F352000

General Info

Members Datasets Scaffolds Average Seq Length
239 190 478 389

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10056127|Ga0207684_100561272
Length 406
Sequence VKTMLKQDIVREATRLTRAGQLAEATVLLQGMLRGESAQDATLRTTRRTAPTGHEPPVVDAKAHTIEETDSPHLARATSAEPRMRTPLLHRTKERFRLGLRGVTKRAPPSTPDIVPEGARFIEGTYSNPAGSRAYRLFIPSRYQGQQLPLVVMLHGCTQSPDDFAAGTRMNFIAEEQTCFVVYPAQRSEANQAKCWNWFRTADQQRGRGEPSLIAGITRQIMRDYSVDPKRVYVGGLSAGAAAAAIMGATYHDLYAAIGVHSGLACGTASDLPSAFVAMRQGGGSDDRVILGDGPLVPTIVFHGDRDITVHPNNGDQILEQSIRTTSTQKKVHRGRVPGGHAYTRTIHTDAGGRGIFEHWNIHGAGHAWSGGSPAGSYTDPRGPDATREMLRFFLEHSLPQQPGYC

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
50 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
51 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
52 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
81 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
82 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
83 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
84 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
99 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
118 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
140 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
162 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
163 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
164 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
166 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
167 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
168 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
169 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
170 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
171 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
172 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
173 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
174 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
175 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
176 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
177 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
178 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
179 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
180 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
181 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
182 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
183 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
184 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
185 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
186 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
187 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
188 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
189 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
190 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.38
Metatranscriptomes 0
Isolates 9.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.95
Nodule 11.3
Rhizoplane 1.26
Rhizosphere 70.71
Stem 0
Stem Tuber 0
Unclassified 0.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10056127 3300025910 Bacteria 3341
2 LJQas_1006119 3300000549 Bacteria 1505
3 JGI25404J52841_10002638 3300003659 Bacteria 3423
4 Ga0070683_100019775 3300005329 Bacteria 5985
5 Ga0068869_100048033 3300005334 Bacteria 3084
6 Ga0070680_100004828 3300005336 Bacteria 10145
7 Ga0070661_100018347 3300005344 Bacteria 4974
8 Ga0070668_100076514 3300005347 Bacteria 2614
9 Ga0070668_100079587 3300005347 Bacteria 2566
10 Ga0070668_100130554 3300005347 Bacteria 2016
11 Ga0070671_100089377 3300005355 Bacteria 2579
12 Ga0070709_10028960 3300005434 Bacteria 3307
13 Ga0070714_100032660 3300005435 Bacteria 4346
14 Ga0070714_100252279 3300005435 Bacteria 1632
15 Ga0070713_100005505 3300005436 Bacteria 8672
16 Ga0070713_100008633 3300005436 Bacteria 7240
17 Ga0070713_100139534 3300005436 Bacteria 2145
18 Ga0070710_10006854 3300005437 Bacteria 5498
19 Ga0070710_10013282 3300005437 Bacteria 4120
20 Ga0070711_100071934 3300005439 Bacteria 2439
21 Ga0070663_100003591 3300005455 Bacteria 8958
22 Ga0070679_100009779 3300005530 Bacteria 9070
23 Ga0070679_100262726 3300005530 Bacteria 1681
24 Ga0070684_100001252 3300005535 Bacteria 18207
25 Ga0070684_100039351 3300005535 Bacteria 4066
26 Ga0068853_100020947 3300005539 Bacteria 5441
27 Ga0070665_100072285 3300005548 Bacteria 3457
28 Ga0070665_100110106 3300005548 Bacteria 2756
29 Ga0068855_100107618 3300005563 Bacteria 3203
30 Ga0068855_100189929 3300005563 Bacteria 2317
31 Ga0068855_100191909 3300005563 Bacteria 2303
32 Ga0068856_100016046 3300005614 Bacteria 7241
33 Ga0068858_100083116 3300005842 Bacteria 2977
34 Ga0081538_10008844 3300005981 Bacteria 8477
35 Ga0081538_10047487 3300005981 Bacteria 2632
36 Ga0081540_1000005 3300005983 Bacteria 227052
37 Ga0081540_1015989 3300005983 Bacteria 4726
38 Ga0075365_10034305 3300006038 Bacteria 3277
39 Ga0075368_10000832 3300006042 Bacteria 9511
40 Ga0075364_10036840 3300006051 Bacteria 3164
41 Ga0070716_100073467 3300006173 Bacteria 2017
42 Ga0075367_10025639 3300006178 Bacteria 3336
43 Ga0075369_10009879 3300006186 Bacteria 3722
44 Ga0075366_10027212 3300006195 Bacteria 3354
45 Ga0075370_10031103 3300006353 Bacteria 2979
46 Ga0068871_100127656 3300006358 Bacteria 2154
47 Ga0099824_1017878 3300006942 Bacteria 5997
48 Ga0099824_1036286 3300006942 Bacteria 1441
49 Ga0075435_100055754 3300007076 Bacteria 3193
50 Ga0075435_100235317 3300007076 Bacteria 1557
51 Ga0099794_10015854 3300007265 Bacteria 3333
52 Ga0099794_10075127 3300007265 Bacteria 1660
53 Ga0105240_10027951 3300009093 Bacteria 7377
54 Ga0105245_10120305 3300009098 Bacteria 2452
55 Ga0105247_10115047 3300009101 Bacteria 1735
56 Ga0105243_10060582 3300009148 Bacteria 3023
57 Ga0105241_10076020 3300009174 Bacteria 2618
58 Ga0105237_10011548 3300009545 Bacteria 9341
59 Ga0105238_10008585 3300009551 Bacteria 10220
60 Ga0105238_10012021 3300009551 Bacteria 8721
61 Ga0105239_10022344 3300010375 Bacteria 6975
62 Ga0105239_10096679 3300010375 Bacteria 3263
63 Ga0157369_10045747 3300013105 Bacteria 4758
64 Ga0157369_10136537 3300013105 Bacteria 2596
65 Ga0157378_10009328 3300013297 Bacteria 8546
66 Ga0163162_10110841 3300013306 Bacteria 2841
67 Ga0157376_10015751 3300014969 Bacteria 5722
68 Ga0214544_1000879 3300021320 Bacteria 59276
69 Ga0214542_1000838 3300021321 Bacteria 59276
70 Ga0214542_1007789 3300021321 Bacteria 18318
71 Ga0214545_1000599 3300021324 Bacteria 59276
72 Ga0214543_1000692 3300021327 Bacteria 59276
73 Ga0214543_1007274 3300021327 Bacteria 19127
74 Ga0209233_1001846 3300025261 Bacteria 8133
75 Ga0209455_1014868 3300025272 Bacteria 1738
76 Ga0209758_1000631 3300025297 Bacteria 53996
77 Ga0207692_10005058 3300025898 Bacteria 5254
78 Ga0207699_10166667 3300025906 Bacteria 1471
79 Ga0207684_10043434 3300025910 Bacteria 3811
80 Ga0207654_10003699 3300025911 Bacteria 7716
81 Ga0207654_10003840 3300025911 Bacteria 7575
82 Ga0207707_10001185 3300025912 Bacteria 24547
83 Ga0207671_10029278 3300025914 Bacteria 4112
84 Ga0207693_10007782 3300025915 Bacteria 8791
85 Ga0207693_10010003 3300025915 Bacteria 7709
86 Ga0207663_10003035 3300025916 Bacteria 8125
87 Ga0207663_10176603 3300025916 Bacteria 1521
88 Ga0207657_10006555 3300025919 Bacteria 12051
89 Ga0207649_10062880 3300025920 Bacteria 2341
90 Ga0207652_10011852 3300025921 Bacteria 7033
91 Ga0207694_10027049 3300025924 Bacteria 4367
92 Ga0207694_10052772 3300025924 Bacteria 3152
93 Ga0207687_10006113 3300025927 Bacteria 7969
94 Ga0207700_10075753 3300025928 Bacteria 2608
95 Ga0207700_10238871 3300025928 Bacteria 1548
96 Ga0207664_10100978 3300025929 Bacteria 2383
97 Ga0207664_10193893 3300025929 Bacteria 1750
98 Ga0207644_10094543 3300025931 Bacteria 2233
99 Ga0207709_10112095 3300025935 Bacteria 1826
100 Ga0207665_10009490 3300025939 Bacteria 6390
101 Ga0207665_10020087 3300025939 Bacteria 4387
102 Ga0207689_10050382 3300025942 Bacteria 3434
103 Ga0207661_10000762 3300025944 Bacteria 20961
104 Ga0207668_10073440 3300025972 Bacteria 2451
105 Ga0207668_10129093 3300025972 Bacteria 1927
106 Ga0207639_10225766 3300026041 Bacteria 1620
107 Ga0207678_10010064 3300026067 Bacteria 8298
108 Ga0207678_10084443 3300026067 Bacteria 2715
109 Ga0207641_10112871 3300026088 Bacteria 2412
110 Ga0207674_10017074 3300026116 Bacteria 7922
111 Ga0207674_10198902 3300026116 Bacteria 1954
112 Ga0209389_1003699 3300027296 Bacteria 12448
113 Ga0209589_1011495 3300027357 Bacteria 12448
114 Ga0209489_105189 3300027361 Bacteria 23026
115 Ga0209489_105336 3300027361 Bacteria 22405
116 Ga0209489_114426 3300027361 Bacteria 5567
117 Ga0209700_102860 3300027363 Bacteria 34208
118 Ga0209179_1016575 3300027512 Bacteria 1384
119 Ga0209588_1001369 3300027671 Bacteria 6356
120 Ga0268266_10006705 3300028379 Bacteria 10503
121 Ga0268266_10062871 3300028379 Bacteria 3204
122 Ga0268266_10137598 3300028379 Bacteria 2189
123 Ga0265325_10002486 3300031241 Bacteria 12421
124 Ga0307509_10004649 3300031507 Bacteria 19608
125 Ga0307408_100037702 3300031548 Bacteria 3406
126 Ga0307508_10000063 3300031616 Bacteria 122536
127 Ga0307516_10051270 3300031730 Bacteria 4045
128 Ga0307516_10154659 3300031730 Bacteria 2050
129 Ga0307405_10028115 3300031731 Bacteria 3271
130 Ga0307409_100029843 3300031995 Bacteria 3909
131 Ga0307409_100141951 3300031995 Bacteria 2071
132 Ga0307416_100062060 3300032002 Bacteria 3054
133 Ga0307416_100209243 3300032002 Unclassified 1859
134 Ga0307414_10066162 3300032004 Bacteria 2582
135 Ga0307411_10189103 3300032005 Bacteria 1570
136 Ga0307415_100090304 3300032126 Bacteria 2215
137 Ga0373926_0040446 3300035083 Bacteria 1664
138 Ga0373936_0013751 3300035113 Bacteria 3089
139 Ga0373943_0030652 3300035170 Bacteria 2547
140 Ga0373946_0018624 3300035171 Bacteria 2668
141 Ga0373955_0031424 3300035172 Bacteria 2781
142 Ga0373924_0014756 3300035410 Bacteria 2956
143 Ga0373935_0053619 3300035692 Bacteria 2565
144 Ga0373927_0000989 3300035695 Bacteria 21644
145 Ga0373947_0009828 3300035725 Bacteria 5488
146 Ga0373937_0070477 3300036401 Bacteria 3225
147 Ga0373925_0003883 3300037068 Bacteria 11431
148 Ga0395900_0234467 3300037418 Bacteria 1844
149 Ga0395898_0046265 3300037466 Bacteria 4274
150 Ga0436365_1468898 3300039437 Bacteria 1446
151 Ga0436361_0097149 3300039447 Bacteria 1441
152 Ga0466972_0007221 3300044658 Bacteria 5579
153 Ga0466968_0011420 3300044735 Bacteria 3458
154 Ga0466960_0056548 3300044901 Bacteria 1910
155 Ga0495592_0041849 3300046454 Bacteria 3432
156 Ga0495603_0000326 3300046455 Bacteria 25731
157 Ga0495603_0111671 3300046455 Bacteria 1594
158 Ga0495641_0002093 3300046461 Bacteria 16137
159 Ga0495580_0034246 3300046472 Bacteria 3657
160 Ga0495582_0005472 3300046473 Bacteria 7078
161 Ga0495639_0002836 3300046475 Bacteria 7530
162 Ga0495639_0033311 3300046475 Bacteria 2301
163 Ga0495662_0031216 3300046476 Bacteria 2573
164 Ga0495664_0081303 3300046477 Bacteria 1943
165 Ga0495594_0000561 3300046499 Bacteria 19039
166 Ga0495618_0081268 3300046514 Bacteria 2069
167 Ga0495618_0152238 3300046514 Bacteria 1477
168 Ga0495628_0017717 3300046516 Bacteria 5919
169 Ga0495632_0076917 3300046519 Bacteria 1596
170 Ga0495648_0012693 3300046524 Bacteria 6263
171 Ga0495665_0016077 3300046531 Bacteria 4032
172 Ga0495640_0008675 3300046533 Bacteria 7966
173 Ga0495587_0030533 3300046536 Bacteria 3268
174 Ga0495622_0019598 3300046557 Bacteria 3149
175 Ga0495667_0038948 3300046559 Bacteria 3164
176 Ga0495634_0001670 3300046642 Bacteria 19338
177 Ga0495634_0070344 3300046642 Bacteria 2307
178 Ga0495611_0062770 3300046648 Bacteria 1690
179 Ga0495635_0000796 3300046663 Bacteria 20579
180 Ga0495659_0010291 3300046664 Bacteria 2997
181 Ga0495588_0008307 3300046674 Bacteria 4757
182 Ga0495588_0048470 3300046674 Bacteria 2182
183 Ga0495646_0043634 3300046680 Bacteria 2744
184 Ga0495646_0135851 3300046680 Bacteria 1380
185 Ga0495647_0003036 3300046681 Bacteria 5345
186 Ga0495658_0004513 3300046683 Bacteria 6845
187 Ga0495624_0008393 3300046690 Bacteria 7206
188 Ga0495624_0146868 3300046690 Bacteria 1443
189 Ga0495670_0005647 3300046691 Bacteria 6133
190 Ga0495674_0015599 3300047319 Bacteria 7095
191 Ga0495676_0157209 3300047321 Bacteria 1612
192 Ga0496102_0100937 3300048905 Bacteria 2680
193 Ga0496104_0158703 3300048907 Bacteria 2170
194 Ga0496109_0258262 3300048912 Bacteria 1641
195 Ga0496121_0015032 3300048924 Bacteria 8149
196 Ga0496121_0039668 3300048924 Bacteria 4144
197 Ga0496124_0212844 3300048927 Bacteria 1461
198 Ga0496125_0065281 3300048928 Bacteria 2885
199 Ga0496125_0238566 3300048928 Bacteria 1156
200 Ga0496126_0012691 3300048929 Bacteria 8619
201 Ga0501033_0056133 3300049570 Bacteria 2911
202 Ga0501034_0177618 3300049571 Bacteria 2095
203 nmdc:mga00v17_4149_c1 3300050491 Bacteria 7504
204 nmdc:mga07m45_10404_c1 3300050496 Bacteria 4859
205 nmdc:mga0n895_341319_c1 3300050512 Bacteria 1517
206 nmdc:mga0rr50_8905_c1 3300050513 Bacteria 6269
207 nmdc:mga0sz30_2455_c1 3300050516 Bacteria 6602
208 Ga0495601_0068640 3300053077 Bacteria 2260
209 Ga0500583_0084877 3300053092 Bacteria 1535
210 Ga0500641_0000478 3300053096 Bacteria 14590
211 Ga0500594_0021013 3300053118 Bacteria 1633
212 Ga0500604_0044062 3300053151 Bacteria 1357
213 Ga0500616_0003260 3300053153 Bacteria 12555
214 Ga0500636_0080066 3300053177 Bacteria 1883
215 Ga0590071_004260 3300059421 Bacteria 3482
216 Ga0590075_003944 3300059424 Bacteria 3516
217 2509148553 2508501128 Bacteria 8613869
218 2513629380 2513237092 Bacteria 8341956
219 2513696357 2513237101 Bacteria 7952346
220 2513892672 2513237141 Bacteria 8496279
221 2514016963 2513237161 Bacteria 8871253
222 2514017274 2513237161 Bacteria 8871253
223 2517105996 2517093001 Bacteria 9002274
224 2528852660 2528768022 Bacteria 10457665
225 2617379661 2617270741 Bacteria 8201522
226 2824602857 2824600985 Bacteria 8488197
227 2824611698 2824609381 Bacteria 8672835
228 2824734419 2824732956 Bacteria 7810675
229 2824755812 2824753945 Bacteria 9787441
230 2824764866 2824763712 Bacteria 9792355
231 2841980943 2841974524 Bacteria 8931498
232 2841985406 2841983080 Bacteria 8395090
233 2847934703 2847930680 Bacteria 9342022
234 2879083472 2879083081 Bacteria 8587928
235 2881672866 2881665667 Bacteria 8175609
236 2904715865 2904711408 Bacteria 9771557
237 3005589177 3005587118 Bacteria 7794411
238 8006966172 8006964411 Bacteria 8966052
239 8006998053 8006994254 Bacteria 8309700
240 Ga0207684_10056127
241 LJQas_1006119
242 JGI25404J52841_10002638
243 Ga0070683_100019775
244 Ga0068869_100048033
245 Ga0070680_100004828
246 Ga0070661_100018347
247 Ga0070668_100076514
248 Ga0070668_100079587
249 Ga0070668_100130554
250 Ga0070671_100089377
251 Ga0070709_10028960
252 Ga0070714_100032660
253 Ga0070714_100252279
254 Ga0070713_100005505
255 Ga0070713_100008633
256 Ga0070713_100139534
257 Ga0070710_10006854
258 Ga0070710_10013282
259 Ga0070711_100071934
260 Ga0070663_100003591
261 Ga0070679_100009779
262 Ga0070679_100262726
263 Ga0070684_100001252
264 Ga0070684_100039351
265 Ga0068853_100020947
266 Ga0070665_100072285
267 Ga0070665_100110106
268 Ga0068855_100107618
269 Ga0068855_100189929
270 Ga0068855_100191909
271 Ga0068856_100016046
272 Ga0068858_100083116
273 Ga0081538_10008844
274 Ga0081538_10047487
275 Ga0081540_1000005
276 Ga0081540_1015989
277 Ga0075365_10034305
278 Ga0075368_10000832
279 Ga0075364_10036840
280 Ga0070716_100073467
281 Ga0075367_10025639
282 Ga0075369_10009879
283 Ga0075366_10027212
284 Ga0075370_10031103
285 Ga0068871_100127656
286 Ga0099824_1017878
287 Ga0099824_1036286
288 Ga0075435_100055754
289 Ga0075435_100235317
290 Ga0099794_10015854
291 Ga0099794_10075127
292 Ga0105240_10027951
293 Ga0105245_10120305
294 Ga0105247_10115047
295 Ga0105243_10060582
296 Ga0105241_10076020
297 Ga0105237_10011548
298 Ga0105238_10008585
299 Ga0105238_10012021
300 Ga0105239_10022344
301 Ga0105239_10096679
302 Ga0157369_10045747
303 Ga0157369_10136537
304 Ga0157378_10009328
305 Ga0163162_10110841
306 Ga0157376_10015751
307 Ga0214544_1000879
308 Ga0214542_1000838
309 Ga0214542_1007789
310 Ga0214545_1000599
311 Ga0214543_1000692
312 Ga0214543_1007274
313 Ga0209233_1001846
314 Ga0209455_1014868
315 Ga0209758_1000631
316 Ga0207692_10005058
317 Ga0207699_10166667
318 Ga0207684_10043434
319 Ga0207654_10003699
320 Ga0207654_10003840
321 Ga0207707_10001185
322 Ga0207671_10029278
323 Ga0207693_10007782
324 Ga0207693_10010003
325 Ga0207663_10003035
326 Ga0207663_10176603
327 Ga0207657_10006555
328 Ga0207649_10062880
329 Ga0207652_10011852
330 Ga0207694_10027049
331 Ga0207694_10052772
332 Ga0207687_10006113
333 Ga0207700_10075753
334 Ga0207700_10238871
335 Ga0207664_10100978
336 Ga0207664_10193893
337 Ga0207644_10094543
338 Ga0207709_10112095
339 Ga0207665_10009490
340 Ga0207665_10020087
341 Ga0207689_10050382
342 Ga0207661_10000762
343 Ga0207668_10073440
344 Ga0207668_10129093
345 Ga0207639_10225766
346 Ga0207678_10010064
347 Ga0207678_10084443
348 Ga0207641_10112871
349 Ga0207674_10017074
350 Ga0207674_10198902
351 Ga0209389_1003699
352 Ga0209589_1011495
353 Ga0209489_105189
354 Ga0209489_105336
355 Ga0209489_114426
356 Ga0209700_102860
357 Ga0209179_1016575
358 Ga0209588_1001369
359 Ga0268266_10006705
360 Ga0268266_10062871
361 Ga0268266_10137598
362 Ga0265325_10002486
363 Ga0307509_10004649
364 Ga0307408_100037702
365 Ga0307508_10000063
366 Ga0307516_10051270
367 Ga0307516_10154659
368 Ga0307405_10028115
369 Ga0307409_100029843
370 Ga0307409_100141951
371 Ga0307416_100062060
372 Ga0307416_100209243
373 Ga0307414_10066162
374 Ga0307411_10189103
375 Ga0307415_100090304
376 Ga0373926_0040446
377 Ga0373936_0013751
378 Ga0373943_0030652
379 Ga0373946_0018624
380 Ga0373955_0031424
381 Ga0373924_0014756
382 Ga0373935_0053619
383 Ga0373927_0000989
384 Ga0373947_0009828
385 Ga0373937_0070477
386 Ga0373925_0003883
387 Ga0395900_0234467
388 Ga0395898_0046265
389 Ga0436365_1468898
390 Ga0436361_0097149
391 Ga0466972_0007221
392 Ga0466968_0011420
393 Ga0466960_0056548
394 Ga0495592_0041849
395 Ga0495603_0000326
396 Ga0495603_0111671
397 Ga0495641_0002093
398 Ga0495580_0034246
399 Ga0495582_0005472
400 Ga0495639_0002836
401 Ga0495639_0033311
402 Ga0495662_0031216
403 Ga0495664_0081303
404 Ga0495594_0000561
405 Ga0495618_0081268
406 Ga0495618_0152238
407 Ga0495628_0017717
408 Ga0495632_0076917
409 Ga0495648_0012693
410 Ga0495665_0016077
411 Ga0495640_0008675
412 Ga0495587_0030533
413 Ga0495622_0019598
414 Ga0495667_0038948
415 Ga0495634_0001670
416 Ga0495634_0070344
417 Ga0495611_0062770
418 Ga0495635_0000796
419 Ga0495659_0010291
420 Ga0495588_0008307
421 Ga0495588_0048470
422 Ga0495646_0043634
423 Ga0495646_0135851
424 Ga0495647_0003036
425 Ga0495658_0004513
426 Ga0495624_0008393
427 Ga0495624_0146868
428 Ga0495670_0005647
429 Ga0495674_0015599
430 Ga0495676_0157209
431 Ga0496102_0100937
432 Ga0496104_0158703
433 Ga0496109_0258262
434 Ga0496121_0015032
435 Ga0496121_0039668
436 Ga0496124_0212844
437 Ga0496125_0065281
438 Ga0496125_0238566
439 Ga0496126_0012691
440 Ga0501033_0056133
441 Ga0501034_0177618
442 nmdc:mga00v17_4149_c1
443 nmdc:mga07m45_10404_c1
444 nmdc:mga0n895_341319_c1
445 nmdc:mga0rr50_8905_c1
446 nmdc:mga0sz30_2455_c1
447 Ga0495601_0068640
448 Ga0500583_0084877
449 Ga0500641_0000478
450 Ga0500594_0021013
451 Ga0500604_0044062
452 Ga0500616_0003260
453 Ga0500636_0080066
454 Ga0590071_004260
455 Ga0590075_003944
456 2509148553
457 2513629380
458 2513696357
459 2513892672
460 2514016963
461 2514017274
462 2517105996
463 2528852660
464 2617379661
465 2824602857
466 2824611698
467 2824734419
468 2824755812
469 2824764866
470 2841980943
471 2841985406
472 2847934703
473 2879083472
474 2881672866
475 2904715865
476 3005589177
477 8006966172
478 8006998053

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10503

Esterase_PHB

Esterase PHB depolymerase

133

336

0.93

PF00756

Esterase

Putative esterase

127

343

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
8daj-assembly1.cif.gz_A structure and biochemistry of a promiscuous thermophilic polyhydroxybutyrate depolymerase from lihuaxuella thermophilia 0.8315 118 398
3wyd-assembly1.cif.gz_B c-terminal esterase domain of lc-est1 0.809 135 400
3wyd-assembly1.cif.gz_B c-terminal esterase domain of lc-est1 0.801 135 400
8jj7-assembly1.cif.gz_A error: 404 client error: for url: https://data.rcsb.org/rest/v1/core/entry/8jj7 0.7905 119 265
8daj-assembly1.cif.gz_A structure and biochemistry of a promiscuous thermophilic polyhydroxybutyrate depolymerase from lihuaxuella thermophilia 0.7739 118 398
ID Description Score Start End Superfamily
af_Q0DSM5_52_184_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.8701 332 362 3.10.450.50
af_K7L0K3_2_222_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8513 211 260 3.40.50.1820
af_I1MHU8_3_221_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8513 325 363 3.60.21.10
af_Q6EPV2_2_219_3.40.50.10900 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;PAC-like subunit 0.8135 328 363 3.40.50.10900
3wydB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.809 135 400 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A060C065-F1-model_v4 Esterase_phd 0.9131 118 264 GO:0005576
GO:0016787
AF-A0A7X6PH91-F1-model_v4 PHB depolymerase family esterase 0.881 133 260 GO:0005576
GO:0016787
AF-A0A160US92-F1-model_v4 deleted 0.8809 153 398
AF-A0A4Y9SBT8-F1-model_v4 PHB depolymerase family esterase 0.8765 119 395 GO:0005576
GO:0016787
AF-A0A250KPF9-F1-model_v4 Esterase, PHB depolymerase family 0.8755 122 402 GO:0005576
GO:0016787

Map