F352093

General Info

Members Datasets Scaffolds Average Seq Length
239 173 214 510

Family's Representative Sequence

Representative Sequence 3300033179|Ga0307507_10056585|Ga0307507_100565853
Length 556
Sequence MHACLALIAEEILLRLYRSYPAMKPRQAQEMDLHSNILNITIMITRDGACTSLWQDTSTAYKPRNAINSGKQYDVIIAGGGITGISTGLLLQKAGLQCAVLEANSICFGTTGGTTAHLNTIMDTPYPTIIRNFGKENAALVARAAREAINLIKSNIAYYDIDCDFKEAEAGMFSQNKNQTKELEEIHQACTELGVETHYIDIIPAPFSFEKALCIDRQAKFHPVRYVMALADAFERAGGVIVEHCRVKAAENNEPLTIETSCGEFRTGYLIYATHIPPGVSLLNLRCAPYRTYAMAVTLADHNYPAGLIYDMCDPYHYYRSQEIDGQKYLLAGGEDHKTAHEENTLSCFLRLENHLRSNFAIKEVAYRWSSQYFEPVDGLPYIGHMPGQPGKILVATGFGGNGMIYSNVAAGILTDIVLQKENPYTLLFDPNRVKPVAGFSNFVKENTDVLRQFIGRLASHEELTAFAGIAPGEGRLVKFEGHFIGLSKDEQGNLHAVYPACTHMKCHVAWNNAEKSWDCPCHGARYDADGRVLTGPADMDLEEYNYKQSTSPATG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
3 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
4 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
5 2738541278 Niastella sp. CF465 Isolate Unclassified
6 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
7 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
8 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
9 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
10 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
11 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
12 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
13 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
14 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
15 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
16 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
17 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
18 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
19 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
20 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
21 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
22 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
23 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
24 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
25 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
26 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
27 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
28 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
32 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
33 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
34 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
35 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
36 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
37 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
38 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
39 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
40 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
41 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
42 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
43 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
46 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
47 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
48 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
58 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
59 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
60 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
61 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
62 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
63 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
88 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
89 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
120 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
124 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
129 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
133 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
134 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
135 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
136 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
137 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
138 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
142 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
143 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
144 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
162 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
163 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
164 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
165 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
166 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
167 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
168 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
169 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
173 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.12
Metatranscriptomes 0
Isolates 10.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.18
Nodule 0.42
Rhizoplane 0.42
Rhizosphere 72.8
Stem 0
Stem Tuber 0
Unclassified 22.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1961597 2162886007 Bacteria 3588
2 rootH1_10000020 3300003316 Bacteria 8212
3 rootH1_10009461 3300003316 Bacteria 6736
4 rootH1_10009461 3300003323 Bacteria 16505
5 rootH2_10010721 3300003320 Bacteria 15223
6 rootH2_10027537 3300003320 Bacteria 29475
7 rootH2_10052201 3300003320 Bacteria 2511
8 rootH2_10111294 3300003320 Unclassified 4133
9 rootH2_10126927 3300003320 Unclassified 3849
10 rootL2_10002427 3300003322 Bacteria 15148
11 rootL2_10120833 3300003322 Bacteria 11607
12 rootL2_10121531 3300003322 Bacteria 3521
13 rootL2_10134453 3300003322 Bacteria 5866
14 rootH1_10006403 3300003323 Bacteria 91171
15 rootH1_10010281 3300003323 Bacteria 22319
16 rootH1_10014831 3300003323 Bacteria 15556
17 rootH1_10131073 3300003323 Bacteria 1964
18 rootH1_10221858 3300003323 Bacteria 5587
19 Ga0055534_1008948 3300003784 Bacteria 2219
20 Ga0065165_1000724 3300005262 Bacteria 46099
21 Ga0065704_10071604 3300005289 Bacteria 10534
22 Ga0065712_10001358 3300005290 Bacteria 6597
23 Ga0065715_10120619 3300005293 Bacteria 2253
24 Ga0070670_100039269 3300005331 Bacteria 4071
25 Ga0070670_100189289 3300005331 Unclassified 1787
26 Ga0070666_10023569 3300005335 Bacteria 4007
27 Ga0070682_100000261 3300005337 Bacteria 37950
28 Ga0070689_100025189 3300005340 Bacteria 4468
29 Ga0070689_100040070 3300005340 Bacteria 3589
30 Ga0070675_100017500 3300005354 Bacteria 5695
31 Ga0070675_100057471 3300005354 Bacteria 3207
32 Ga0070673_100063055 3300005364 Bacteria 2947
33 Ga0070673_100193762 3300005364 Bacteria 1747
34 Ga0070688_100016878 3300005365 Bacteria 4181
35 Ga0070659_100007289 3300005366 Bacteria 8028
36 Ga0070667_100211242 3300005367 Bacteria 1725
37 Ga0070678_100004671 3300005456 Bacteria 7795
38 Ga0070681_10154385 3300005458 Unclassified 2221
39 Ga0068867_100024815 3300005459 Bacteria 4298
40 Ga0070698_100155551 3300005471 Unclassified 2232
41 Ga0070684_100050099 3300005535 Bacteria 3627
42 Ga0070665_100000047 3300005548 Bacteria 269702
43 Ga0068855_100116678 3300005563 Bacteria 3059
44 Ga0070664_100015084 3300005564 Bacteria 6308
45 Ga0068857_100001156 3300005577 Bacteria 20612
46 Ga0068856_100010766 3300005614 Bacteria 8882
47 Ga0068856_100089720 3300005614 Bacteria 3057
48 Ga0068852_100000884 3300005616 Bacteria 19821
49 Ga0068852_100000921 3300005616 Bacteria 19474
50 Ga0068859_100013612 3300005617 Bacteria 8155
51 Ga0068859_100018870 3300005617 Bacteria 6930
52 Ga0068859_100025483 3300005617 Bacteria 5933
53 Ga0068851_10039852 3300005834 Bacteria 2360
54 Ga0068870_10019490 3300005840 Unclassified 3290
55 Ga0068863_100024598 3300005841 Bacteria 5742
56 Ga0068863_100051050 3300005841 Bacteria 3920
57 Ga0068860_100000003 3300005843 Bacteria 575741
58 Ga0068860_100002793 3300005843 Bacteria 18154
59 Ga0068860_100007404 3300005843 Bacteria 10981
60 Ga0068860_100095571 3300005843 Bacteria 2833
61 Ga0068862_100060735 3300005844 Bacteria 3248
62 Ga0075366_10024333 3300006195 Bacteria 3532
63 Ga0097621_100124596 3300006237 Unclassified 2188
64 Ga0075428_100032614 3300006844 Bacteria 5752
65 Ga0068865_100061743 3300006881 Bacteria 2628
66 Ga0097620_100013612 3300006931 Bacteria 8155
67 Ga0097620_100018870 3300006931 Bacteria 6930
68 Ga0097620_100025483 3300006931 Bacteria 5933
69 Ga0105244_10000058 3300009036 Bacteria 128877
70 Ga0105240_10000059 3300009093 Bacteria 219860
71 Ga0105240_10001852 3300009093 Bacteria 35386
72 Ga0105240_10007436 3300009093 Bacteria 15909
73 Ga0105240_10011681 3300009093 Bacteria 12202
74 Ga0111539_10070583 3300009094 Bacteria 4123
75 Ga0111539_10155441 3300009094 Unclassified 2676
76 Ga0105247_10016164 3300009101 Bacteria 4471
77 Ga0105241_10000964 3300009174 Bacteria 21775
78 Ga0105241_10180239 3300009174 Bacteria 1752
79 Ga0105242_10000305 3300009176 Bacteria 39232
80 Ga0105242_10030064 3300009176 Bacteria 4336
81 Ga0105242_10060281 3300009176 Unclassified 3117
82 Ga0105237_10000056 3300009545 Bacteria 151313
83 Ga0105237_10000323 3300009545 Bacteria 67328
84 Ga0105237_10003939 3300009545 Bacteria 17384
85 Ga0105237_10025002 3300009545 Bacteria 6110
86 Ga0105238_10000986 3300009551 Bacteria 29095
87 Ga0105249_10025535 3300009553 Bacteria 5320
88 Ga0105249_10218522 3300009553 Bacteria 1874
89 Ga0105239_10000237 3300010375 Bacteria 81666
90 Ga0105239_10005924 3300010375 Bacteria 14228
91 Ga0105246_10051058 3300011119 Bacteria 2838
92 Ga0105246_10141628 3300011119 Bacteria 1809
93 Ga0157373_10093294 3300013100 Bacteria 2120
94 Ga0157373_10094426 3300013100 Bacteria 2106
95 Ga0157370_10006228 3300013104 Bacteria 13216
96 Ga0163162_10087918 3300013306 Bacteria 3187
97 Ga0163162_10125640 3300013306 Unclassified 2671
98 Ga0157372_10018896 3300013307 Bacteria 7416
99 Ga0157372_10046592 3300013307 Bacteria 4814
100 Ga0157372_10185265 3300013307 Bacteria 2410
101 Ga0157375_10000460 3300013308 Bacteria 37011
102 Ga0157375_10086724 3300013308 Unclassified 3182
103 Ga0163163_10004484 3300014325 Bacteria 11913
104 Ga0157380_10004913 3300014326 Bacteria 9317
105 Ga0157380_10031851 3300014326 Bacteria 4050
106 Ga0182005_1000423 3300015265 Bacteria 22630
107 Ga0163161_10176485 3300017792 Bacteria 1636
108 Ga0213876_10002322 3300021384 Bacteria 11223
109 Ga0209646_1004361 3300025246 Bacteria 2586
110 Ga0209675_1000033 3300025291 Bacteria 271576
111 Ga0207426_1005082 3300025302 Bacteria 6146
112 Ga0209257_1000008 3300025304 Bacteria 1294570
113 Ga0207655_1001612 3300025728 Bacteria 20093
114 Ga0207710_10007521 3300025900 Bacteria 4613
115 Ga0207647_10000025 3300025904 Bacteria 112150
116 Ga0207647_10006757 3300025904 Bacteria 8326
117 Ga0207645_10004322 3300025907 Bacteria 10531
118 Ga0207695_10000039 3300025913 Bacteria 454801
119 Ga0207695_10000365 3300025913 Bacteria 103398
120 Ga0207671_10000729 3300025914 Bacteria 41678
121 Ga0207671_10002299 3300025914 Bacteria 20645
122 Ga0207671_10002444 3300025914 Bacteria 19877
123 Ga0207671_10075765 3300025914 Bacteria 2517
124 Ga0207681_10083329 3300025923 Bacteria 2263
125 Ga0207681_10085763 3300025923 Bacteria 2236
126 Ga0207694_10007544 3300025924 Bacteria 8244
127 Ga0207650_10006244 3300025925 Bacteria 8119
128 Ga0207650_10025871 3300025925 Bacteria 4183
129 Ga0207659_10009522 3300025926 Bacteria 6075
130 Ga0207659_10074818 3300025926 Bacteria 2483
131 Ga0207690_10003417 3300025932 Bacteria 9477
132 Ga0207686_10000237 3300025934 Bacteria 42142
133 Ga0207670_10013639 3300025936 Bacteria 4798
134 Ga0207704_10031630 3300025938 Bacteria 2984
135 Ga0207691_10050017 3300025940 Bacteria 3827
136 Ga0207689_10006519 3300025942 Bacteria 10300
137 Ga0207667_10000902 3300025949 Bacteria 37879
138 Ga0207658_10138677 3300025986 Bacteria 1965
139 Ga0207639_10093748 3300026041 Bacteria 2409
140 Ga0207702_10055787 3300026078 Bacteria 3352
141 Ga0207641_10001972 3300026088 Bacteria 19612
142 Ga0207648_10173853 3300026089 Bacteria 1904
143 Ga0207674_10001064 3300026116 Bacteria 35702
144 Ga0207674_10078867 3300026116 Bacteria 3298
145 Ga0207683_10004980 3300026121 Bacteria 11423
146 Ga0207698_10054887 3300026142 Bacteria 3067
147 Ga0268266_10000104 3300028379 Bacteria 178320
148 Ga0268264_10000028 3300028381 Bacteria 426662
149 Ga0268264_10003543 3300028381 Bacteria 13439
150 Ga0268264_10151649 3300028381 Bacteria 2078
151 Ga0307517_10016764 3300028786 Bacteria 9603
152 Ga0307515_10000016 3300028794 Bacteria 554870
153 Ga0307515_10000057 3300028794 Bacteria 261695
154 Ga0307515_10113872 3300028794 Bacteria 3131
155 Ga0307515_10207043 3300028794 Unclassified 1818
156 Ga0307408_100020699 3300031548 Bacteria 4444
157 Ga0307508_10002684 3300031616 Bacteria 18625
158 Ga0307405_10102554 3300031731 Bacteria 1922
159 Ga0307410_10013046 3300031852 Bacteria 4832
160 Ga0307412_10000744 3300031911 Bacteria 18862
161 Ga0307409_100015587 3300031995 Bacteria 4994
162 Ga0307414_10000009 3300032004 Bacteria 359782
163 Ga0307415_100032939 3300032126 Bacteria 3358
164 Ga0307507_10056585 3300033179 Unclassified 3704
165 Ga0395905_0000565 3300037471 Bacteria 50339
166 Ga0395905_0174694 3300037471 Bacteria 2017
167 Ga0436365_1583419 3300039437 Bacteria 23084
168 Ga0439465_0003859 3300041413 Bacteria 4890
169 Ga0439431_0010028 3300041997 Bacteria 2145
170 Ga0439433_0003953 3300041999 Bacteria 3190
171 Ga0439449_0008163 3300042007 Bacteria 3980
172 Ga0439457_001236 3300042014 Bacteria 7679
173 Ga0439462_0000175 3300042015 Bacteria 10827
174 Ga0466972_0016258 3300044658 Bacteria 3719
175 Ga0466970_0052837 3300044765 Bacteria 2169
176 Ga0466957_0021998 3300044842 Bacteria 3761
177 Ga0495627_000002 3300046453 Bacteria 903861
178 Ga0495606_0014520 3300046507 Bacteria 6137
179 Ga0495654_0000001 3300046530 Bacteria 1513197
180 Ga0495611_0000046 3300046648 Bacteria 88300
181 Ga0495625_0072891 3300046660 Bacteria 2408
182 Ga0495672_0002283 3300047320 Bacteria 17804
183 Ga0495687_000244 3300047443 Bacteria 74586
184 Ga0496102_0036882 3300048905 Bacteria 4407
185 Ga0496116_0000053 3300048919 Bacteria 291837
186 Ga0496117_0000089 3300048920 Bacteria 210551
187 Ga0496118_0002500 3300048921 Bacteria 24646
188 Ga0496119_0000038 3300048922 Bacteria 209546
189 Ga0496121_0000011 3300048924 Bacteria 792193
190 Ga0496121_0117199 3300048924 Bacteria 2018
191 Ga0496122_0000767 3300048925 Bacteria 62024
192 Ga0496122_0003884 3300048925 Bacteria 19157
193 Ga0496123_0000696 3300048926 Bacteria 55317
194 Ga0496123_0003618 3300048926 Bacteria 17121
195 Ga0496124_0018872 3300048927 Bacteria 6440
196 Ga0496125_0002450 3300048928 Bacteria 24106
197 Ga0496125_0022907 3300048928 Bacteria 5786
198 Ga0496126_0062537 3300048929 Bacteria 3340
199 Ga0501300_001783 3300049523 Bacteria 3219
200 Ga0501047_0004269 3300049581 Bacteria 13458
201 Ga0501202_003232 3300049652 Bacteria 2782
202 Ga0501223_008900 3300049663 Bacteria 2041
203 Ga0501224_003266 3300049664 Bacteria 2257
204 Ga0501236_000275 3300049670 Bacteria 5495
205 Ga0501225_0005743 3300049705 Bacteria 3632
206 Ga0501241_000019 3300049758 Bacteria 88612
207 Ga0501264_000337 3300049761 Bacteria 7325
208 Ga0501268_006886 3300049765 Bacteria 1682
209 Ga0501269_000076 3300049766 Bacteria 30441
210 Ga0501044_0190611 3300049823 Bacteria 2013
211 nmdc:mga0k408_23257_c1 3300050493 Bacteria 3494
212 Ga0500622_0000007 3300053156 Bacteria 425621
213 Ga0500622_0000013 3300053156 Bacteria 371650
214 Ga0500622_0000305 3300053156 Bacteria 50294

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2977243572 2977246158 412
2 3300005841 Ga0068863_100051050 Ga0068863_1000510505 426
3 3300026088 Ga0207641_10001972 Ga0207641_100019722 426
4 3300028794 Ga0307515_10000057 Ga0307515_1000005734 469
5 3300005617 Ga0068859_100025483 Ga0068859_1000254834 480
6 3300005840 Ga0068870_10019490 Ga0068870_100194904 480
7 3300006931 Ga0097620_100025483 Ga0097620_1000254834 480
8 3300031616 Ga0307508_10002684 Ga0307508_1000268415 480
9 3300009094 Ga0111539_10070583 Ga0111539_100705833 483
10 3300041997 Ga0439431_0010028 Ga0439431_0010028_455_1999 484
11 3300015265 Ga0182005_1000423 Ga0182005_10004235 485
12 3300053156 Ga0500622_0000305 Ga0500622_0000305_40917_42437 488
13 iso_pu_bacteria 2834641062 2834644305 492
14 iso_pu_bacteria 8003400568 8003404349 492
15 3300003322 rootL2_10121531 rootL2_101215312 493
16 3300009176 Ga0105242_10060281 Ga0105242_100602812 493
17 3300046453 Ga0495627_000002 Ga0495627_000002_497150_498676 494
18 3300005293 Ga0065715_10120619 Ga0065715_101206192 496
19 3300005364 Ga0070673_100063055 Ga0070673_1000630553 496
20 3300009553 Ga0105249_10218522 Ga0105249_102185221 496
21 3300025923 Ga0207681_10083329 Ga0207681_100833292 498
22 3300049663 Ga0501223_008900 Ga0501223_008900_240_1775 498
23 3300049765 Ga0501268_006886 Ga0501268_006886_67_1602 498
24 3300010375 Ga0105239_10000237 Ga0105239_1000023757 499
25 iso_pu_bacteria 2738541278 2738728342 499
26 iso_pu_bacteria 2946019816 2946020256 499
27 3300031852 Ga0307410_10013046 Ga0307410_100130462 500
28 3300031995 Ga0307409_100015587 Ga0307409_1000155875 500
29 iso_pu_bacteria 2929154850 2929155244 500
30 iso_pu_bacteria 2929177148 2929181721 500
31 iso_pu_bacteria 2929239360 2929244772 500
32 iso_pu_bacteria 2945977869 2945984119 500
33 iso_pu_bacteria 2946013367 2946016490 500
34 iso_pu_bacteria 2775506739 2775672876 501
35 iso_pu_bacteria 2919097161 2919099294 501
36 3300003323 rootH1_10006403 rootH1_100064036 502
37 3300005471 Ga0070698_100155551 Ga0070698_1001555511 502
38 3300006195 Ga0075366_10024333 Ga0075366_100243333 502
39 3300028786 Ga0307517_10016764 Ga0307517_100167641 502
40 3300028794 Ga0307515_10207043 Ga0307515_102070431 502
41 3300044765 Ga0466970_0052837 Ga0466970_0052837_104_1621 502
42 3300050493 nmdc:mga0k408_23257_c1 nmdc:mga0k408_23257_c1_745_2262 502
43 3300003320 rootH2_10010721 rootH2_100107217 503
44 3300003322 rootL2_10134453 rootL2_101344531 503
45 3300003323 rootH1_10014831 rootH1_100148314 503
46 3300028794 Ga0307515_10000016 Ga0307515_10000016356 503
47 3300031731 Ga0307405_10102554 Ga0307405_101025541 503
48 3300032126 Ga0307415_100032939 Ga0307415_1000329395 503
49 3300044842 Ga0466957_0021998 Ga0466957_0021998_1534_3072 503
50 3300049652 Ga0501202_003232 Ga0501202_003232_108_1631 503
51 3300049664 Ga0501224_003266 Ga0501224_003266_574_2097 503
52 3300053156 Ga0500622_0000007 Ga0500622_0000007_249009_250604 503
53 3300053156 Ga0500622_0000013 Ga0500622_0000013_98578_100116 503
54 iso_pu_bacteria 2582581278 2585141568 503
55 iso_pu_bacteria 2585428182 2588208171 503
56 iso_pu_bacteria 2585428184 2588219872 503
57 iso_pu_bacteria 2772190705 2772603858 503
58 iso_pu_bacteria 2816332188 2816872997 503
59 iso_pu_bacteria 2818991442 2819576547 503
60 iso_pu_bacteria 2821136567 2821143231 503
61 iso_pu_bacteria 2840677318 2840678368 503
62 iso_pu_bacteria 2871720351 2871723798 503
63 iso_pu_bacteria 2889290771 2889291629 503
64 iso_pu_bacteria 2896085136 2896086185 503
65 iso_pu_bacteria 2904467357 2904470125 503
66 iso_pu_bacteria 2993372514 2993373574 503
67 iso_pu_bacteria 2993480792 2993484251 503
68 3300003316 rootH1_10000020 rootH1_100000204 504
69 3300003320 rootH2_10027537 rootH2_100275377 504
70 3300003320 rootH2_10052201 rootH2_100522013 504
71 3300003322 rootL2_10120833 rootL2_101208333 504
72 3300003323 rootH1_10221858 rootH1_102218583 504
73 3300025246 Ga0209646_1004361 Ga0209646_10043612 504
74 3300025728 Ga0207655_1001612 Ga0207655_100161214 504
75 3300031548 Ga0307408_100020699 Ga0307408_1000206992 504
76 3300032004 Ga0307414_10000009 Ga0307414_10000009100 504
77 3300042007 Ga0439449_0008163 Ga0439449_0008163_2090_3613 504
78 3300042014 Ga0439457_001236 Ga0439457_001236_369_1892 504
79 3300042015 Ga0439462_0000175 Ga0439462_0000175_4632_6155 504
80 3300049523 Ga0501300_001783 Ga0501300_001783_24_1565 504
81 3300049670 Ga0501236_000275 Ga0501236_000275_366_1907 504
82 3300049761 Ga0501264_000337 Ga0501264_000337_3849_5444 504
83 3300003316 rootH1_10009461 rootH1_100094614 505
84 3300003320 rootH2_10111294 rootH2_101112944 505
85 3300003320 rootH2_10126927 rootH2_101269272 505
86 3300003323 rootH1_10131073 rootH1_101310732 505
87 3300005290 Ga0065712_10001358 Ga0065712_100013587 505
88 3300005340 Ga0070689_100025189 Ga0070689_1000251893 505
89 3300005340 Ga0070689_100040070 Ga0070689_1000400703 505
90 3300005354 Ga0070675_100017500 Ga0070675_1000175004 505
91 3300005354 Ga0070675_100057471 Ga0070675_1000574713 505
92 3300005365 Ga0070688_100016878 Ga0070688_1000168784 505
93 3300005367 Ga0070667_100211242 Ga0070667_1002112421 505
94 3300005458 Ga0070681_10154385 Ga0070681_101543852 505
95 3300005459 Ga0068867_100024815 Ga0068867_1000248155 505
96 3300005548 Ga0070665_100000047 Ga0070665_100000047170 505
97 3300005563 Ga0068855_100116678 Ga0068855_1001166782 505
98 3300005577 Ga0068857_100001156 Ga0068857_1000011569 505
99 3300005614 Ga0068856_100010766 Ga0068856_1000107668 505
100 3300005614 Ga0068856_100089720 Ga0068856_1000897203 505
101 3300005616 Ga0068852_100000884 Ga0068852_10000088412 505
102 3300005617 Ga0068859_100013612 Ga0068859_1000136124 505
103 3300005841 Ga0068863_100024598 Ga0068863_1000245984 505
104 3300005843 Ga0068860_100000003 Ga0068860_100000003423 505
105 3300005843 Ga0068860_100007404 Ga0068860_1000074046 505
106 3300005844 Ga0068862_100060735 Ga0068862_1000607354 505
107 3300006844 Ga0075428_100032614 Ga0075428_1000326145 505
108 3300006931 Ga0097620_100013612 Ga0097620_1000136127 505
109 3300009093 Ga0105240_10000059 Ga0105240_1000005981 505
110 3300009093 Ga0105240_10001852 Ga0105240_100018526 505
111 3300009093 Ga0105240_10007436 Ga0105240_100074369 505
112 3300009093 Ga0105240_10011681 Ga0105240_100116818 505
113 3300009174 Ga0105241_10000964 Ga0105241_100009645 505
114 3300009176 Ga0105242_10000305 Ga0105242_1000030524 505
115 3300009545 Ga0105237_10000056 Ga0105237_1000005675 505
116 3300009545 Ga0105237_10000323 Ga0105237_1000032324 505
117 3300009545 Ga0105237_10003939 Ga0105237_1000393910 505
118 3300009551 Ga0105238_10000986 Ga0105238_1000098618 505
119 3300009553 Ga0105249_10025535 Ga0105249_100255353 505
120 3300010375 Ga0105239_10005924 Ga0105239_100059248 505
121 3300013100 Ga0157373_10093294 Ga0157373_100932942 505
122 3300013100 Ga0157373_10094426 Ga0157373_100944261 505
123 3300013104 Ga0157370_10006228 Ga0157370_100062286 505
124 3300013306 Ga0163162_10087918 Ga0163162_100879183 505
125 3300013306 Ga0163162_10125640 Ga0163162_101256402 505
126 3300013307 Ga0157372_10018896 Ga0157372_100188961 505
127 3300013307 Ga0157372_10185265 Ga0157372_101852653 505
128 3300013308 Ga0157375_10086724 Ga0157375_100867242 505
129 3300014326 Ga0157380_10031851 Ga0157380_100318514 505
130 3300017792 Ga0163161_10176485 Ga0163161_101764851 505
131 3300021384 Ga0213876_10002322 Ga0213876_1000232210 505
132 3300025904 Ga0207647_10006757 Ga0207647_100067579 505
133 3300025913 Ga0207695_10000039 Ga0207695_10000039338 505
134 3300025913 Ga0207695_10000365 Ga0207695_1000036549 505
135 3300025914 Ga0207671_10000729 Ga0207671_1000072915 505
136 3300025914 Ga0207671_10002299 Ga0207671_1000229919 505
137 3300025914 Ga0207671_10002444 Ga0207671_100024447 505
138 3300025923 Ga0207681_10085763 Ga0207681_100857632 505
139 3300025924 Ga0207694_10007544 Ga0207694_100075447 505
140 3300025925 Ga0207650_10025871 Ga0207650_100258714 505
141 3300025926 Ga0207659_10009522 Ga0207659_100095224 505
142 3300025934 Ga0207686_10000237 Ga0207686_1000023716 505
143 3300025936 Ga0207670_10013639 Ga0207670_100136393 505
144 3300025940 Ga0207691_10050017 Ga0207691_100500173 505
145 3300025949 Ga0207667_10000902 Ga0207667_100009026 505
146 3300025986 Ga0207658_10138677 Ga0207658_101386772 505
147 3300026041 Ga0207639_10093748 Ga0207639_100937482 505
148 3300026078 Ga0207702_10055787 Ga0207702_100557873 505
149 3300026116 Ga0207674_10001064 Ga0207674_1000106429 505
150 3300028379 Ga0268266_10000104 Ga0268266_1000010475 505
151 3300028381 Ga0268264_10000028 Ga0268264_1000002867 505
152 3300028794 Ga0307515_10113872 Ga0307515_101138722 505
153 3300039437 Ga0436365_1583419 Ga0436365_1583419_11816_13357 505
154 3300044658 Ga0466972_0016258 Ga0466972_0016258_548_2104 505
155 3300046507 Ga0495606_0014520 Ga0495606_0014520_3701_5248 505
156 3300046648 Ga0495611_0000046 Ga0495611_0000046_36480_38024 505
157 3300047443 Ga0495687_000244 Ga0495687_000244_11198_12745 505
158 3300049581 Ga0501047_0004269 Ga0501047_0004269_3306_4850 505
159 3300049705 Ga0501225_0005743 Ga0501225_0005743_1870_3396 505
160 3300049823 Ga0501044_0190611 Ga0501044_0190611_374_1951 505
161 3300005331 Ga0070670_100039269 Ga0070670_1000392693 506
162 3300005331 Ga0070670_100189289 Ga0070670_1001892891 506
163 3300005335 Ga0070666_10023569 Ga0070666_100235693 506
164 3300005364 Ga0070673_100193762 Ga0070673_1001937621 506
165 3300005366 Ga0070659_100007289 Ga0070659_1000072898 506
166 3300005456 Ga0070678_100004671 Ga0070678_1000046715 506
167 3300005535 Ga0070684_100050099 Ga0070684_1000500993 506
168 3300005564 Ga0070664_100015084 Ga0070664_1000150847 506
169 3300005616 Ga0068852_100000921 Ga0068852_10000092115 506
170 3300005617 Ga0068859_100018870 Ga0068859_1000188703 506
171 3300005834 Ga0068851_10039852 Ga0068851_100398521 506
172 3300005843 Ga0068860_100002793 Ga0068860_10000279320 506
173 3300005843 Ga0068860_100095571 Ga0068860_1000955714 506
174 3300006237 Ga0097621_100124596 Ga0097621_1001245963 506
175 3300006881 Ga0068865_100061743 Ga0068865_1000617431 506
176 3300006931 Ga0097620_100018870 Ga0097620_1000188704 506
177 3300009094 Ga0111539_10155441 Ga0111539_101554413 506
178 3300009101 Ga0105247_10016164 Ga0105247_100161642 506
179 3300009174 Ga0105241_10180239 Ga0105241_101802391 506
180 3300009176 Ga0105242_10030064 Ga0105242_100300644 506
181 3300009545 Ga0105237_10025002 Ga0105237_100250025 506
182 3300011119 Ga0105246_10051058 Ga0105246_100510582 506
183 3300011119 Ga0105246_10141628 Ga0105246_101416281 506
184 3300013307 Ga0157372_10046592 Ga0157372_100465926 506
185 3300014325 Ga0163163_10004484 Ga0163163_100044848 506
186 3300014326 Ga0157380_10004913 Ga0157380_100049139 506
187 3300025302 Ga0207426_1005082 Ga0207426_10050823 506
188 3300025304 Ga0209257_1000008 Ga0209257_100000814 506
189 3300025900 Ga0207710_10007521 Ga0207710_100075212 506
190 3300025904 Ga0207647_10000025 Ga0207647_1000002579 506
191 3300025907 Ga0207645_10004322 Ga0207645_100043223 506
192 3300025914 Ga0207671_10075765 Ga0207671_100757652 506
193 3300025925 Ga0207650_10006244 Ga0207650_100062441 506
194 3300025926 Ga0207659_10074818 Ga0207659_100748183 506
195 3300025932 Ga0207690_10003417 Ga0207690_100034173 506
196 3300025938 Ga0207704_10031630 Ga0207704_100316301 506
197 3300025942 Ga0207689_10006519 Ga0207689_100065195 506
198 3300026089 Ga0207648_10173853 Ga0207648_101738531 506
199 3300026116 Ga0207674_10078867 Ga0207674_100788675 506
200 3300026121 Ga0207683_10004980 Ga0207683_100049809 506
201 3300026142 Ga0207698_10054887 Ga0207698_100548873 506
202 3300028381 Ga0268264_10003543 Ga0268264_1000354314 506
203 3300028381 Ga0268264_10151649 Ga0268264_101516492 506
204 3300033179 Ga0307507_10056585 Ga0307507_100565853 506
205 3300037471 Ga0395905_0000565 Ga0395905_0000565_19499_21034 506
206 3300037471 Ga0395905_0174694 Ga0395905_0174694_235_1770 506
207 3300041999 Ga0439433_0003953 Ga0439433_0003953_648_2231 506
208 3300046660 Ga0495625_0072891 Ga0495625_0072891_607_2160 506
209 3300047320 Ga0495672_0002283 Ga0495672_0002283_4014_5558 506
210 3300048924 Ga0496121_0000011 Ga0496121_0000011_603371_604960 506
211 2162886007 SwRhRL2b_contig_1961597 SwRhRL2b_0312.00007100 507
212 3300003322 rootL2_10002427 rootL2_100024274 507
213 3300003323 rootH1_10010281 rootH1_100102812 507
214 3300003784 Ga0055534_1008948 Ga0055534_10089483 507
215 3300005262 Ga0065165_1000724 Ga0065165_100072415 507
216 3300005289 Ga0065704_10071604 Ga0065704_100716043 507
217 3300005337 Ga0070682_100000261 Ga0070682_10000026122 507
218 3300009036 Ga0105244_10000058 Ga0105244_1000005893 507
219 3300013308 Ga0157375_10000460 Ga0157375_100004609 507
220 3300025291 Ga0209675_1000033 Ga0209675_100003387 507
221 3300031911 Ga0307412_10000744 Ga0307412_1000074416 507
222 3300041413 Ga0439465_0003859 Ga0439465_0003859_63_1589 507
223 3300046530 Ga0495654_0000001 Ga0495654_0000001_382551_384077 507
224 3300048905 Ga0496102_0036882 Ga0496102_0036882_1896_3425 507
225 3300048919 Ga0496116_0000053 Ga0496116_0000053_94268_95797 507
226 3300048920 Ga0496117_0000089 Ga0496117_0000089_60866_62395 507
227 3300048921 Ga0496118_0002500 Ga0496118_0002500_14387_15916 507
228 3300048922 Ga0496119_0000038 Ga0496119_0000038_60859_62388 507
229 3300048924 Ga0496121_0117199 Ga0496121_0117199_115_1644 507
230 3300048925 Ga0496122_0000767 Ga0496122_0000767_17195_18724 507
231 3300048925 Ga0496122_0003884 Ga0496122_0003884_5174_6703 507
232 3300048926 Ga0496123_0000696 Ga0496123_0000696_18553_20082 507
233 3300048926 Ga0496123_0003618 Ga0496123_0003618_1327_2856 507
234 3300048927 Ga0496124_0018872 Ga0496124_0018872_343_1872 507
235 3300048928 Ga0496125_0002450 Ga0496125_0002450_19299_20828 507
236 3300048928 Ga0496125_0022907 Ga0496125_0022907_4059_5588 507
237 3300048929 Ga0496126_0062537 Ga0496126_0062537_1334_2863 507
238 3300049758 Ga0501241_000019 Ga0501241_000019_59133_60659 507
239 3300049766 Ga0501269_000076 Ga0501269_000076_28162_29688 507

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00355

Rieske

Rieske [2Fe-2S] domain

464

546

0.91

PF01266

DAO

FAD dependent oxidoreductase

74

417

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gg2-assembly1.cif.gz_A crystal structure of udp-glucose 6-dehydrogenase from porphyromonas gingivalis bound to product udp-glucuronate 0.9463 28 58
2y0d-assembly1.cif.gz_A bcec mutation y10k 0.9457 28 58
2y0d-assembly1.cif.gz_D bcec mutation y10k 0.9453 28 58
2y0d-assembly1.cif.gz_B bcec mutation y10k 0.9452 28 58
2y0d-assembly1.cif.gz_C bcec mutation y10k 0.9451 28 58
ID Description Score Start End Superfamily
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.007 30 59 3.50.50.60
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9864 29 59 3.40.50.720
af_I6XF25_1_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9819 29 58 3.40.50.720
af_Q58454_1_196_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9814 29 58 3.40.50.720
2f1kD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9804 29 56 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4R1B9H6-F1-model_v4 FAD-dependent oxidoreductase 0.9796 1 504 GO:0005737
GO:0016020
GO:0046872
GO:0051537
AF-A0A4Q3LB29-F1-model_v4 deleted 0.9725 80 505
AF-A0A2N0XJT2-F1-model_v4 (2Fe-2S)-binding protein 0.9717 1 506 GO:0005737
GO:0046872
GO:0051537
AF-A0A4Q3LB29-F1-model_v4 deleted 0.9702 80 505
AF-A0A2N0XJT2-F1-model_v4 (2Fe-2S)-binding protein 0.9653 1 506 GO:0005737
GO:0046872
GO:0051537

Feature Viewer

pLDDT pTM Quality
90.98 0.9 High
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Predicted Structure (AlphaFold2)

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