428_100061049 | |||
| 289 | Ga0075428_100066450 | |||
| 290 | Ga0075428_100422286 | |||
| 291 | Ga0075429_100103619 | |||
| 292 | Ga0068865_100042722 | |||
| 293 | Ga0105245_10118270 | |||
| 294 | Ga0105247_10000041 | |||
| 295 | Ga0114129_10037036 | |||
| 296 | Ga0114129_10079025 | |||
| 297 | Ga0114129_10090928 | |||
| 298 | Ga0114129_10150517 | |||
| 299 | Ga0105243_10079463 | |||
| 300 | Ga0105242_10040402 | |||
| 301 | Ga0105248_10010520 | |||
| 302 | Ga0105248_10036952 | |||
| 303 | Ga0105249_10005860 | |||
| 304 | Ga0105246_10019866 | |||
| 305 | Ga0105246_10225471 | |||
| 306 | Ga0157369_10018866 | |||
| 307 | Ga0157369_10138600 | |||
| 308 | Ga0163162_10054500 | |||
| 309 | Ga0157372_10225350 | |||
| 310 | Ga0157375_10059384 | |||
| 311 | Ga0163163_10004800 | |||
| 312 | Ga0157380_10038103 | |||
| 313 | Ga0157379_10000009 | |||
| 314 | Ga0157379_10031432 | |||
| 315 | Ga0206353_10053322 | |||
| 316 | Ga0206353_10185229 | |||
| 317 | Ga0206353_10939142 | |||
| 318 | Ga0213875_10000582 | |||
| 319 | Ga0224712_10028685 | |||
| 320 | Ga0207710_10000038 | |||
| 321 | Ga0207647_10132298 | |||
| 322 | Ga0207699_10028050 | |||
| 323 | Ga0207684_10022763 | |||
| 324 | Ga0207707_10006558 | |||
| 325 | Ga0207660_10018219 | |||
| 326 | Ga0207657_10056823 | |||
| 327 | Ga0207700_10027977 | |||
| 328 | Ga0207700_10211728 | |||
| 329 | Ga0207664_10024744 | |||
| 330 | Ga0207664_10039483 | |||
| 331 | Ga0207664_10048478 | |||
| 332 | Ga0207706_10001752 | |||
| 333 | Ga0207709_10029198 | |||
| 334 | Ga0207669_10082036 | |||
| 335 | Ga0207704_10028929 | |||
| 336 | Ga0207704_10116470 | |||
| 337 | Ga0207665_10086513 | |||
| 338 | Ga0207661_10050497 | |||
| 339 | Ga0207668_10179220 | |||
| 340 | Ga0207677_10066419 | |||
| 341 | Ga0207703_10000011 | |||
| 342 | Ga0207678_10007707 | |||
| 343 | Ga0207708_10013180 | |||
| 344 | Ga0207676_10077845 | |||
| 345 | Ga0207674_10031940 | |||
| 346 | Ga0207674_10095572 | |||
| 347 | Ga0207675_100018437 | |||
| 348 | Ga0268266_10119581 | |||
| 349 | Ga0268266_10136491 | |||
| 350 | Ga0268264_10020997 | |||
| 351 | Ga0265337_1000279 | |||
| 352 | Ga0265326_10000533 | |||
| 353 | Ga0265319_1003836 | |||
| 354 | Ga0265334_10000292 | |||
| 355 | Ga0265318_10005917 | |||
| 356 | Ga0265323_10010837 | |||
| 357 | Ga0265336_10008402 | |||
| 358 | Ga0265338_10003087 | |||
| 359 | Ga0265338_10008209 | |||
| 360 | Ga0265332_10000688 | |||
| 361 | Ga0265320_10000591 | |||
| 362 | Ga0265325_10008887 | |||
| 363 | Ga0265340_10000611 | |||
| 364 | Ga0265339_10035050 | |||
| 365 | Ga0265314_10020229 | |||
| 366 | Ga0265342_10005872 | |||
| 367 | Ga0316576_10002264 | |||
| 368 | Ga0316578_10009415 | |||
| 369 | Ga0316577_10000345 | |||
| 370 | Ga0307416_100358269 | |||
| 371 | Ga0316583_10008232 | |||
| 372 | Ga0316585_10006507 | |||
| 373 | Ga0316214_1001467 | |||
| 374 | Ga0373948_0005557 | |||
| 375 | Ga0373934_0000337 | |||
| 376 | Ga0373936_0033430 | |||
| 377 | Ga0316574_0006863 | |||
| 378 | Ga0316574_0008890 | |||
| 379 | Ga0373935_0049413 | |||
| 380 | Ga0316582_0013679 | |||
| 381 | Ga0316584_0000402 | |||
| 382 | Ga0316584_0003606 | |||
| 383 | Ga0373925_0000010 | |||
| 384 | Ga0436364_0260906 | |||
| 385 | Ga0436364_0761410 | |||
| 386 | Ga0436364_1314906 | |||
| 387 | Ga0395901_0057579 | |||
| 388 | Ga0395901_0254911 | |||
| 389 | Ga0400485_20904 | |||
| 390 | Ga0436363_1399260 | |||
| 391 | Ga0436363_1570779 | |||
| 392 | Ga0439434_0026487 | |||
| 393 | Ga0439440_0020372 | |||
| 394 | Ga0466957_0001573 | |||
| 395 | Ga0466958_0002183 | |||
| 396 | Ga0466958_0124272 | |||
| 397 | Ga0495592_0197981 | |||
| 398 | Ga0495653_0092040 | |||
| 399 | Ga0495645_0043081 | |||
| 400 | Ga0495656_0015664 | |||
| 401 | Ga0495635_0005535 | |||
| 402 | Ga0495599_0134694 | |||
| 403 | Ga0495636_0058605 | |||
| 404 | Ga0495602_0084784 | |||
| 405 | Ga0496102_0036962 | |||
| 406 | Ga0496102_0039211 | |||
| 407 | Ga0496102_0116714 | |||
| 408 | Ga0496105_0033614 | |||
| 409 | Ga0496105_0078006 | |||
| 410 | Ga0496108_0079039 | |||
| 411 | Ga0496109_0102657 | |||
| 412 | Ga0496109_0151812 | |||
| 413 | Ga0496109_0179184 | |||
| 414 | Ga0496113_0363317 | |||
| 415 | Ga0496115_0095655 | |||
| 416 | Ga0496120_0000340 | |||
| 417 | Ga0496122_0001498 | |||
| 418 | Ga0496123_0020404 | |||
| 419 | Ga0496125_0009016 | |||
| 420 | Ga0496125_0042028 | |||
| 421 | Ga0496126_0008111 | |||
| 422 | Ga0496126_0066234 | |||
| 423 | Ga0496126_0108315 | |||
| 424 | Ga0501031_0007080 | |||
| 425 | Ga0501032_0049640 | |||
| 426 | Ga0501036_0007993 | |||
| 427 | Ga0501037_0022618 | |||
| 428 | Ga0501037_0064258 | |||
| 429 | Ga0501037_0099365 | |||
| 430 | Ga0501039_0006581 | |||
| 431 | Ga0501040_0004265 | |||
| 432 | Ga0501040_0015074 | |||
| 433 | Ga0501041_0003560 | |||
| 434 | Ga0501042_0007094 | |||
| 435 | Ga0501043_0012501 | |||
| 436 | Ga0501046_0008817 | |||
| 437 | Ga0501046_0014732 | |||
| 438 | Ga0501047_0010963 | |||
| 439 | Ga0501047_0092264 | |||
| 440 | Ga0501048_0008161 | |||
| 441 | Ga0501068_0008478 | |||
| 442 | Ga0501070_0003534 | |||
| 443 | Ga0501070_0007072 | |||
| 444 | Ga0501070_0008831 | |||
| 445 | Ga0501070_0049866 | |||
| 446 | Ga0501070_0142621 | |||
| 447 | Ga0501071_0008343 | |||
| 448 | Ga0501072_0006172 | |||
| 449 | Ga0501073_0062598 | |||
| 450 | Ga0501075_0001833 | |||
| 451 | Ga0501075_0035919 | |||
| 452 | Ga0501075_0109534 | |||
| 453 | Ga0501077_0007257 | |||
| 454 | Ga0501079_0000159 | |||
| 455 | Ga0501079_0006536 | |||
| 456 | Ga0501079_0246954 | |||
| 457 | Ga0501080_0001965 | |||
| 458 | Ga0501080_0004998 | |||
| 459 | Ga0501080_0015854 | |||
| 460 | Ga0501080_0070238 | |||
| 461 | Ga0501081_0010801 | |||
| 462 | Ga0501044_0098617 | |||
| 463 | Ga0501045_0006573 | |||
| 464 | nmdc:mga05p37_393817_c1 | |||
| 465 | nmdc:mga06r32_16683_c1 | |||
| 466 | Ga0500643_000082 | |||
| 467 | Ga0500573_0189139 | |||
| 468 | Ga0501084_0002107 | |||
| 469 | Ga0501082_0004338 | |||
| 470 | Ga0466962_0019590 | |||
| 471 | Ga0530510_0019292 | |||
| 472 | 2579852905 | |||
| 473 | 2619854079 | |||
| 474 | 2620348944 | |||
| 475 | 2626639580 | |||
| 476 | 2643850429 | |||
| 477 | 2644134187 | |||
| 478 | 2644183116 | |||
| 479 | 2644446408 | |||
| 480 | 2852645403 | |||
| 481 | 8054916637 | |||
| 482 | 8054924088 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4dez-assembly1.cif.gz_A | structure of msdpo4 | 0.9292 | 7 | 239 |
| 4dez-assembly1.cif.gz_A | structure of msdpo4 | 0.9176 | 7 | 239 |
| 1im4-assembly1.cif.gz_A | crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus | 0.9144 | 8 | 203 |
| 4f4z-assembly1.cif.gz_B | y-family dna polymerase chimera dpo4-dpo4-dbh | 0.913 | 9 | 346 |
| 6ig1-assembly1.cif.gz_F | dna polymerase iv - dna ternary complex 10 | 0.9073 | 7 | 343 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FWZ5_4_63_3.40.1170.60 | Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; | 0.9848 | 18 | 75 | 3.40.1170.60 |
| af_Q2FWZ5_229_340_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9751 | 241 | 347 | 3.30.1490.100 |
| af_A0A0R0LFA9_330_427_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9676 | 242 | 328 | 3.30.1490.100 |
| 4f50A02 | Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; | 0.9637 | 18 | 79 | 3.40.1170.60 |
| af_Q2FWZ5_64_170_3.30.70.270 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain | 0.9631 | 79 | 176 | 3.30.70.270 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6B2XPQ8-F1-model_v4 | DNA polymerase IV | 0.9885 | 31 | 176 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A520W1V6-F1-model_v4 | DNA polymerase IV | 0.984 | 1 | 161 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A2W6EWT8-F1-model_v4 | DNA polymerase IV | 0.9826 | 6 | 240 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A4Q3J0F6-F1-model_v4 | deleted | 0.9816 | 13 | 105 |
|
| AF-A0A7Y1U053-F1-model_v4 | DNA polymerase IV (EC 2.7.7.7) | 0.9799 | 8 | 156 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |