F351500

General Info

Members Datasets Scaffolds Average Seq Length
238 203 175 328

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8002745576|8002745701
Length 369
Sequence RPPIKATNMKKHHALQHLLKRLQKQPKTLAPFVSLLLILSVTALITPGFLEIKFVNGHLYGSLIDILHRGTPTALVALGMAVVIGTRGIDLSVGAVIAISGAVTAVLTVNTDWPVWIVIACALGSGLVCGLWNGLLVSIFNIQPIVATLILMVAGRGIAQMITEGQIVTFHSTVLNAIGNEFFLAFPIRVWIVLGMIILTIVVMRKTSLGLFIEAVGANVRASRLVGIEARLLVLSAYMFSGFCAALSGIIIAADIRGADANNAGLWLELDAILAVVLAGASLAGGRIYLGLTIIGVLIIQTLTTAILTSGLPVQYNLVVKATIILAVLLIQSPTTRQWLAKRFQSKRGQNAKKEQNSTSSQNHGRADQ

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2508501050 Microvirga lupini Lut6 Isolate Nodule
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
6 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
7 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
8 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
9 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
10 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
11 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
12 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
13 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
14 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
15 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
16 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
17 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
18 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
19 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
20 2773857925 Microvirga vignae BR3299 Isolate Unclassified
21 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
22 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
23 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
24 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
25 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
26 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
27 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
28 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
29 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
30 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
31 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
32 2851182111 Bosea sp. Tri-44 Isolate Nodule
33 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
34 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
35 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
36 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
37 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
38 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
39 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
40 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
41 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
42 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
43 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
44 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
45 2904504865 Serratia marcescens 1822 Isolate Unclassified
46 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
47 2919150387 Rahnella aceris 1817 Isolate Unclassified
48 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
49 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
50 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
51 2927143783 Rahnella sp. 2050 Isolate Unclassified
52 2932406140 Serratia sp. 2723 Isolate Rhizosphere
53 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
54 2939577877 Serratia sp. 509 Isolate Rhizosphere
55 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
56 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
57 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
58 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
59 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
60 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
61 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
62 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
63 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
64 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
65 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
66 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
67 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
68 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
69 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
70 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
71 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
72 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
73 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
74 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
75 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
76 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
77 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
78 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
79 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
80 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
81 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
82 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
83 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
84 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
85 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
86 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
87 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
88 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
89 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
90 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
91 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
92 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
93 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
94 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
95 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
96 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
97 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
98 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
99 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
100 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
101 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
102 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
103 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
104 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
106 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
111 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
112 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
113 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
116 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
117 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
120 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
122 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
123 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
124 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
126 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
136 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
138 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
139 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
140 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
141 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
142 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
143 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
144 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
145 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
146 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
147 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
148 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
149 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
150 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
151 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
152 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
153 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
154 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
155 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
156 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
157 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
158 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
159 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
160 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
161 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
162 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
163 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
164 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
165 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
166 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
167 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
183 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
184 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
185 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
186 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
187 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
188 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
189 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
190 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
191 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
192 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
193 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
194 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
197 640753048 Serratia proteamaculans 568 Isolate Endosphere
198 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
199 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
200 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
201 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
202 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
203 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 73.53
Metatranscriptomes 0
Isolates 26.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.89
Nodule 6.72
Rhizoplane 2.1
Rhizosphere 42.86
Stem 0
Stem Tuber 1.68
Unclassified 19.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000187 3300002737 Bacteria 65144
2 JGI25158J39367_1000093 3300002739 Bacteria 20714
3 JGI25163J39215_1000048 3300002771 Bacteria 53514
4 JGI25164J39214_1000152 3300002772 Bacteria 65144
5 JGI25152J39213_1004806 3300002773 Bacteria 4139
6 JGI25150J39212_1002595 3300002774 Bacteria 4441
7 JGI25159J45721_1000229 3300002987 Bacteria 26392
8 JGI25159J45721_1002411 3300002987 Bacteria 7109
9 JGI25151J46595_10010747 3300003187 Bacteria 4236
10 JGI25406J46586_10003765 3300003203 Bacteria 7092
11 JGI25153J46596_10008600 3300003215 Bacteria 4859
12 rootH2_10200915 3300003320 Bacteria 1758
13 rootH1_10029357 3300003323 Bacteria 19965
14 JGI25160J50197_1001429 3300003354 Bacteria 11938
15 JGI25160J50197_1032400 3300003354 Bacteria 1329
16 JGI25161J50226_1000180 3300003374 Bacteria 42402
17 Ga0055538_1000109 3300003751 Bacteria 65144
18 Ga0055539_1000158 3300003752 Bacteria 65144
19 Ga0055533_1000160 3300003756 Bacteria 65144
20 Ga0055525_1000212 3300003759 Bacteria 65144
21 Ga0055526_1003369 3300003771 Bacteria 10192
22 Ga0055524_1022588 3300003775 Bacteria 2050
23 Ga0055541_1000104 3300003841 Bacteria 65144
24 Ga0055543_1000255 3300004625 Bacteria 40071
25 Ga0055543_1002006 3300004625 Bacteria 7231
26 Ga0065165_1000240 3300005262 Bacteria 93895
27 Ga0065165_1012268 3300005262 Bacteria 3502
28 Ga0065165_1012458 3300005262 Bacteria 3461
29 Ga0065703_1019040 3300005272 Bacteria 4224
30 Ga0065704_10000036 3300005289 Bacteria 18737
31 Ga0070706_100482085 3300005467 Bacteria 1154
32 Ga0068853_100016370 3300005539 Bacteria 6102
33 Ga0068862_100200649 3300005844 Bacteria 1798
34 Ga0081539_10000945 3300005985 Bacteria 54444
35 Ga0068865_100302498 3300006881 Bacteria 1281
36 Ga0079104_1002520 3300006946 Bacteria 9724
37 Ga0079104_1014555 3300006946 Bacteria 2368
38 Ga0105251_10008797 3300009011 Bacteria 6054
39 Ga0105251_10044865 3300009011 Bacteria 2133
40 Ga0105244_10002492 3300009036 Bacteria 13866
41 Ga0105250_10000049 3300009092 Bacteria 121303
42 Ga0105250_10001309 3300009092 Bacteria 13636
43 Ga0111539_10122137 3300009094 Bacteria 3052
44 Ga0105247_10001354 3300009101 Bacteria 17797
45 Ga0105243_10180888 3300009148 Bacteria 1833
46 Ga0105241_10000320 3300009174 Bacteria 36241
47 Ga0105237_10328541 3300009545 Bacteria 1533
48 Ga0105238_10311735 3300009551 Bacteria 1558
49 Ga0157373_10006155 3300013100 Bacteria 8972
50 Ga0157371_10000102 3300013102 Bacteria 129057
51 Ga0163162_10019808 3300013306 Bacteria 6606
52 Ga0157380_10155075 3300014326 Bacteria 1984
53 Ga0182008_10002805 3300014497 Bacteria 10778
54 Ga0163161_10000375 3300017792 Bacteria 37352
55 Ga0213876_10010407 3300021384 Bacteria 4994
56 Ga0209760_100121 3300025207 Bacteria 53541
57 Ga0209436_100038 3300025208 Bacteria 76733
58 Ga0209784_100064 3300025224 Bacteria 158058
59 Ga0209566_100079 3300025225 Bacteria 158058
60 Ga0209674_100194 3300025226 Bacteria 65330
61 Ga0209563_100152 3300025230 Bacteria 65330
62 Ga0207427_100181 3300025231 Bacteria 65330
63 Ga0209437_100149 3300025233 Bacteria 158058
64 Ga0207425_1003497 3300025245 Bacteria 4999
65 Ga0209677_100148 3300025253 Bacteria 65330
66 Ga0209148_1000908 3300025254 Bacteria 20018
67 Ga0209129_1002857 3300025258 Bacteria 7975
68 Ga0209129_1003460 3300025258 Bacteria 6849
69 Ga0209233_1002319 3300025261 Bacteria 7095
70 Ga0209455_1017102 3300025272 Bacteria 1535
71 Ga0209673_1004105 3300025273 Bacteria 8004
72 Ga0209130_1000061 3300025284 Bacteria 200990
73 Ga0209130_1000097 3300025284 Bacteria 143750
74 Ga0209676_1000093 3300025292 Bacteria 250231
75 Ga0209025_1000436 3300025294 Bacteria 82202
76 Ga0209025_1002244 3300025294 Bacteria 21261
77 Ga0209564_1000721 3300025295 Bacteria 47513
78 Ga0209758_1000505 3300025297 Bacteria 63185
79 Ga0209758_1002302 3300025297 Bacteria 19744
80 Ga0209256_1002298 3300025299 Bacteria 16050
81 Ga0207426_1000003 3300025302 Bacteria 1063212
82 Ga0207426_1000290 3300025302 Bacteria 99519
83 Ga0207426_1003501 3300025302 Bacteria 8457
84 Ga0209051_1014866 3300025303 Bacteria 3612
85 Ga0207696_1000068 3300025711 Bacteria 228017
86 Ga0207696_1000146 3300025711 Bacteria 121312
87 Ga0207696_1000519 3300025711 Bacteria 31968
88 Ga0207655_1000657 3300025728 Bacteria 41098
89 Ga0207713_1000044 3300025735 Bacteria 238074
90 Ga0207713_1000062 3300025735 Bacteria 208832
91 Ga0207710_10000318 3300025900 Bacteria 37014
92 Ga0207654_10000016 3300025911 Bacteria 211550
93 Ga0207669_10201123 3300025937 Bacteria 1446
94 Ga0207674_10054696 3300026116 Bacteria 4063
95 Ga0207683_10174443 3300026121 Bacteria 1948
96 Ga0209281_1000107 3300027111 Bacteria 218397
97 Ga0209281_1010317 3300027111 Bacteria 2145
98 Ga0268265_10033395 3300028380 Bacteria 3740
99 Ga0307513_10098889 3300031456 Bacteria 2947
100 Ga0307408_100000286 3300031548 Bacteria 50236
101 Ga0307405_10088216 3300031731 Bacteria 2046
102 Ga0307413_10085148 3300031824 Bacteria 2040
103 Ga0307406_10000651 3300031901 Bacteria 19678
104 Ga0307407_10294898 3300031903 Bacteria 1128
105 Ga0307409_100253138 3300031995 Bacteria 1611
106 Ga0307416_100162464 3300032002 Bacteria 2066
107 Ga0373946_0126275 3300035171 Bacteria 1173
108 Ga0395905_0030188 3300037471 Bacteria 5109
109 Ga0436365_1457483 3300039437 Bacteria 1855
110 Ga0436365_1478676 3300039437 Bacteria 13109
111 Ga0436360_0605107 3300039438 Bacteria 3831
112 Ga0436362_0673950 3300039453 Bacteria 1522
113 Ga0436362_1029310 3300039453 Bacteria 1687
114 Ga0439461_0009771 3300041410 Bacteria 1747
115 Ga0439465_0001992 3300041413 Bacteria 6708
116 Ga0439465_0002594 3300041413 Bacteria 5885
117 Ga0439445_0014137 3300042004 Bacteria 1940
118 Ga0439432_001669 3300042006 Bacteria 8317
119 Ga0466972_0078277 3300044658 Bacteria 1575
120 Ga0466963_0296406 3300044694 Bacteria 1137
121 Ga0466971_0148180 3300044719 Bacteria 1095
122 Ga0466959_0036645 3300045049 Bacteria 3624
123 Ga0466958_0078099 3300045836 Bacteria 2034
124 Ga0466967_0087276 3300045976 Bacteria 2828
125 Ga0495627_001027 3300046453 Bacteria 18665
126 Ga0495629_0026552 3300046459 Bacteria 4113
127 Ga0495650_0001280 3300046471 Bacteria 25840
128 Ga0495654_0003318 3300046530 Bacteria 9912
129 Ga0495589_0000010 3300046794 Bacteria 250407
130 Ga0495660_0000045 3300046810 Bacteria 150303
131 Ga0495681_0085629 3300047470 Bacteria 1399
132 Ga0496104_0001883 3300048907 Bacteria 18178
133 Ga0496116_0000077 3300048919 Bacteria 227959
134 Ga0496116_0001495 3300048919 Bacteria 26028
135 Ga0496117_0013163 3300048920 Bacteria 7236
136 Ga0496117_0015536 3300048920 Bacteria 6481
137 Ga0496118_0002832 3300048921 Bacteria 22681
138 Ga0496118_0014933 3300048921 Bacteria 7227
139 Ga0496118_0019227 3300048921 Bacteria 6113
140 Ga0496118_0055493 3300048921 Bacteria 2989
141 Ga0496119_0007902 3300048922 Bacteria 9466
142 Ga0496119_0096320 3300048922 Bacteria 1670
143 Ga0496120_0003733 3300048923 Bacteria 13517
144 Ga0496122_0000494 3300048925 Bacteria 81969
145 Ga0496122_0002485 3300048925 Bacteria 26057
146 Ga0496122_0032278 3300048925 Bacteria 4335
147 Ga0496123_0000442 3300048926 Bacteria 74540
148 Ga0496123_0002016 3300048926 Bacteria 26222
149 Ga0496124_0000583 3300048927 Bacteria 61571
150 Ga0496125_0000563 3300048928 Bacteria 63847
151 Ga0496126_0000648 3300048929 Bacteria 64533
152 Ga0496126_0024028 3300048929 Bacteria 5891
153 Ga0501032_0131042 3300049569 Bacteria 1654
154 Ga0501034_0028242 3300049571 Bacteria 5708
155 Ga0501067_0003970 3300049583 Bacteria 8162
156 Ga0501067_0008842 3300049583 Bacteria 5580
157 Ga0501073_0113928 3300049589 Bacteria 1875
158 Ga0501076_0036724 3300049592 Bacteria 3840
159 Ga0501077_0021920 3300049593 Bacteria 4045
160 Ga0501238_003830 3300049671 Bacteria 1861
161 Ga0501083_0005922 3300049744 Bacteria 8653
162 nmdc:mga03683_19818_c2 3300050489 Bacteria 1396
163 nmdc:mga00v17_64292_c1 3300050491 Bacteria 2261
164 nmdc:mga0k408_131659_c1 3300050493 Bacteria 1484
165 Ga0500566_0009539 3300053094 Bacteria 5734
166 Ga0500562_002437 3300053108 Bacteria 4668
167 Ga0500595_000580 3300053119 Bacteria 21802
168 Ga0500559_0032415 3300053136 Bacteria 2246
169 Ga0500638_008522 3300053162 Bacteria 4377
170 Ga0500637_0000303 3300053178 Bacteria 18607
171 Ga0501084_0097593 3300054114 Bacteria 2467
172 Ga0501084_0100520 3300054114 Bacteria 2428
173 Ga0501084_0178128 3300054114 Bacteria 1794
174 Ga0501084_0226073 3300054114 Bacteria 1579
175 Ga0501082_0231450 3300060353 Bacteria 1608

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049583 Ga0501067_0008842 Ga0501067_0008842_1536_2591 281
2 3300054114 Ga0501084_0097593 Ga0501084_0097593_1276_2331 281
3 3300039437 Ga0436365_1457483 Ga0436365_1457483_514_1626 285
4 3300039438 Ga0436360_0605107 Ga0436360_0605107_2555_3601 287
5 3300048925 Ga0496122_0000494 Ga0496122_0000494_67160_68185 287
6 3300048926 Ga0496123_0000442 Ga0496123_0000442_6356_7381 287
7 3300050491 nmdc:mga00v17_64292_c1 nmdc:mga00v17_64292_c1_131_1141 288
8 3300003187 JGI25151J46595_10010747 JGI25151J46595_100107472 289
9 3300025294 Ga0209025_1000436 Ga0209025_100043658 289
10 3300009094 Ga0111539_10122137 Ga0111539_101221373 290
11 3300025294 Ga0209025_1002244 Ga0209025_100224416 291
12 3300039453 Ga0436362_0673950 Ga0436362_0673950_447_1493 293
13 3300009545 Ga0105237_10328541 Ga0105237_103285412 296
14 3300009551 Ga0105238_10311735 Ga0105238_103117352 296
15 3300026116 Ga0207674_10054696 Ga0207674_100546963 296
16 3300044694 Ga0466963_0296406 Ga0466963_0296406_17_997 296
17 3300005539 Ga0068853_100016370 Ga0068853_1000163704 301
18 3300049744 Ga0501083_0005922 Ga0501083_0005922_1955_3010 303
19 3300054114 Ga0501084_0226073 Ga0501084_0226073_476_1531 303
20 3300060353 Ga0501082_0231450 Ga0501082_0231450_522_1577 303
21 3300002773 JGI25152J39213_1004806 JGI25152J39213_10048063 304
22 3300002774 JGI25150J39212_1002595 JGI25150J39212_10025953 304
23 3300003215 JGI25153J46596_10008600 JGI25153J46596_100086002 304
24 3300025245 Ga0207425_1003497 Ga0207425_10034973 304
25 3300025258 Ga0209129_1002857 Ga0209129_10028574 304
26 3300025297 Ga0209758_1002302 Ga0209758_100230216 304
27 3300035171 Ga0373946_0126275 Ga0373946_0126275_132_1145 305
28 3300050489 nmdc:mga03683_19818_c2 nmdc:mga03683_19818_c2_148_1146 305
29 3300025254 Ga0209148_1000908 Ga0209148_10009085 306
30 3300031456 Ga0307513_10098889 Ga0307513_100988892 306
31 3300039453 Ga0436362_1029310 Ga0436362_1029310_408_1391 308
32 3300042004 Ga0439445_0014137 Ga0439445_0014137_953_1891 308
33 3300021384 Ga0213876_10010407 Ga0213876_100104074 309
34 3300039437 Ga0436365_1478676 Ga0436365_1478676_9600_10583 309
35 3300048920 Ga0496117_0015536 Ga0496117_0015536_2484_3482 309
36 3300048925 Ga0496122_0032278 Ga0496122_0032278_1132_2130 309
37 3300053136 Ga0500559_0032415 Ga0500559_0032415_711_1643 309
38 3300003320 rootH2_10200915 rootH2_102009152 310
39 3300003323 rootH1_10029357 rootH1_100293574 310
40 3300031548 Ga0307408_100000286 Ga0307408_10000028623 310
41 3300031901 Ga0307406_10000651 Ga0307406_100006515 310
42 3300049571 Ga0501034_0028242 Ga0501034_0028242_3679_4701 310
43 3300050493 nmdc:mga0k408_131659_c1 nmdc:mga0k408_131659_c1_44_991 310
44 iso_pu_bacteria 2851182111 2851184309 312
45 3300005467 Ga0070706_100482085 Ga0070706_1004820851 313
46 3300044719 Ga0466971_0148180 Ga0466971_0148180_91_1083 314
47 3300053094 Ga0500566_0009539 Ga0500566_0009539_121_1104 314
48 3300053119 Ga0500595_000580 Ga0500595_000580_19517_20500 314
49 3300053162 Ga0500638_008522 Ga0500638_008522_2261_3244 314
50 3300053178 Ga0500637_0000303 Ga0500637_0000303_1236_2219 314
51 iso_pu_bacteria 2512564039 2512730813 314
52 3300003354 JGI25160J50197_1001429 JGI25160J50197_100142911 315
53 3300004625 Ga0055543_1002006 Ga0055543_10020065 315
54 3300005262 Ga0065165_1012458 Ga0065165_10124581 315
55 3300005844 Ga0068862_100200649 Ga0068862_1002006492 315
56 3300006881 Ga0068865_100302498 Ga0068865_1003024982 315
57 3300025302 Ga0207426_1000290 Ga0207426_100029039 315
58 3300025937 Ga0207669_10201123 Ga0207669_102011232 315
59 3300026121 Ga0207683_10174443 Ga0207683_101744432 315
60 3300028380 Ga0268265_10033395 Ga0268265_100333954 315
61 3300037471 Ga0395905_0030188 Ga0395905_0030188_4015_5013 315
62 3300049671 Ga0501238_003830 Ga0501238_003830_266_1258 315
63 3300005272 Ga0065703_1019040 Ga0065703_10190402 316
64 3300006946 Ga0079104_1014555 Ga0079104_10145552 316
65 3300027111 Ga0209281_1010317 Ga0209281_10103172 316
66 3300041413 Ga0439465_0001992 Ga0439465_0001992_3263_4273 316
67 3300041413 Ga0439465_0002594 Ga0439465_0002594_304_1320 316
68 3300046530 Ga0495654_0003318 Ga0495654_0003318_5498_6520 316
69 3300046794 Ga0495589_0000010 Ga0495589_0000010_3322_4344 316
70 3300002739 JGI25158J39367_1000093 JGI25158J39367_100009312 317
71 3300002987 JGI25159J45721_1000229 JGI25159J45721_100022911 317
72 3300003354 JGI25160J50197_1032400 JGI25160J50197_10324002 317
73 3300003374 JGI25161J50226_1000180 JGI25161J50226_100018023 317
74 3300003771 Ga0055526_1003369 Ga0055526_10033692 317
75 3300003775 Ga0055524_1022588 Ga0055524_10225881 317
76 3300004625 Ga0055543_1000255 Ga0055543_10002552 317
77 3300005262 Ga0065165_1012268 Ga0065165_10122682 317
78 3300025208 Ga0209436_100038 Ga0209436_1000385 317
79 3300025258 Ga0209129_1003460 Ga0209129_10034604 317
80 3300025273 Ga0209673_1004105 Ga0209673_10041055 317
81 3300025284 Ga0209130_1000097 Ga0209130_1000097101 317
82 3300025295 Ga0209564_1000721 Ga0209564_100072136 317
83 3300025297 Ga0209758_1000505 Ga0209758_100050522 317
84 3300025299 Ga0209256_1002298 Ga0209256_100229811 317
85 3300025302 Ga0207426_1000003 Ga0207426_1000003765 317
86 3300025303 Ga0209051_1014866 Ga0209051_10148663 317
87 3300046459 Ga0495629_0026552 Ga0495629_0026552_1017_2045 317
88 3300002987 JGI25159J45721_1002411 JGI25159J45721_10024116 318
89 3300005262 Ga0065165_1000240 Ga0065165_10002408 318
90 3300025284 Ga0209130_1000061 Ga0209130_1000061160 318
91 3300025302 Ga0207426_1003501 Ga0207426_10035019 318
92 3300044658 Ga0466972_0078277 Ga0466972_0078277_183_1187 319
93 3300053108 Ga0500562_002437 Ga0500562_002437_2999_3997 320
94 iso_pu_bacteria 2840878972 2840879114 320
95 3300025292 Ga0209676_1000093 Ga0209676_1000093130 321
96 iso_pu_bacteria 2597490356 2599106580 321
97 iso_pu_bacteria 2599185156 2599332208 321
98 iso_pu_bacteria 2842922631 2842924564 321
99 iso_pu_bacteria 2846952575 2846958225 321
100 iso_pu_bacteria 2848858292 2848864707 321
101 iso_pu_bacteria 2919450847 2919453707 321
102 iso_pu_bacteria 8001845381 8001846655 321
103 iso_pu_bacteria 8054558443 8054560885 321
104 3300048929 Ga0496126_0024028 Ga0496126_0024028_3000_4022 322
105 iso_pu_bacteria 2738541276 2738713402 322
106 iso_pu_bacteria 2937843397 2937848455 322
107 iso_pu_bacteria 2989349275 2989352401 322
108 3300009148 Ga0105243_10180888 Ga0105243_101808882 323
109 3300049569 Ga0501032_0131042 Ga0501032_0131042_571_1599 323
110 iso_pu_bacteria 2509276021 2509386950 323
111 iso_pu_bacteria 2510065019 2510133019 323
112 iso_pu_bacteria 2510917030 2511200248 323
113 iso_pu_bacteria 2775507266 2778176492 323
114 iso_pu_bacteria 2889790730 2889790829 323
115 iso_pu_bacteria 2889914905 2889915210 323
116 iso_pu_bacteria 2899803654 2899808899 323
117 iso_pu_bacteria 3005445848 3005447289 323
118 iso_pu_bacteria 8005301065 8005306955 323
119 iso_pu_bacteria 8005688590 8005694873 323
120 3300003203 JGI25406J46586_10003765 JGI25406J46586_100037651 324
121 3300005985 Ga0081539_10000945 Ga0081539_100009452 324
122 3300025272 Ga0209455_1017102 Ga0209455_10171022 324
123 3300045976 Ga0466967_0087276 Ga0466967_0087276_1017_2009 324
124 3300047470 Ga0495681_0085629 Ga0495681_0085629_376_1374 324
125 iso_pu_bacteria 2767802442 2770199559 324
126 iso_pu_bacteria 2775506902 2776272732 324
127 iso_pu_bacteria 2775506904 2776284675 324
128 iso_pu_bacteria 2840764183 2840767186 324
129 iso_pu_bacteria 8057529695 8057535905 324
130 3300041410 Ga0439461_0009771 Ga0439461_0009771_256_1263 325
131 iso_pu_bacteria 2835312727 2835313884 326
132 iso_pu_bacteria 2917554339 2917556446 326
133 iso_pu_bacteria 2565956521 2566038558 327
134 3300014326 Ga0157380_10155075 Ga0157380_101550752 328
135 3300031731 Ga0307405_10088216 Ga0307405_100882162 328
136 3300031824 Ga0307413_10085148 Ga0307413_100851482 328
137 3300031903 Ga0307407_10294898 Ga0307407_102948981 328
138 3300031995 Ga0307409_100253138 Ga0307409_1002531382 328
139 3300032002 Ga0307416_100162464 Ga0307416_1001624641 328
140 iso_pu_bacteria 2506520007 2506580966 328
141 iso_pu_bacteria 2506520008 2506586105 328
142 iso_pu_bacteria 2508501050 2508727225 328
143 iso_pu_bacteria 2508501071 2508854764 328
144 iso_pu_bacteria 2508501114 2509077682 328
145 iso_pu_bacteria 2585427591 2585830135 328
146 iso_pu_bacteria 2654587920 2656276800 328
147 iso_pu_bacteria 2667528173 2671110401 328
148 iso_pu_bacteria 2687453601 2689447516 328
149 iso_pu_bacteria 2773857925 2774871394 328
150 iso_pu_bacteria 2775506901 2776261899 328
151 iso_pu_bacteria 2806310673 2807178866 328
152 iso_pu_bacteria 2852103415 2852104368 328
153 iso_pu_bacteria 2869551831 2869556943 328
154 iso_pu_bacteria 2882456835 2882460198 328
155 iso_pu_bacteria 2894232714 2894233987 328
156 iso_pu_bacteria 2904474040 2904478823 328
157 iso_pu_bacteria 2919150387 2919154931 328
158 iso_pu_bacteria 2923525760 2923528347 328
159 iso_pu_bacteria 2927143783 2927148515 328
160 iso_pu_bacteria 2932406140 2932410765 328
161 iso_pu_bacteria 2939577877 2939582299 328
162 iso_pu_bacteria 2919493220 2919493257 329
163 iso_pu_bacteria 8002745576 8002745701 329
164 3300045049 Ga0466959_0036645 Ga0466959_0036645_873_1916 331
165 3300045836 Ga0466958_0078099 Ga0466958_0078099_104_1147 331
166 3300002737 JGI25162J39368_1000187 JGI25162J39368_10001875 332
167 3300002771 JGI25163J39215_1000048 JGI25163J39215_100004845 332
168 3300002772 JGI25164J39214_1000152 JGI25164J39214_100015259 332
169 3300003751 Ga0055538_1000109 Ga0055538_100010959 332
170 3300003752 Ga0055539_1000158 Ga0055539_10001585 332
171 3300003756 Ga0055533_1000160 Ga0055533_10001605 332
172 3300003759 Ga0055525_1000212 Ga0055525_10002125 332
173 3300003841 Ga0055541_1000104 Ga0055541_10001045 332
174 3300005289 Ga0065704_10000036 Ga0065704_100000366 332
175 3300006946 Ga0079104_1002520 Ga0079104_10025205 332
176 3300009011 Ga0105251_10008797 Ga0105251_100087975 332
177 3300009011 Ga0105251_10044865 Ga0105251_100448652 332
178 3300009036 Ga0105244_10002492 Ga0105244_100024925 332
179 3300009092 Ga0105250_10000049 Ga0105250_100000495 332
180 3300009092 Ga0105250_10001309 Ga0105250_1000130910 332
181 3300009101 Ga0105247_10001354 Ga0105247_1000135414 332
182 3300009174 Ga0105241_10000320 Ga0105241_1000032026 332
183 3300013100 Ga0157373_10006155 Ga0157373_100061557 332
184 3300013102 Ga0157371_10000102 Ga0157371_100001026 332
185 3300013306 Ga0163162_10019808 Ga0163162_100198085 332
186 3300014497 Ga0182008_10002805 Ga0182008_100028056 332
187 3300017792 Ga0163161_10000375 Ga0163161_1000037530 332
188 3300025207 Ga0209760_100121 Ga0209760_1001215 332
189 3300025224 Ga0209784_100064 Ga0209784_100064143 332
190 3300025225 Ga0209566_100079 Ga0209566_100079143 332
191 3300025226 Ga0209674_100194 Ga0209674_1001945 332
192 3300025230 Ga0209563_100152 Ga0209563_1001525 332
193 3300025231 Ga0207427_100181 Ga0207427_1001815 332
194 3300025233 Ga0209437_100149 Ga0209437_100149143 332
195 3300025253 Ga0209677_100148 Ga0209677_10014860 332
196 3300025261 Ga0209233_1002319 Ga0209233_10023192 332
197 3300025711 Ga0207696_1000068 Ga0207696_10000686 332
198 3300025711 Ga0207696_1000146 Ga0207696_10001465 332
199 3300025711 Ga0207696_1000519 Ga0207696_100051925 332
200 3300025728 Ga0207655_1000657 Ga0207655_10006573 332
201 3300025735 Ga0207713_1000044 Ga0207713_10000446 332
202 3300025735 Ga0207713_1000062 Ga0207713_10000626 332
203 3300025900 Ga0207710_10000318 Ga0207710_100003186 332
204 3300025911 Ga0207654_10000016 Ga0207654_100000166 332
205 3300027111 Ga0209281_1000107 Ga0209281_10001076 332
206 3300042006 Ga0439432_001669 Ga0439432_001669_5630_6652 332
207 3300046453 Ga0495627_001027 Ga0495627_001027_3052_4053 332
208 3300046471 Ga0495650_0001280 Ga0495650_0001280_3088_4086 332
209 3300046810 Ga0495660_0000045 Ga0495660_0000045_3238_4236 332
210 3300048907 Ga0496104_0001883 Ga0496104_0001883_3390_4388 332
211 3300048919 Ga0496116_0000077 Ga0496116_0000077_3197_4198 332
212 3300048919 Ga0496116_0001495 Ga0496116_0001495_3238_4236 332
213 3300048920 Ga0496117_0013163 Ga0496117_0013163_2987_3988 332
214 3300048921 Ga0496118_0002832 Ga0496118_0002832_18484_19485 332
215 3300048921 Ga0496118_0014933 Ga0496118_0014933_3238_4236 332
216 3300048921 Ga0496118_0019227 Ga0496118_0019227_3237_4235 332
217 3300048921 Ga0496118_0055493 Ga0496118_0055493_1858_2856 332
218 3300048922 Ga0496119_0007902 Ga0496119_0007902_6842_7840 332
219 3300048922 Ga0496119_0096320 Ga0496119_0096320_192_1193 332
220 3300048923 Ga0496120_0003733 Ga0496120_0003733_11103_12101 332
221 3300048925 Ga0496122_0002485 Ga0496122_0002485_21824_22822 332
222 3300048926 Ga0496123_0002016 Ga0496123_0002016_21808_22806 332
223 3300048927 Ga0496124_0000583 Ga0496124_0000583_57563_58561 332
224 3300048928 Ga0496125_0000563 Ga0496125_0000563_3238_4236 332
225 3300048929 Ga0496126_0000648 Ga0496126_0000648_60119_61117 332
226 3300049583 Ga0501067_0003970 Ga0501067_0003970_5178_6242 332
227 3300049589 Ga0501073_0113928 Ga0501073_0113928_378_1442 332
228 3300049592 Ga0501076_0036724 Ga0501076_0036724_2742_3806 332
229 3300049593 Ga0501077_0021920 Ga0501077_0021920_2002_3066 332
230 3300054114 Ga0501084_0100520 Ga0501084_0100520_877_1941 332
231 3300054114 Ga0501084_0178128 Ga0501084_0178128_25_1089 332
232 iso_pu_bacteria 2537561728 2538425034 332
233 iso_pu_bacteria 2855195626 2855198966 332
234 iso_pu_bacteria 2858466076 2858469193 332
235 iso_pu_bacteria 2871272651 2871275041 332
236 iso_pu_bacteria 2871282230 2871282405 332
237 iso_pu_bacteria 2904504865 2904509430 332
238 iso_pu_bacteria 640753048 640940332 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

62

329

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dbl-assembly1.cif.gz_B crystal structure of e159q mutant of btucdf 0.5645 16 293
2nq2-assembly1.cif.gz_B an inward-facing conformation of a putative metal-chelate type abc transporter. 0.5621 18 318
2nq2-assembly1.cif.gz_B an inward-facing conformation of a putative metal-chelate type abc transporter. 0.5534 18 318
7lb8-assembly1.cif.gz_B structure of a ferrichrome importer fhucdb from e. coli 0.5511 16 295
4g1u-assembly1.cif.gz_B x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.5363 16 297
ID Description Score Start End Superfamily
af_P39328_55_321_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9832 49 314 1.10.3470.10
af_P39328_55_321_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9759 49 314 1.10.3470.10
af_P0AGI1_45_314_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9664 50 314 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9587 51 314 1.10.3470.10
af_P77672_36_301_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9548 50 314 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A7G2IV32-F1-model_v4 Sugar ABC transport system, permease protein YtfT 0.991 17 287 GO:0005886
GO:0022857
AF-A0A1S7MYN8-F1-model_v4 deleted 0.9872 16 301
AF-A0A378AP11-F1-model_v4 Sugar ABC transport system 0.9862 33 282 GO:0005886
GO:0022857
AF-A0A7G2IV32-F1-model_v4 Sugar ABC transport system, permease protein YtfT 0.9802 17 287 GO:0005886
GO:0022857
AF-A0A077ZI57-F1-model_v4 BPD transp 2 domain containing protein 0.9801 17 299 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
80.56 0.82 High
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Predicted Structure (AlphaFold2)

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