F351393

General Info

Members Datasets Scaffolds Average Seq Length
238 197 160 303

Family's Representative Sequence

Representative Sequence 3300050492|nmdc:mga0yw44_2777_c1|nmdc:mga0yw44_2777_c1_2264_3244
Length 326
Sequence MAFNESYRRQVALLLRTMPFIAQEGSFALKGGTAINLFVRDLPRLSVDIDLTYLPLLPRARALGAIDKAMQRIAGRIDKAIRGARITRANTEGAVTKLFVRDAVVQIKIEVTPVMRGCAYATELRGVSPAVEAAFGFAEMKVLSFADLYAGKIVAAFDRQHPRDLFDVRDLLANEGIDDRLRAAFIVYLLSHNRPMAEVLAVRPKDIAAEFVAGFQGMTAEPVTVEELIAARAALVDRIVTNMPQPHRRFLVSFESGAPDWTLLGVPRADRLPAVKWRQQNLAKLTRNKRIALVAQLEAVLQQPTTASQLTLFAEPGAPKPKRRKR

Samples

Sample ID Description Type Environment
1 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
2 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
3 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
4 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
5 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
6 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
7 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
8 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
9 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
10 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
11 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
12 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
13 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
14 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
15 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
16 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
17 2643221557 Ensifer sp. Root558 Isolate Unclassified
18 2643221580 Devosia sp. Root635 Isolate Unclassified
19 2643221610 Ensifer sp. Root74 Isolate Unclassified
20 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
21 2643221668 Ensifer sp. Root423 Isolate Unclassified
22 2643221675 Ensifer sp. Root1298 Isolate Unclassified
23 2643221680 Ensifer sp. Root1312 Isolate Unclassified
24 2643221688 Rhizobium sp. Root482 Isolate Unclassified
25 2643221726 Ensifer sp. Root954 Isolate Unclassified
26 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
27 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
28 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
29 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
30 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
31 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
32 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
33 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
34 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
35 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
36 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
37 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
38 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
39 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
40 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
41 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
42 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
43 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
44 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
45 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
46 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
47 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
48 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
49 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
50 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
51 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
52 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
53 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
54 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
55 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
56 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
57 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
58 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
59 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
60 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
61 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
62 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
63 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
64 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
65 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
66 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
67 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
68 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
69 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
70 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
71 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
72 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
73 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
74 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
75 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
76 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
77 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
78 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
79 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
80 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
81 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
82 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
83 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
84 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
85 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
91 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
97 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
103 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
109 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
110 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
111 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
112 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
113 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
114 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
115 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
116 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
117 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
124 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
125 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
126 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
127 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
128 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
129 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
130 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
133 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
137 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
145 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
153 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
166 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
167 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
168 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
169 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
170 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
172 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
173 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
176 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
177 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
178 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
181 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
182 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
183 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
187 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
188 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
189 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
190 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
191 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
192 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
193 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
194 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
195 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
196 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
197 8056382006 Rhizobium croatiense 13T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 67.23
Metatranscriptomes 0
Isolates 32.77

Biome Distribution

Category Percentage (%)
Aerial Root 0.42
Bulb 0
Endosphere 17.23
Nodule 20.17
Rhizoplane 1.26
Rhizosphere 41.6
Stem 0
Stem Tuber 0
Unclassified 19.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1014870 3300002987 Bacteria 1732
2 rootH2_10002275 3300003320 Bacteria 16230
3 rootH1_10029221 3300003323 Bacteria 5430
4 JGI25160J50197_1000332 3300003354 Bacteria 32129
5 JGI25161J50226_1000252 3300003374 Bacteria 32150
6 Ga0055524_1001298 3300003775 Bacteria 14638
7 Ga0055524_1006060 3300003775 Bacteria 5298
8 Ga0055528_1000018 3300003790 Bacteria 155302
9 Ga0055543_1000196 3300004625 Bacteria 49469
10 Ga0065165_1001098 3300005262 Bacteria 32167
11 Ga0070681_10005771 3300005458 Bacteria 11970
12 Ga0070681_10047707 3300005458 Bacteria 4282
13 Ga0068853_100184620 3300005539 Bacteria 1892
14 Ga0070665_100112332 3300005548 Bacteria 2727
15 Ga0068860_100000058 3300005843 Bacteria 197181
16 Ga0081539_10003035 3300005985 Bacteria 21755
17 Ga0075369_10005921 3300006186 Bacteria 4598
18 Ga0079104_1000560 3300006946 Bacteria 38098
19 Ga0099794_10199891 3300007265 Bacteria 1023
20 Ga0105241_10083208 3300009174 Bacteria 2510
21 Ga0105246_10215399 3300011119 Bacteria 1502
22 Ga0171462_1063 3300013250 Bacteria 15657
23 Ga0214544_1000475 3300021320 Bacteria 73137
24 Ga0214542_1000584 3300021321 Bacteria 67311
25 Ga0214543_1000453 3300021327 Bacteria 68014
26 Ga0213875_10001153 3300021388 Bacteria 18129
27 Ga0209436_115218 3300025208 Bacteria 1197
28 Ga0209677_102529 3300025253 Bacteria 6778
29 Ga0209673_1000055 3300025273 Bacteria 272768
30 Ga0209130_1000394 3300025284 Bacteria 47757
31 Ga0209564_1009534 3300025295 Bacteria 4605
32 Ga0209758_1000799 3300025297 Bacteria 44659
33 Ga0209758_1019766 3300025297 Bacteria 3227
34 Ga0209256_1000089 3300025299 Bacteria 214426
35 Ga0209256_1000147 3300025299 Bacteria 149002
36 Ga0207426_1000416 3300025302 Bacteria 70230
37 Ga0207707_10004450 3300025912 Bacteria 12347
38 Ga0268266_10114555 3300028379 Bacteria 2392
39 Ga0268264_10000022 3300028381 Bacteria 476624
40 Ga0265337_1000089 3300028556 Bacteria 44667
41 Ga0265334_10001977 3300028573 Bacteria 9742
42 Ga0265338_10008439 3300028800 Bacteria 12508
43 Ga0265340_10095952 3300031247 Bacteria 1382
44 Ga0265339_10040365 3300031249 Bacteria 2594
45 Ga0265313_10027336 3300031595 Bacteria 2988
46 Ga0307516_10001045 3300031730 Bacteria 38473
47 Ga0307516_10157542 3300031730 Bacteria 2024
48 Ga0316582_0323800 3300036647 Unclassified 1060
49 Ga0395905_0003569 3300037471 Bacteria 16568
50 Ga0436364_1399463 3300037853 Bacteria 10872
51 Ga0400483_181568 3300039062 Bacteria 1573
52 Ga0436361_1133716 3300039447 Plasmid 2754
53 Ga0451833_0267764 3300041491 Bacteria 1855
54 Ga0451835_0255525 3300041492 Bacteria 4652
55 Ga0451837_0373913 3300041494 Bacteria 7187
56 Ga0451839_0776885 3300041496 Bacteria 7352
57 Ga0451841_0426999 3300041498 Bacteria 4880
58 Ga0451845_0357455 3300041501 Bacteria 1919
59 Ga0451845_0374388 3300041501 Bacteria 5792
60 Ga0451847_0485613 3300041503 Bacteria 1984
61 Ga0451849_0941713 3300041505 Bacteria 3629
62 Ga0451851_1056227 3300041507 Bacteria 1502
63 Ga0451851_1291670 3300041507 Bacteria 1479
64 Ga0451855_0308928 3300041511 Bacteria 4548
65 Ga0466966_0056678 3300044684 Bacteria 2479
66 Ga0466958_0040677 3300045836 Bacteria 2794
67 Ga0495590_0005596 3300046457 Bacteria 4961
68 Ga0495638_0000077 3300046460 Bacteria 158724
69 Ga0495638_0000181 3300046460 Bacteria 96473
70 Ga0495638_0002193 3300046460 Bacteria 16321
71 Ga0495650_0059686 3300046471 Bacteria 1535
72 Ga0495607_0080303 3300046501 Bacteria 1794
73 Ga0495583_0001262 3300046506 Bacteria 26569
74 Ga0495583_0006872 3300046506 Bacteria 7325
75 Ga0495606_0041452 3300046507 Bacteria 3087
76 Ga0495610_0000652 3300046512 Bacteria 33872
77 Ga0495610_0006698 3300046512 Bacteria 7839
78 Ga0495610_0008020 3300046512 Bacteria 6913
79 Ga0495616_0046293 3300046513 Bacteria 2196
80 Ga0495620_0001996 3300046515 Bacteria 11927
81 Ga0495620_0013220 3300046515 Bacteria 4234
82 Ga0495620_0029106 3300046515 Bacteria 2560
83 Ga0495631_0029237 3300046518 Bacteria 2508
84 Ga0495632_0100155 3300046519 Bacteria 1366
85 Ga0495643_0000485 3300046522 Bacteria 50393
86 Ga0495643_0025192 3300046522 Bacteria 3368
87 Ga0495643_0049367 3300046522 Bacteria 2270
88 Ga0495648_0103833 3300046524 Bacteria 1561
89 Ga0495663_0000279 3300046525 Bacteria 19611
90 Ga0495663_0001957 3300046525 Bacteria 6341
91 Ga0495652_0106503 3300046529 Bacteria 2264
92 Ga0495654_0050333 3300046530 Bacteria 2037
93 Ga0495597_0008629 3300046542 Bacteria 5098
94 Ga0495622_0036455 3300046557 Bacteria 2293
95 Ga0495668_0006782 3300046616 Bacteria 7441
96 Ga0495611_0025892 3300046648 Bacteria 2557
97 Ga0495625_0000648 3300046660 Bacteria 50041
98 Ga0495625_0003070 3300046660 Bacteria 17099
99 Ga0495625_0009169 3300046660 Bacteria 8315
100 Ga0495625_0032846 3300046660 Bacteria 3843
101 Ga0495625_0077363 3300046660 Bacteria 2325
102 Ga0495661_0031653 3300046665 Bacteria 3354
103 Ga0495588_0000476 3300046674 Bacteria 19882
104 Ga0495649_0001655 3300046694 Bacteria 16576
105 Ga0495660_0023578 3300046810 Bacteria 3509
106 Ga0495660_0035848 3300046810 Bacteria 2769
107 Ga0495604_0083028 3300047317 Bacteria 2395
108 Ga0495687_001136 3300047443 Bacteria 25798
109 Ga0495687_001635 3300047443 Bacteria 20166
110 Ga0495687_002009 3300047443 Bacteria 17245
111 Ga0495687_002044 3300047443 Bacteria 16990
112 Ga0495686_0014954 3300047472 Bacteria 5323
113 Ga0495686_0053097 3300047472 Bacteria 2541
114 Ga0496117_0001781 3300048920 Bacteria 29474
115 Ga0496117_0120487 3300048920 Bacteria 1613
116 Ga0496118_0000168 3300048921 Bacteria 118938
117 Ga0496121_0014898 3300048924 Bacteria 8196
118 Ga0496122_0028700 3300048925 Bacteria 4712
119 Ga0495678_000609 3300049459 Bacteria 33612
120 Ga0495678_000848 3300049459 Bacteria 27312
121 Ga0495678_032583 3300049459 Bacteria 2158
122 Ga0495682_0001860 3300049460 Bacteria 10564
123 Ga0501032_0306644 3300049569 Bacteria 1026
124 Ga0501033_0071185 3300049570 Bacteria 2555
125 Ga0501033_0105327 3300049570 Bacteria 2056
126 Ga0501034_0009309 3300049571 Bacteria 10291
127 Ga0501034_0068022 3300049571 Bacteria 3573
128 Ga0501034_0096325 3300049571 Bacteria 2955
129 Ga0501038_0152088 3300049574 Bacteria 1886
130 Ga0501043_0001694 3300049579 Bacteria 19128
131 Ga0501046_0004501 3300049580 Bacteria 12631
132 Ga0501047_0039633 3300049581 Bacteria 4556
133 Ga0501047_0510665 3300049581 Bacteria 1028
134 Ga0501070_0028195 3300049586 Bacteria 4708
135 Ga0501070_0149098 3300049586 Bacteria 1930
136 Ga0501044_0239750 3300049823 Bacteria 1757
137 nmdc:mga0yw44_2777_c1 3300050492 Bacteria 7585
138 nmdc:mga07m45_3468_c1 3300050496 Bacteria 7605
139 nmdc:mga0sz30_727_c3 3300050516 Bacteria 5068
140 Ga0500644_0030944 3300053088 Bacteria 1698
141 Ga0500555_031921 3300053103 Bacteria 1490
142 Ga0500569_002314 3300053109 Bacteria 3735
143 Ga0500592_000002 3300053116 Bacteria 141670
144 Ga0500594_0004702 3300053118 Bacteria 3015
145 Ga0500595_010048 3300053119 Bacteria 3781
146 Ga0500608_000569 3300053122 Bacteria 13771
147 Ga0500618_006929 3300053125 Bacteria 3279
148 Ga0500559_0002922 3300053136 Bacteria 8595
149 Ga0500564_013909 3300053138 Bacteria 3609
150 Ga0500574_000012 3300053141 Bacteria 46179
151 Ga0500577_0124637 3300053142 Bacteria 1075
152 Ga0500590_012353 3300053148 Bacteria 4352
153 Ga0500616_0016234 3300053153 Bacteria 4243
154 Ga0500622_0000687 3300053156 Bacteria 29908
155 Ga0500622_0000969 3300053156 Bacteria 24356
156 Ga0500624_000374 3300053157 Bacteria 14332
157 Ga0500627_0000026 3300053158 Bacteria 100362
158 Ga0500636_0000267 3300053177 Bacteria 28795
159 Ga0501084_0000156 3300054114 Bacteria 52508
160 Ga0501082_0120610 3300060353 Bacteria 2273

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300021320 Ga0214544_1000475 Ga0214544_100047521 274
2 3300021321 Ga0214542_1000584 Ga0214542_100058459 274
3 3300021327 Ga0214543_1000453 Ga0214543_100045312 274
4 3300013250 Ga0171462_1063 Ga0171462_106312 275
5 iso_pu_bacteria 2585427593 2585840889 277
6 iso_pu_bacteria 8016622563 8016630775 280
7 iso_pu_bacteria 8019538911 8019542258 280
8 iso_pu_bacteria 8019547302 8019547362 280
9 3300049823 Ga0501044_0239750 Ga0501044_0239750_33_887 283
10 3300003775 Ga0055524_1006060 Ga0055524_10060605 287
11 3300003790 Ga0055528_1000018 Ga0055528_100001866 287
12 3300025273 Ga0209673_1000055 Ga0209673_100005566 287
13 3300025295 Ga0209564_1009534 Ga0209564_10095341 287
14 3300025299 Ga0209256_1000147 Ga0209256_100014766 287
15 iso_pu_bacteria 2818991461 2819687818 289
16 3300053177 Ga0500636_0000267 Ga0500636_0000267_13591_14508 296
17 iso_pu_bacteria 2508501042 2508690861 298
18 iso_pu_bacteria 2513237104 2513721106 298
19 iso_pu_bacteria 2824704595 2824705813 298
20 iso_pu_bacteria 2841957949 2841964549 298
21 iso_pu_bacteria 2874620515 2874622861 298
22 iso_pu_bacteria 2874628541 2874632383 298
23 iso_pu_bacteria 2932784394 2932791755 298
24 iso_pu_bacteria 2932828146 2932836250 298
25 iso_pu_bacteria 2935638405 2935645709 298
26 iso_pu_bacteria 2935648319 2935653170 298
27 iso_pu_bacteria 2935656913 2935661753 298
28 iso_pu_bacteria 2935665750 2935673221 298
29 iso_pu_bacteria 2935769743 2935776746 298
30 iso_pu_bacteria 2935785616 2935792564 298
31 iso_pu_bacteria 2935793552 2935800640 298
32 iso_pu_bacteria 2935810662 2935818888 298
33 iso_pu_bacteria 2935827899 2935835031 298
34 iso_pu_bacteria 2935837841 2935846142 298
35 iso_pu_bacteria 2936011229 2936015890 298
36 iso_pu_bacteria 2936019824 2936024673 298
37 iso_pu_bacteria 2936028420 2936033904 298
38 iso_pu_bacteria 2936037263 2936045426 298
39 iso_pu_bacteria 2936046547 2936051633 298
40 iso_pu_bacteria 2936055302 2936063414 298
41 iso_pu_bacteria 2941538514 2941546162 298
42 iso_pu_bacteria 8016511872 8016513241 298
43 iso_pu_bacteria 8016603502 8016603647 298
44 iso_pu_bacteria 8016613128 8016613710 298
45 iso_pu_bacteria 8017057580 8017067728 298
46 3300046810 Ga0495660_0035848 Ga0495660_0035848_1508_2413 299
47 3300049460 Ga0495682_0001860 Ga0495682_0001860_9029_9934 299
48 iso_pu_bacteria 2667528174 2671113297 299
49 iso_pu_bacteria 2891088606 2891091452 299
50 iso_pu_bacteria 8046767195 8046771174 299
51 3300005458 Ga0070681_10047707 Ga0070681_100477076 300
52 iso_pu_bacteria 2509276033 2509444858 300
53 iso_pu_bacteria 2582581866 2585397195 300
54 iso_pu_bacteria 2599185236 2599718821 300
55 iso_pu_bacteria 2643221557 2643808893 300
56 iso_pu_bacteria 2643221580 2643912154 300
57 iso_pu_bacteria 2643221610 2644064331 300
58 iso_pu_bacteria 2643221668 2644379716 300
59 iso_pu_bacteria 2643221675 2644416162 300
60 iso_pu_bacteria 2643221680 2644449203 300
61 iso_pu_bacteria 2643221688 2644492959 300
62 iso_pu_bacteria 2643221726 2644691972 300
63 iso_pu_bacteria 2791355082 2792579941 300
64 iso_pu_bacteria 2808606387 2808989783 300
65 iso_pu_bacteria 2874168670 2874172834 300
66 iso_pu_bacteria 2889790730 2889791686 300
67 iso_pu_bacteria 2896384573 2896390547 300
68 3300005843 Ga0068860_100000058 Ga0068860_10000005895 301
69 3300006186 Ga0075369_10005921 Ga0075369_100059214 301
70 3300011119 Ga0105246_10215399 Ga0105246_102153992 301
71 3300028381 Ga0268264_10000022 Ga0268264_10000022349 301
72 3300031730 Ga0307516_10001045 Ga0307516_1000104522 301
73 3300039062 Ga0400483_181568 Ga0400483_181568_97_1011 301
74 3300048920 Ga0496117_0120487 Ga0496117_0120487_355_1272 301
75 3300050492 nmdc:mga0yw44_2777_c1 nmdc:mga0yw44_2777_c1_2264_3244 301
76 3300050516 nmdc:mga0sz30_727_c3 nmdc:mga0sz30_727_c3_509_1426 301
77 3300053088 Ga0500644_0030944 Ga0500644_0030944_316_1233 301
78 3300053136 Ga0500559_0002922 Ga0500559_0002922_4726_5643 301
79 3300054114 Ga0501084_0000156 Ga0501084_0000156_25577_26497 301
80 iso_pu_bacteria 2509276021 2509386521 301
81 iso_pu_bacteria 2509276021 2509392761 301
82 iso_pu_bacteria 2510065019 2510137263 301
83 iso_pu_bacteria 2513237103 2513713692 301
84 iso_pu_bacteria 2513237140 2513885899 301
85 iso_pu_bacteria 2517093000 2517099920 301
86 iso_pu_bacteria 2517287029 2517411632 301
87 iso_pu_bacteria 2517487022 2517565027 301
88 iso_pu_bacteria 2582581867 2585399355 301
89 iso_pu_bacteria 2585427526 2585529736 301
90 iso_pu_bacteria 2585427528 2585543535 301
91 iso_pu_bacteria 2599185236 2599723614 301
92 iso_pu_bacteria 2643221610 2644066767 301
93 iso_pu_bacteria 2643221634 2644193995 301
94 iso_pu_bacteria 2643221675 2644417713 301
95 iso_pu_bacteria 2643221680 2644450989 301
96 iso_pu_bacteria 2643221726 2644691792 301
97 iso_pu_bacteria 2838074704 2838080479 301
98 iso_pu_bacteria 2854916844 2854917918 301
99 iso_pu_bacteria 2936996657 2937001351 301
100 iso_pu_bacteria 2984587000 2984588993 301
101 iso_pu_bacteria 639633055 639651064 301
102 iso_pu_bacteria 8005301065 8005301969 301
103 iso_pu_bacteria 8018127388 8018128433 301
104 iso_pu_bacteria 8056382006 8056384342 301
105 3300003320 rootH2_10002275 rootH2_100022753 302
106 3300003323 rootH1_10029221 rootH1_100292213 302
107 3300005458 Ga0070681_10005771 Ga0070681_100057713 302
108 3300005539 Ga0068853_100184620 Ga0068853_1001846202 302
109 3300005548 Ga0070665_100112332 Ga0070665_1001123322 302
110 3300005985 Ga0081539_10003035 Ga0081539_100030357 302
111 3300007265 Ga0099794_10199891 Ga0099794_101998911 302
112 3300009174 Ga0105241_10083208 Ga0105241_100832082 302
113 3300021388 Ga0213875_10001153 Ga0213875_100011539 302
114 3300025253 Ga0209677_102529 Ga0209677_1025294 302
115 3300025297 Ga0209758_1000799 Ga0209758_100079944 302
116 3300025912 Ga0207707_10004450 Ga0207707_100044503 302
117 3300028379 Ga0268266_10114555 Ga0268266_101145554 302
118 3300028556 Ga0265337_1000089 Ga0265337_100008917 302
119 3300028573 Ga0265334_10001977 Ga0265334_100019777 302
120 3300031249 Ga0265339_10040365 Ga0265339_100403652 302
121 3300031595 Ga0265313_10027336 Ga0265313_100273363 302
122 3300036647 Ga0316582_0323800 Ga0316582_0323800_42_959 302
123 3300037471 Ga0395905_0003569 Ga0395905_0003569_14621_15550 302
124 3300037853 Ga0436364_1399463 Ga0436364_1399463_5061_5975 302
125 3300039447 Ga0436361_1133716 Ga0436361_1133716_626_1540 302
126 3300044684 Ga0466966_0056678 Ga0466966_0056678_1123_2064 302
127 3300045836 Ga0466958_0040677 Ga0466958_0040677_1104_2018 302
128 3300046460 Ga0495638_0002193 Ga0495638_0002193_3446_4363 302
129 3300046506 Ga0495583_0006872 Ga0495583_0006872_2713_3630 302
130 3300046522 Ga0495643_0049367 Ga0495643_0049367_960_1877 302
131 3300046525 Ga0495663_0001957 Ga0495663_0001957_1973_2890 302
132 3300046529 Ga0495652_0106503 Ga0495652_0106503_492_1406 302
133 3300046660 Ga0495625_0000648 Ga0495625_0000648_45667_46584 302
134 3300047317 Ga0495604_0083028 Ga0495604_0083028_995_1909 302
135 3300047443 Ga0495687_002009 Ga0495687_002009_12871_13788 302
136 3300047443 Ga0495687_002044 Ga0495687_002044_15324_16241 302
137 3300048924 Ga0496121_0014898 Ga0496121_0014898_3409_4326 302
138 3300048925 Ga0496122_0028700 Ga0496122_0028700_863_1780 302
139 3300049459 Ga0495678_000848 Ga0495678_000848_22981_23898 302
140 3300049569 Ga0501032_0306644 Ga0501032_0306644_86_1000 302
141 3300049570 Ga0501033_0071185 Ga0501033_0071185_698_1612 302
142 3300049570 Ga0501033_0105327 Ga0501033_0105327_334_1248 302
143 3300049571 Ga0501034_0009309 Ga0501034_0009309_4990_5904 302
144 3300049571 Ga0501034_0068022 Ga0501034_0068022_1315_2229 302
145 3300049571 Ga0501034_0096325 Ga0501034_0096325_707_1621 302
146 3300049574 Ga0501038_0152088 Ga0501038_0152088_219_1133 302
147 3300049579 Ga0501043_0001694 Ga0501043_0001694_1306_2220 302
148 3300049580 Ga0501046_0004501 Ga0501046_0004501_3304_4218 302
149 3300049581 Ga0501047_0039633 Ga0501047_0039633_157_1071 302
150 3300049581 Ga0501047_0510665 Ga0501047_0510665_80_994 302
151 3300049586 Ga0501070_0028195 Ga0501070_0028195_1929_2843 302
152 3300049586 Ga0501070_0149098 Ga0501070_0149098_252_1166 302
153 3300050496 nmdc:mga07m45_3468_c1 nmdc:mga07m45_3468_c1_2960_3877 302
154 3300053103 Ga0500555_031921 Ga0500555_031921_153_1070 302
155 3300053116 Ga0500592_000002 Ga0500592_000002_41518_42435 302
156 3300053119 Ga0500595_010048 Ga0500595_010048_1099_2013 302
157 3300053122 Ga0500608_000569 Ga0500608_000569_10827_11744 302
158 3300053158 Ga0500627_0000026 Ga0500627_0000026_99202_100119 302
159 3300060353 Ga0501082_0120610 Ga0501082_0120610_944_1858 302
160 3300028800 Ga0265338_10008439 Ga0265338_1000843912 303
161 3300031247 Ga0265340_10095952 Ga0265340_100959522 303
162 3300053156 Ga0500622_0000969 Ga0500622_0000969_19751_20668 303
163 3300003775 Ga0055524_1001298 Ga0055524_10012988 304
164 3300006946 Ga0079104_1000560 Ga0079104_100056013 304
165 3300025299 Ga0209256_1000089 Ga0209256_1000089185 304
166 3300031730 Ga0307516_10157542 Ga0307516_101575422 304
167 3300041491 Ga0451833_0267764 Ga0451833_0267764_16_933 304
168 3300041494 Ga0451837_0373913 Ga0451837_0373913_4505_5422 304
169 3300041496 Ga0451839_0776885 Ga0451839_0776885_2219_3136 304
170 3300041498 Ga0451841_0426999 Ga0451841_0426999_1352_2269 304
171 3300041501 Ga0451845_0374388 Ga0451845_0374388_3532_4449 304
172 3300041503 Ga0451847_0485613 Ga0451847_0485613_16_933 304
173 3300041505 Ga0451849_0941713 Ga0451849_0941713_2143_3060 304
174 3300041507 Ga0451851_1056227 Ga0451851_1056227_16_933 304
175 3300041511 Ga0451855_0308928 Ga0451855_0308928_2218_3135 304
176 3300046460 Ga0495638_0000077 Ga0495638_0000077_120841_121761 304
177 3300046512 Ga0495610_0000652 Ga0495610_0000652_9796_10713 304
178 3300046515 Ga0495620_0013220 Ga0495620_0013220_713_1630 304
179 3300046519 Ga0495632_0100155 Ga0495632_0100155_52_969 304
180 3300046660 Ga0495625_0077363 Ga0495625_0077363_872_1792 304
181 3300047472 Ga0495686_0014954 Ga0495686_0014954_2374_3291 304
182 3300048920 Ga0496117_0001781 Ga0496117_0001781_113_1030 304
183 3300049459 Ga0495678_032583 Ga0495678_032583_441_1358 304
184 3300002987 JGI25159J45721_1014870 JGI25159J45721_10148702 305
185 3300003354 JGI25160J50197_1000332 JGI25160J50197_100033212 305
186 3300003374 JGI25161J50226_1000252 JGI25161J50226_100025223 305
187 3300004625 Ga0055543_1000196 Ga0055543_100019635 305
188 3300005262 Ga0065165_1001098 Ga0065165_100109823 305
189 3300025208 Ga0209436_115218 Ga0209436_1152181 305
190 3300025284 Ga0209130_1000394 Ga0209130_100039422 305
191 3300025297 Ga0209758_1019766 Ga0209758_10197662 305
192 3300025302 Ga0207426_1000416 Ga0207426_100041656 305
193 3300041492 Ga0451835_0255525 Ga0451835_0255525_1683_2600 305
194 3300041501 Ga0451845_0357455 Ga0451845_0357455_102_1019 305
195 3300041507 Ga0451851_1291670 Ga0451851_1291670_227_1144 305
196 3300046457 Ga0495590_0005596 Ga0495590_0005596_3079_3996 305
197 3300046460 Ga0495638_0000181 Ga0495638_0000181_83497_84420 305
198 3300046471 Ga0495650_0059686 Ga0495650_0059686_135_1052 305
199 3300046501 Ga0495607_0080303 Ga0495607_0080303_486_1403 305
200 3300046506 Ga0495583_0001262 Ga0495583_0001262_8382_9299 305
201 3300046507 Ga0495606_0041452 Ga0495606_0041452_961_1878 305
202 3300046512 Ga0495610_0006698 Ga0495610_0006698_704_1621 305
203 3300046512 Ga0495610_0008020 Ga0495610_0008020_5800_6717 305
204 3300046513 Ga0495616_0046293 Ga0495616_0046293_887_1804 305
205 3300046515 Ga0495620_0001996 Ga0495620_0001996_353_1270 305
206 3300046515 Ga0495620_0029106 Ga0495620_0029106_1495_2412 305
207 3300046518 Ga0495631_0029237 Ga0495631_0029237_713_1630 305
208 3300046522 Ga0495643_0000485 Ga0495643_0000485_12067_12990 305
209 3300046522 Ga0495643_0025192 Ga0495643_0025192_764_1681 305
210 3300046524 Ga0495648_0103833 Ga0495648_0103833_491_1408 305
211 3300046525 Ga0495663_0000279 Ga0495663_0000279_10615_11538 305
212 3300046530 Ga0495654_0050333 Ga0495654_0050333_409_1326 305
213 3300046542 Ga0495597_0008629 Ga0495597_0008629_2682_3599 305
214 3300046557 Ga0495622_0036455 Ga0495622_0036455_61_984 305
215 3300046616 Ga0495668_0006782 Ga0495668_0006782_3789_4706 305
216 3300046648 Ga0495611_0025892 Ga0495611_0025892_373_1296 305
217 3300046660 Ga0495625_0003070 Ga0495625_0003070_490_1407 305
218 3300046660 Ga0495625_0009169 Ga0495625_0009169_6198_7115 305
219 3300046660 Ga0495625_0032846 Ga0495625_0032846_168_1091 305
220 3300046665 Ga0495661_0031653 Ga0495661_0031653_1135_2058 305
221 3300046674 Ga0495588_0000476 Ga0495588_0000476_12058_12981 305
222 3300046694 Ga0495649_0001655 Ga0495649_0001655_7481_8398 305
223 3300046810 Ga0495660_0023578 Ga0495660_0023578_1618_2535 305
224 3300047443 Ga0495687_001136 Ga0495687_001136_12062_12985 305
225 3300047443 Ga0495687_001635 Ga0495687_001635_10707_11624 305
226 3300047472 Ga0495686_0053097 Ga0495686_0053097_157_1074 305
227 3300048921 Ga0496118_0000168 Ga0496118_0000168_98883_99800 305
228 3300049459 Ga0495678_000609 Ga0495678_000609_20615_21538 305
229 3300053109 Ga0500569_002314 Ga0500569_002314_1863_2780 305
230 3300053118 Ga0500594_0004702 Ga0500594_0004702_1684_2601 305
231 3300053125 Ga0500618_006929 Ga0500618_006929_111_1034 305
232 3300053138 Ga0500564_013909 Ga0500564_013909_1665_2588 305
233 3300053141 Ga0500574_000012 Ga0500574_000012_4210_5133 305
234 3300053142 Ga0500577_0124637 Ga0500577_0124637_14_931 305
235 3300053148 Ga0500590_012353 Ga0500590_012353_3272_4195 305
236 3300053153 Ga0500616_0016234 Ga0500616_0016234_1603_2520 305
237 3300053156 Ga0500622_0000687 Ga0500622_0000687_15592_16509 305
238 3300053157 Ga0500624_000374 Ga0500624_000374_1408_2331 305

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08843

AbiEii

Nucleotidyl transferase AbiEii toxin, Type IV TA system

12

281

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6y56-assembly1.cif.gz_A ment4, nucleotidyltransferase toxin rv2826c from mycobacterium tuberculosis h37rv 0.6637 2 281
6y56-assembly1.cif.gz_A ment4, nucleotidyltransferase toxin rv2826c from mycobacterium tuberculosis h37rv 0.6337 2 281
5kqj-assembly1.cif.gz_A solution structure of antibiotic-resistance factor ant(2'')-ia reveals substrate-regulated conformation dynamics 0.6037 6 187
5oea-assembly3.cif.gz_C structure of large terminase from the thermophilic bacteriophage d6e in complex with atp-gamma-s (crystal form 3) 0.5795 65 110
2zhp-assembly1.cif.gz_B crystal structure of bleomycin-binding protein from streptoalloteichus hindustanus complexed with bleomycin derivative 0.5724 73 112
ID Description Score Start End Superfamily
3itwB01 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.6259 69 111 3.30.720.120
af_B8JMA5_289_368_3.30.460.40 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; 0.576 26 111 3.30.460.40
af_Q7KRZ3_133_240_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.5481 80 111 2.30.29.30
af_B8JMA5_289_368_3.30.460.40 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; 0.5459 26 111 3.30.460.40
3ct8A00 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.5356 46 111 3.10.180.10
ID Description Score Start End GO Terms
AF-A0A437P871-F1-model_v4 Uncharacterized protein 0.9969 153 303
AF-A3W959-F1-model_v4 Ync 0.9966 1 281
AF-A9EF23-F1-model_v4 deleted 0.9959 148 303
AF-A0A2E2PDE2-F1-model_v4 deleted 0.9915 51 303
AF-A0A7C1MG39-F1-model_v4 deleted 0.9804 1 225

Feature Viewer

pLDDT pTM Quality
93.58 0.91 High
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Predicted Structure (AlphaFold2)

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