F352437

General Info

Members Datasets Scaffolds Average Seq Length
239 182 478 381

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054609563|8054610288
Length 433
Sequence RDVGPLAYPRRVPSLRDATAESPAPVRAVVNAVTQWIDKLGSVWVEGQIAQVNRRPGVNTVFMTLRDTVADISVTLTCARSLFDSMNPPLVEGASVVVHARPTFYANRGSFSLSAREIKMVGLGELLARLERRRQLLAAEGLFAPELKRDLPFLPGRVGLVTAPNSAAERDVLDNARRRWPAVQFEVCYAAMQGQRATTEVIEALQRLERNPAVDVIVVARGGGSIEDLLPFSDEALVRAVHALRTPVVSAIGHEPDQPLLDLVADVRASTPTDAAKLVVPDIAEEAHGVTWARDRLRQVITQRIAREQEWLAQVRSRPAMADPRNLLAVRSDELDELLARARRTLSHRLDRAADDIGHQRARAQALSPLATLQRGYAVLQNADGHVVASVAQATTGTAVSVRVADGRIHATTDRIEPDAITTDHPPQEDPDE

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
80 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
158 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
162 2643221576 Nocardioides sp. Root614 Isolate Unclassified
163 2643221590 Nocardioides sp. Root682 Isolate Unclassified
164 2643221604 Nocardioides sp. Root190 Isolate Unclassified
165 2643221615 Nocardioides sp. Root224 Isolate Unclassified
166 2643221617 Nocardioides sp. Root79 Isolate Unclassified
167 2643221620 Nocardioides sp. Root240 Isolate Unclassified
168 2643221641 Nocardioides sp. Root122 Isolate Unclassified
169 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
170 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
171 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
172 2738541305 Nocardioides sp. CF167 Isolate Unclassified
173 2739367898 Nocardioides sp. CF479 Isolate Unclassified
174 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
175 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
176 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
177 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
178 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
179 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
180 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
181 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
182 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 89.96
Metatranscriptomes 0.84
Isolates 9.21

Biome Distribution

Category Percentage (%)
Aerial Root 0.84
Bulb 0
Endosphere 15.06
Nodule 0.42
Rhizoplane 5.44
Rhizosphere 67.78
Stem 0
Stem Tuber 0
Unclassified 0.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10020609 3300003320 Bacteria 4379
2 Ga0068869_100049958 3300005334 Bacteria 3030
3 Ga0070666_10120541 3300005335 Bacteria 1819
4 Ga0070680_100031895 3300005336 Bacteria 4237
5 Ga0070682_100004762 3300005337 Bacteria 7543
6 Ga0070673_100067546 3300005364 Bacteria 2859
7 Ga0070659_100024790 3300005366 Bacteria 4601
8 Ga0070667_100023904 3300005367 Bacteria 5075
9 Ga0070667_100060892 3300005367 Bacteria 3195
10 Ga0070709_10005291 3300005434 Bacteria 6987
11 Ga0070714_100018628 3300005435 Bacteria 5644
12 Ga0070713_100009783 3300005436 Bacteria 6892
13 Ga0070678_100008295 3300005456 Bacteria 6217
14 Ga0070681_10013781 3300005458 Bacteria 8048
15 Ga0070685_10006035 3300005466 Bacteria 6174
16 Ga0070679_100046364 3300005530 Bacteria 4332
17 Ga0068853_100261638 3300005539 Bacteria 1591
18 Ga0070693_100001403 3300005547 Bacteria 10857
19 Ga0068854_100037217 3300005578 Bacteria 3414
20 Ga0068856_100011178 3300005614 Bacteria 8715
21 Ga0070702_100002974 3300005615 Bacteria 7487
22 Ga0068852_100003020 3300005616 Bacteria 11705
23 Ga0068864_100112777 3300005618 Bacteria 2423
24 Ga0068870_10000528 3300005840 Bacteria 14400
25 Ga0068858_100054036 3300005842 Bacteria 3714
26 Ga0068860_100000408 3300005843 Bacteria 55871
27 Ga0081539_10037783 3300005985 Bacteria 2870
28 Ga0075365_10000814 3300006038 Bacteria 12845
29 Ga0075365_10013969 3300006038 Bacteria 4820
30 Ga0075365_10058512 3300006038 Bacteria 2566
31 Ga0075365_10070465 3300006038 Bacteria 2351
32 Ga0075365_10095911 3300006038 Bacteria 2026
33 Ga0075368_10001977 3300006042 Bacteria 6612
34 Ga0075363_100001798 3300006048 Bacteria 8386
35 Ga0075363_100045310 3300006048 Bacteria 2332
36 Ga0075363_100069779 3300006048 Bacteria 1907
37 Ga0075364_10002655 3300006051 Bacteria 10039
38 Ga0075364_10080611 3300006051 Bacteria 2152
39 Ga0075370_10002069 3300006353 Bacteria 9133
40 Ga0075370_10007852 3300006353 Bacteria 5459
41 Ga0075370_10021302 3300006353 Bacteria 3552
42 Ga0075434_100033974 3300006871 Bacteria 5034
43 Ga0075436_100002718 3300006914 Bacteria 12164
44 Ga0075435_100003407 3300007076 Bacteria 10783
45 Ga0105245_10206302 3300009098 Bacteria 1889
46 Ga0105247_10023890 3300009101 Bacteria 3683
47 Ga0105241_10004028 3300009174 Bacteria 10872
48 Ga0105239_10071848 3300010375 Bacteria 3802
49 Ga0105246_10003275 3300011119 Bacteria 9807
50 Ga0157369_10155832 3300013105 Bacteria 2412
51 Ga0157369_10227363 3300013105 Bacteria 1951
52 Ga0157374_10019549 3300013296 Bacteria 5996
53 Ga0157372_10034053 3300013307 Bacteria 5597
54 Ga0157375_10064230 3300013308 Bacteria 3654
55 Ga0163163_10140298 3300014325 Bacteria 2459
56 Ga0182008_10015594 3300014497 Bacteria 3961
57 Ga0163161_10121573 3300017792 Bacteria 1962
58 Ga0206353_10186891 3300020082 Bacteria 2212
59 Ga0224712_10026984 3300022467 Unclassified 2038
60 Ga0207688_10005887 3300025901 Bacteria 6674
61 Ga0207699_10004328 3300025906 Bacteria 6793
62 Ga0207643_10000961 3300025908 Bacteria 17300
63 Ga0207705_10004749 3300025909 Bacteria 10232
64 Ga0207654_10002180 3300025911 Bacteria 10020
65 Ga0207660_10011783 3300025917 Bacteria 5700
66 Ga0207660_10098180 3300025917 Bacteria 2184
67 Ga0207657_10146959 3300025919 Bacteria 1922
68 Ga0207649_10006928 3300025920 Bacteria 6162
69 Ga0207652_10033352 3300025921 Bacteria 4335
70 Ga0207652_10093244 3300025921 Bacteria 2650
71 Ga0207650_10007822 3300025925 Bacteria 7283
72 Ga0207700_10073411 3300025928 Bacteria 2642
73 Ga0207664_10033475 3300025929 Bacteria 3948
74 Ga0207644_10027821 3300025931 Bacteria 3908
75 Ga0207690_10044165 3300025932 Bacteria 2936
76 Ga0207691_10077255 3300025940 Bacteria 3000
77 Ga0207691_10077349 3300025940 Bacteria 2998
78 Ga0207689_10001674 3300025942 Bacteria 21049
79 Ga0207661_10002035 3300025944 Bacteria 13945
80 Ga0207667_10055340 3300025949 Bacteria 4170
81 Ga0207640_10101973 3300025981 Bacteria 2015
82 Ga0207658_10130774 3300025986 Bacteria 2016
83 Ga0207658_10207434 3300025986 Bacteria 1640
84 Ga0207639_10229079 3300026041 Bacteria 1609
85 Ga0207678_10000971 3300026067 Bacteria 26124
86 Ga0207708_10003134 3300026075 Bacteria 12171
87 Ga0207702_10009806 3300026078 Bacteria 8032
88 Ga0207702_10016703 3300026078 Bacteria 6075
89 Ga0207676_10001902 3300026095 Bacteria 15246
90 Ga0207675_100322760 3300026118 Bacteria 1508
91 Ga0207683_10000208 3300026121 Bacteria 50925
92 Ga0207683_10051472 3300026121 Bacteria 3608
93 Ga0209813_10001501 3300027866 Bacteria 5252
94 Ga0207428_10075135 3300027907 Bacteria 2649
95 Ga0268264_10000462 3300028381 Bacteria 55077
96 Ga0307509_10006613 3300031507 Bacteria 15494
97 Ga0307508_10161261 3300031616 Bacteria 1846
98 Ga0307409_100219999 3300031995 Bacteria 1714
99 Ga0307414_10193709 3300032004 Bacteria 1647
100 Ga0307415_100030286 3300032126 Bacteria 3471
101 Ga0307507_10009504 3300033179 Bacteria 12915
102 Ga0373943_0108862 3300035170 Bacteria 1459
103 Ga0395900_0068635 3300037418 Bacteria 3643
104 Ga0395901_0084435 3300038443 Bacteria 3319
105 Ga0466961_0009634 3300044693 Bacteria 6150
106 Ga0466961_0045397 3300044693 Bacteria 2811
107 Ga0466963_0070145 3300044694 Bacteria 2357
108 Ga0466963_0189356 3300044694 Bacteria 1437
109 Ga0466971_0012473 3300044719 Bacteria 3726
110 Ga0466970_0008918 3300044765 Bacteria 5058
111 Ga0466970_0014978 3300044765 Bacteria 3987
112 Ga0466970_0048070 3300044765 Bacteria 2274
113 Ga0466957_0053694 3300044842 Bacteria 2457
114 Ga0466957_0086565 3300044842 Bacteria 1958
115 Ga0466960_0026003 3300044901 Bacteria 2654
116 Ga0466960_0040298 3300044901 Bacteria 2208
117 Ga0466959_0000176 3300045049 Bacteria 42306
118 Ga0466967_0013426 3300045976 Bacteria 6328
119 Ga0495592_0053637 3300046454 Bacteria 2990
120 Ga0495629_0024659 3300046459 Bacteria 4282
121 Ga0495651_0004137 3300046462 Bacteria 11115
122 Ga0495653_0012958 3300046463 Bacteria 6802
123 Ga0495662_0000926 3300046476 Bacteria 14345
124 Ga0495664_0009079 3300046477 Bacteria 5559
125 Ga0495608_0009188 3300046511 Bacteria 6911
126 Ga0495630_0216317 3300046517 Bacteria 1463
127 Ga0495652_0003957 3300046529 Bacteria 14358
128 Ga0495652_0038654 3300046529 Bacteria 4132
129 Ga0495586_0003398 3300046535 Bacteria 8536
130 Ga0495645_0016757 3300046543 Bacteria 5242
131 Ga0495645_0143395 3300046543 Bacteria 1665
132 Ga0495635_0019021 3300046663 Bacteria 4794
133 Ga0495657_0027285 3300046675 Bacteria 4032
134 Ga0495646_0034354 3300046680 Bacteria 3149
135 Ga0495613_0024424 3300046689 Bacteria 4503
136 Ga0495604_0003003 3300047317 Bacteria 13500
137 Ga0495676_0018126 3300047321 Bacteria 6210
138 Ga0495684_0028686 3300047471 Bacteria 4272
139 Ga0495593_0154674 3300047673 Bacteria 1159
140 Ga0495602_0206275 3300048088 Bacteria 1495
141 Ga0496102_0150010 3300048905 Bacteria 2190
142 Ga0496104_0004120 3300048907 Bacteria 12624
143 Ga0496106_0024758 3300048909 Bacteria 4464
144 Ga0496107_0134876 3300048910 Bacteria 1824
145 Ga0496109_0086464 3300048912 Bacteria 2895
146 Ga0496109_0092950 3300048912 Bacteria 2790
147 Ga0496110_0015750 3300048913 Bacteria 6301
148 Ga0496111_0315676 3300048914 Bacteria 1158
149 Ga0496114_0008636 3300048917 Bacteria 8074
150 Ga0496114_0019353 3300048917 Bacteria 5516
151 Ga0496114_0046602 3300048917 Bacteria 3603
152 Ga0496114_0134534 3300048917 Bacteria 2137
153 Ga0496115_0214198 3300048918 Bacteria 1591
154 Ga0496122_0050159 3300048925 Bacteria 3186
155 Ga0496123_0036906 3300048926 Bacteria 3457
156 Ga0501031_0055468 3300049568 Bacteria 2582
157 Ga0501031_0146901 3300049568 Bacteria 1541
158 Ga0501032_0015794 3300049569 Bacteria 5324
159 Ga0501034_0073138 3300049571 Bacteria 3437
160 Ga0501036_0009874 3300049572 Bacteria 7859
161 Ga0501036_0207162 3300049572 Bacteria 1648
162 Ga0501037_0048454 3300049573 Bacteria 3113
163 Ga0501037_0142433 3300049573 Bacteria 1715
164 Ga0501038_0000471 3300049574 Bacteria 35396
165 Ga0501038_0014345 3300049574 Bacteria 7220
166 Ga0501039_0024327 3300049575 Bacteria 4651
167 Ga0501039_0027504 3300049575 Bacteria 4373
168 Ga0501039_0043487 3300049575 Bacteria 3470
169 Ga0501039_0268441 3300049575 Bacteria 1341
170 Ga0501041_0082852 3300049577 Bacteria 1977
171 Ga0501042_0008114 3300049578 Bacteria 6914
172 Ga0501042_0051865 3300049578 Bacteria 2926
173 Ga0501043_0015280 3300049579 Bacteria 6013
174 Ga0501043_0045594 3300049579 Bacteria 3448
175 Ga0501046_0000383 3300049580 Bacteria 44303
176 Ga0501046_0008456 3300049580 Bacteria 8973
177 Ga0501046_0017395 3300049580 Bacteria 6001
178 Ga0501047_0043504 3300049581 Bacteria 4338
179 Ga0501048_0013742 3300049582 Bacteria 6006
180 Ga0501070_0080569 3300049586 Bacteria 2694
181 Ga0501073_0054476 3300049589 Bacteria 2800
182 Ga0501073_0058430 3300049589 Bacteria 2695
183 Ga0501074_0122638 3300049590 Bacteria 1859
184 Ga0501074_0192569 3300049590 Bacteria 1454
185 Ga0501080_0119667 3300049742 Bacteria 2441
186 Ga0501035_0012045 3300049822 Bacteria 8000
187 Ga0501035_0179985 3300049822 Bacteria 1821
188 Ga0501044_0013672 3300049823 Bacteria 8772
189 Ga0501045_0085636 3300049824 Bacteria 2326
190 nmdc:mga03683_37895_c1 3300050489 Bacteria 1967
191 nmdc:mga03n38_24456_c1 3300050490 Bacteria 2470
192 nmdc:mga03n38_31345_c1 3300050490 Bacteria 2243
193 nmdc:mga00v17_1011_c1 3300050491 Bacteria 15046
194 nmdc:mga00v17_116045_c1 3300050491 Bacteria 1702
195 nmdc:mga00v17_19438_c1 3300050491 Bacteria 3877
196 nmdc:mga00v17_51160_c1 3300050491 Bacteria 2512
197 nmdc:mga00v17_66354_c1 3300050491 Bacteria 2228
198 nmdc:mga00v17_68847_c1 3300050491 Bacteria 2188
199 nmdc:mga0yw44_112555_c1 3300050492 Bacteria 1746
200 nmdc:mga0yw44_44640_c1 3300050492 Bacteria 2652
201 nmdc:mga0yw44_72126_c1 3300050492 Bacteria 2146
202 nmdc:mga0yw44_83121_c1 3300050492 Bacteria 2011
203 nmdc:mga0yw44_85177_c1 3300050492 Bacteria 1654
204 nmdc:mga0yw44_993_c1 3300050492 Bacteria 10822
205 nmdc:mga06z11_12518_c1 3300050494 Bacteria 3693
206 nmdc:mga06z11_72600_c1 3300050494 Bacteria 1825
207 nmdc:mga04h51_4004_c1 3300050495 Bacteria 3628
208 nmdc:mga07m45_125405_c1 3300050496 Bacteria 1485
209 nmdc:mga07m45_28032_c1 3300050496 Bacteria 3108
210 nmdc:mga05p37_187959_c1 3300050507 Bacteria 2510
211 nmdc:mga08y16_8996_c1 3300050511 Bacteria 10489
212 nmdc:mga08x19_13496_c1 3300050514 Bacteria 4941
213 Ga0495601_0015965 3300053077 Bacteria 4544
214 Ga0495601_0022823 3300053077 Bacteria 3844
215 Ga0495612_0005292 3300053078 Bacteria 5330
216 Ga0500644_0000393 3300053088 Bacteria 20880
217 Ga0466962_0000054 3300061719 Bacteria 47230
218 8054610288 8054609563 Bacteria 5170090
219 2643890209 2643221576 Bacteria 5214352
220 2643959265 2643221590 Bacteria 5214697
221 2644033278 2643221604 Bacteria 5014917
222 2644093465 2643221615 Bacteria 5487866
223 2644098199 2643221617 Bacteria 5139111
224 2644119073 2643221620 Bacteria 5134593
225 2644231040 2643221641 Bacteria 4490190
226 2644323075 2643221657 Bacteria 5490246
227 2644457801 2643221681 Bacteria 3707866
228 2644536710 2643221697 Bacteria 3575694
229 2738870023 2738541305 Bacteria 4910150
230 2740166377 2739367898 Bacteria 4367674
231 2774394039 2773857762 Bacteria 5971770
232 2809195089 2808606439 Bacteria 5952208
233 2812334429 2811994874 Bacteria 5367947
234 2812349974 2811994878 Bacteria 5992952
235 2855389384 2855386786 Bacteria 4752232
236 2857483959 2857481737 Bacteria 4761446
237 2891972410 2891968417 Bacteria 5821697
238 2984579298 2984576629 Bacteria 4248407
239 2990259810 2990256926 Bacteria 4252839
240 rootH2_10020609
241 Ga0068869_100049958
242 Ga0070666_10120541
243 Ga0070680_100031895
244 Ga0070682_100004762
245 Ga0070673_100067546
246 Ga0070659_100024790
247 Ga0070667_100023904
248 Ga0070667_100060892
249 Ga0070709_10005291
250 Ga0070714_100018628
251 Ga0070713_100009783
252 Ga0070678_100008295
253 Ga0070681_10013781
254 Ga0070685_10006035
255 Ga0070679_100046364
256 Ga0068853_100261638
257 Ga0070693_100001403
258 Ga0068854_100037217
259 Ga0068856_100011178
260 Ga0070702_100002974
261 Ga0068852_100003020
262 Ga0068864_100112777
263 Ga0068870_10000528
264 Ga0068858_100054036
265 Ga0068860_100000408
266 Ga0081539_10037783
267 Ga0075365_10000814
268 Ga0075365_10013969
269 Ga0075365_10058512
270 Ga0075365_10070465
271 Ga0075365_10095911
272 Ga0075368_10001977
273 Ga0075363_100001798
274 Ga0075363_100045310
275 Ga0075363_100069779
276 Ga0075364_10002655
277 Ga0075364_10080611
278 Ga0075370_10002069
279 Ga0075370_10007852
280 Ga0075370_10021302
281 Ga0075434_100033974
282 Ga0075436_100002718
283 Ga0075435_100003407
284 Ga0105245_10206302
285 Ga0105247_10023890
286 Ga0105241_10004028
287 Ga0105239_10071848
288 Ga0105246_10003275
289 Ga0157369_10155832
290 Ga0157369_10227363
291 Ga0157374_10019549
292 Ga0157372_10034053
293 Ga0157375_10064230
294 Ga0163163_10140298
295 Ga0182008_10015594
296 Ga0163161_10121573
297 Ga0206353_10186891
298 Ga0224712_10026984
299 Ga0207688_10005887
300 Ga0207699_10004328
301 Ga0207643_10000961
302 Ga0207705_10004749
303 Ga0207654_10002180
304 Ga0207660_10011783
305 Ga0207660_10098180
306 Ga0207657_10146959
307 Ga0207649_10006928
308 Ga0207652_10033352
309 Ga0207652_10093244
310 Ga0207650_10007822
311 Ga0207700_10073411
312 Ga0207664_10033475
313 Ga0207644_10027821
314 Ga0207690_10044165
315 Ga0207691_10077255
316 Ga0207691_10077349
317 Ga0207689_10001674
318 Ga0207661_10002035
319 Ga0207667_10055340
320 Ga0207640_10101973
321 Ga0207658_10130774
322 Ga0207658_10207434
323 Ga0207639_10229079
324 Ga0207678_10000971
325 Ga0207708_10003134
326 Ga0207702_10009806
327 Ga0207702_10016703
328 Ga0207676_10001902
329 Ga0207675_100322760
330 Ga0207683_10000208
331 Ga0207683_10051472
332 Ga0209813_10001501
333 Ga0207428_10075135
334 Ga0268264_10000462
335 Ga0307509_10006613
336 Ga0307508_10161261
337 Ga0307409_100219999
338 Ga0307414_10193709
339 Ga0307415_100030286
340 Ga0307507_10009504
341 Ga0373943_0108862
342 Ga0395900_0068635
343 Ga0395901_0084435
344 Ga0466961_0009634
345 Ga0466961_0045397
346 Ga0466963_0070145
347 Ga0466963_0189356
348 Ga0466971_0012473
349 Ga0466970_0008918
350 Ga0466970_0014978
351 Ga0466970_0048070
352 Ga0466957_0053694
353 Ga0466957_0086565
354 Ga0466960_0026003
355 Ga0466960_0040298
356 Ga0466959_0000176
357 Ga0466967_0013426
358 Ga0495592_0053637
359 Ga0495629_0024659
360 Ga0495651_0004137
361 Ga0495653_0012958
362 Ga0495662_0000926
363 Ga0495664_0009079
364 Ga0495608_0009188
365 Ga0495630_0216317
366 Ga0495652_0003957
367 Ga0495652_0038654
368 Ga0495586_0003398
369 Ga0495645_0016757
370 Ga0495645_0143395
371 Ga0495635_0019021
372 Ga0495657_0027285
373 Ga0495646_0034354
374 Ga0495613_0024424
375 Ga0495604_0003003
376 Ga0495676_0018126
377 Ga0495684_0028686
378 Ga0495593_0154674
379 Ga0495602_0206275
380 Ga0496102_0150010
381 Ga0496104_0004120
382 Ga0496106_0024758
383 Ga0496107_0134876
384 Ga0496109_0086464
385 Ga0496109_0092950
386 Ga0496110_0015750
387 Ga0496111_0315676
388 Ga0496114_0008636
389 Ga0496114_0019353
390 Ga0496114_0046602
391 Ga0496114_0134534
392 Ga0496115_0214198
393 Ga0496122_0050159
394 Ga0496123_0036906
395 Ga0501031_0055468
396 Ga0501031_0146901
397 Ga0501032_0015794
398 Ga0501034_0073138
399 Ga0501036_0009874
400 Ga0501036_0207162
401 Ga0501037_0048454
402 Ga0501037_0142433
403 Ga0501038_0000471
404 Ga0501038_0014345
405 Ga0501039_0024327
406 Ga0501039_0027504
407 Ga0501039_0043487
408 Ga0501039_0268441
409 Ga0501041_0082852
410 Ga0501042_0008114
411 Ga0501042_0051865
412 Ga0501043_0015280
413 Ga0501043_0045594
414 Ga0501046_0000383
415 Ga0501046_0008456
416 Ga0501046_0017395
417 Ga0501047_0043504
418 Ga0501048_0013742
419 Ga0501070_0080569
420 Ga0501073_0054476
421 Ga0501073_0058430
422 Ga0501074_0122638
423 Ga0501074_0192569
424 Ga0501080_0119667
425 Ga0501035_0012045
426 Ga0501035_0179985
427 Ga0501044_0013672
428 Ga0501045_0085636
429 nmdc:mga03683_37895_c1
430 nmdc:mga03n38_24456_c1
431 nmdc:mga03n38_31345_c1
432 nmdc:mga00v17_1011_c1
433 nmdc:mga00v17_116045_c1
434 nmdc:mga00v17_19438_c1
435 nmdc:mga00v17_51160_c1
436 nmdc:mga00v17_66354_c1
437 nmdc:mga00v17_68847_c1
438 nmdc:mga0yw44_112555_c1
439 nmdc:mga0yw44_44640_c1
440 nmdc:mga0yw44_72126_c1
441 nmdc:mga0yw44_83121_c1
442 nmdc:mga0yw44_85177_c1
443 nmdc:mga0yw44_993_c1
444 nmdc:mga06z11_12518_c1
445 nmdc:mga06z11_72600_c1
446 nmdc:mga04h51_4004_c1
447 nmdc:mga07m45_125405_c1
448 nmdc:mga07m45_28032_c1
449 nmdc:mga05p37_187959_c1
450 nmdc:mga08y16_8996_c1
451 nmdc:mga08x19_13496_c1
452 Ga0495601_0015965
453 Ga0495601_0022823
454 Ga0495612_0005292
455 Ga0500644_0000393
456 Ga0466962_0000054
457 8054610288
458 2643890209
459 2643959265
460 2644033278
461 2644093465
462 2644098199
463 2644119073
464 2644231040
465 2644323075
466 2644457801
467 2644536710
468 2738870023
469 2740166377
470 2774394039
471 2809195089
472 2812334429
473 2812349974
474 2855389384
475 2857483959
476 2891972410
477 2984579298
478 2990259810

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02601

Exonuc_VII_L

Exonuclease VII, large subunit

142

364

0.97

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

43

121

0.96

PF02601

Exonuc_VII_L

Exonuclease VII, large subunit

340

412

0.94

PF13742

tRNA_anti_2

OB-fold nucleic acid binding domain

24

119

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1z9f-assembly1.cif.gz_A crystal structure of single stranded dna-binding protein (tm0604) from thermotoga maritima at 2.60 a resolution 0.8329 29 109
3u58-assembly4.cif.gz_D crystal structure of the tetrahymena telomerase processivity factor teb1 ab 0.8244 29 108
4gn3-assembly8.cif.gz_P obody am1l10 bound to hen egg-white lysozyme 0.8067 28 109
3u4z-assembly1.cif.gz_A crystal structure of the tetrahymena telomerase processivity factor teb1 ob-b 0.8049 29 108
4glv-assembly3.cif.gz_F obody am3l09 bound to hen egg-white lysozyme 0.8041 29 109
ID Description Score Start End Superfamily
af_P9WF31_10_105_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.981 11 106 2.40.50.140
af_P9WF31_10_105_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.971 11 106 2.40.50.140
af_P9WF31_128_342_3.40.50.261 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Succinyl-CoA synthetase domains 0.91 130 336 3.40.50.261
af_P04994_10_103_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8699 11 106 2.40.50.140
af_P04994_10_103_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8616 11 106 2.40.50.140
ID Description Score Start End GO Terms
AF-T1AAC6-F1-model_v4 Exonuclease VII, large subunit (EC 3.1.11.6) 0.9804 117 281 GO:0006308
GO:0008855
GO:0009318
AF-Q71IW7-F1-model_v4 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.9772 127 269 GO:0006308
GO:0008855
GO:0009318
AF-T1AAC6-F1-model_v4 Exonuclease VII, large subunit (EC 3.1.11.6) 0.9463 117 281 GO:0006308
GO:0008855
GO:0009318
AF-X1ELQ5-F1-model_v4 Exonuclease VII large subunit C-terminal domain-containing protein 0.9355 138 302 GO:0006308
GO:0008855
GO:0009318
AF-A0A5Q0UKQ2-F1-model_v4 Exonuclease VII large subunit (EC 3.1.11.6) 0.9345 164 256 GO:0006308
GO:0008855
GO:0009318

Map