F351429

General Info

Members Datasets Scaffolds Average Seq Length
238 180 476 337

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0004926|Ga0500616_0004926_1478_2674
Length 398
Sequence MKRALISGITGQDGSYLLEHLLAEGYEVHGIVRRASSFNRSRIEHLRTDPDIYDKLLFLHYSDLTDGTSLRRIFRKVAPREYYHLAGQSHVGLSFEIPESTCAESGMAILNILEICRDLDNPPRIFHAGSSEVFGSSPETAAQNEDSPFRPVTPYGCAKAFAANLCRVYRESYGLYISNGIMFNHESPRRGENFVTKKIASAAGRIAAGSPEVLELGNLETTRDWGYAPEFVRAMRIMLNLPKPDDFVLGSGTSMSVREFAIEVFATLGMQIAFEGTGLREQARDVRTGRTVINVHPRFYRSFDPSCLQAGIAKAKAVLGWNPTVTGRSLAELMALAEYKMGMQEAGKLAAQDHAGADSKILIPAKPARPSTRRPSTSILNDDDPSLHPLLEKAAPAL

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300003479 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_06_lowP_mix1_d1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003556 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_09_fullP_nobac_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003558 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_10_fullP_mix1_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003560 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_13_lowP_nobac_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003561 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_01_fullP_nobac_d1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003564 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_05_lowP_nobac_d1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003565 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_16_lowP_mix3_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003567 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_04_fullP_mix3_d1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
75 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
116 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
120 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
121 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
122 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
123 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
127 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
171 2517572101 Frankia sp. DC12 Isolate Nodule
172 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
173 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
174 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
175 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
176 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
177 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
178 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
179 8002784119 Frankia sp. AgB1.9 Isolate Nodule
180 8054704163 Micromonospora trifolii NIE79 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.24
Metatranscriptomes 7.56
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.1
Nodule 1.26
Rhizoplane 1.26
Rhizosphere 88.24
Stem 0
Stem Tuber 0
Unclassified 1.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0004926 3300053153 Bacteria 9274
2 Ga0006556J51387_1002282 3300003479 Eukaryota 1779
3 Ga0006556J51387_1005115 3300003479 Eukaryota 1460
4 Ga0006557J51388_1005687 3300003556 Eukaryota 1495
5 Ga0006557J51388_1008739 3300003556 Eukaryota 2515
6 Ga0006557J51388_1008740 3300003556 Eukaryota 1410
7 Ga0006558J51389_1005440 3300003558 Eukaryota 1469
8 Ga0006558J51389_1013706 3300003558 Eukaryota 1370
9 Ga0006559J51393_1003897 3300003560 Eukaryota 1416
10 Ga0006559J51393_1009525 3300003560 Eukaryota 1360
11 Ga0006553J51392_1003339 3300003561 Eukaryota 1552
12 Ga0006553J51392_1008347 3300003561 Eukaryota 1380
13 Ga0006555J51386_1003177 3300003564 Eukaryota 1505
14 Ga0006555J51386_1007057 3300003564 Eukaryota 1400
15 Ga0006560J51390_1002458 3300003565 Eukaryota 1518
16 Ga0006560J51390_1004543 3300003565 Eukaryota 1410
17 Ga0006554J51385_1004401 3300003567 Eukaryota 1486
18 Ga0006554J51385_1009460 3300003567 Eukaryota 2299
19 Ga0006554J51385_1009462 3300003567 Eukaryota 1395
20 Ga0055536_1017897 3300003781 Bacteria 2295
21 Ga0070658_10025324 3300005327 Bacteria 4757
22 Ga0070683_100007540 3300005329 Bacteria 9197
23 Ga0070683_100258170 3300005329 Bacteria 1657
24 Ga0070683_100333193 3300005329 Bacteria 1445
25 Ga0070690_100081518 3300005330 Bacteria 2117
26 Ga0068869_100160148 3300005334 Bacteria 1752
27 Ga0070666_10016955 3300005335 Bacteria 4664
28 Ga0070666_10136095 3300005335 Bacteria 1709
29 Ga0070691_10017226 3300005341 Bacteria 3325
30 Ga0070671_100034768 3300005355 Bacteria 4173
31 Ga0070674_100000526 3300005356 Bacteria 19280
32 Ga0070673_100070182 3300005364 Bacteria 2811
33 Ga0070673_100232056 3300005364 Bacteria 1601
34 Ga0070659_100021376 3300005366 Bacteria 4928
35 Ga0070667_100014375 3300005367 Bacteria 6541
36 Ga0070700_100034672 3300005441 Bacteria 3049
37 Ga0070700_100107380 3300005441 Bacteria 1850
38 Ga0070663_100033832 3300005455 Bacteria 3534
39 Ga0070678_100013578 3300005456 Bacteria 5114
40 Ga0070662_100000217 3300005457 Bacteria 33754
41 Ga0068867_100000638 3300005459 Bacteria 23155
42 Ga0070706_100255182 3300005467 Bacteria 1637
43 Ga0070699_100022451 3300005518 Bacteria 5438
44 Ga0070679_100200815 3300005530 Bacteria 1960
45 Ga0070684_100010237 3300005535 Bacteria 7423
46 Ga0068853_100053855 3300005539 Bacteria 3466
47 Ga0070695_100009126 3300005545 Bacteria 5895
48 Ga0070696_100004994 3300005546 Bacteria 8862
49 Ga0070693_100010764 3300005547 Bacteria 4589
50 Ga0070693_100011489 3300005547 Bacteria 4461
51 Ga0068855_100005006 3300005563 Bacteria 16169
52 Ga0070664_100107834 3300005564 Bacteria 2428
53 Ga0068857_100036516 3300005577 Bacteria 4354
54 Ga0068857_100245718 3300005577 Bacteria 1639
55 Ga0070702_100012349 3300005615 Bacteria 4276
56 Ga0070702_100071696 3300005615 Bacteria 2048
57 Ga0068859_100001770 3300005617 Bacteria 21973
58 Ga0068864_100001380 3300005618 Bacteria 20130
59 Ga0068866_10000698 3300005718 Bacteria 15259
60 Ga0068866_10109333 3300005718 Bacteria 1539
61 Ga0068861_100142236 3300005719 Bacteria 1959
62 Ga0068870_10079233 3300005840 Bacteria 1811
63 Ga0068863_100008439 3300005841 Bacteria 10062
64 Ga0068858_100154497 3300005842 Bacteria 2159
65 Ga0068860_100504203 3300005843 Bacteria 1208
66 Ga0068862_100068045 3300005844 Bacteria 3071
67 Ga0097621_100039127 3300006237 Bacteria 3808
68 Ga0075428_100063036 3300006844 Bacteria 4058
69 Ga0068865_100066423 3300006881 Bacteria 2544
70 Ga0075436_100000001 3300006914 Bacteria 622380
71 Ga0075436_100007856 3300006914 Bacteria 7298
72 Ga0075436_100133599 3300006914 Bacteria 1741
73 Ga0097620_100001770 3300006931 Bacteria 21973
74 Ga0105240_10003091 3300009093 Bacteria 26176
75 Ga0105240_10058479 3300009093 Bacteria 4813
76 Ga0105240_10174536 3300009093 Bacteria 2542
77 Ga0111539_10245862 3300009094 Bacteria 2083
78 Ga0111539_10609521 3300009094 Bacteria 1271
79 Ga0105245_10313126 3300009098 Bacteria 1544
80 Ga0114129_10145975 3300009147 Bacteria 3241
81 Ga0105243_10002469 3300009148 Bacteria 15442
82 Ga0105241_10005520 3300009174 Bacteria 9343
83 Ga0105242_10001657 3300009176 Bacteria 17603
84 Ga0105248_10000398 3300009177 Bacteria 50347
85 Ga0105248_10005457 3300009177 Bacteria 13976
86 Ga0105238_10000555 3300009551 Bacteria 39053
87 Ga0105238_10085704 3300009551 Bacteria 3138
88 Ga0105238_10180768 3300009551 Bacteria 2086
89 Ga0105249_10095243 3300009553 Bacteria 2791
90 Ga0105239_10125950 3300010375 Bacteria 2847
91 Ga0105239_10385978 3300010375 Bacteria 1584
92 Ga0105246_10439119 3300011119 Bacteria 1094
93 Ga0157374_10498786 3300013296 Bacteria 1222
94 Ga0157378_10052463 3300013297 Bacteria 3628
95 Ga0163162_10239507 3300013306 Bacteria 1945
96 Ga0157372_10003147 3300013307 Bacteria 17795
97 Ga0157375_10000041 3300013308 Bacteria 162765
98 Ga0157375_10109489 3300013308 Bacteria 2859
99 Ga0157375_10358090 3300013308 Bacteria 1625
100 Ga0163163_10125823 3300014325 Bacteria 2601
101 Ga0157380_10046735 3300014326 Bacteria 3402
102 Ga0157380_10081945 3300014326 Bacteria 2640
103 Ga0157379_10032530 3300014968 Bacteria 4650
104 Ga0163161_10141527 3300017792 Bacteria 1822
105 Ga0213871_10026485 3300021441 Bacteria 1484
106 Ga0209676_1000026 3300025292 Bacteria 574599
107 Ga0209050_1011429 3300025298 Bacteria 4211
108 Ga0207682_10072957 3300025893 Bacteria 1457
109 Ga0207642_10001855 3300025899 Bacteria 6520
110 Ga0207680_10017292 3300025903 Bacteria 3807
111 Ga0207645_10001158 3300025907 Bacteria 21801
112 Ga0207705_10060543 3300025909 Bacteria 2734
113 Ga0207654_10025957 3300025911 Bacteria 3167
114 Ga0207707_10025120 3300025912 Bacteria 5211
115 Ga0207707_10042377 3300025912 Bacteria 3972
116 Ga0207695_10011761 3300025913 Bacteria 10572
117 Ga0207695_10066703 3300025913 Bacteria 3694
118 Ga0207681_10046741 3300025923 Bacteria 2912
119 Ga0207694_10012118 3300025924 Bacteria 6503
120 Ga0207659_10144211 3300025926 Bacteria 1852
121 Ga0207659_10312394 3300025926 Unclassified 1294
122 Ga0207687_10074465 3300025927 Bacteria 2434
123 Ga0207644_10389865 3300025931 Bacteria 1137
124 Ga0207690_10081775 3300025932 Bacteria 2258
125 Ga0207706_10000244 3300025933 Bacteria 59754
126 Ga0207686_10000150 3300025934 Bacteria 53141
127 Ga0207686_10008283 3300025934 Bacteria 5609
128 Ga0207709_10004929 3300025935 Bacteria 7639
129 Ga0207669_10001118 3300025937 Bacteria 11490
130 Ga0207704_10018081 3300025938 Bacteria 3671
131 Ga0207665_10111456 3300025939 Unclassified 1923
132 Ga0207711_10001777 3300025941 Bacteria 19738
133 Ga0207711_10025194 3300025941 Bacteria 4991
134 Ga0207689_10003755 3300025942 Bacteria 13836
135 Ga0207667_10117927 3300025949 Bacteria 2735
136 Ga0207651_10010974 3300025960 Bacteria 5047
137 Ga0207651_10108549 3300025960 Bacteria 2077
138 Ga0207651_10367572 3300025960 Viruses 1216
139 Ga0207712_10001581 3300025961 Bacteria 15325
140 Ga0207658_10010698 3300025986 Bacteria 6236
141 Ga0207703_10123275 3300026035 Bacteria 2228
142 Ga0207639_10020924 3300026041 Bacteria 4693
143 Ga0207678_10029228 3300026067 Bacteria 4809
144 Ga0207678_10050013 3300026067 Bacteria 3611
145 Ga0207708_10040125 3300026075 Bacteria 3568
146 Ga0207708_10045510 3300026075 Bacteria 3344
147 Ga0207641_10008894 3300026088 Bacteria 8293
148 Ga0207648_10000273 3300026089 Bacteria 56070
149 Ga0207676_10004786 3300026095 Bacteria 9603
150 Ga0207674_10121007 3300026116 Bacteria 2585
151 Ga0207674_10278518 3300026116 Bacteria 1620
152 Ga0207675_100072515 3300026118 Bacteria 3221
153 Ga0207675_100207856 3300026118 Bacteria 1882
154 Ga0207683_10008583 3300026121 Bacteria 8745
155 Ga0207698_10082792 3300026142 Bacteria 2595
156 Ga0268264_10016208 3300028381 Bacteria 6101
157 Ga0265318_10028825 3300028577 Bacteria 2168
158 Ga0265338_10144636 3300028800 Bacteria 1857
159 Ga0265327_10009642 3300031251 Bacteria 6932
160 Ga0265327_10034776 3300031251 Bacteria 2793
161 Ga0307516_10129784 3300031730 Bacteria 2301
162 Ga0316577_10002464 3300031733 Bacteria 9180
163 Ga0316585_10038972 3300032137 Bacteria 1510
164 Ga0373950_0000301 3300034818 Bacteria 6219
165 Ga0373934_0031850 3300035086 Bacteria 2066
166 Ga0373954_0020133 3300035118 Bacteria 3016
167 Ga0373927_0002076 3300035695 Bacteria 14800
168 Ga0373937_0094542 3300036401 Bacteria 2772
169 Ga0316582_0156347 3300036647 Bacteria 1543
170 Ga0316584_0078093 3300036712 Bacteria 2479
171 Ga0373925_0040230 3300037068 Bacteria 3461
172 Ga0395899_0011936 3300037312 Bacteria 6656
173 Ga0395900_0002528 3300037418 Bacteria 20031
174 Ga0395900_0212161 3300037418 Bacteria 1955
175 Ga0395898_0120951 3300037466 Bacteria 2508
176 Ga0436364_0228312 3300037853 Bacteria 4904
177 Ga0436364_0776611 3300037853 Unclassified 3821
178 Ga0436364_0892515 3300037853 Bacteria 3672
179 Ga0395901_0002359 3300038443 Bacteria 19205
180 Ga0436365_1707714 3300039437 Bacteria 1115
181 Ga0436360_0164803 3300039438 Bacteria 2258
182 Ga0451577_0000031 3300042876 Bacteria 388524
183 Ga0451577_0083706 3300042876 Bacteria 2846
184 Ga0451577_0171223 3300042876 Bacteria 1957
185 Ga0453683_0034610 3300044673 Bacteria 3185
186 Ga0453684_0000059 3300044712 Bacteria 501337
187 Ga0453684_0039484 3300044712 Bacteria 6431
188 Ga0451576_0011372 3300045051 Bacteria 10121
189 Ga0451576_0024029 3300045051 Bacteria 6587
190 Ga0451576_0177424 3300045051 Bacteria 2224
191 Ga0451576_0182365 3300045051 Bacteria 2192
192 Ga0451576_0185468 3300045051 Bacteria 2172
193 Ga0466967_0208684 3300045976 Bacteria 1852
194 Ga0495603_0070439 3300046455 Bacteria 2055
195 Ga0495580_0147009 3300046472 Bacteria 1633
196 Ga0495580_0322468 3300046472 Bacteria 1050
197 Ga0495585_0037729 3300046492 Bacteria 2721
198 Ga0495635_0192258 3300046663 Unclassified 1385
199 Ga0495602_0128717 3300048088 Bacteria 2023
200 Ga0496109_0442500 3300048912 Bacteria 1228
201 Ga0496112_0323229 3300048915 Bacteria 1487
202 Ga0496114_0035767 3300048917 Bacteria 4102
203 Ga0496116_0000109 3300048919 Bacteria 185809
204 Ga0496117_0019352 3300048920 Bacteria 5597
205 Ga0496118_0001403 3300048921 Bacteria 36289
206 Ga0496119_0012481 3300048922 Bacteria 6894
207 Ga0496121_0069699 3300048924 Bacteria 2836
208 Ga0501032_0144330 3300049569 Bacteria 1567
209 Ga0501038_0176033 3300049574 Bacteria 1729
210 Ga0501043_0135865 3300049579 Bacteria 1926
211 Ga0501047_0103759 3300049581 Bacteria 2724
212 Ga0501070_0184274 3300049586 Bacteria 1717
213 Ga0501071_0251603 3300049587 Bacteria 1334
214 Ga0501073_0055065 3300049589 Bacteria 2784
215 Ga0501074_0094589 3300049590 Bacteria 2140
216 Ga0501080_0413341 3300049742 Bacteria 1213
217 Ga0501081_0012952 3300049743 Bacteria 5486
218 Ga0501081_0282842 3300049743 Bacteria 1215
219 Ga0501035_0024187 3300049822 Bacteria 5572
220 Ga0501035_0071131 3300049822 Bacteria 3081
221 Ga0501044_0000661 3300049823 Bacteria 41649
222 Ga0501044_0001347 3300049823 Bacteria 28886
223 Ga0501044_0025068 3300049823 Bacteria 6325
224 nmdc:mga05p37_225250_c1 3300050507 Bacteria 2261
225 nmdc:mga08y16_187839_c1 3300050511 Bacteria 2144
226 nmdc:mga08x19_1_c1 3300050514 Bacteria 2010344
227 nmdc:mga0a205_150578_c1 3300050515 Bacteria 2226
228 Ga0500644_0118031 3300053088 Bacteria 1031
229 2517761416 2517572101 Bacteria 6884336
230 2772644497 2772190715 Bacteria 6959372
231 2832005893 2832004796 Bacteria 6538017
232 2855678330 2855676851 Bacteria 7063653
233 2858855002 2858848962 Bacteria 6963058
234 2858889250 2858888857 Bacteria 7060307
235 2866071213 2866065130 Bacteria 6518152
236 2869054878 2869048445 Bacteria 6875584
237 8002786349 8002784119 Bacteria 9788632
238 8054707386 8054704163 Bacteria 7247792
239 Ga0500616_0004926
240 Ga0006556J51387_1002282
241 Ga0006556J51387_1005115
242 Ga0006557J51388_1005687
243 Ga0006557J51388_1008739
244 Ga0006557J51388_1008740
245 Ga0006558J51389_1005440
246 Ga0006558J51389_1013706
247 Ga0006559J51393_1003897
248 Ga0006559J51393_1009525
249 Ga0006553J51392_1003339
250 Ga0006553J51392_1008347
251 Ga0006555J51386_1003177
252 Ga0006555J51386_1007057
253 Ga0006560J51390_1002458
254 Ga0006560J51390_1004543
255 Ga0006554J51385_1004401
256 Ga0006554J51385_1009460
257 Ga0006554J51385_1009462
258 Ga0055536_1017897
259 Ga0070658_10025324
260 Ga0070683_100007540
261 Ga0070683_100258170
262 Ga0070683_100333193
263 Ga0070690_100081518
264 Ga0068869_100160148
265 Ga0070666_10016955
266 Ga0070666_10136095
267 Ga0070691_10017226
268 Ga0070671_100034768
269 Ga0070674_100000526
270 Ga0070673_100070182
271 Ga0070673_100232056
272 Ga0070659_100021376
273 Ga0070667_100014375
274 Ga0070700_100034672
275 Ga0070700_100107380
276 Ga0070663_100033832
277 Ga0070678_100013578
278 Ga0070662_100000217
279 Ga0068867_100000638
280 Ga0070706_100255182
281 Ga0070699_100022451
282 Ga0070679_100200815
283 Ga0070684_100010237
284 Ga0068853_100053855
285 Ga0070695_100009126
286 Ga0070696_100004994
287 Ga0070693_100010764
288 Ga0070693_100011489
289 Ga0068855_100005006
290 Ga0070664_100107834
291 Ga0068857_100036516
292 Ga0068857_100245718
293 Ga0070702_100012349
294 Ga0070702_100071696
295 Ga0068859_100001770
296 Ga0068864_100001380
297 Ga0068866_10000698
298 Ga0068866_10109333
299 Ga0068861_100142236
300 Ga0068870_10079233
301 Ga0068863_100008439
302 Ga0068858_100154497
303 Ga0068860_100504203
304 Ga0068862_100068045
305 Ga0097621_100039127
306 Ga0075428_100063036
307 Ga0068865_100066423
308 Ga0075436_100000001
309 Ga0075436_100007856
310 Ga0075436_100133599
311 Ga0097620_100001770
312 Ga0105240_10003091
313 Ga0105240_10058479
314 Ga0105240_10174536
315 Ga0111539_10245862
316 Ga0111539_10609521
317 Ga0105245_10313126
318 Ga0114129_10145975
319 Ga0105243_10002469
320 Ga0105241_10005520
321 Ga0105242_10001657
322 Ga0105248_10000398
323 Ga0105248_10005457
324 Ga0105238_10000555
325 Ga0105238_10085704
326 Ga0105238_10180768
327 Ga0105249_10095243
328 Ga0105239_10125950
329 Ga0105239_10385978
330 Ga0105246_10439119
331 Ga0157374_10498786
332 Ga0157378_10052463
333 Ga0163162_10239507
334 Ga0157372_10003147
335 Ga0157375_10000041
336 Ga0157375_10109489
337 Ga0157375_10358090
338 Ga0163163_10125823
339 Ga0157380_10046735
340 Ga0157380_10081945
341 Ga0157379_10032530
342 Ga0163161_10141527
343 Ga0213871_10026485
344 Ga0209676_1000026
345 Ga0209050_1011429
346 Ga0207682_10072957
347 Ga0207642_10001855
348 Ga0207680_10017292
349 Ga0207645_10001158
350 Ga0207705_10060543
351 Ga0207654_10025957
352 Ga0207707_10025120
353 Ga0207707_10042377
354 Ga0207695_10011761
355 Ga0207695_10066703
356 Ga0207681_10046741
357 Ga0207694_10012118
358 Ga0207659_10144211
359 Ga0207659_10312394
360 Ga0207687_10074465
361 Ga0207644_10389865
362 Ga0207690_10081775
363 Ga0207706_10000244
364 Ga0207686_10000150
365 Ga0207686_10008283
366 Ga0207709_10004929
367 Ga0207669_10001118
368 Ga0207704_10018081
369 Ga0207665_10111456
370 Ga0207711_10001777
371 Ga0207711_10025194
372 Ga0207689_10003755
373 Ga0207667_10117927
374 Ga0207651_10010974
375 Ga0207651_10108549
376 Ga0207651_10367572
377 Ga0207712_10001581
378 Ga0207658_10010698
379 Ga0207703_10123275
380 Ga0207639_10020924
381 Ga0207678_10029228
382 Ga0207678_10050013
383 Ga0207708_10040125
384 Ga0207708_10045510
385 Ga0207641_10008894
386 Ga0207648_10000273
387 Ga0207676_10004786
388 Ga0207674_10121007
389 Ga0207674_10278518
390 Ga0207675_100072515
391 Ga0207675_100207856
392 Ga0207683_10008583
393 Ga0207698_10082792
394 Ga0268264_10016208
395 Ga0265318_10028825
396 Ga0265338_10144636
397 Ga0265327_10009642
398 Ga0265327_10034776
399 Ga0307516_10129784
400 Ga0316577_10002464
401 Ga0316585_10038972
402 Ga0373950_0000301
403 Ga0373934_0031850
404 Ga0373954_0020133
405 Ga0373927_0002076
406 Ga0373937_0094542
407 Ga0316582_0156347
408 Ga0316584_0078093
409 Ga0373925_0040230
410 Ga0395899_0011936
411 Ga0395900_0002528
412 Ga0395900_0212161
413 Ga0395898_0120951
414 Ga0436364_0228312
415 Ga0436364_0776611
416 Ga0436364_0892515
417 Ga0395901_0002359
418 Ga0436365_1707714
419 Ga0436360_0164803
420 Ga0451577_0000031
421 Ga0451577_0083706
422 Ga0451577_0171223
423 Ga0453683_0034610
424 Ga0453684_0000059
425 Ga0453684_0039484
426 Ga0451576_0011372
427 Ga0451576_0024029
428 Ga0451576_0177424
429 Ga0451576_0182365
430 Ga0451576_0185468
431 Ga0466967_0208684
432 Ga0495603_0070439
433 Ga0495580_0147009
434 Ga0495580_0322468
435 Ga0495585_0037729
436 Ga0495635_0192258
437 Ga0495602_0128717
438 Ga0496109_0442500
439 Ga0496112_0323229
440 Ga0496114_0035767
441 Ga0496116_0000109
442 Ga0496117_0019352
443 Ga0496118_0001403
444 Ga0496119_0012481
445 Ga0496121_0069699
446 Ga0501032_0144330
447 Ga0501038_0176033
448 Ga0501043_0135865
449 Ga0501047_0103759
450 Ga0501070_0184274
451 Ga0501071_0251603
452 Ga0501073_0055065
453 Ga0501074_0094589
454 Ga0501080_0413341
455 Ga0501081_0012952
456 Ga0501081_0282842
457 Ga0501035_0024187
458 Ga0501035_0071131
459 Ga0501044_0000661
460 Ga0501044_0001347
461 Ga0501044_0025068
462 nmdc:mga05p37_225250_c1
463 nmdc:mga08y16_187839_c1
464 nmdc:mga08x19_1_c1
465 nmdc:mga0a205_150578_c1
466 Ga0500644_0118031
467 2517761416
468 2772644497
469 2832005893
470 2855678330
471 2858855002
472 2858889250
473 2866071213
474 2869054878
475 8002786349
476 8054707386

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

5

334

0.98

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

4

250

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1n7h-assembly1.cif.gz_A-2 crystal structure of gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp 0.9953 28 366
1n7h-assembly1.cif.gz_B-2 crystal structure of gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp 0.9952 28 367
1n7g-assembly1.cif.gz_A crystal structure of the gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp-rhamnose. 0.9924 28 367
1n7h-assembly1.cif.gz_B-2 crystal structure of gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp 0.9923 28 367
1n7h-assembly1.cif.gz_A-2 crystal structure of gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp 0.9923 28 366
ID Description Score Start End Superfamily
1n7gB01 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.983 221 367 3.90.25.10
1n7gB01 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9734 221 367 3.90.25.10
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9659 29 297 3.40.50.720
af_Q4D941_50_182_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9622 221 334 3.90.25.10
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9588 29 297 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A660VXX7-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 1.002 220 365 GO:0008446
GO:0042351
AF-L8NVN8-F1-model_v4 deleted 0.9939 107 356
AF-A0A6P0Z341-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9938 87 356 GO:0008446
GO:0042351
AF-A0A287VKI9-F1-model_v4 deleted 0.9935 187 297
AF-A0A146LA67-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) 0.9901 153 301 GO:0008446
GO:0042351

Map