F351183

General Info

Members Datasets Scaffolds Average Seq Length
238 174 228 277

Family's Representative Sequence

Representative Sequence 3300041512|Ga0451853_0673184|Ga0451853_0673184_31_1005
Length 324
Sequence MPCRLACLLKWRYTFTNRLRNITVFAASSIGVKFTKSRFNYIIEVHTDNLYTMINTTHLFKPLDKKLIALLRSLTPEEWERPTVARQWNVKDVAAHLLDGNIRTISSLRDHYRGVNAGAIHSFEDLVAFLNRINAGWVMAMKRVSPAMLTDWLETTGDQYSALMEAANLQAPAPVAVSWAGDEESPNWFHIAREYTEKWHHQQQVRDAVGRPGILTAELYYPVLDTLMMALPHTYRNTGAANGTVVQVSISGDGGGHWFLIHEGKWRLDKTNDLPVAAHTGIDGSVAWKLFTKSWRRKDIEPYITIEGDKQLAEVALEMIAVMA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
5 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
6 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
7 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
8 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
9 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
10 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
11 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
12 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
20 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
29 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
116 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
120 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
121 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
122 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
123 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
129 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
130 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
131 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
132 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
133 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
134 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
141 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
142 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
143 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
144 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
145 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
146 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
150 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
151 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
152 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
153 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
158 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
159 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
160 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
163 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
170 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
171 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
174 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.8
Metatranscriptomes 0
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.98
Nodule 0
Rhizoplane 0.42
Rhizosphere 78.99
Stem 0
Stem Tuber 0
Unclassified 12.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1496964 2162886007 Bacteria 130484
2 JGI24739J22299_10001869 3300001989 Bacteria 8026
3 JGI24739J22299_10011597 3300001989 Bacteria 3253
4 JGI24737J22298_10000332 3300001990 Bacteria 15789
5 JGI24735J21928_10000001 3300002067 Bacteria 650042
6 rootH1_10071129 3300003316 Bacteria 2371
7 rootH2_10000636 3300003320 Bacteria 11774
8 rootH2_10005623 3300003320 Bacteria 6590
9 rootL2_10040342 3300003322 Bacteria 15397
10 rootL2_10058401 3300003322 Bacteria 2474
11 rootL2_10074832 3300003322 Bacteria 1987
12 rootL2_10090936 3300003322 Bacteria 6358
13 rootL2_10195426 3300003322 Bacteria 1343
14 rootH1_10134428 3300003323 Bacteria 2677
15 rootH1_10267621 3300003323 Bacteria 2860
16 JGI25160J50197_1000193 3300003354 Bacteria 51332
17 Ga0055536_1008793 3300003781 Bacteria 4279
18 Ga0065165_1000266 3300005262 Bacteria 90228
19 Ga0065165_1003398 3300005262 Bacteria 11245
20 Ga0065165_1043742 3300005262 Bacteria 1313
21 Ga0065714_10066692 3300005288 Bacteria 6460
22 Ga0065714_10093993 3300005288 Bacteria 1830
23 Ga0065704_10070178 3300005289 Bacteria 132449
24 Ga0065704_10139369 3300005289 Bacteria 1534
25 Ga0070670_100285114 3300005331 Bacteria 1442
26 Ga0068869_100008345 3300005334 Bacteria 6674
27 Ga0070666_10000028 3300005335 Bacteria 144796
28 Ga0068868_100071836 3300005338 Bacteria 2760
29 Ga0070668_100114504 3300005347 Unclassified 2149
30 Ga0070713_100079708 3300005436 Bacteria 2790
31 Ga0070681_10405097 3300005458 Bacteria 1275
32 Ga0068867_100284942 3300005459 Unclassified 1356
33 Ga0070685_10007362 3300005466 Bacteria 5630
34 Ga0070685_10419356 3300005466 Unclassified 931
35 Ga0070707_100000399 3300005468 Bacteria 42939
36 Ga0070698_100144307 3300005471 Bacteria 2330
37 Ga0070684_100077934 3300005535 Unclassified 2928
38 Ga0070697_100129720 3300005536 Unclassified 2114
39 Ga0068853_100006260 3300005539 Bacteria 9435
40 Ga0068853_100015921 3300005539 Bacteria 6180
41 Ga0068853_100138041 3300005539 Bacteria 2187
42 Ga0070695_100280450 3300005545 Bacteria 1224
43 Ga0070664_100153479 3300005564 Unclassified 2034
44 Ga0068852_100001114 3300005616 Bacteria 17722
45 Ga0068852_100231573 3300005616 Bacteria 1761
46 Ga0068852_100346990 3300005616 Bacteria 1448
47 Ga0068859_100000012 3300005617 Bacteria 300376
48 Ga0068859_100002589 3300005617 Bacteria 18405
49 Ga0068859_100008213 3300005617 Bacteria 10591
50 Ga0068864_100031394 3300005618 Bacteria 4507
51 Ga0068864_100533433 3300005618 Bacteria 1133
52 Ga0068851_10059700 3300005834 Bacteria 1951
53 Ga0068863_100001545 3300005841 Bacteria 22711
54 Ga0068863_100043312 3300005841 Bacteria 4274
55 Ga0068858_100050042 3300005842 Bacteria 3868
56 Ga0068860_100123733 3300005843 Unclassified 2478
57 Ga0068862_100286415 3300005844 Unclassified 1511
58 Ga0070716_100244300 3300006173 Unclassified 1219
59 Ga0075366_10096392 3300006195 Bacteria 1773
60 Ga0097621_100012793 3300006237 Bacteria 6234
61 Ga0068871_100008394 3300006358 Bacteria 7428
62 Ga0075434_100012826 3300006871 Bacteria 7956
63 Ga0097620_100000012 3300006931 Bacteria 300376
64 Ga0097620_100002589 3300006931 Bacteria 18405
65 Ga0097620_100008213 3300006931 Bacteria 10591
66 Ga0075435_100125809 3300007076 Bacteria 2142
67 Ga0105240_10000117 3300009093 Bacteria 165286
68 Ga0105240_10000119 3300009093 Bacteria 163675
69 Ga0111539_10031477 3300009094 Bacteria 6443
70 Ga0111539_10120592 3300009094 Bacteria 3073
71 Ga0105245_10334528 3300009098 Unclassified 1496
72 Ga0105247_10011354 3300009101 Bacteria 5371
73 Ga0114129_10080569 3300009147 Bacteria 4525
74 Ga0105241_10001881 3300009174 Bacteria 15918
75 Ga0105241_10116039 3300009174 Bacteria 2150
76 Ga0105237_10002273 3300009545 Bacteria 23899
77 Ga0105238_10274342 3300009551 Bacteria 1667
78 Ga0105249_10002372 3300009553 Bacteria 16350
79 Ga0105249_10108086 3300009553 Unclassified 2625
80 Ga0105239_10000097 3300010375 Bacteria 122808
81 Ga0105239_10033437 3300010375 Bacteria 5647
82 Ga0105239_10313327 3300010375 Bacteria 1769
83 Ga0157371_10018388 3300013102 Bacteria 5168
84 Ga0157370_10091720 3300013104 Bacteria 2852
85 Ga0157369_10241613 3300013105 Bacteria 1886
86 Ga0157374_10079878 3300013296 Bacteria 3100
87 Ga0157374_10527064 3300013296 Unclassified 1188
88 Ga0157378_10002969 3300013297 Bacteria 15088
89 Ga0157378_10017465 3300013297 Bacteria 6298
90 Ga0157378_10023299 3300013297 Bacteria 5449
91 Ga0157378_10409593 3300013297 Bacteria 1338
92 Ga0163162_10000282 3300013306 Bacteria 46472
93 Ga0163162_10002966 3300013306 Bacteria 16195
94 Ga0163162_10200764 3300013306 Unclassified 2123
95 Ga0157372_10005473 3300013307 Bacteria 13491
96 Ga0157372_10010485 3300013307 Bacteria 9864
97 Ga0157375_10112333 3300013308 Unclassified 2825
98 Ga0157375_10115176 3300013308 Unclassified 2791
99 Ga0157375_10164714 3300013308 Bacteria 2361
100 Ga0163163_10273508 3300014325 Unclassified 1740
101 Ga0157380_10000589 3300014326 Bacteria 22387
102 Ga0157380_10001198 3300014326 Bacteria 16785
103 Ga0157380_10042962 3300014326 Bacteria 3536
104 Ga0157377_10264978 3300014745 Bacteria 1120
105 Ga0157379_10025142 3300014968 Bacteria 5286
106 Ga0157376_10178777 3300014969 Bacteria 1938
107 Ga0163161_10238244 3300017792 Bacteria 1414
108 Ga0209676_1000948 3300025292 Bacteria 35545
109 Ga0209050_1003222 3300025298 Bacteria 12345
110 Ga0207426_1000026 3300025302 Bacteria 515228
111 Ga0207426_1055962 3300025302 Bacteria 1153
112 Ga0207656_10039754 3300025321 Bacteria 1991
113 Ga0207710_10231587 3300025900 Unclassified 919
114 Ga0207680_10001984 3300025903 Bacteria 9578
115 Ga0207647_10125197 3300025904 Bacteria 1513
116 Ga0207705_10328412 3300025909 Bacteria 1176
117 Ga0207654_10006407 3300025911 Bacteria 5925
118 Ga0207707_10048091 3300025912 Bacteria 3715
119 Ga0207695_10000077 3300025913 Bacteria 307107
120 Ga0207695_10000139 3300025913 Bacteria 216873
121 Ga0207646_10000586 3300025922 Bacteria 47556
122 Ga0207650_10229078 3300025925 Bacteria 1498
123 Ga0207700_10122269 3300025928 Bacteria 2113
124 Ga0207644_10126657 3300025931 Bacteria 1950
125 Ga0207670_10292399 3300025936 Unclassified 1273
126 Ga0207704_10097387 3300025938 Bacteria 1951
127 Ga0207691_10325460 3300025940 Bacteria 1317
128 Ga0207689_10002542 3300025942 Bacteria 16930
129 Ga0207689_10012276 3300025942 Bacteria 7329
130 Ga0207712_10021994 3300025961 Bacteria 4193
131 Ga0207668_10127977 3300025972 Unclassified 1935
132 Ga0207668_10296636 3300025972 Unclassified 1332
133 Ga0207677_10315940 3300026023 Bacteria 1296
134 Ga0207703_10025909 3300026035 Bacteria 4614
135 Ga0207639_10040187 3300026041 Bacteria 3489
136 Ga0207639_10110399 3300026041 Bacteria 2240
137 Ga0207641_10000152 3300026088 Bacteria 98311
138 Ga0207641_10265268 3300026088 Bacteria 1609
139 Ga0207676_10029162 3300026095 Bacteria 4129
140 Ga0207675_100051139 3300026118 Bacteria 3855
141 Ga0207698_10006207 3300026142 Bacteria 7436
142 Ga0207698_10246516 3300026142 Bacteria 1632
143 Ga0207428_10193037 3300027907 Unclassified 1534
144 Ga0268265_10452073 3300028380 Unclassified 1200
145 Ga0268264_10002106 3300028381 Bacteria 17740
146 Ga0307517_10128392 3300028786 Bacteria 1838
147 Ga0307515_10000003 3300028794 Bacteria 891317
148 Ga0307515_10000010 3300028794 Bacteria 651586
149 Ga0307515_10000039 3300028794 Bacteria 323229
150 Ga0307515_10219520 3300028794 Bacteria 1723
151 Ga0265338_10013797 3300028800 Bacteria 9079
152 Ga0265332_10071138 3300031238 Bacteria 1481
153 Ga0265325_10036608 3300031241 Bacteria 2599
154 Ga0265339_10000472 3300031249 Bacteria 31419
155 Ga0265331_10000557 3300031250 Bacteria 33770
156 Ga0265327_10000239 3300031251 Bacteria 109804
157 Ga0307513_10323914 3300031456 Bacteria 1298
158 Ga0307509_10201297 3300031507 Bacteria 1828
159 Ga0265313_10000885 3300031595 Bacteria 30245
160 Ga0307508_10002859 3300031616 Bacteria 17909
161 Ga0265314_10000051 3300031711 Bacteria 188851
162 Ga0265342_10003670 3300031712 Bacteria 12463
163 Ga0307405_10040435 3300031731 Bacteria 2824
164 Ga0307413_10000058 3300031824 Bacteria 28566
165 Ga0307412_10016531 3300031911 Unclassified 4398
166 Ga0307414_10200830 3300032004 Bacteria 1621
167 Ga0307411_10000005 3300032005 Bacteria 391311
168 Ga0307510_10010029 3300033180 Bacteria 11257
169 Ga0307510_10122979 3300033180 Bacteria 2293
170 Ga0373943_0111542 3300035170 Bacteria 1443
171 Ga0436363_0785668 3300039450 Bacteria 2184
172 Ga0439447_003968 3300041407 Bacteria 5179
173 Ga0451837_1011640 3300041494 Unclassified 1707
174 Ga0451853_0673184 3300041512 Bacteria 1026
175 Ga0451577_0006729 3300042876 Bacteria 11404
176 Ga0451577_0017168 3300042876 Bacteria 6690
177 Ga0451577_0037371 3300042876 Bacteria 4371
178 Ga0451577_0587353 3300042876 Bacteria 1011
179 Ga0453683_0034003 3300044673 Bacteria 3214
180 Ga0453684_0001293 3300044712 Bacteria 74352
181 Ga0453684_0007931 3300044712 Bacteria 19259
182 Ga0453684_0290434 3300044712 Bacteria 1862
183 Ga0451576_0051573 3300045051 Bacteria 4313
184 Ga0451576_0933099 3300045051 Unclassified 910
185 Ga0495638_0000006 3300046460 Bacteria 668846
186 Ga0495638_0152932 3300046460 Bacteria 1337
187 Ga0495650_0000013 3300046471 Bacteria 611135
188 Ga0495585_0000141 3300046492 Bacteria 79118
189 Ga0495583_0159432 3300046506 Bacteria 931
190 Ga0495606_0000010 3300046507 Bacteria 299893
191 Ga0495606_0014388 3300046507 Bacteria 6181
192 Ga0495606_0062422 3300046507 Bacteria 2379
193 Ga0495610_0070542 3300046512 Bacteria 1631
194 Ga0495643_0000043 3300046522 Bacteria 226821
195 Ga0495648_0122936 3300046524 Bacteria 1391
196 Ga0495633_0034089 3300046558 Bacteria 2450
197 Ga0495656_0060311 3300046615 Bacteria 1653
198 Ga0495668_0005043 3300046616 Bacteria 9100
199 Ga0495611_0000042 3300046648 Bacteria 94996
200 Ga0495625_0000100 3300046660 Bacteria 139983
201 Ga0495625_0234530 3300046660 Bacteria 1197
202 Ga0495661_0072721 3300046665 Bacteria 2005
203 Ga0495649_0000002 3300046694 Bacteria 1093458
204 Ga0495672_0032290 3300047320 Bacteria 3259
205 Ga0495686_0047043 3300047472 Bacteria 2725
206 Ga0496121_0016567 3300048924 Bacteria 7601
207 Ga0501300_001028 3300049523 Unclassified 4270
208 Ga0501227_057617 3300049665 Unclassified 991
209 Ga0501257_003798 3300049686 Bacteria 3265
210 Ga0501259_002561 3300049688 Bacteria 2932
211 Ga0501081_0197367 3300049743 Unclassified 1459
212 Ga0501266_000007 3300049763 Bacteria 291751
213 Ga0501266_002043 3300049763 Bacteria 2541
214 Ga0501268_004772 3300049765 Bacteria 1922
215 nmdc:mga0k408_21133_c1 3300050493 Bacteria 3653
216 nmdc:mga05p37_233428_c1 3300050507 Bacteria 2215
217 nmdc:mga08y16_104223_c1 3300050511 Bacteria 2953
218 nmdc:mga08y16_107726_c1 3300050511 Unclassified 2901
219 nmdc:mga0n895_374404_c1 3300050512 Unclassified 1441
220 nmdc:mga0a205_212977_c1 3300050515 Unclassified 1820
221 Ga0500592_000725 3300053116 Bacteria 5404
222 Ga0500628_002182 3300053129 Unclassified 3265
223 Ga0500628_067624 3300053129 Unclassified 888
224 Ga0500658_0000013 3300053134 Bacteria 153702
225 Ga0500616_0000065 3300053153 Bacteria 239287
226 Ga0500616_0024818 3300053153 Bacteria 3327
227 Ga0500624_000483 3300053157 Bacteria 11780
228 Ga0500645_078430 3300053730 Bacteria 944

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_104223_c1 nmdc:mga08y16_104223_c1_2258_2938 226
2 3300005843 Ga0068860_100123733 Ga0068860_1001237333 235
3 3300053730 Ga0500645_078430 Ga0500645_078430_182_934 250
4 3300006195 Ga0075366_10096392 Ga0075366_100963921 263
5 3300042876 Ga0451577_0037371 Ga0451577_0037371_1181_2011 264
6 3300044673 Ga0453683_0034003 Ga0453683_0034003_2312_3142 264
7 3300044712 Ga0453684_0007931 Ga0453684_0007931_6472_7302 264
8 3300045051 Ga0451576_0051573 Ga0451576_0051573_2950_3780 264
9 3300049665 Ga0501227_057617 Ga0501227_057617_81_902 264
10 3300049686 Ga0501257_003798 Ga0501257_003798_1368_2189 264
11 3300049688 Ga0501259_002561 Ga0501259_002561_1160_1981 264
12 3300049763 Ga0501266_002043 Ga0501266_002043_1651_2472 264
13 3300049765 Ga0501268_004772 Ga0501268_004772_1030_1851 264
14 3300046522 Ga0495643_0000043 Ga0495643_0000043_105373_106203 266
15 3300046615 Ga0495656_0060311 Ga0495656_0060311_741_1544 267
16 3300028794 Ga0307515_10000039 Ga0307515_10000039166 268
17 3300006871 Ga0075434_100012826 Ga0075434_1000128266 269
18 3300028800 Ga0265338_10013797 Ga0265338_100137972 269
19 3300031238 Ga0265332_10071138 Ga0265332_100711381 269
20 3300031241 Ga0265325_10036608 Ga0265325_100366082 269
21 3300031249 Ga0265339_10000472 Ga0265339_100004722 269
22 3300031250 Ga0265331_10000557 Ga0265331_1000055719 269
23 3300031595 Ga0265313_10000885 Ga0265313_1000088521 269
24 3300031711 Ga0265314_10000051 Ga0265314_10000051124 269
25 3300031712 Ga0265342_10003670 Ga0265342_100036702 269
26 3300050515 nmdc:mga0a205_212977_c1 nmdc:mga0a205_212977_c1_230_1087 269
27 iso_pu_bacteria 2522125168 2522551538 269
28 3300006173 Ga0070716_100244300 Ga0070716_1002443001 270
29 iso_pu_bacteria 2739367866 2740032888 270
30 3300028786 Ga0307517_10128392 Ga0307517_101283922 271
31 3300046648 Ga0495611_0000042 Ga0495611_0000042_23585_24403 271
32 3300003322 rootL2_10090936 rootL2_100909363 272
33 3300031507 Ga0307509_10201297 Ga0307509_102012972 272
34 3300031616 Ga0307508_10002859 Ga0307508_100028594 272
35 3300033180 Ga0307510_10010029 Ga0307510_100100295 272
36 3300046460 Ga0495638_0152932 Ga0495638_0152932_281_1099 272
37 3300046660 Ga0495625_0234530 Ga0495625_0234530_168_986 272
38 3300048924 Ga0496121_0016567 Ga0496121_0016567_2106_2924 272
39 3300003323 rootH1_10267621 rootH1_102676212 273
40 3300003781 Ga0055536_1008793 Ga0055536_10087932 273
41 3300005262 Ga0065165_1000266 Ga0065165_100026684 273
42 3300005347 Ga0070668_100114504 Ga0070668_1001145042 273
43 3300005459 Ga0068867_100284942 Ga0068867_1002849422 273
44 3300005844 Ga0068862_100286415 Ga0068862_1002864152 273
45 3300006358 Ga0068871_100008394 Ga0068871_1000083942 273
46 3300009553 Ga0105249_10108086 Ga0105249_101080862 273
47 3300013297 Ga0157378_10017465 Ga0157378_100174655 273
48 3300013306 Ga0163162_10200764 Ga0163162_102007642 273
49 3300014326 Ga0157380_10000589 Ga0157380_1000058916 273
50 3300014326 Ga0157380_10042962 Ga0157380_100429624 273
51 3300017792 Ga0163161_10238244 Ga0163161_102382442 273
52 3300025292 Ga0209676_1000948 Ga0209676_10009488 273
53 3300025302 Ga0207426_1055962 Ga0207426_10559622 273
54 3300025942 Ga0207689_10012276 Ga0207689_100122766 273
55 3300025972 Ga0207668_10127977 Ga0207668_101279772 273
56 3300026118 Ga0207675_100051139 Ga0207675_1000511394 273
57 3300028380 Ga0268265_10452073 Ga0268265_104520732 273
58 3300031731 Ga0307405_10040435 Ga0307405_100404353 273
59 3300032004 Ga0307414_10200830 Ga0307414_102008301 273
60 3300042876 Ga0451577_0006729 Ga0451577_0006729_44_868 273
61 3300044712 Ga0453684_0001293 Ga0453684_0001293_44620_45444 273
62 3300045051 Ga0451576_0933099 Ga0451576_0933099_43_867 273
63 3300003322 rootL2_10058401 rootL2_100584011 274
64 iso_pu_bacteria 2599185184 2599477525 274
65 iso_pu_bacteria 2919437846 2919441087 274
66 iso_pu_bacteria 2928078545 2928079435 274
67 iso_pu_bacteria 2928147474 2928148082 274
68 iso_pu_bacteria 2932082852 2932083976 274
69 3300003320 rootH2_10005623 rootH2_100056235 275
70 3300003322 rootL2_10040342 rootL2_1004034212 275
71 3300003322 rootL2_10195426 rootL2_101954263 275
72 3300005262 Ga0065165_1003398 Ga0065165_10033982 275
73 3300005262 Ga0065165_1043742 Ga0065165_10437422 275
74 3300005436 Ga0070713_100079708 Ga0070713_1000797082 275
75 3300025298 Ga0209050_1003222 Ga0209050_100322210 275
76 3300025928 Ga0207700_10122269 Ga0207700_101222692 275
77 3300028794 Ga0307515_10000003 Ga0307515_10000003108 275
78 3300031456 Ga0307513_10323914 Ga0307513_103239142 275
79 3300046460 Ga0495638_0000006 Ga0495638_0000006_211737_212564 275
80 3300046616 Ga0495668_0005043 Ga0495668_0005043_1383_2210 275
81 3300049523 Ga0501300_001028 Ga0501300_001028_832_1659 275
82 3300053129 Ga0500628_002182 Ga0500628_002182_435_1361 275
83 3300053153 Ga0500616_0000065 Ga0500616_0000065_202382_203209 275
84 iso_pu_bacteria 2643221600 2644011582 275
85 iso_pu_bacteria 2977232053 2977232558 275
86 3300003320 rootH2_10000636 rootH2_100006365 276
87 3300005331 Ga0070670_100285114 Ga0070670_1002851141 276
88 3300005334 Ga0068869_100008345 Ga0068869_1000083454 276
89 3300005335 Ga0070666_10000028 Ga0070666_1000002855 276
90 3300005338 Ga0068868_100071836 Ga0068868_1000718363 276
91 3300005466 Ga0070685_10007362 Ga0070685_100073623 276
92 3300005466 Ga0070685_10419356 Ga0070685_104193561 276
93 3300005468 Ga0070707_100000399 Ga0070707_10000039934 276
94 3300005471 Ga0070698_100144307 Ga0070698_1001443072 276
95 3300005536 Ga0070697_100129720 Ga0070697_1001297202 276
96 3300005616 Ga0068852_100001114 Ga0068852_10000111411 276
97 3300005617 Ga0068859_100000012 Ga0068859_100000012238 276
98 3300005617 Ga0068859_100008213 Ga0068859_1000082138 276
99 3300005618 Ga0068864_100031394 Ga0068864_1000313944 276
100 3300005618 Ga0068864_100533433 Ga0068864_1005334332 276
101 3300005834 Ga0068851_10059700 Ga0068851_100597003 276
102 3300005841 Ga0068863_100001545 Ga0068863_10000154516 276
103 3300005841 Ga0068863_100043312 Ga0068863_1000433123 276
104 3300005842 Ga0068858_100050042 Ga0068858_1000500424 276
105 3300006931 Ga0097620_100000012 Ga0097620_100000012238 276
106 3300006931 Ga0097620_100008213 Ga0097620_1000082135 276
107 3300007076 Ga0075435_100125809 Ga0075435_1001258092 276
108 3300009094 Ga0111539_10120592 Ga0111539_101205922 276
109 3300009098 Ga0105245_10334528 Ga0105245_103345282 276
110 3300009101 Ga0105247_10011354 Ga0105247_100113543 276
111 3300009147 Ga0114129_10080569 Ga0114129_100805692 276
112 3300009174 Ga0105241_10001881 Ga0105241_100018819 276
113 3300009545 Ga0105237_10002273 Ga0105237_1000227319 276
114 3300009553 Ga0105249_10002372 Ga0105249_100023729 276
115 3300010375 Ga0105239_10313327 Ga0105239_103133272 276
116 3300013296 Ga0157374_10079878 Ga0157374_100798784 276
117 3300013296 Ga0157374_10527064 Ga0157374_105270642 276
118 3300013297 Ga0157378_10002969 Ga0157378_100029694 276
119 3300013297 Ga0157378_10023299 Ga0157378_100232992 276
120 3300013297 Ga0157378_10409593 Ga0157378_104095932 276
121 3300013306 Ga0163162_10000282 Ga0163162_100002829 276
122 3300013308 Ga0157375_10112333 Ga0157375_101123332 276
123 3300013308 Ga0157375_10115176 Ga0157375_101151763 276
124 3300014325 Ga0163163_10273508 Ga0163163_102735082 276
125 3300014745 Ga0157377_10264978 Ga0157377_102649782 276
126 3300014968 Ga0157379_10025142 Ga0157379_100251424 276
127 3300014969 Ga0157376_10178777 Ga0157376_101787772 276
128 3300025321 Ga0207656_10039754 Ga0207656_100397542 276
129 3300025900 Ga0207710_10231587 Ga0207710_102315871 276
130 3300025903 Ga0207680_10001984 Ga0207680_100019846 276
131 3300025909 Ga0207705_10328412 Ga0207705_103284121 276
132 3300025911 Ga0207654_10006407 Ga0207654_100064074 276
133 3300025922 Ga0207646_10000586 Ga0207646_1000058617 276
134 3300025925 Ga0207650_10229078 Ga0207650_102290782 276
135 3300025931 Ga0207644_10126657 Ga0207644_101266573 276
136 3300025936 Ga0207670_10292399 Ga0207670_102923992 276
137 3300025940 Ga0207691_10325460 Ga0207691_103254602 276
138 3300025942 Ga0207689_10002542 Ga0207689_1000254216 276
139 3300025961 Ga0207712_10021994 Ga0207712_100219944 276
140 3300025972 Ga0207668_10296636 Ga0207668_102966362 276
141 3300026023 Ga0207677_10315940 Ga0207677_103159402 276
142 3300026035 Ga0207703_10025909 Ga0207703_100259094 276
143 3300026088 Ga0207641_10000152 Ga0207641_100001523 276
144 3300026088 Ga0207641_10265268 Ga0207641_102652682 276
145 3300026095 Ga0207676_10029162 Ga0207676_100291622 276
146 3300026142 Ga0207698_10006207 Ga0207698_100062074 276
147 3300028381 Ga0268264_10002106 Ga0268264_1000210615 276
148 3300035170 Ga0373943_0111542 Ga0373943_0111542_115_948 276
149 3300047320 Ga0495672_0032290 Ga0495672_0032290_726_1556 276
150 3300050507 nmdc:mga05p37_233428_c1 nmdc:mga05p37_233428_c1_111_941 276
151 3300050512 nmdc:mga0n895_374404_c1 nmdc:mga0n895_374404_c1_408_1253 276
152 iso_pu_bacteria 2857618242 2857619197 276
153 3300005288 Ga0065714_10066692 Ga0065714_100666922 277
154 3300005539 Ga0068853_100006260 Ga0068853_1000062609 277
155 3300005539 Ga0068853_100015921 Ga0068853_1000159216 277
156 3300005616 Ga0068852_100231573 Ga0068852_1002315732 277
157 3300009093 Ga0105240_10000117 Ga0105240_10000117164 277
158 3300009093 Ga0105240_10000119 Ga0105240_10000119149 277
159 3300009094 Ga0111539_10031477 Ga0111539_100314773 277
160 3300009174 Ga0105241_10116039 Ga0105241_101160393 277
161 3300009551 Ga0105238_10274342 Ga0105238_102743422 277
162 3300010375 Ga0105239_10000097 Ga0105239_10000097125 277
163 3300025913 Ga0207695_10000077 Ga0207695_10000077114 277
164 3300025913 Ga0207695_10000139 Ga0207695_1000013955 277
165 3300026041 Ga0207639_10040187 Ga0207639_100401871 277
166 3300026041 Ga0207639_10110399 Ga0207639_101103992 277
167 3300026142 Ga0207698_10246516 Ga0207698_102465162 277
168 3300027907 Ga0207428_10193037 Ga0207428_101930372 277
169 3300044712 Ga0453684_0290434 Ga0453684_0290434_416_1249 277
170 3300046507 Ga0495606_0014388 Ga0495606_0014388_1769_2671 277
171 3300050511 nmdc:mga08y16_107726_c1 nmdc:mga08y16_107726_c1_1550_2386 277
172 3300053129 Ga0500628_067624 Ga0500628_067624_10_843 277
173 3300053153 Ga0500616_0024818 Ga0500616_0024818_1668_2519 277
174 3300001989 JGI24739J22299_10001869 JGI24739J22299_100018692 278
175 3300001989 JGI24739J22299_10011597 JGI24739J22299_100115972 278
176 3300001990 JGI24737J22298_10000332 JGI24737J22298_1000033210 278
177 3300002067 JGI24735J21928_10000001 JGI24735J21928_1000000183 278
178 3300003316 rootH1_10071129 rootH1_100711291 278
179 3300003322 rootL2_10074832 rootL2_100748323 278
180 3300003323 rootH1_10134428 rootH1_101344282 278
181 3300005289 Ga0065704_10139369 Ga0065704_101393692 278
182 3300005539 Ga0068853_100138041 Ga0068853_1001380412 278
183 3300005545 Ga0070695_100280450 Ga0070695_1002804501 278
184 3300005616 Ga0068852_100346990 Ga0068852_1003469902 278
185 3300005617 Ga0068859_100002589 Ga0068859_1000025898 278
186 3300006237 Ga0097621_100012793 Ga0097621_1000127936 278
187 3300006931 Ga0097620_100002589 Ga0097620_10000258912 278
188 3300010375 Ga0105239_10033437 Ga0105239_100334377 278
189 3300013102 Ga0157371_10018388 Ga0157371_100183882 278
190 3300013104 Ga0157370_10091720 Ga0157370_100917202 278
191 3300013105 Ga0157369_10241613 Ga0157369_102416131 278
192 3300013306 Ga0163162_10002966 Ga0163162_100029661 278
193 3300013307 Ga0157372_10005473 Ga0157372_1000547311 278
194 3300013307 Ga0157372_10010485 Ga0157372_100104854 278
195 3300014326 Ga0157380_10001198 Ga0157380_1000119810 278
196 3300025904 Ga0207647_10125197 Ga0207647_101251972 278
197 3300025938 Ga0207704_10097387 Ga0207704_100973873 278
198 3300028794 Ga0307515_10000010 Ga0307515_10000010222 278
199 3300028794 Ga0307515_10219520 Ga0307515_102195202 278
200 3300031911 Ga0307412_10016531 Ga0307412_100165314 278
201 3300039450 Ga0436363_0785668 Ga0436363_0785668_58_897 278
202 3300041512 Ga0451853_0673184 Ga0451853_0673184_31_1005 278
203 3300042876 Ga0451577_0017168 Ga0451577_0017168_3489_4328 278
204 3300042876 Ga0451577_0587353 Ga0451577_0587353_64_903 278
205 3300046471 Ga0495650_0000013 Ga0495650_0000013_368495_369382 278
206 3300046492 Ga0495585_0000141 Ga0495585_0000141_72620_73459 278
207 3300046506 Ga0495583_0159432 Ga0495583_0159432_23_910 278
208 3300046507 Ga0495606_0000010 Ga0495606_0000010_218392_219279 278
209 3300046507 Ga0495606_0062422 Ga0495606_0062422_1353_2192 278
210 3300046512 Ga0495610_0070542 Ga0495610_0070542_436_1275 278
211 3300046524 Ga0495648_0122936 Ga0495648_0122936_101_937 278
212 3300046558 Ga0495633_0034089 Ga0495633_0034089_220_1059 278
213 3300046660 Ga0495625_0000100 Ga0495625_0000100_1838_2725 278
214 3300046665 Ga0495661_0072721 Ga0495661_0072721_463_1350 278
215 3300046694 Ga0495649_0000002 Ga0495649_0000002_117779_118666 278
216 3300047472 Ga0495686_0047043 Ga0495686_0047043_375_1214 278
217 3300049743 Ga0501081_0197367 Ga0501081_0197367_137_1000 278
218 3300050493 nmdc:mga0k408_21133_c1 nmdc:mga0k408_21133_c1_18_857 278
219 3300053116 Ga0500592_000725 Ga0500592_000725_4151_4990 278
220 3300053157 Ga0500624_000483 Ga0500624_000483_8091_8927 278
221 3300003354 JGI25160J50197_1000193 JGI25160J50197_10001934 279
222 3300005288 Ga0065714_10093993 Ga0065714_100939931 279
223 3300005458 Ga0070681_10405097 Ga0070681_104050972 279
224 3300005535 Ga0070684_100077934 Ga0070684_1000779342 279
225 3300005564 Ga0070664_100153479 Ga0070664_1001534793 279
226 3300013308 Ga0157375_10164714 Ga0157375_101647141 279
227 3300025302 Ga0207426_1000026 Ga0207426_1000026254 279
228 3300025912 Ga0207707_10048091 Ga0207707_100480913 279
229 3300031251 Ga0265327_10000239 Ga0265327_1000023980 279
230 3300031824 Ga0307413_10000058 Ga0307413_1000005820 279
231 3300032005 Ga0307411_10000005 Ga0307411_1000000556 279
232 3300033180 Ga0307510_10122979 Ga0307510_101229792 279
233 3300041407 Ga0439447_003968 Ga0439447_003968_2295_3137 279
234 3300041494 Ga0451837_1011640 Ga0451837_1011640_239_1162 279
235 3300049763 Ga0501266_000007 Ga0501266_000007_177648_178490 279
236 3300053134 Ga0500658_0000013 Ga0500658_0000013_60397_61239 279
237 2162886007 SwRhRL2b_contig_1496964 SwRhRL2b_0604.00000810 281
238 3300005289 Ga0065704_10070178 Ga0065704_1007017822 281

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11716

MDMPI_N

Mycothiol maleylpyruvate isomerase N-terminal domain

60

206

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8af2-assembly2.cif.gz_B human sterol carrier protein with unnatural amino acid 2,2'-bipyridine alanine incorporated at position 111 0.7867 198 272
6z1x-assembly1.cif.gz_A crystal structure of human steroid carrier protein sl (scp-2l) mutant v83c 0.7462 188 273
6z1w-assembly1.cif.gz_A crystal structure of human steroid carrier protein sl (scp-2l) mutant a100c 0.746 188 273
8af3-assembly1.cif.gz_A sterol carrier protein artifical metalloenzyme incorporating q111c mutation coupled to 2,2'-bipyridine 0.7439 188 272
1ikt-assembly1.cif.gz_A liganded sterol carrier protein type 2 (scp-2) like domain of human multifunctional enzyme type 2 (mfe-2) 0.7383 188 273
ID Description Score Start End Superfamily
af_P64599_56_138_3.30.1050.10 Alpha Beta;2-Layer Sandwich;Nonspecific Lipid-transfer Protein; Chain A;SCP2 sterol-binding domain 0.7933 201 274 3.30.1050.10
af_P9WM91_7_150_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7878 11 162 1.20.120.450
af_O05777_178_274_3.30.1050.10 Alpha Beta;2-Layer Sandwich;Nonspecific Lipid-transfer Protein; Chain A;SCP2 sterol-binding domain 0.7854 180 270 3.30.1050.10
af_P9WM91_7_150_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7729 11 162 1.20.120.450
af_O05777_10_164_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7668 4 163 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A4Q1CJ88-F1-model_v4 Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein 0.9907 6 281 GO:0046872
AF-A0A2W0B427-F1-model_v4 Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein 0.9897 4 281 GO:0046872
AF-A0A7G7G2X6-F1-model_v4 Maleylpyruvate isomerase N-terminal domain-containing protein 0.9894 9 281 GO:0016853
GO:0046872
AF-A0A1H6X0W3-F1-model_v4 TIGR03083 family protein 0.9891 8 281 GO:0046872
AF-A0A2W0C1T5-F1-model_v4 Mycothiol-dependent maleylpyruvate isomerase metal-binding domain-containing protein 0.9875 4 281 GO:0046872

Feature Viewer

pLDDT pTM Quality
93.47 0.9 High
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Predicted Structure (AlphaFold2)

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