F352221

General Info

Members Datasets Scaffolds Average Seq Length
239 176 478 235

Family's Representative Sequence

Representative Sequence 3300046515|Ga0495620_0033783|Ga0495620_0033783_253_1053
Length 266
Sequence VAKSAGSVEQAAGVRAHRGNAFCIRKVRSTMTQRLLVTGGASGIGREIARHGVEQGWDVIVLDRAVGTIGRSVIADLSDTDSTAAALAEALEDGPITRLVNNVGAVFPASLDELTLDQLTRSFEVNLRSAIQSSQALLPGMSEAGFGRIVNMSSRAALGKELRTSYAAAKAGLIGVTRVWALELGGRGITVNAIGPGPIATDLFMAANPADSPRTRAIVESVPVGRLGTPEDVAHAAGFFLDDRAGFVTGQTLYVCGGLTVGVNSI

Samples

Sample ID Description Type Environment
1 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
2 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
3 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
4 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
5 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
6 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
7 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
8 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
9 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
10 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
11 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
12 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
13 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
14 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
15 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
16 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
17 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
18 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
19 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
20 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
21 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
22 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
23 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
24 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
25 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
26 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
27 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
28 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
29 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
30 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
33 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
34 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
35 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
36 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
37 3300044671 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA1E Metagenome Unclassified
38 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
39 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
40 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
41 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
42 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
43 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
44 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
45 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
46 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
47 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
48 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
49 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
53 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
54 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
55 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
56 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
57 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
58 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
59 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
60 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
61 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
62 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
67 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
68 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
69 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
70 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
71 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
72 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
75 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
76 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
77 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
78 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
87 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
91 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
99 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
100 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
101 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
104 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
105 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
130 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
131 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
132 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
136 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
137 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
140 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
141 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
142 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
152 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
153 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
154 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
155 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
156 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
157 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
158 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
159 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
160 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
161 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
162 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
163 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
164 2739367898 Nocardioides sp. CF479 Isolate Unclassified
165 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
166 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
167 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
168 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
169 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
170 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
171 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
172 2885266251 Ralstonia sp. SET104 Isolate Nodule
173 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
174 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
175 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
176 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.12
Metatranscriptomes 0
Isolates 10.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.64
Nodule 2.93
Rhizoplane 2.51
Rhizosphere 63.18
Stem 0
Stem Tuber 0
Unclassified 2.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495620_0033783 3300046515 Bacteria 2318
2 Ga0075365_10003774 3300006038 Bacteria 7889
3 Ga0075365_10013526 3300006038 Bacteria 4885
4 Ga0075365_10022559 3300006038 Bacteria 3946
5 Ga0075365_10582601 3300006038 Bacteria 791
6 Ga0075364_10026798 3300006051 Bacteria 3679
7 Ga0075364_10032174 3300006051 Bacteria 3370
8 Ga0075364_10477471 3300006051 Bacteria 852
9 Ga0075432_10002813 3300006058 Bacteria 5843
10 Ga0075369_10025482 3300006186 Bacteria 2459
11 Ga0075370_10018655 3300006353 Bacteria 3765
12 Ga0075370_10023920 3300006353 Bacteria 3369
13 Ga0075431_100381890 3300006847 Unclassified 1412
14 Ga0114129_10866945 3300009147 Unclassified 1147
15 Ga0213872_10126216 3300021361 Bacteria 1129
16 Ga0307515_10002359 3300028794 Bacteria 41195
17 Ga0307515_10050864 3300028794 Bacteria 6194
18 Ga0265338_10019962 3300028800 Bacteria 7075
19 Ga0307512_10006402 3300030522 Bacteria 11929
20 Ga0307512_10006723 3300030522 Bacteria 11569
21 Ga0307513_10019980 3300031456 Bacteria 7953
22 Ga0307513_10417120 3300031456 Bacteria 1073
23 Ga0307509_10005713 3300031507 Bacteria 17145
24 Ga0307408_100013978 3300031548 Bacteria 5332
25 Ga0307508_10019113 3300031616 Bacteria 6227
26 Ga0307508_10286459 3300031616 Bacteria 1240
27 Ga0307514_10001238 3300031649 Bacteria 33583
28 Ga0316579_10011725 3300031691 Bacteria 3733
29 Ga0307516_10006123 3300031730 Bacteria 14180
30 Ga0307405_10082991 3300031731 Bacteria 2099
31 Ga0307410_10002340 3300031852 Bacteria 9126
32 Ga0307410_10082871 3300031852 Bacteria 2257
33 Ga0307406_10546345 3300031901 Bacteria 947
34 Ga0307407_10290890 3300031903 Bacteria 1135
35 Ga0307412_10300559 3300031911 Bacteria 1268
36 Ga0307409_100008722 3300031995 Bacteria 6179
37 Ga0307416_100024185 3300032002 Bacteria 4428
38 Ga0307416_100035535 3300032002 Bacteria 3807
39 Ga0307507_10000498 3300033179 Bacteria 82993
40 Ga0307507_10023722 3300033179 Bacteria 6719
41 Ga0307510_10294769 3300033180 Bacteria 1086
42 Ga0316582_0153496 3300036647 Bacteria 1557
43 Ga0316584_0022151 3300036712 Unclassified 4631
44 Ga0316584_0264047 3300036712 Bacteria 1255
45 Ga0395898_0324009 3300037466 Bacteria 1470
46 Ga0316581_0095813 3300037588 Bacteria 914
47 Ga0436360_0014719 3300039438 Bacteria 1028
48 Ga0436361_1048149 3300039447 Bacteria 1334
49 Ga0436363_0743097 3300039450 Bacteria 7153
50 Ga0436363_1486325 3300039450 Bacteria 1332
51 Ga0439447_023696 3300041407 Bacteria 1596
52 Ga0466978_0094650 3300044671 Bacteria 1859
53 Ga0466982_0143769 3300044672 Bacteria 1462
54 Ga0466965_0006525 3300044683 Bacteria 5307
55 Ga0466961_0000339 3300044693 Bacteria 30569
56 Ga0466963_0024097 3300044694 Bacteria 3872
57 Ga0466964_0008586 3300044706 Bacteria 3839
58 Ga0466971_0014518 3300044719 Bacteria 3466
59 Ga0466970_0000987 3300044765 Bacteria 13685
60 Ga0466957_0075370 3300044842 Bacteria 2093
61 Ga0466960_0095644 3300044901 Bacteria 1521
62 Ga0466959_0007743 3300045049 Bacteria 7551
63 Ga0466967_0000434 3300045976 Bacteria 19950
64 Ga0466967_0026601 3300045976 Bacteria 4794
65 Ga0495627_000385 3300046453 Bacteria 40228
66 Ga0495592_0012400 3300046454 Bacteria 6473
67 Ga0495603_0129107 3300046455 Bacteria 1472
68 Ga0495591_000713 3300046458 Bacteria 24121
69 Ga0495629_0001095 3300046459 Bacteria 21490
70 Ga0495629_0044419 3300046459 Bacteria 3118
71 Ga0495638_0001977 3300046460 Bacteria 17520
72 Ga0495638_0174501 3300046460 Bacteria 1231
73 Ga0495653_0018486 3300046463 Bacteria 5659
74 Ga0495653_0079392 3300046463 Bacteria 2430
75 Ga0495653_0187359 3300046463 Bacteria 1414
76 Ga0495580_0295389 3300046472 Bacteria 1104
77 Ga0495582_0013110 3300046473 Bacteria 4564
78 Ga0495605_0000001 3300046474 Bacteria 614538
79 Ga0495605_0001565 3300046474 Bacteria 14872
80 Ga0495664_0006932 3300046477 Bacteria 6272
81 Ga0495596_0002750 3300046500 Bacteria 9226
82 Ga0495596_0144115 3300046500 Bacteria 925
83 Ga0495607_0039425 3300046501 Unclassified 2821
84 Ga0495607_0063395 3300046501 Bacteria 2091
85 Ga0495583_0006299 3300046506 Bacteria 7796
86 Ga0495606_0073049 3300046507 Bacteria 2153
87 Ga0495606_0103969 3300046507 Bacteria 1724
88 Ga0495608_0001033 3300046511 Bacteria 19551
89 Ga0495618_0004886 3300046514 Bacteria 8190
90 Ga0495620_0024628 3300046515 Bacteria 2859
91 Ga0495631_0000333 3300046518 Bacteria 32414
92 Ga0495632_0006039 3300046519 Bacteria 7865
93 Ga0495637_0017648 3300046520 Bacteria 3321
94 Ga0495648_0001445 3300046524 Bacteria 23245
95 Ga0495666_0014127 3300046526 Bacteria 3980
96 Ga0495654_0000351 3300046530 Bacteria 39795
97 Ga0495665_0019864 3300046531 Bacteria 3612
98 Ga0495665_0095420 3300046531 Bacteria 1562
99 Ga0495640_0009814 3300046533 Bacteria 7431
100 Ga0495586_0032162 3300046535 Bacteria 2813
101 Ga0495586_0089453 3300046535 Bacteria 1699
102 Ga0495597_0103146 3300046542 Bacteria 1201
103 Ga0495622_0000079 3300046557 Bacteria 86143
104 Ga0495656_0238934 3300046615 Bacteria 914
105 Ga0495668_0034951 3300046616 Bacteria 2817
106 Ga0495668_0038706 3300046616 Bacteria 2664
107 Ga0495668_0041364 3300046616 Bacteria 2567
108 Ga0495634_0006799 3300046642 Bacteria 8658
109 Ga0495611_0095063 3300046648 Bacteria 1379
110 Ga0495625_0002380 3300046660 Bacteria 20470
111 Ga0495635_0003121 3300046663 Bacteria 11396
112 Ga0495661_0042532 3300046665 Bacteria 2800
113 Ga0495588_0001044 3300046674 Bacteria 12020
114 Ga0495657_0285079 3300046675 Bacteria 987
115 Ga0495623_0008766 3300046679 Bacteria 6566
116 Ga0495646_0034073 3300046680 Bacteria 3163
117 Ga0495613_0208616 3300046689 Bacteria 1374
118 Ga0495670_0040442 3300046691 Bacteria 2325
119 Ga0495671_0003979 3300046692 Bacteria 8937
120 Ga0495671_0006313 3300046692 Bacteria 6862
121 Ga0495671_0030140 3300046692 Bacteria 2781
122 Ga0495671_0127813 3300046692 Bacteria 1239
123 Ga0495671_0215503 3300046692 Bacteria 930
124 Ga0495649_0031103 3300046694 Bacteria 2945
125 Ga0495649_0132629 3300046694 Bacteria 1314
126 Ga0495589_0018628 3300046794 Bacteria 3559
127 Ga0495600_0107705 3300046809 Bacteria 1815
128 Ga0495600_0337451 3300046809 Bacteria 945
129 Ga0495581_0068942 3300047315 Bacteria 2045
130 Ga0495581_0080755 3300047315 Bacteria 1882
131 Ga0495604_0029237 3300047317 Bacteria 4383
132 Ga0495674_0001872 3300047319 Bacteria 20718
133 Ga0495674_0051227 3300047319 Bacteria 3640
134 Ga0495672_0000942 3300047320 Bacteria 30337
135 Ga0495672_0001553 3300047320 Bacteria 22467
136 Ga0495672_0001727 3300047320 Bacteria 21130
137 Ga0495672_0015497 3300047320 Bacteria 5173
138 Ga0495672_0052295 3300047320 Bacteria 2400
139 Ga0495672_0139900 3300047320 Bacteria 1265
140 Ga0495672_0173316 3300047320 Bacteria 1098
141 Ga0495676_0022164 3300047321 Bacteria 5533
142 Ga0495676_0067010 3300047321 Bacteria 2779
143 Ga0495680_0045417 3300047322 Bacteria 3468
144 Ga0495683_0191037 3300047323 Bacteria 929
145 Ga0495687_006629 3300047443 Bacteria 7041
146 Ga0495675_0020974 3300047444 Bacteria 4159
147 Ga0495679_004699 3300047446 Bacteria 6210
148 Ga0495673_0000583 3300047469 Bacteria 36759
149 Ga0495673_0000904 3300047469 Bacteria 27167
150 Ga0495673_0004366 3300047469 Bacteria 8874
151 Ga0495681_0011160 3300047470 Bacteria 5377
152 Ga0495684_0357038 3300047471 Bacteria 1036
153 Ga0495686_0036106 3300047472 Bacteria 3172
154 Ga0495593_0009157 3300047673 Bacteria 5740
155 Ga0495602_0167509 3300048088 Bacteria 1708
156 Ga0495614_0006971 3300048089 Bacteria 5047
157 Ga0495614_0010140 3300048089 Bacteria 4158
158 Ga0496102_0015989 3300048905 Bacteria 6550
159 Ga0496102_0044756 3300048905 Bacteria 4018
160 Ga0496103_0009942 3300048906 Bacteria 5625
161 Ga0496104_0260321 3300048907 Bacteria 1648
162 Ga0496111_0426641 3300048914 Bacteria 979
163 Ga0496114_0764576 3300048917 Bacteria 844
164 Ga0496117_0003148 3300048920 Bacteria 19681
165 Ga0496117_0005869 3300048920 Bacteria 12692
166 Ga0496118_0000198 3300048921 Bacteria 105857
167 Ga0496118_0003397 3300048921 Bacteria 20114
168 Ga0496124_0022521 3300048927 Bacteria 5772
169 Ga0496125_0146492 3300048928 Bacteria 1631
170 Ga0496126_0000277 3300048929 Bacteria 108040
171 Ga0496126_0093484 3300048929 Bacteria 2640
172 Ga0496126_0206071 3300048929 Bacteria 1658
173 Ga0496126_0340489 3300048929 Unclassified 1229
174 Ga0495682_0026643 3300049460 Bacteria 2145
175 Ga0501034_0021874 3300049571 Bacteria 6515
176 Ga0501037_0024462 3300049573 Bacteria 4467
177 Ga0501043_0109571 3300049579 Bacteria 2168
178 Ga0501043_0377911 3300049579 Bacteria 1073
179 Ga0501047_0050086 3300049581 Bacteria 4033
180 Ga0501047_0660981 3300049581 Bacteria 864
181 Ga0501070_0000654 3300049586 Bacteria 31914
182 Ga0501070_0155558 3300049586 Bacteria 1885
183 Ga0501080_0000189 3300049742 Bacteria 44995
184 Ga0501044_0375635 3300049823 Bacteria 1337
185 nmdc:mga00v17_117316_c1 3300050491 Bacteria 1693
186 nmdc:mga00v17_436021_c1 3300050491 Bacteria 851
187 nmdc:mga00v17_85307_c1 3300050491 Bacteria 1977
188 nmdc:mga0yw44_103309_c1 3300050492 Bacteria 1818
189 nmdc:mga0yw44_3135_c1 3300050492 Bacteria 7258
190 nmdc:mga0yw44_5813_c1 3300050492 Bacteria 5884
191 nmdc:mga06z11_53289_c1 3300050494 Bacteria 2080
192 nmdc:mga07m45_170979_c1 3300050496 Bacteria 1263
193 nmdc:mga05p37_912032_c1 3300050507 Bacteria 946
194 nmdc:mga06r32_207596_c1 3300050510 Bacteria 1947
195 nmdc:mga0sz30_40439_c1 3300050516 Bacteria 1960
196 Ga0500610_0148861 3300053079 Bacteria 1175
197 Ga0500643_001869 3300053087 Bacteria 11466
198 Ga0500641_0032947 3300053096 Bacteria 2053
199 Ga0500556_0000663 3300053104 Bacteria 21435
200 Ga0500560_009758 3300053107 Bacteria 2373
201 Ga0500562_005126 3300053108 Bacteria 3292
202 Ga0500595_006650 3300053119 Bacteria 4877
203 Ga0500559_0035849 3300053136 Bacteria 2144
204 Ga0500568_0081161 3300053139 Bacteria 1231
205 Ga0500573_0139573 3300053140 Bacteria 1336
206 Ga0500573_0150518 3300053140 Unclassified 1275
207 Ga0500577_0012409 3300053142 Bacteria 2576
208 Ga0500577_0090010 3300053142 Bacteria 1238
209 Ga0500616_0000106 3300053153 Bacteria 153706
210 Ga0500616_0008442 3300053153 Bacteria 6397
211 Ga0500627_0004708 3300053158 Bacteria 4423
212 Ga0501084_0155974 3300054114 Bacteria 1925
213 Ga0501082_0610133 3300060353 Bacteria 955
214 2501072356 2501025501 Bacteria 7768574
215 2501079998 2501025502 Bacteria 9641094
216 2501412366 2501025504 Bacteria 8008976
217 2511087884 2510917013 Bacteria 9951648
218 2511101498 2510917014 Bacteria 8296963
219 2511107899 2510917015 Bacteria 7950052
220 2513553012 2513237082 Bacteria 8640282
221 2513559872 2513237083 Bacteria 8410967
222 2516018181 2515154189 Bacteria 9629850
223 2585309816 2582581313 Bacteria 10042643
224 2588107097 2585428157 Bacteria 3018951
225 2738708421 2738541274 Bacteria 6909446
226 2739332104 2738543028 Bacteria 6917070
227 2740167093 2739367898 Bacteria 4367674
228 2842325923 2842324504 Bacteria 9364110
229 2842350201 2842348783 Bacteria 9002918
230 2842454576 2842454564 Bacteria 8730687
231 2856289861 2856287931 Bacteria 7223934
232 2857363100 2857357740 Bacteria 9937880
233 2857576189 2857576091 Bacteria 5465855
234 2883090410 2883087390 Bacteria 9532701
235 2885270229 2885266251 Bacteria 4796748
236 2900581029 2900577576 Bacteria 5438534
237 2902794220 2902792274 Bacteria 7270173
238 8003956281 8003955200 Bacteria 8601927
239 8039100146 8039098773 Bacteria 6602928
240 Ga0495620_0033783
241 Ga0075365_10003774
242 Ga0075365_10013526
243 Ga0075365_10022559
244 Ga0075365_10582601
245 Ga0075364_10026798
246 Ga0075364_10032174
247 Ga0075364_10477471
248 Ga0075432_10002813
249 Ga0075369_10025482
250 Ga0075370_10018655
251 Ga0075370_10023920
252 Ga0075431_100381890
253 Ga0114129_10866945
254 Ga0213872_10126216
255 Ga0307515_10002359
256 Ga0307515_10050864
257 Ga0265338_10019962
258 Ga0307512_10006402
259 Ga0307512_10006723
260 Ga0307513_10019980
261 Ga0307513_10417120
262 Ga0307509_10005713
263 Ga0307408_100013978
264 Ga0307508_10019113
265 Ga0307508_10286459
266 Ga0307514_10001238
267 Ga0316579_10011725
268 Ga0307516_10006123
269 Ga0307405_10082991
270 Ga0307410_10002340
271 Ga0307410_10082871
272 Ga0307406_10546345
273 Ga0307407_10290890
274 Ga0307412_10300559
275 Ga0307409_100008722
276 Ga0307416_100024185
277 Ga0307416_100035535
278 Ga0307507_10000498
279 Ga0307507_10023722
280 Ga0307510_10294769
281 Ga0316582_0153496
282 Ga0316584_0022151
283 Ga0316584_0264047
284 Ga0395898_0324009
285 Ga0316581_0095813
286 Ga0436360_0014719
287 Ga0436361_1048149
288 Ga0436363_0743097
289 Ga0436363_1486325
290 Ga0439447_023696
291 Ga0466978_0094650
292 Ga0466982_0143769
293 Ga0466965_0006525
294 Ga0466961_0000339
295 Ga0466963_0024097
296 Ga0466964_0008586
297 Ga0466971_0014518
298 Ga0466970_0000987
299 Ga0466957_0075370
300 Ga0466960_0095644
301 Ga0466959_0007743
302 Ga0466967_0000434
303 Ga0466967_0026601
304 Ga0495627_000385
305 Ga0495592_0012400
306 Ga0495603_0129107
307 Ga0495591_000713
308 Ga0495629_0001095
309 Ga0495629_0044419
310 Ga0495638_0001977
311 Ga0495638_0174501
312 Ga0495653_0018486
313 Ga0495653_0079392
314 Ga0495653_0187359
315 Ga0495580_0295389
316 Ga0495582_0013110
317 Ga0495605_0000001
318 Ga0495605_0001565
319 Ga0495664_0006932
320 Ga0495596_0002750
321 Ga0495596_0144115
322 Ga0495607_0039425
323 Ga0495607_0063395
324 Ga0495583_0006299
325 Ga0495606_0073049
326 Ga0495606_0103969
327 Ga0495608_0001033
328 Ga0495618_0004886
329 Ga0495620_0024628
330 Ga0495631_0000333
331 Ga0495632_0006039
332 Ga0495637_0017648
333 Ga0495648_0001445
334 Ga0495666_0014127
335 Ga0495654_0000351
336 Ga0495665_0019864
337 Ga0495665_0095420
338 Ga0495640_0009814
339 Ga0495586_0032162
340 Ga0495586_0089453
341 Ga0495597_0103146
342 Ga0495622_0000079
343 Ga0495656_0238934
344 Ga0495668_0034951
345 Ga0495668_0038706
346 Ga0495668_0041364
347 Ga0495634_0006799
348 Ga0495611_0095063
349 Ga0495625_0002380
350 Ga0495635_0003121
351 Ga0495661_0042532
352 Ga0495588_0001044
353 Ga0495657_0285079
354 Ga0495623_0008766
355 Ga0495646_0034073
356 Ga0495613_0208616
357 Ga0495670_0040442
358 Ga0495671_0003979
359 Ga0495671_0006313
360 Ga0495671_0030140
361 Ga0495671_0127813
362 Ga0495671_0215503
363 Ga0495649_0031103
364 Ga0495649_0132629
365 Ga0495589_0018628
366 Ga0495600_0107705
367 Ga0495600_0337451
368 Ga0495581_0068942
369 Ga0495581_0080755
370 Ga0495604_0029237
371 Ga0495674_0001872
372 Ga0495674_0051227
373 Ga0495672_0000942
374 Ga0495672_0001553
375 Ga0495672_0001727
376 Ga0495672_0015497
377 Ga0495672_0052295
378 Ga0495672_0139900
379 Ga0495672_0173316
380 Ga0495676_0022164
381 Ga0495676_0067010
382 Ga0495680_0045417
383 Ga0495683_0191037
384 Ga0495687_006629
385 Ga0495675_0020974
386 Ga0495679_004699
387 Ga0495673_0000583
388 Ga0495673_0000904
389 Ga0495673_0004366
390 Ga0495681_0011160
391 Ga0495684_0357038
392 Ga0495686_0036106
393 Ga0495593_0009157
394 Ga0495602_0167509
395 Ga0495614_0006971
396 Ga0495614_0010140
397 Ga0496102_0015989
398 Ga0496102_0044756
399 Ga0496103_0009942
400 Ga0496104_0260321
401 Ga0496111_0426641
402 Ga0496114_0764576
403 Ga0496117_0003148
404 Ga0496117_0005869
405 Ga0496118_0000198
406 Ga0496118_0003397
407 Ga0496124_0022521
408 Ga0496125_0146492
409 Ga0496126_0000277
410 Ga0496126_0093484
411 Ga0496126_0206071
412 Ga0496126_0340489
413 Ga0495682_0026643
414 Ga0501034_0021874
415 Ga0501037_0024462
416 Ga0501043_0109571
417 Ga0501043_0377911
418 Ga0501047_0050086
419 Ga0501047_0660981
420 Ga0501070_0000654
421 Ga0501070_0155558
422 Ga0501080_0000189
423 Ga0501044_0375635
424 nmdc:mga00v17_117316_c1
425 nmdc:mga00v17_436021_c1
426 nmdc:mga00v17_85307_c1
427 nmdc:mga0yw44_103309_c1
428 nmdc:mga0yw44_3135_c1
429 nmdc:mga0yw44_5813_c1
430 nmdc:mga06z11_53289_c1
431 nmdc:mga07m45_170979_c1
432 nmdc:mga05p37_912032_c1
433 nmdc:mga06r32_207596_c1
434 nmdc:mga0sz30_40439_c1
435 Ga0500610_0148861
436 Ga0500643_001869
437 Ga0500641_0032947
438 Ga0500556_0000663
439 Ga0500560_009758
440 Ga0500562_005126
441 Ga0500595_006650
442 Ga0500559_0035849
443 Ga0500568_0081161
444 Ga0500573_0139573
445 Ga0500573_0150518
446 Ga0500577_0012409
447 Ga0500577_0090010
448 Ga0500616_0000106
449 Ga0500616_0008442
450 Ga0500627_0004708
451 Ga0501084_0155974
452 Ga0501082_0610133
453 2501072356
454 2501079998
455 2501412366
456 2511087884
457 2511101498
458 2511107899
459 2513553012
460 2513559872
461 2516018181
462 2585309816
463 2588107097
464 2738708421
465 2739332104
466 2740167093
467 2842325923
468 2842350201
469 2842454576
470 2856289861
471 2857363100
472 2857576189
473 2883090410
474 2885270229
475 2900581029
476 2902794220
477 8003956281
478 8039100146

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

33

212

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

39

260

0.92

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

35

197

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d1y-assembly1.cif.gz_C crystal structure of tt0321 from thermus thermophilus hb8 0.9317 3 232
3csd-assembly1.cif.gz_B actinorhodin polyketide ketoreductase mutant p94l bound to nadph and the inhibitor emodin 0.9307 2 229
2d1y-assembly1.cif.gz_D crystal structure of tt0321 from thermus thermophilus hb8 0.9273 3 232
2d1y-assembly1.cif.gz_B crystal structure of tt0321 from thermus thermophilus hb8 0.9268 3 232
4jp2-assembly1.cif.gz_A crystal structure of tt0495 protein from thermus thermophilus hb8 0.9262 1 232
ID Description Score Start End Superfamily
af_I1LJY0_35_302_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9382 3 231 3.40.50.720
2d1yC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9317 3 232 3.40.50.720
1x1eA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9257 1 232 3.40.50.720
4rziB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9244 3 229 3.40.50.720
af_Q2QLP7_18_222_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9221 5 166 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A254QIU5-F1-model_v4 Short-chain dehydrogenase 0.9635 1 232 GO:0016616
GO:0030497
AF-A0A074U790-F1-model_v4 Short-chain dehydrogenase 0.9629 1 232
AF-A0A4Q8CAL0-F1-model_v4 deleted 0.9619 6 236
AF-A9EEW5-F1-model_v4 deleted 0.9616 2 232
AF-A0A809WJ76-F1-model_v4 deleted 0.9616 43 230

Map