F353032

General Info

Members Datasets Scaffolds Average Seq Length
240 36 480 86

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0061132|Ga0316574_0061132_134_415
Length 93
Sequence MSEETQSPEKHRGLRKERVGIVVSDKMDKTITVRVESARRHPSYEKVIRTSKMYHAHDERNEAGAGDTVRLVETRPMSKTKCWRLTEILEKAK

Samples

Sample ID Description Type Environment
1 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
2 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
3 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
4 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
5 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
6 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
7 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
8 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
9 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
10 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
11 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
12 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
13 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
14 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
15 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
16 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
17 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
18 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
19 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
22 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
23 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
24 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
25 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
26 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
27 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
28 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
29 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
30 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
31 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
32 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
33 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
34 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
35 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
36 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.42
Metatranscriptomes 24.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.5
Rhizosphere 95
Stem 0
Stem Tuber 0
Unclassified 3.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316574_0061132 3300035398 Bacteria 2365
2 Ga0265337_1149751 3300028556 Unclassified 632
3 Ga0265334_10054708 3300028573 Bacteria 1521
4 Ga0265323_10000040 3300028653 Bacteria 70373
5 Ga0265323_10060536 3300028653 Bacteria 1318
6 Ga0265323_10167198 3300028653 Bacteria 700
7 Ga0265323_10292009 3300028653 Bacteria 505
8 Ga0265322_10023100 3300028654 Bacteria 1779
9 Ga0265322_10110402 3300028654 Bacteria 783
10 Ga0265322_10153338 3300028654 Bacteria 659
11 Ga0265336_10026760 3300028666 Bacteria 1810
12 Ga0265330_10129584 3300031235 Unclassified 1074
13 Ga0265328_10090442 3300031239 Bacteria 1131
14 Ga0265329_10199432 3300031242 Unclassified 658
15 Ga0265327_10000370 3300031251 Bacteria 84921
16 Ga0265327_10089061 3300031251 Bacteria 1508
17 Ga0265316_10000486 3300031344 Bacteria 45040
18 Ga0265316_10002446 3300031344 Bacteria 19266
19 Ga0265316_10004409 3300031344 Bacteria 14019
20 Ga0265316_10042062 3300031344 Bacteria 3653
21 Ga0265316_10245238 3300031344 Bacteria 1316
22 Ga0265316_10265089 3300031344 Bacteria 1259
23 Ga0265342_10073798 3300031712 Bacteria 1984
24 Ga0265342_10121575 3300031712 Bacteria 1470
25 Ga0316576_10001081 3300031727 Bacteria 14158
26 Ga0316576_10010880 3300031727 Bacteria 5934
27 Ga0316576_10022758 3300031727 Bacteria 4356
28 Ga0316576_10034114 3300031727 Bacteria 3627
29 Ga0316576_10056945 3300031727 Bacteria 2856
30 Ga0316576_10079789 3300031727 Bacteria 2426
31 Ga0316576_10143122 3300031727 Bacteria 1800
32 Ga0316576_10222150 3300031727 Bacteria 1421
33 Ga0316576_10234620 3300031727 Bacteria 1379
34 Ga0316576_10440167 3300031727 Bacteria 963
35 Ga0316576_10590477 3300031727 Bacteria 811
36 Ga0316578_10009003 3300031728 Bacteria 5110
37 Ga0316578_10040210 3300031728 Bacteria 2702
38 Ga0316578_10141678 3300031728 Bacteria 1448
39 Ga0316578_10382861 3300031728 Bacteria 835
40 Ga0316578_10402380 3300031728 Unclassified 811
41 Ga0316578_10877747 3300031728 Bacteria 518
42 Ga0316577_10016238 3300031733 Bacteria 4101
43 Ga0316577_10530231 3300031733 Bacteria 670
44 Ga0316585_10055577 3300032137 Bacteria 1274
45 Ga0316585_10318282 3300032137 Bacteria 517
46 Ga0316580_10073011 3300032139 Bacteria 1050
47 Ga0316580_10222986 3300032139 Bacteria 582
48 Ga0316593_10000201 3300032168 Bacteria 9314
49 Ga0316593_10000279 3300032168 Bacteria 8591
50 Ga0316593_10008603 3300032168 Bacteria 2851
51 Ga0316593_10023936 3300032168 Bacteria 1932
52 Ga0316593_10024370 3300032168 Bacteria 1918
53 Ga0316593_10052376 3300032168 Bacteria 1382
54 Ga0316593_10076758 3300032168 Bacteria 1161
55 Ga0316593_10081391 3300032168 Bacteria 1131
56 Ga0316593_10103308 3300032168 Bacteria 1013
57 Ga0316593_10119233 3300032168 Bacteria 946
58 Ga0316593_10121009 3300032168 Bacteria 940
59 Ga0316593_10156687 3300032168 Bacteria 830
60 Ga0316593_10168955 3300032168 Bacteria 801
61 Ga0316593_10185806 3300032168 Bacteria 765
62 Ga0316593_10192372 3300032168 Bacteria 752
63 Ga0316593_10202013 3300032168 Bacteria 735
64 Ga0316593_10233143 3300032168 Bacteria 686
65 Ga0316593_10289080 3300032168 Bacteria 619
66 Ga0316593_10289762 3300032168 Bacteria 618
67 Ga0316593_10299612 3300032168 Bacteria 608
68 Ga0316593_10321656 3300032168 Bacteria 588
69 Ga0316592_1001616 3300033524 Bacteria 3695
70 Ga0316592_1002393 3300033524 Bacteria 3237
71 Ga0316592_1002839 3300033524 Bacteria 3046
72 Ga0316592_1006095 3300033524 Bacteria 2313
73 Ga0316592_1012087 3300033524 Bacteria 1764
74 Ga0316592_1024412 3300033524 Bacteria 1300
75 Ga0316592_1026301 3300033524 Bacteria 1256
76 Ga0316592_1027965 3300033524 Bacteria 1220
77 Ga0316592_1032359 3300033524 Bacteria 1141
78 Ga0316592_1044135 3300033524 Bacteria 990
79 Ga0316592_1131922 3300033524 Bacteria 583
80 Ga0316592_1150767 3300033524 Bacteria 548
81 Ga0316586_1018756 3300033527 Bacteria 1125
82 Ga0316586_1050005 3300033527 Bacteria 747
83 Ga0316588_1015940 3300033528 Bacteria 1660
84 Ga0316588_1062708 3300033528 Bacteria 908
85 Ga0316588_1118024 3300033528 Bacteria 670
86 Ga0316588_1150938 3300033528 Bacteria 596
87 Ga0316588_1162299 3300033528 Bacteria 576
88 Ga0316588_1197931 3300033528 Bacteria 525
89 Ga0316587_1051115 3300033529 Bacteria 757
90 Ga0316596_1000106 3300033541 Bacteria 10634
91 Ga0316596_1001043 3300033541 Bacteria 5368
92 Ga0316596_1010716 3300033541 Bacteria 2226
93 Ga0316596_1012722 3300033541 Bacteria 2073
94 Ga0316596_1015079 3300033541 Bacteria 1923
95 Ga0316596_1016318 3300033541 Bacteria 1859
96 Ga0316596_1017057 3300033541 Bacteria 1823
97 Ga0316596_1025223 3300033541 Bacteria 1529
98 Ga0316596_1025532 3300033541 Bacteria 1520
99 Ga0316596_1038943 3300033541 Bacteria 1247
100 Ga0316596_1059696 3300033541 Bacteria 1017
101 Ga0316596_1067314 3300033541 Bacteria 958
102 Ga0316596_1088119 3300033541 Bacteria 836
103 Ga0316596_1096481 3300033541 Bacteria 798
104 Ga0316596_1131702 3300033541 Bacteria 683
105 Ga0316596_1140334 3300033541 Bacteria 661
106 Ga0316596_1178953 3300033541 Bacteria 587
107 Ga0316574_0051935 3300035398 Bacteria 2556
108 Ga0316574_0065061 3300035398 Bacteria 2295
109 Ga0316574_0114903 3300035398 Bacteria 1726
110 Ga0316574_0136060 3300035398 Bacteria 1582
111 Ga0316574_0260030 3300035398 Bacteria 1108
112 Ga0316574_0566730 3300035398 Bacteria 704
113 Ga0316582_0123419 3300036647 Bacteria 1735
114 Ga0316582_0179690 3300036647 Bacteria 1439
115 Ga0316582_0853935 3300036647 Unclassified 623
116 Ga0316582_0997924 3300036647 Bacteria 571
117 Ga0316584_0001842 3300036712 Bacteria 13121
118 Ga0316584_0015050 3300036712 Bacteria 5526
119 Ga0316584_0020181 3300036712 Bacteria 4827
120 Ga0316584_0037517 3300036712 Bacteria 3601
121 Ga0316584_0315205 3300036712 Bacteria 1130
122 Ga0316584_0361091 3300036712 Unclassified 1041
123 Ga0316584_0556797 3300036712 Bacteria 800
124 Ga0316584_0562441 3300036712 Bacteria 795
125 Ga0316584_0868127 3300036712 Unclassified 609
126 Ga0316581_0261639 3300037588 Bacteria 531
127 Ga0400489_59783 3300039093 Bacteria 3534
128 Ga0400489_83287 3300039093 Bacteria 1093
129 Ga0451787_768988 3300041441 Bacteria 660
130 Ga0451795_0319454 3300041456 Bacteria 1156
131 Ga0451795_0804787 3300041456 Bacteria 783
132 Ga0451795_0935357 3300041456 Bacteria 2876
133 Ga0451795_0944808 3300041456 Bacteria 614
134 Ga0451795_1055450 3300041456 Bacteria 735
135 Ga0451837_1825053 3300041494 Bacteria 571
136 Ga0451855_0017304 3300041511 Bacteria 848
137 Ga0451855_0133354 3300041511 Bacteria 1612
138 Ga0451855_1056930 3300041511 Bacteria 1385
139 Ga0451577_0000092 3300042876 Bacteria 198898
140 Ga0451577_0000433 3300042876 Bacteria 74789
141 Ga0451577_0005144 3300042876 Bacteria 13458
142 Ga0451577_0038846 3300042876 Bacteria 4280
143 Ga0451577_0080589 3300042876 Bacteria 2903
144 Ga0451577_0101593 3300042876 Bacteria 2569
145 Ga0451577_0124402 3300042876 Bacteria 2311
146 Ga0451577_0132072 3300042876 Bacteria 2240
147 Ga0451577_0143230 3300042876 Bacteria 2148
148 Ga0451577_0144589 3300042876 Bacteria 2138
149 Ga0451577_0175874 3300042876 Bacteria 1929
150 Ga0451577_0193442 3300042876 Bacteria 1835
151 Ga0451577_0222506 3300042876 Bacteria 1706
152 Ga0451577_0222545 3300042876 Bacteria 1706
153 Ga0451577_0314540 3300042876 Bacteria 1419
154 Ga0451577_0451561 3300042876 Bacteria 1167
155 Ga0451577_0523255 3300042876 Bacteria 1077
156 Ga0451577_0575308 3300042876 Bacteria 1022
157 Ga0451577_0589285 3300042876 Bacteria 1009
158 Ga0451577_0732881 3300042876 Bacteria 894
159 Ga0451577_1277390 3300042876 Bacteria 653
160 Ga0451577_1395199 3300042876 Bacteria 621
161 Ga0451577_1561878 3300042876 Bacteria 583
162 Ga0453683_0000055 3300044673 Bacteria 192588
163 Ga0453683_0000522 3300044673 Bacteria 43145
164 Ga0453683_0000935 3300044673 Bacteria 27791
165 Ga0453683_0007013 3300044673 Bacteria 7678
166 Ga0453683_0007526 3300044673 Bacteria 7375
167 Ga0453683_0012583 3300044673 Bacteria 5543
168 Ga0453683_0014569 3300044673 Bacteria 5101
169 Ga0453683_0022763 3300044673 Bacteria 3995
170 Ga0453683_0041330 3300044673 Bacteria 2895
171 Ga0453683_0056210 3300044673 Bacteria 2462
172 Ga0453683_0106938 3300044673 Bacteria 1758
173 Ga0453683_0176231 3300044673 Bacteria 1355
174 Ga0453683_0626564 3300044673 Bacteria 702
175 Ga0453683_0749742 3300044673 Bacteria 641
176 Ga0453683_0785411 3300044673 Bacteria 626
177 Ga0453683_0922751 3300044673 Unclassified 578
178 Ga0453683_0943822 3300044673 Bacteria 571
179 Ga0453683_1092939 3300044673 Bacteria 531
180 Ga0453684_0000440 3300044712 Bacteria 169397
181 Ga0453684_0000506 3300044712 Bacteria 152143
182 Ga0453684_0001121 3300044712 Bacteria 83919
183 Ga0453684_0001193 3300044712 Bacteria 80343
184 Ga0453684_0001382 3300044712 Bacteria 70292
185 Ga0453684_0001549 3300044712 Bacteria 64220
186 Ga0453684_0004131 3300044712 Bacteria 31439
187 Ga0453684_0012068 3300044712 Bacteria 14349
188 Ga0453684_0012598 3300044712 Bacteria 13911
189 Ga0453684_0013573 3300044712 Bacteria 13209
190 Ga0453684_0014056 3300044712 Bacteria 12880
191 Ga0453684_0025154 3300044712 Bacteria 8657
192 Ga0453684_0032398 3300044712 Bacteria 7316
193 Ga0453684_0032953 3300044712 Bacteria 7234
194 Ga0453684_0038585 3300044712 Bacteria 6526
195 Ga0453684_0043553 3300044712 Bacteria 6030
196 Ga0453684_0048058 3300044712 Bacteria 5649
197 Ga0453684_0055899 3300044712 Bacteria 5126
198 Ga0453684_0056141 3300044712 Bacteria 5111
199 Ga0453684_0079180 3300044712 Bacteria 4108
200 Ga0453684_0108947 3300044712 Bacteria 3370
201 Ga0453684_0133883 3300044712 Bacteria 2970
202 Ga0453684_0168210 3300044712 Bacteria 2586
203 Ga0453684_0172588 3300044712 Bacteria 2546
204 Ga0453684_0238528 3300044712 Bacteria 2095
205 Ga0453684_0261448 3300044712 Bacteria 1982
206 Ga0453684_0313759 3300044712 Bacteria 1778
207 Ga0453684_0434183 3300044712 Bacteria 1464
208 Ga0453684_0745932 3300044712 Bacteria 1060
209 Ga0453684_0788605 3300044712 Bacteria 1025
210 Ga0453684_0853396 3300044712 Bacteria 978
211 Ga0453684_0861326 3300044712 Bacteria 973
212 Ga0453684_1009294 3300044712 Bacteria 884
213 Ga0453684_1042544 3300044712 Bacteria 867
214 Ga0453684_1061243 3300044712 Bacteria 858
215 Ga0453684_1117279 3300044712 Bacteria 832
216 Ga0453684_1470795 3300044712 Bacteria 704
217 Ga0453684_1713277 3300044712 Bacteria 642
218 Ga0451576_0000113 3300045051 Bacteria 208644
219 Ga0451576_0000204 3300045051 Bacteria 149459
220 Ga0451576_0003461 3300045051 Bacteria 21644
221 Ga0451576_0005920 3300045051 Bacteria 15147
222 Ga0451576_0011813 3300045051 Bacteria 9886
223 Ga0451576_0016217 3300045051 Bacteria 8228
224 Ga0451576_0028432 3300045051 Bacteria 5988
225 Ga0451576_0032623 3300045051 Bacteria 5541
226 Ga0451576_0053102 3300045051 Bacteria 4246
227 Ga0451576_0054946 3300045051 Bacteria 4167
228 Ga0451576_0056132 3300045051 Bacteria 4119
229 Ga0451576_0125877 3300045051 Bacteria 2670
230 Ga0451576_0182356 3300045051 Bacteria 2192
231 Ga0451576_0195911 3300045051 Bacteria 2110
232 Ga0451576_0239153 3300045051 Bacteria 1897
233 Ga0451576_0240695 3300045051 Bacteria 1890
234 Ga0451576_0271918 3300045051 Bacteria 1771
235 Ga0451576_0290342 3300045051 Bacteria 1710
236 Ga0451576_0319879 3300045051 Bacteria 1623
237 Ga0451576_0494727 3300045051 Bacteria 1284
238 Ga0451576_1277435 3300045051 Bacteria 765
239 Ga0451576_2035519 3300045051 Bacteria 591
240 Ga0501082_0858882 3300060353 Bacteria 794
241 Ga0316574_0061132
242 Ga0265337_1149751
243 Ga0265334_10054708
244 Ga0265323_10000040
245 Ga0265323_10060536
246 Ga0265323_10167198
247 Ga0265323_10292009
248 Ga0265322_10023100
249 Ga0265322_10110402
250 Ga0265322_10153338
251 Ga0265336_10026760
252 Ga0265330_10129584
253 Ga0265328_10090442
254 Ga0265329_10199432
255 Ga0265327_10000370
256 Ga0265327_10089061
257 Ga0265316_10000486
258 Ga0265316_10002446
259 Ga0265316_10004409
260 Ga0265316_10042062
261 Ga0265316_10245238
262 Ga0265316_10265089
263 Ga0265342_10073798
264 Ga0265342_10121575
265 Ga0316576_10001081
266 Ga0316576_10010880
267 Ga0316576_10022758
268 Ga0316576_10034114
269 Ga0316576_10056945
270 Ga0316576_10079789
271 Ga0316576_10143122
272 Ga0316576_10222150
273 Ga0316576_10234620
274 Ga0316576_10440167
275 Ga0316576_10590477
276 Ga0316578_10009003
277 Ga0316578_10040210
278 Ga0316578_10141678
279 Ga0316578_10382861
280 Ga0316578_10402380
281 Ga0316578_10877747
282 Ga0316577_10016238
283 Ga0316577_10530231
284 Ga0316585_10055577
285 Ga0316585_10318282
286 Ga0316580_10073011
287 Ga0316580_10222986
288 Ga0316593_10000201
289 Ga0316593_10000279
290 Ga0316593_10008603
291 Ga0316593_10023936
292 Ga0316593_10024370
293 Ga0316593_10052376
294 Ga0316593_10076758
295 Ga0316593_10081391
296 Ga0316593_10103308
297 Ga0316593_10119233
298 Ga0316593_10121009
299 Ga0316593_10156687
300 Ga0316593_10168955
301 Ga0316593_10185806
302 Ga0316593_10192372
303 Ga0316593_10202013
304 Ga0316593_10233143
305 Ga0316593_10289080
306 Ga0316593_10289762
307 Ga0316593_10299612
308 Ga0316593_10321656
309 Ga0316592_1001616
310 Ga0316592_1002393
311 Ga0316592_1002839
312 Ga0316592_1006095
313 Ga0316592_1012087
314 Ga0316592_1024412
315 Ga0316592_1026301
316 Ga0316592_1027965
317 Ga0316592_1032359
318 Ga0316592_1044135
319 Ga0316592_1131922
320 Ga0316592_1150767
321 Ga0316586_1018756
322 Ga0316586_1050005
323 Ga0316588_1015940
324 Ga0316588_1062708
325 Ga0316588_1118024
326 Ga0316588_1150938
327 Ga0316588_1162299
328 Ga0316588_1197931
329 Ga0316587_1051115
330 Ga0316596_1000106
331 Ga0316596_1001043
332 Ga0316596_1010716
333 Ga0316596_1012722
334 Ga0316596_1015079
335 Ga0316596_1016318
336 Ga0316596_1017057
337 Ga0316596_1025223
338 Ga0316596_1025532
339 Ga0316596_1038943
340 Ga0316596_1059696
341 Ga0316596_1067314
342 Ga0316596_1088119
343 Ga0316596_1096481
344 Ga0316596_1131702
345 Ga0316596_1140334
346 Ga0316596_1178953
347 Ga0316574_0051935
348 Ga0316574_0065061
349 Ga0316574_0114903
350 Ga0316574_0136060
351 Ga0316574_0260030
352 Ga0316574_0566730
353 Ga0316582_0123419
354 Ga0316582_0179690
355 Ga0316582_0853935
356 Ga0316582_0997924
357 Ga0316584_0001842
358 Ga0316584_0015050
359 Ga0316584_0020181
360 Ga0316584_0037517
361 Ga0316584_0315205
362 Ga0316584_0361091
363 Ga0316584_0556797
364 Ga0316584_0562441
365 Ga0316584_0868127
366 Ga0316581_0261639
367 Ga0400489_59783
368 Ga0400489_83287
369 Ga0451787_768988
370 Ga0451795_0319454
371 Ga0451795_0804787
372 Ga0451795_0935357
373 Ga0451795_0944808
374 Ga0451795_1055450
375 Ga0451837_1825053
376 Ga0451855_0017304
377 Ga0451855_0133354
378 Ga0451855_1056930
379 Ga0451577_0000092
380 Ga0451577_0000433
381 Ga0451577_0005144
382 Ga0451577_0038846
383 Ga0451577_0080589
384 Ga0451577_0101593
385 Ga0451577_0124402
386 Ga0451577_0132072
387 Ga0451577_0143230
388 Ga0451577_0144589
389 Ga0451577_0175874
390 Ga0451577_0193442
391 Ga0451577_0222506
392 Ga0451577_0222545
393 Ga0451577_0314540
394 Ga0451577_0451561
395 Ga0451577_0523255
396 Ga0451577_0575308
397 Ga0451577_0589285
398 Ga0451577_0732881
399 Ga0451577_1277390
400 Ga0451577_1395199
401 Ga0451577_1561878
402 Ga0453683_0000055
403 Ga0453683_0000522
404 Ga0453683_0000935
405 Ga0453683_0007013
406 Ga0453683_0007526
407 Ga0453683_0012583
408 Ga0453683_0014569
409 Ga0453683_0022763
410 Ga0453683_0041330
411 Ga0453683_0056210
412 Ga0453683_0106938
413 Ga0453683_0176231
414 Ga0453683_0626564
415 Ga0453683_0749742
416 Ga0453683_0785411
417 Ga0453683_0922751
418 Ga0453683_0943822
419 Ga0453683_1092939
420 Ga0453684_0000440
421 Ga0453684_0000506
422 Ga0453684_0001121
423 Ga0453684_0001193
424 Ga0453684_0001382
425 Ga0453684_0001549
426 Ga0453684_0004131
427 Ga0453684_0012068
428 Ga0453684_0012598
429 Ga0453684_0013573
430 Ga0453684_0014056
431 Ga0453684_0025154
432 Ga0453684_0032398
433 Ga0453684_0032953
434 Ga0453684_0038585
435 Ga0453684_0043553
436 Ga0453684_0048058
437 Ga0453684_0055899
438 Ga0453684_0056141
439 Ga0453684_0079180
440 Ga0453684_0108947
441 Ga0453684_0133883
442 Ga0453684_0168210
443 Ga0453684_0172588
444 Ga0453684_0238528
445 Ga0453684_0261448
446 Ga0453684_0313759
447 Ga0453684_0434183
448 Ga0453684_0745932
449 Ga0453684_0788605
450 Ga0453684_0853396
451 Ga0453684_0861326
452 Ga0453684_1009294
453 Ga0453684_1042544
454 Ga0453684_1061243
455 Ga0453684_1117279
456 Ga0453684_1470795
457 Ga0453684_1713277
458 Ga0451576_0000113
459 Ga0451576_0000204
460 Ga0451576_0003461
461 Ga0451576_0005920
462 Ga0451576_0011813
463 Ga0451576_0016217
464 Ga0451576_0028432
465 Ga0451576_0032623
466 Ga0451576_0053102
467 Ga0451576_0054946
468 Ga0451576_0056132
469 Ga0451576_0125877
470 Ga0451576_0182356
471 Ga0451576_0195911
472 Ga0451576_0239153
473 Ga0451576_0240695
474 Ga0451576_0271918
475 Ga0451576_0290342
476 Ga0451576_0319879
477 Ga0451576_0494727
478 Ga0451576_1277435
479 Ga0451576_2035519
480 Ga0501082_0858882

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00366

Ribosomal_S17

Ribosomal protein S17

20

87

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pkq-assembly1.cif.gz_q small subunit of the chlamydomonas reinhardtii mitoribosome 0.9685 10 85
4v4w-assembly1.cif.gz_AQ structure of a secm-stalled e. coli ribosome complex obtained by fitting atomic models for rna and protein components into cryo-em map emd-1143 0.9645 8 83
6spc-assembly1.cif.gz_q pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate 0.9618 8 83
5xyu-assembly1.cif.gz_Q small subunit of mycobacterium smegmatis ribosome 0.9597 7 84
4v8c-assembly1.cif.gz_CT crystal structure analysis of ribosomal decoding (near-cognate trna-leu complex with paromomycin). 0.9562 7 84
ID Description Score Start End Superfamily
af_Q2FW15_6_86_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9686 7 84 2.40.50.140
af_C6T0V9_1_79_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9673 8 85 2.40.50.140
5xyuQ00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9597 7 84 2.40.50.140
af_Q9LHN1_1_100_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9595 8 85 2.40.50.140
af_Q03246_1_107_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9565 7 83 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7Y8L3F6-F1-model_v4 Small ribosomal subunit protein uS17 0.9925 6 84 GO:0003735
GO:0006412
GO:0019843
GO:0022627
AF-A0A523D2W8-F1-model_v4 Small ribosomal subunit protein uS17 0.9891 8 83 GO:0003735
GO:0006412
GO:0019843
GO:0022627
AF-A0A3L7BYX1-F1-model_v4 Small ribosomal subunit protein uS17 0.9873 7 85 GO:0003735
GO:0006412
GO:0019843
GO:0022627
AF-A0A800EEB7-F1-model_v4 deleted 0.987 7 84
AF-A0A1F5AHR6-F1-model_v4 30S ribosomal protein S17 0.9868 7 81 GO:0003735
GO:0006412
GO:0019843
GO:0022627

Map