F351766

General Info

Members Datasets Scaffolds Average Seq Length
239 161 239 258

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100082493|Ga0070665_1000824932
Length 313
Sequence MLGTPAGSGLRRAGLNGVPGLLRILTETLHRPSTRRTYGSNEIWAREVRAGNGKRAMSDPVYALDIQGLSKSFDRPVVKDLTLRVRAGEFYALLGPNGAGKTTILRMVAGLLQPEAGGISVLGIDTRKDPIAAKSIIAWVSDEPMVYDRLTPYEYLEFVAGLWKIDAPRAQAHATELIDWLGLGPHAHQRCGGFSKGMLQKVALAGALVHDPRLIILDEPLTGLDAGSARQVKQVLLDKVRQGVTVIMTTHILEVAERMAERIGVINHGRLVAEGTLNELRARVGRETTLEEIFLDLVAQNEMNIDPAVDAAA

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
48 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
49 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
50 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
79 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
93 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
94 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
111 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
154 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
157 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
158 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.16
Metatranscriptomes 0.84
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.3
Nodule 0
Rhizoplane 2.51
Rhizosphere 85.36
Stem 0
Stem Tuber 0
Unclassified 0.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10011061 3300005327 Bacteria 7233
2 Ga0070676_10038191 3300005328 Bacteria 2773
3 Ga0070660_100058061 3300005339 Bacteria 2999
4 Ga0070661_100014416 3300005344 Bacteria 5570
5 Ga0070661_100038048 3300005344 Bacteria 3501
6 Ga0070709_10031382 3300005434 Bacteria 3195
7 Ga0070711_100011969 3300005439 Bacteria 5404
8 Ga0070678_100323831 3300005456 Bacteria 1317
9 Ga0070681_10070383 3300005458 Bacteria 3464
10 Ga0070684_100287911 3300005535 Bacteria 1506
11 Ga0068853_100000447 3300005539 Bacteria 28028
12 Ga0068853_100110020 3300005539 Bacteria 2447
13 Ga0070693_100004176 3300005547 Bacteria 6816
14 Ga0070693_100257337 3300005547 Bacteria 1159
15 Ga0070665_100082493 3300005548 Bacteria 3220
16 Ga0070704_100002047 3300005549 Bacteria 11182
17 Ga0068857_100483938 3300005577 Bacteria 1160
18 Ga0068854_100059169 3300005578 Bacteria 2768
19 Ga0068854_100085821 3300005578 Bacteria 2332
20 Ga0068856_100181921 3300005614 Bacteria 2115
21 Ga0068852_100043973 3300005616 Bacteria 3790
22 Ga0068852_100064590 3300005616 Bacteria 3191
23 Ga0068852_100210958 3300005616 Bacteria 1842
24 Ga0068852_100572952 3300005616 Bacteria 1131
25 Ga0068851_10036384 3300005834 Bacteria 2464
26 Ga0081540_1026953 3300005983 Bacteria 3267
27 Ga0070717_10075712 3300006028 Bacteria 2815
28 Ga0075365_10149653 3300006038 Bacteria 1624
29 Ga0075363_100025158 3300006048 Bacteria 3033
30 Ga0070716_100181027 3300006173 Bacteria 1383
31 Ga0075367_10350157 3300006178 Bacteria 932
32 Ga0075366_10000736 3300006195 Bacteria 15582
33 Ga0075366_10061379 3300006195 Bacteria 2234
34 Ga0075366_10152597 3300006195 Bacteria 1399
35 Ga0075370_10034341 3300006353 Bacteria 2843
36 Ga0075370_10061795 3300006353 Bacteria 2134
37 Ga0075370_10100584 3300006353 Bacteria 1673
38 Ga0075433_10011166 3300006852 Bacteria 7225
39 Ga0075434_100067151 3300006871 Bacteria 3573
40 Ga0075434_100077228 3300006871 Bacteria 3325
41 Ga0105240_10161565 3300009093 Bacteria 2660
42 Ga0111539_10189645 3300009094 Bacteria 2399
43 Ga0105245_10540824 3300009098 Bacteria 1186
44 Ga0114129_10233121 3300009147 Bacteria 2478
45 Ga0105241_10041638 3300009174 Bacteria 3472
46 Ga0105241_10051131 3300009174 Bacteria 3150
47 Ga0105237_10001727 3300009545 Bacteria 28221
48 Ga0105237_10124616 3300009545 Bacteria 2571
49 Ga0105238_10012903 3300009551 Bacteria 8432
50 Ga0105238_10065485 3300009551 Bacteria 3635
51 Ga0105249_10073492 3300009553 Bacteria 3163
52 Ga0105239_10005005 3300010375 Bacteria 15643
53 Ga0105239_10111622 3300010375 Bacteria 3031
54 Ga0157373_10020687 3300013100 Bacteria 4780
55 Ga0157373_10067887 3300013100 Bacteria 2521
56 Ga0157369_10115052 3300013105 Bacteria 2857
57 Ga0157369_10213311 3300013105 Bacteria 2023
58 Ga0157369_11073204 3300013105 Bacteria 823
59 Ga0157374_10070017 3300013296 Bacteria 3304
60 Ga0157372_10027832 3300013307 Bacteria 6161
61 Ga0157372_10256809 3300013307 Bacteria 2029
62 Ga0157372_10258020 3300013307 Bacteria 2024
63 Ga0163163_10188014 3300014325 Bacteria 2113
64 Ga0157380_10532088 3300014326 Bacteria 1149
65 Ga0157379_10122088 3300014968 Bacteria 2344
66 Ga0206356_11369564 3300020070 Bacteria 915
67 Ga0206353_10097412 3300020082 Bacteria 1432
68 Ga0224572_1010086 3300024225 Bacteria 1771
69 Ga0228598_1000676 3300024227 Bacteria 7205
70 Ga0209233_1000377 3300025261 Bacteria 39032
71 Ga0207656_10016875 3300025321 Bacteria 2849
72 Ga0207699_10020879 3300025906 Bacteria 3519
73 Ga0207705_10042812 3300025909 Bacteria 3251
74 Ga0207654_10011036 3300025911 Bacteria 4598
75 Ga0207654_10375940 3300025911 Bacteria 983
76 Ga0207695_10248908 3300025913 Bacteria 1677
77 Ga0207695_10325532 3300025913 Bacteria 1426
78 Ga0207695_10542177 3300025913 Bacteria 1045
79 Ga0207671_10001547 3300025914 Bacteria 26308
80 Ga0207671_10358887 3300025914 Bacteria 1156
81 Ga0207693_10060920 3300025915 Bacteria 2956
82 Ga0207663_10103816 3300025916 Bacteria 1915
83 Ga0207663_10304328 3300025916 Bacteria 1192
84 Ga0207649_10001881 3300025920 Bacteria 11982
85 Ga0207649_10096053 3300025920 Bacteria 1951
86 Ga0207652_10235970 3300025921 Bacteria 1648
87 Ga0207652_10276925 3300025921 Bacteria 1513
88 Ga0207694_10328438 3300025924 Bacteria 1263
89 Ga0207700_10083755 3300025928 Bacteria 2497
90 Ga0207669_10399395 3300025937 Bacteria 1076
91 Ga0207665_10064076 3300025939 Bacteria 2497
92 Ga0207661_10325087 3300025944 Bacteria 1383
93 Ga0207667_10011361 3300025949 Bacteria 10357
94 Ga0207667_10187975 3300025949 Bacteria 2120
95 Ga0207667_10594676 3300025949 Bacteria 1116
96 Ga0207651_10259987 3300025960 Bacteria 1425
97 Ga0207712_10044379 3300025961 Bacteria 3072
98 Ga0207640_10047145 3300025981 Bacteria 2778
99 Ga0207639_10005402 3300026041 Bacteria 8640
100 Ga0207639_10014125 3300026041 Bacteria 5606
101 Ga0207639_10334085 3300026041 Bacteria 1349
102 Ga0207702_10006856 3300026078 Bacteria 9769
103 Ga0207702_10060128 3300026078 Bacteria 3238
104 Ga0207702_10608846 3300026078 Bacteria 1072
105 Ga0207648_10146114 3300026089 Bacteria 2086
106 Ga0207674_10185350 3300026116 Bacteria 2032
107 Ga0207698_10028929 3300026142 Bacteria 3960
108 Ga0207698_10143338 3300026142 Bacteria 2062
109 Ga0207698_10146323 3300026142 Bacteria 2044
110 Ga0207698_10194915 3300026142 Bacteria 1809
111 Ga0207698_10220883 3300026142 Bacteria 1712
112 Ga0268266_10000732 3300028379 Bacteria 44041
113 Ga0268266_10240534 3300028379 Bacteria 1671
114 Ga0268264_10519280 3300028381 Bacteria 1164
115 Ga0265334_10070931 3300028573 Bacteria 1298
116 Ga0265338_10018493 3300028800 Bacteria 7458
117 Ga0265330_10007806 3300031235 Bacteria 5194
118 Ga0265325_10016921 3300031241 Bacteria 4065
119 Ga0265325_10032992 3300031241 Bacteria 2762
120 Ga0265340_10116023 3300031247 Bacteria 1234
121 Ga0265339_10001143 3300031249 Bacteria 20024
122 Ga0265339_10022892 3300031249 Bacteria 3614
123 Ga0265327_10038577 3300031251 Bacteria 2605
124 Ga0265316_10059197 3300031344 Bacteria 2980
125 Ga0265316_10061158 3300031344 Bacteria 2925
126 Ga0265316_10112350 3300031344 Bacteria 2062
127 Ga0265313_10000158 3300031595 Bacteria 70599
128 Ga0265313_10001117 3300031595 Bacteria 25638
129 Ga0265313_10022532 3300031595 Bacteria 3414
130 Ga0265342_10028628 3300031712 Bacteria 3467
131 Ga0265342_10171444 3300031712 Bacteria 1193
132 Ga0316576_10064438 3300031727 Bacteria 2692
133 Ga0307516_10114066 3300031730 Bacteria 2500
134 Ga0307410_10209780 3300031852 Bacteria 1492
135 Ga0307412_10405040 3300031911 Bacteria 1112
136 Ga0307414_10610692 3300032004 Bacteria 979
137 Ga0307510_10122703 3300033180 Bacteria 2297
138 Ga0373955_0022601 3300035172 Bacteria 3192
139 Ga0316574_0088254 3300035398 Bacteria 1975
140 Ga0316574_0218316 3300035398 Bacteria 1222
141 Ga0373924_0143349 3300035410 Bacteria 1043
142 Ga0373931_0012742 3300035691 Bacteria 4080
143 Ga0373927_0013326 3300035695 Bacteria 5465
144 Ga0373937_0000493 3300036401 Bacteria 35952
145 Ga0316584_0009141 3300036712 Bacteria 6863
146 Ga0373925_0047505 3300037068 Bacteria 3195
147 Ga0395900_0080981 3300037418 Bacteria 3336
148 Ga0395900_0192395 3300037418 Bacteria 2068
149 Ga0395898_0291231 3300037466 Bacteria 1557
150 Ga0395905_0143851 3300037471 Bacteria 2244
151 Ga0395901_0013100 3300038443 Bacteria 8415
152 Ga0439465_0065608 3300041413 Bacteria 1209
153 Ga0466967_0049119 3300045976 Bacteria 3688
154 Ga0495590_0113901 3300046457 Bacteria 966
155 Ga0495629_0104757 3300046459 Bacteria 1973
156 Ga0495629_0170279 3300046459 Bacteria 1511
157 Ga0495638_0023114 3300046460 Bacteria 4071
158 Ga0495638_0047157 3300046460 Bacteria 2703
159 Ga0495651_0232891 3300046462 Bacteria 1267
160 Ga0495582_0203111 3300046473 Bacteria 1132
161 Ga0495584_0010033 3300046491 Bacteria 4862
162 Ga0495628_0171718 3300046516 Bacteria 1644
163 Ga0495640_0074771 3300046533 Bacteria 2264
164 Ga0495640_0299435 3300046533 Bacteria 999
165 Ga0495622_0110455 3300046557 Bacteria 1259
166 Ga0495667_0321101 3300046559 Bacteria 980
167 Ga0495634_0046979 3300046642 Bacteria 2911
168 Ga0495599_0103748 3300046678 Bacteria 1772
169 Ga0495658_0056764 3300046683 Bacteria 2234
170 Ga0495674_0162462 3300047319 Bacteria 1868
171 Ga0495680_0114808 3300047322 Bacteria 1993
172 Ga0495684_0466481 3300047471 Bacteria 874
173 Ga0496102_0145646 3300048905 Bacteria 2223
174 Ga0496104_0001323 3300048907 Bacteria 21384
175 Ga0496105_0030592 3300048908 Bacteria 4411
176 Ga0496110_0164432 3300048913 Bacteria 2012
177 Ga0496114_0162951 3300048917 Bacteria 1940
178 Ga0496115_0128894 3300048918 Bacteria 2084
179 Ga0501031_0008841 3300049568 Bacteria 6548
180 Ga0501033_0239448 3300049570 Bacteria 1287
181 Ga0501034_0005988 3300049571 Bacteria 13156
182 Ga0501034_0208064 3300049571 Bacteria 1912
183 Ga0501034_0310804 3300049571 Bacteria 1510
184 Ga0501034_0539883 3300049571 Bacteria 1076
185 Ga0501036_0020058 3300049572 Bacteria 5613
186 Ga0501036_0344521 3300049572 Bacteria 1245
187 Ga0501037_0055718 3300049573 Bacteria 2890
188 Ga0501037_0121727 3300049573 Bacteria 1876
189 Ga0501038_0011004 3300049574 Bacteria 8260
190 Ga0501038_0032998 3300049574 Bacteria 4562
191 Ga0501038_0122169 3300049574 Bacteria 2146
192 Ga0501038_0262266 3300049574 Bacteria 1365
193 Ga0501038_0302311 3300049574 Bacteria 1255
194 Ga0501039_0026272 3300049575 Bacteria 4474
195 Ga0501043_0148476 3300049579 Bacteria 1835
196 Ga0501046_0321917 3300049580 Bacteria 1127
197 Ga0501047_0010863 3300049581 Bacteria 8606
198 Ga0501047_0105720 3300049581 Bacteria 2695
199 Ga0501070_0025737 3300049586 Bacteria 4936
200 Ga0501070_0045354 3300049586 Bacteria 3656
201 Ga0501070_0232211 3300049586 Bacteria 1511
202 Ga0501070_0376235 3300049586 Bacteria 1151
203 Ga0501070_0508507 3300049586 Bacteria 967
204 Ga0501072_0134483 3300049588 Bacteria 1972
205 Ga0501074_0033077 3300049590 Bacteria 3747
206 Ga0501077_0192209 3300049593 Bacteria 1297
207 Ga0501080_0234841 3300049742 Bacteria 1675
208 Ga0501080_0360649 3300049742 Bacteria 1311
209 Ga0501083_0008353 3300049744 Bacteria 7318
210 Ga0501083_0323968 3300049744 Bacteria 1002
211 Ga0501035_0036359 3300049822 Bacteria 4463
212 Ga0501035_0392586 3300049822 Bacteria 1155
213 Ga0501044_0027271 3300049823 Bacteria 6039
214 Ga0501044_0027435 3300049823 Bacteria 6019
215 Ga0501044_0104079 3300049823 Bacteria 2852
216 Ga0501044_0114312 3300049823 Bacteria 2705
217 Ga0501044_0270235 3300049823 Bacteria 1636
218 Ga0501044_0633533 3300049823 Bacteria 959
219 nmdc:mga03683_8342_c1 3300050489 Bacteria 3639
220 nmdc:mga03n38_81703_c1 3300050490 Bacteria 1520
221 nmdc:mga0k408_381461_c1 3300050493 Bacteria 840
222 nmdc:mga0k408_51867_c1 3300050493 Bacteria 2377
223 nmdc:mga07m45_61780_c1 3300050496 Bacteria 2122
224 nmdc:mga07m45_67474_c1 3300050496 Bacteria 2033
225 nmdc:mga0n895_10399_c1 3300050512 Bacteria 8216
226 nmdc:mga0n895_62925_c1 3300050512 Bacteria 3669
227 nmdc:mga0a205_28490_c1 3300050515 Bacteria 5341
228 Ga0495601_0067622 3300053077 Bacteria 2276
229 Ga0500610_0132162 3300053079 Bacteria 1268
230 Ga0500643_004402 3300053087 Bacteria 6388
231 Ga0500644_0001264 3300053088 Bacteria 6905
232 Ga0500651_0015564 3300053093 Bacteria 4669
233 Ga0500651_0183897 3300053093 Bacteria 1240
234 Ga0500566_0113866 3300053094 Bacteria 1467
235 Ga0500595_000006 3300053119 Bacteria 300857
236 Ga0500568_0018789 3300053139 Bacteria 3016
237 Ga0500616_0043825 3300053153 Bacteria 2389
238 Ga0500616_0050730 3300053153 Bacteria 2190
239 Ga0500645_000106 3300053730 Bacteria 67066

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046459 Ga0495629_0104757 Ga0495629_0104757_848_1636 243
2 3300005549 Ga0070704_100002047 Ga0070704_10000204714 246
3 3300009553 Ga0105249_10073492 Ga0105249_100734922 246
4 3300025961 Ga0207712_10044379 Ga0207712_100443792 246
5 3300031241 Ga0265325_10032992 Ga0265325_100329923 246
6 3300013105 Ga0157369_10213311 Ga0157369_102133112 247
7 3300014968 Ga0157379_10122088 Ga0157379_101220883 247
8 3300024227 Ga0228598_1000676 Ga0228598_10006766 247
9 3300031249 Ga0265339_10022892 Ga0265339_100228923 247
10 3300031344 Ga0265316_10061158 Ga0265316_100611583 247
11 3300031595 Ga0265313_10001117 Ga0265313_1000111714 247
12 3300031595 Ga0265313_10022532 Ga0265313_100225323 247
13 3300031712 Ga0265342_10028628 Ga0265342_100286284 247
14 3300049574 Ga0501038_0122169 Ga0501038_0122169_634_1413 247
15 3300049574 Ga0501038_0302311 Ga0501038_0302311_451_1230 247
16 3300049579 Ga0501043_0148476 Ga0501043_0148476_470_1249 247
17 3300049581 Ga0501047_0010863 Ga0501047_0010863_6650_7429 247
18 3300049586 Ga0501070_0376235 Ga0501070_0376235_146_925 247
19 3300049588 Ga0501072_0134483 Ga0501072_0134483_568_1326 247
20 3300049590 Ga0501074_0033077 Ga0501074_0033077_22_783 247
21 3300049593 Ga0501077_0192209 Ga0501077_0192209_453_1214 247
22 3300049742 Ga0501080_0234841 Ga0501080_0234841_30_788 247
23 3300049742 Ga0501080_0360649 Ga0501080_0360649_324_1103 247
24 3300049744 Ga0501083_0008353 Ga0501083_0008353_2100_2861 247
25 3300049823 Ga0501044_0027435 Ga0501044_0027435_4709_5470 247
26 3300049823 Ga0501044_0270235 Ga0501044_0270235_73_852 247
27 3300049823 Ga0501044_0633533 Ga0501044_0633533_145_924 247
28 3300005458 Ga0070681_10070383 Ga0070681_100703832 248
29 3300005547 Ga0070693_100257337 Ga0070693_1002573372 248
30 3300006038 Ga0075365_10149653 Ga0075365_101496532 248
31 3300006195 Ga0075366_10000736 Ga0075366_1000073611 248
32 3300006195 Ga0075366_10152597 Ga0075366_101525972 248
33 3300006871 Ga0075434_100077228 Ga0075434_1000772282 248
34 3300009147 Ga0114129_10233121 Ga0114129_102331211 248
35 3300013100 Ga0157373_10067887 Ga0157373_100678872 248
36 3300020070 Ga0206356_11369564 Ga0206356_113695641 248
37 3300020082 Ga0206353_10097412 Ga0206353_100974121 248
38 3300024225 Ga0224572_1010086 Ga0224572_10100861 248
39 3300026089 Ga0207648_10146114 Ga0207648_101461142 248
40 3300035410 Ga0373924_0143349 Ga0373924_0143349_191_949 248
41 3300046459 Ga0495629_0170279 Ga0495629_0170279_133_915 248
42 3300046460 Ga0495638_0023114 Ga0495638_0023114_1622_2380 248
43 3300046460 Ga0495638_0047157 Ga0495638_0047157_837_1598 248
44 3300046462 Ga0495651_0232891 Ga0495651_0232891_301_1089 248
45 3300046491 Ga0495584_0010033 Ga0495584_0010033_3403_4161 248
46 3300046516 Ga0495628_0171718 Ga0495628_0171718_702_1484 248
47 3300046533 Ga0495640_0074771 Ga0495640_0074771_1094_1876 248
48 3300046559 Ga0495667_0321101 Ga0495667_0321101_65_847 248
49 3300046642 Ga0495634_0046979 Ga0495634_0046979_1649_2431 248
50 3300047319 Ga0495674_0162462 Ga0495674_0162462_80_862 248
51 3300047322 Ga0495680_0114808 Ga0495680_0114808_801_1583 248
52 3300047471 Ga0495684_0466481 Ga0495684_0466481_69_851 248
53 3300048905 Ga0496102_0145646 Ga0496102_0145646_1075_1842 248
54 3300048907 Ga0496104_0001323 Ga0496104_0001323_9093_9860 248
55 3300048908 Ga0496105_0030592 Ga0496105_0030592_110_877 248
56 3300048913 Ga0496110_0164432 Ga0496110_0164432_658_1416 248
57 3300048917 Ga0496114_0162951 Ga0496114_0162951_287_1054 248
58 3300048918 Ga0496115_0128894 Ga0496115_0128894_282_1040 248
59 3300049744 Ga0501083_0323968 Ga0501083_0323968_183_941 248
60 3300050493 nmdc:mga0k408_51867_c1 nmdc:mga0k408_51867_c1_437_1195 248
61 3300050512 nmdc:mga0n895_62925_c1 nmdc:mga0n895_62925_c1_533_1300 248
62 3300053077 Ga0495601_0067622 Ga0495601_0067622_1236_2018 248
63 3300053079 Ga0500610_0132162 Ga0500610_0132162_131_889 248
64 3300053087 Ga0500643_004402 Ga0500643_004402_3818_4579 248
65 3300053093 Ga0500651_0015564 Ga0500651_0015564_2330_3103 248
66 3300053093 Ga0500651_0183897 Ga0500651_0183897_256_1017 248
67 3300053094 Ga0500566_0113866 Ga0500566_0113866_318_1079 248
68 3300053119 Ga0500595_000006 Ga0500595_000006_152399_153160 248
69 3300053153 Ga0500616_0050730 Ga0500616_0050730_87_845 248
70 3300053730 Ga0500645_000106 Ga0500645_000106_63243_64004 248
71 3300005434 Ga0070709_10031382 Ga0070709_100313822 249
72 3300005439 Ga0070711_100011969 Ga0070711_1000119697 249
73 3300005547 Ga0070693_100004176 Ga0070693_1000041766 249
74 3300005614 Ga0068856_100181921 Ga0068856_1001819212 249
75 3300005616 Ga0068852_100572952 Ga0068852_1005729522 249
76 3300005983 Ga0081540_1026953 Ga0081540_10269533 249
77 3300006028 Ga0070717_10075712 Ga0070717_100757123 249
78 3300006173 Ga0070716_100181027 Ga0070716_1001810271 249
79 3300006178 Ga0075367_10350157 Ga0075367_103501572 249
80 3300006852 Ga0075433_10011166 Ga0075433_100111666 249
81 3300006871 Ga0075434_100067151 Ga0075434_1000671512 249
82 3300009094 Ga0111539_10189645 Ga0111539_101896453 249
83 3300009174 Ga0105241_10051131 Ga0105241_100511313 249
84 3300013100 Ga0157373_10020687 Ga0157373_100206872 249
85 3300013105 Ga0157369_11073204 Ga0157369_110732041 249
86 3300013307 Ga0157372_10256809 Ga0157372_102568092 249
87 3300025906 Ga0207699_10020879 Ga0207699_100208792 249
88 3300025911 Ga0207654_10011036 Ga0207654_100110363 249
89 3300025911 Ga0207654_10375940 Ga0207654_103759402 249
90 3300025915 Ga0207693_10060920 Ga0207693_100609202 249
91 3300025916 Ga0207663_10103816 Ga0207663_101038162 249
92 3300025916 Ga0207663_10304328 Ga0207663_103043282 249
93 3300025921 Ga0207652_10276925 Ga0207652_102769252 249
94 3300025928 Ga0207700_10083755 Ga0207700_100837552 249
95 3300025939 Ga0207665_10064076 Ga0207665_100640762 249
96 3300026041 Ga0207639_10334085 Ga0207639_103340852 249
97 3300026142 Ga0207698_10143338 Ga0207698_101433382 249
98 3300028381 Ga0268264_10519280 Ga0268264_105192801 249
99 3300031344 Ga0265316_10112350 Ga0265316_101123502 249
100 3300031727 Ga0316576_10064438 Ga0316576_100644382 249
101 3300035172 Ga0373955_0022601 Ga0373955_0022601_591_1367 249
102 3300035398 Ga0316574_0088254 Ga0316574_0088254_725_1492 249
103 3300035398 Ga0316574_0218316 Ga0316574_0218316_76_843 249
104 3300035691 Ga0373931_0012742 Ga0373931_0012742_272_1036 249
105 3300035695 Ga0373927_0013326 Ga0373927_0013326_3682_4446 249
106 3300036401 Ga0373937_0000493 Ga0373937_0000493_12634_13410 249
107 3300036712 Ga0316584_0009141 Ga0316584_0009141_2709_3476 249
108 3300037068 Ga0373925_0047505 Ga0373925_0047505_1391_2155 249
109 3300037418 Ga0395900_0080981 Ga0395900_0080981_2386_3183 249
110 3300038443 Ga0395901_0013100 Ga0395901_0013100_6604_7401 249
111 3300045976 Ga0466967_0049119 Ga0466967_0049119_1637_2491 249
112 3300046457 Ga0495590_0113901 Ga0495590_0113901_104_868 249
113 3300046473 Ga0495582_0203111 Ga0495582_0203111_122_886 249
114 3300046533 Ga0495640_0299435 Ga0495640_0299435_188_964 249
115 3300046557 Ga0495622_0110455 Ga0495622_0110455_309_1091 249
116 3300046678 Ga0495599_0103748 Ga0495599_0103748_279_1055 249
117 3300046683 Ga0495658_0056764 Ga0495658_0056764_219_983 249
118 3300050512 nmdc:mga0n895_10399_c1 nmdc:mga0n895_10399_c1_6740_7504 249
119 3300050515 nmdc:mga0a205_28490_c1 nmdc:mga0a205_28490_c1_1016_1780 249
120 3300005535 Ga0070684_100287911 Ga0070684_1002879111 250
121 3300009093 Ga0105240_10161565 Ga0105240_101615652 250
122 3300009545 Ga0105237_10124616 Ga0105237_101246162 250
123 3300025913 Ga0207695_10542177 Ga0207695_105421771 250
124 3300025914 Ga0207671_10358887 Ga0207671_103588872 250
125 3300025944 Ga0207661_10325087 Ga0207661_103250872 250
126 3300031247 Ga0265340_10116023 Ga0265340_101160232 250
127 3300053088 Ga0500644_0001264 Ga0500644_0001264_1298_2062 250
128 3300005577 Ga0068857_100483938 Ga0068857_1004839382 252
129 3300031730 Ga0307516_10114066 Ga0307516_101140662 252
130 3300006353 Ga0075370_10061795 Ga0075370_100617952 253
131 3300009545 Ga0105237_10001727 Ga0105237_1000172725 253
132 3300010375 Ga0105239_10005005 Ga0105239_1000500513 253
133 3300013296 Ga0157374_10070017 Ga0157374_100700172 253
134 3300025261 Ga0209233_1000377 Ga0209233_100037719 253
135 3300025914 Ga0207671_10001547 Ga0207671_1000154712 253
136 3300025921 Ga0207652_10235970 Ga0207652_102359702 253
137 3300028379 Ga0268266_10000732 Ga0268266_1000073225 253
138 3300049570 Ga0501033_0239448 Ga0501033_0239448_289_1056 253
139 3300049572 Ga0501036_0344521 Ga0501036_0344521_15_782 253
140 3300049573 Ga0501037_0121727 Ga0501037_0121727_854_1627 253
141 3300049574 Ga0501038_0032998 Ga0501038_0032998_2678_3445 253
142 3300049574 Ga0501038_0262266 Ga0501038_0262266_451_1224 253
143 3300049580 Ga0501046_0321917 Ga0501046_0321917_43_810 253
144 3300049581 Ga0501047_0105720 Ga0501047_0105720_768_1535 253
145 3300049586 Ga0501070_0045354 Ga0501070_0045354_277_1044 253
146 3300049586 Ga0501070_0232211 Ga0501070_0232211_699_1466 253
147 3300049586 Ga0501070_0508507 Ga0501070_0508507_134_901 253
148 3300049822 Ga0501035_0036359 Ga0501035_0036359_2574_3347 253
149 3300049823 Ga0501044_0027271 Ga0501044_0027271_1345_2118 253
150 3300049823 Ga0501044_0114312 Ga0501044_0114312_665_1432 253
151 3300053139 Ga0500568_0018789 Ga0500568_0018789_1168_1929 253
152 3300031251 Ga0265327_10038577 Ga0265327_100385772 254
153 3300033180 Ga0307510_10122703 Ga0307510_101227032 254
154 3300049571 Ga0501034_0539883 Ga0501034_0539883_37_801 254
155 3300053153 Ga0500616_0043825 Ga0500616_0043825_211_975 254
156 3300026041 Ga0207639_10014125 Ga0207639_100141254 255
157 3300049571 Ga0501034_0005988 Ga0501034_0005988_7546_8313 255
158 3300005344 Ga0070661_100014416 Ga0070661_1000144162 256
159 3300005539 Ga0068853_100000447 Ga0068853_10000044720 256
160 3300005578 Ga0068854_100059169 Ga0068854_1000591693 256
161 3300005616 Ga0068852_100043973 Ga0068852_1000439734 256
162 3300005834 Ga0068851_10036384 Ga0068851_100363842 256
163 3300009174 Ga0105241_10041638 Ga0105241_100416383 256
164 3300009551 Ga0105238_10065485 Ga0105238_100654854 256
165 3300025321 Ga0207656_10016875 Ga0207656_100168752 256
166 3300025913 Ga0207695_10325532 Ga0207695_103255322 256
167 3300025920 Ga0207649_10001881 Ga0207649_1000188111 256
168 3300025924 Ga0207694_10328438 Ga0207694_103284382 256
169 3300025949 Ga0207667_10187975 Ga0207667_101879752 256
170 3300025981 Ga0207640_10047145 Ga0207640_100471452 256
171 3300026041 Ga0207639_10005402 Ga0207639_100054027 256
172 3300026116 Ga0207674_10185350 Ga0207674_101853502 256
173 3300026142 Ga0207698_10028929 Ga0207698_100289293 256
174 3300026142 Ga0207698_10146323 Ga0207698_101463232 256
175 3300005327 Ga0070658_10011061 Ga0070658_100110618 257
176 3300005328 Ga0070676_10038191 Ga0070676_100381913 257
177 3300005339 Ga0070660_100058061 Ga0070660_1000580612 257
178 3300005344 Ga0070661_100038048 Ga0070661_1000380484 257
179 3300005456 Ga0070678_100323831 Ga0070678_1003238312 257
180 3300005539 Ga0068853_100110020 Ga0068853_1001100203 257
181 3300005548 Ga0070665_100082493 Ga0070665_1000824932 257
182 3300005578 Ga0068854_100085821 Ga0068854_1000858213 257
183 3300005616 Ga0068852_100064590 Ga0068852_1000645903 257
184 3300005616 Ga0068852_100210958 Ga0068852_1002109583 257
185 3300006048 Ga0075363_100025158 Ga0075363_1000251582 257
186 3300006195 Ga0075366_10061379 Ga0075366_100613791 257
187 3300006353 Ga0075370_10034341 Ga0075370_100343413 257
188 3300006353 Ga0075370_10100584 Ga0075370_101005842 257
189 3300009098 Ga0105245_10540824 Ga0105245_105408242 257
190 3300009551 Ga0105238_10012903 Ga0105238_100129039 257
191 3300010375 Ga0105239_10111622 Ga0105239_101116223 257
192 3300013105 Ga0157369_10115052 Ga0157369_101150522 257
193 3300013307 Ga0157372_10027832 Ga0157372_100278325 257
194 3300013307 Ga0157372_10258020 Ga0157372_102580202 257
195 3300014325 Ga0163163_10188014 Ga0163163_101880142 257
196 3300014326 Ga0157380_10532088 Ga0157380_105320881 257
197 3300025909 Ga0207705_10042812 Ga0207705_100428122 257
198 3300025913 Ga0207695_10248908 Ga0207695_102489082 257
199 3300025920 Ga0207649_10096053 Ga0207649_100960532 257
200 3300025937 Ga0207669_10399395 Ga0207669_103993951 257
201 3300025949 Ga0207667_10011361 Ga0207667_1001136111 257
202 3300025949 Ga0207667_10594676 Ga0207667_105946762 257
203 3300025960 Ga0207651_10259987 Ga0207651_102599872 257
204 3300026078 Ga0207702_10006856 Ga0207702_1000685611 257
205 3300026078 Ga0207702_10060128 Ga0207702_100601282 257
206 3300026078 Ga0207702_10608846 Ga0207702_106088462 257
207 3300026142 Ga0207698_10194915 Ga0207698_101949151 257
208 3300026142 Ga0207698_10220883 Ga0207698_102208832 257
209 3300028379 Ga0268266_10240534 Ga0268266_102405342 257
210 3300028573 Ga0265334_10070931 Ga0265334_100709312 257
211 3300028800 Ga0265338_10018493 Ga0265338_100184932 257
212 3300031235 Ga0265330_10007806 Ga0265330_100078063 257
213 3300031241 Ga0265325_10016921 Ga0265325_100169215 257
214 3300031249 Ga0265339_10001143 Ga0265339_100011436 257
215 3300031344 Ga0265316_10059197 Ga0265316_100591972 257
216 3300031595 Ga0265313_10000158 Ga0265313_1000015857 257
217 3300031712 Ga0265342_10171444 Ga0265342_101714442 257
218 3300031852 Ga0307410_10209780 Ga0307410_102097802 257
219 3300031911 Ga0307412_10405040 Ga0307412_104050401 257
220 3300032004 Ga0307414_10610692 Ga0307414_106106922 257
221 3300037418 Ga0395900_0192395 Ga0395900_0192395_293_1066 257
222 3300037466 Ga0395898_0291231 Ga0395898_0291231_431_1204 257
223 3300037471 Ga0395905_0143851 Ga0395905_0143851_1172_1945 257
224 3300041413 Ga0439465_0065608 Ga0439465_0065608_225_998 257
225 3300049568 Ga0501031_0008841 Ga0501031_0008841_58_846 257
226 3300049571 Ga0501034_0208064 Ga0501034_0208064_1056_1829 257
227 3300049571 Ga0501034_0310804 Ga0501034_0310804_59_832 257
228 3300049572 Ga0501036_0020058 Ga0501036_0020058_734_1522 257
229 3300049573 Ga0501037_0055718 Ga0501037_0055718_625_1413 257
230 3300049574 Ga0501038_0011004 Ga0501038_0011004_3724_4512 257
231 3300049575 Ga0501039_0026272 Ga0501039_0026272_3369_4157 257
232 3300049586 Ga0501070_0025737 Ga0501070_0025737_294_1082 257
233 3300049822 Ga0501035_0392586 Ga0501035_0392586_249_1037 257
234 3300049823 Ga0501044_0104079 Ga0501044_0104079_118_906 257
235 3300050489 nmdc:mga03683_8342_c1 nmdc:mga03683_8342_c1_2438_3211 257
236 3300050490 nmdc:mga03n38_81703_c1 nmdc:mga03n38_81703_c1_656_1429 257
237 3300050493 nmdc:mga0k408_381461_c1 nmdc:mga0k408_381461_c1_11_784 257
238 3300050496 nmdc:mga07m45_61780_c1 nmdc:mga07m45_61780_c1_188_961 257
239 3300050496 nmdc:mga07m45_67474_c1 nmdc:mga07m45_67474_c1_526_1299 257

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

78

222

0.97

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

190

257

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9553 6 227
8eeb-assembly1.cif.gz_A cryo-em structure of human abca7 in digitonin 0.948 5 225
8ee6-assembly1.cif.gz_A cryo-em structure of human abca7 in pe/ch nanodiscs 0.9471 5 225
7lkp-assembly1.cif.gz_A structure of atp-free human abca4 0.9376 5 229
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9375 6 241
ID Description Score Start End Superfamily
af_E9PWJ7_506_745_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9564 6 229 3.40.50.300
af_P36879_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9526 5 234 3.40.50.300
af_A1ZBS3_1241_1472_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9508 8 234 3.40.50.300
af_Q9XW49_440_685_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9494 6 234 3.40.50.300
af_Q9VRG3_531_774_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9493 6 234 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0S7XAU1-F1-model_v4 ABC transporter domain-containing protein 0.9673 8 229 GO:0005524
GO:0016887
AF-A0A428Z536-F1-model_v4 Transport permease protein 0.9661 6 228 GO:0005524
GO:0005886
GO:0016887
GO:0043215
GO:0046677
GO:0140359
GO:1900753
AF-A0A075HQM6-F1-model_v4 ABC transporter-like protein (ABC-2.AB.A) 0.9646 6 229 GO:0005524
GO:0016887
AF-A0A6G2UJN6-F1-model_v4 ATP-binding cassette domain-containing protein 0.964 1 196 GO:0005524
GO:0016887
GO:0046677
AF-A0A3B9FTI4-F1-model_v4 Export ABC transporter ATP-binding protein 0.9623 8 227 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
89.28 0.86 High
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Predicted Structure (AlphaFold2)

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