F351154

General Info

Members Datasets Scaffolds Average Seq Length
238 198 476 649

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0000161|Ga0395905_0000161_69442_71562
Length 706
Sequence MAQADSPTKWPWRDALRPTHGTHTRVHMGVPVAAGTPYVERGDADPPWYDTLAENALAIVLGPLQRRWASSPRRLRHIVALTEQWDERLRALSDAHLQQQARSLRPRLRQAGFTPALSAESFALVREAAARTMGRRHYPSQLMAGYAMLQGRLAEMATGEGKTFAATLPASTVALMGLPVHVVTVNDYLAERDAEEMAPLYTFLGLDVGVVTQEMKRPQRRQAYARAITYCTNKDLTFDYLRDRISRHGRVSALHLSLGRLNDSLSDSQEDDEGLVLRGLHFAIVDEADSVFIDEARTPLILSAPGEAEQLRTRCEQALGLAATLVEGEHYVHNAFQRSVSLREAGRAHITAQAQHLLQAPPGETIAPALIDVWGSVRAREELITQALNALHVYELDVHYVVFDGKVQIVDESTGRIMPDRSWERGLHQLIETKEGCELTTPRDTLARLTYQRLFRRYLRLSGMSGTAMEAAGEIQSVYRLPVARIPLHQPSRRVYLPMTMCGTQDEKWQRVAEVAARLQAQGRPVLIGTRSVGASERCSQVLGERGIAHALLNAKQDRAEAEVVAAAGQAGRVTVATNMAGRGTDIRPDDAVASLGGLHVILTEFHESSRVDRQLFGRCARQGDPGSCEAIVALDDEIFTVCAPWATAWLRRMRASSGAVPAWAGQLLRLLAQRSAESRNAQSRAHNMKHDRRLHQLLAFSGRGE

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
63 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
108 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
109 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
110 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
118 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
119 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
120 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
121 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
122 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
123 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
124 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
135 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
140 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
141 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
147 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
148 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
149 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
150 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
151 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
152 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
153 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
174 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
181 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
182 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
188 2734482264 Dyella sp. AD052 Isolate Unclassified
189 2739367700 Dyella sp. YR388 Isolate Unclassified
190 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
191 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
192 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
193 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
194 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
195 2919085039 Luteibacter sp. 1214 Isolate Unclassified
196 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
197 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
198 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.96
Metatranscriptomes 0
Isolates 5.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.14
Nodule 2.52
Rhizoplane 4.2
Rhizosphere 78.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0000161 3300037471 Bacteria 111197
2 JGI25153J46596_10001141 3300003215 Bacteria 16084
3 rootL2_10002962 3300003322 Bacteria 86985
4 JGI25160J50197_1000143 3300003354 Bacteria 63952
5 Ga0055539_1000987 3300003752 Bacteria 6218
6 Ga0055533_1000832 3300003756 Bacteria 9512
7 Ga0055531_10000021 3300003794 Bacteria 167213
8 Ga0065165_1001280 3300005262 Bacteria 28374
9 Ga0070658_10001844 3300005327 Bacteria 17844
10 Ga0070683_100022744 3300005329 Bacteria 5607
11 Ga0070680_100044854 3300005336 Bacteria 3593
12 Ga0070660_100044562 3300005339 Bacteria 3394
13 Ga0070689_100020512 3300005340 Bacteria 4905
14 Ga0070689_100044944 3300005340 Bacteria 3399
15 Ga0070691_10017593 3300005341 Bacteria 3289
16 Ga0070661_100010043 3300005344 Bacteria 6571
17 Ga0070669_100038291 3300005353 Bacteria 3481
18 Ga0070675_100000292 3300005354 Bacteria 33370
19 Ga0070675_100007558 3300005354 Bacteria 8407
20 Ga0070675_100009667 3300005354 Bacteria 7508
21 Ga0070675_100014410 3300005354 Bacteria 6233
22 Ga0070671_100001918 3300005355 Bacteria 15929
23 Ga0070674_100004548 3300005356 Bacteria 7913
24 Ga0070688_100040166 3300005365 Bacteria 2866
25 Ga0070688_100048699 3300005365 Bacteria 2634
26 Ga0070659_100002396 3300005366 Bacteria 13312
27 Ga0070667_100031636 3300005367 Bacteria 4411
28 Ga0070709_10020572 3300005434 Bacteria 3830
29 Ga0070711_100000414 3300005439 Bacteria 22099
30 Ga0070694_100006562 3300005444 Bacteria 7067
31 Ga0070681_10098850 3300005458 Bacteria 2864
32 Ga0070706_100021007 3300005467 Bacteria 6010
33 Ga0070699_100014482 3300005518 Bacteria 6782
34 Ga0070679_100139022 3300005530 Bacteria 2409
35 Ga0070684_100045693 3300005535 Bacteria 3792
36 Ga0070697_100004470 3300005536 Bacteria 10755
37 Ga0070672_100001653 3300005543 Bacteria 13886
38 Ga0070695_100007091 3300005545 Bacteria 6642
39 Ga0070665_100000228 3300005548 Bacteria 93402
40 Ga0068855_100001251 3300005563 Bacteria 31554
41 Ga0068854_100000013 3300005578 Bacteria 165500
42 Ga0068859_100000473 3300005617 Bacteria 39708
43 Ga0068859_100011597 3300005617 Bacteria 8863
44 Ga0068859_100041026 3300005617 Bacteria 4649
45 Ga0068859_100147251 3300005617 Bacteria 2430
46 Ga0068851_10006952 3300005834 Bacteria 5187
47 Ga0068863_100000242 3300005841 Bacteria 58222
48 Ga0068858_100004810 3300005842 Bacteria 13232
49 Ga0068858_100005247 3300005842 Bacteria 12696
50 Ga0070716_100046322 3300006173 Bacteria 2446
51 Ga0070712_100005473 3300006175 Bacteria 7862
52 Ga0075370_10014379 3300006353 Bacteria 4221
53 Ga0075436_100000043 3300006914 Bacteria 77110
54 Ga0097620_100000473 3300006931 Bacteria 39708
55 Ga0097620_100011598 3300006931 Bacteria 8863
56 Ga0097620_100041026 3300006931 Bacteria 4649
57 Ga0097620_100147251 3300006931 Bacteria 2430
58 Ga0105240_10002466 3300009093 Bacteria 29729
59 Ga0105240_10006885 3300009093 Bacteria 16614
60 Ga0105240_10058623 3300009093 Bacteria 4807
61 Ga0105245_10050090 3300009098 Bacteria 3742
62 Ga0105247_10011404 3300009101 Bacteria 5360
63 Ga0114129_10037157 3300009147 Bacteria 6876
64 Ga0105242_10061436 3300009176 Bacteria 3090
65 Ga0105248_10000530 3300009177 Bacteria 43488
66 Ga0105248_10015810 3300009177 Bacteria 8318
67 Ga0105237_10034228 3300009545 Bacteria 5145
68 Ga0105238_10000178 3300009551 Bacteria 69458
69 Ga0105239_10033824 3300010375 Bacteria 5612
70 Ga0105239_10192946 3300010375 Bacteria 2280
71 Ga0157370_10000182 3300013104 Bacteria 79172
72 Ga0171462_1021 3300013250 Bacteria 141297
73 Ga0163162_10000110 3300013306 Bacteria 73989
74 Ga0157375_10000876 3300013308 Bacteria 26145
75 Ga0163163_10010604 3300014325 Bacteria 8299
76 Ga0182008_10016351 3300014497 Bacteria 3855
77 Ga0157379_10000084 3300014968 Bacteria 62328
78 Ga0182006_1000049 3300015261 Bacteria 184514
79 Ga0209674_100907 3300025226 Bacteria 9564
80 Ga0209677_100985 3300025253 Bacteria 13752
81 Ga0209758_1000697 3300025297 Bacteria 49837
82 Ga0209050_1008609 3300025298 Bacteria 5401
83 Ga0207426_1000781 3300025302 Bacteria 34865
84 Ga0209257_1000032 3300025304 Bacteria 680354
85 Ga0207699_10003207 3300025906 Bacteria 7789
86 Ga0207705_10001606 3300025909 Bacteria 17949
87 Ga0207707_10001153 3300025912 Bacteria 25076
88 Ga0207695_10006931 3300025913 Bacteria 14559
89 Ga0207695_10018696 3300025913 Bacteria 8002
90 Ga0207695_10068058 3300025913 Bacteria 3649
91 Ga0207695_10069177 3300025913 Bacteria 3613
92 Ga0207671_10001436 3300025914 Bacteria 27619
93 Ga0207693_10001434 3300025915 Bacteria 21140
94 Ga0207663_10005171 3300025916 Bacteria 6564
95 Ga0207660_10010844 3300025917 Bacteria 5924
96 Ga0207662_10033562 3300025918 Bacteria 2992
97 Ga0207657_10000939 3300025919 Bacteria 30838
98 Ga0207694_10000187 3300025924 Bacteria 62967
99 Ga0207659_10004240 3300025926 Bacteria 8670
100 Ga0207644_10028893 3300025931 Bacteria 3843
101 Ga0207690_10008003 3300025932 Bacteria 6277
102 Ga0207686_10045467 3300025934 Bacteria 2701
103 Ga0207669_10002236 3300025937 Bacteria 8221
104 Ga0207665_10065189 3300025939 Bacteria 2476
105 Ga0207691_10000174 3300025940 Bacteria 60256
106 Ga0207711_10016690 3300025941 Bacteria 6097
107 Ga0207661_10034014 3300025944 Bacteria 3960
108 Ga0207679_10002023 3300025945 Bacteria 12580
109 Ga0207667_10000054 3300025949 Bacteria 226445
110 Ga0207667_10010936 3300025949 Bacteria 10576
111 Ga0207667_10101761 3300025949 Bacteria 2964
112 Ga0207651_10000736 3300025960 Bacteria 14023
113 Ga0207640_10000044 3300025981 Bacteria 102612
114 Ga0207658_10029689 3300025986 Bacteria 3864
115 Ga0207703_10007996 3300026035 Bacteria 8356
116 Ga0207639_10019492 3300026041 Bacteria 4839
117 Ga0207641_10001228 3300026088 Bacteria 25690
118 Ga0207641_10001276 3300026088 Bacteria 25069
119 Ga0207641_10098423 3300026088 Bacteria 2572
120 Ga0207683_10021944 3300026121 Bacteria 5477
121 Ga0268266_10000051 3300028379 Bacteria 296231
122 Ga0268266_10000231 3300028379 Bacteria 96139
123 Ga0268264_10008582 3300028381 Bacteria 8490
124 Ga0307515_10000944 3300028794 Bacteria 66492
125 Ga0307515_10041334 3300028794 Bacteria 7252
126 Ga0265328_10009117 3300031239 Bacteria 4050
127 Ga0307513_10037912 3300031456 Bacteria 5358
128 Ga0307514_10010055 3300031649 Bacteria 7919
129 Ga0316579_10000543 3300031691 Bacteria 12457
130 Ga0316576_10017715 3300031727 Bacteria 4846
131 Ga0316578_10013225 3300031728 Bacteria 4370
132 Ga0316577_10007641 3300031733 Bacteria 5769
133 Ga0316585_10012456 3300032137 Bacteria 2520
134 Ga0307510_10029602 3300033180 Bacteria 6228
135 Ga0373955_0004345 3300035172 Bacteria 6265
136 Ga0373931_0004683 3300035691 Bacteria 6260
137 Ga0373933_0040474 3300035724 Bacteria 2746
138 Ga0373937_0003230 3300036401 Bacteria 13660
139 Ga0316584_0018244 3300036712 Bacteria 5060
140 Ga0395899_0001158 3300037312 Bacteria 23306
141 Ga0395898_0005496 3300037466 Bacteria 13687
142 Ga0395905_0002264 3300037471 Bacteria 21621
143 Ga0400484_07858 3300038725 Bacteria 4408
144 Ga0400490_18295 3300038726 Bacteria 112507
145 Ga0451855_0763995 3300041511 Bacteria 5370
146 Ga0450911_000045 3300042115 Bacteria 53204
147 Ga0450888_000111 3300042126 Bacteria 6478
148 Ga0450891_000288 3300042129 Bacteria 5143
149 Ga0450892_000257 3300042130 Bacteria 6325
150 Ga0450893_0000088 3300042532 Bacteria 10101
151 Ga0451577_0000162 3300042876 Bacteria 145994
152 Ga0466972_0038043 3300044658 Bacteria 2350
153 Ga0466965_0004173 3300044683 Bacteria 6420
154 Ga0466966_0004681 3300044684 Bacteria 9006
155 Ga0466966_0004741 3300044684 Bacteria 8949
156 Ga0466966_0016858 3300044684 Bacteria 4828
157 Ga0466961_0001861 3300044693 Bacteria 13097
158 Ga0466964_0005748 3300044706 Bacteria 4618
159 Ga0453684_0000524 3300044712 Bacteria 146655
160 Ga0466970_0000828 3300044765 Bacteria 14868
161 Ga0466959_0016953 3300045049 Bacteria 5332
162 Ga0466958_0008473 3300045836 Bacteria 5708
163 Ga0495651_0007262 3300046462 Bacteria 8468
164 Ga0495650_0000027 3300046471 Bacteria 475071
165 Ga0495650_0025889 3300046471 Bacteria 2739
166 Ga0495584_0007219 3300046491 Bacteria 5798
167 Ga0495584_0021604 3300046491 Bacteria 3268
168 Ga0495585_0000001 3300046492 Bacteria 609804
169 Ga0495585_0001843 3300046492 Bacteria 16030
170 Ga0495585_0004901 3300046492 Bacteria 8575
171 Ga0495606_0000150 3300046507 Bacteria 119726
172 Ga0495606_0041930 3300046507 Bacteria 3066
173 Ga0495616_0000001 3300046513 Bacteria 780061
174 Ga0495631_0000078 3300046518 Bacteria 63148
175 Ga0495631_0001840 3300046518 Bacteria 12514
176 Ga0495633_0003870 3300046558 Bacteria 9777
177 Ga0495668_0012322 3300046616 Bacteria 5073
178 Ga0495611_0011801 3300046648 Bacteria 3707
179 Ga0495625_0078949 3300046660 Bacteria 2297
180 Ga0495661_0000104 3300046665 Bacteria 101211
181 Ga0495661_0005469 3300046665 Bacteria 9012
182 Ga0495670_0002251 3300046691 Bacteria 9517
183 Ga0495660_0000009 3300046810 Bacteria 427395
184 Ga0495674_0065254 3300047319 Bacteria 3163
185 Ga0495683_0007174 3300047323 Bacteria 6046
186 Ga0495677_0001567 3300047445 Bacteria 9225
187 Ga0495673_0000001 3300047469 Bacteria 1630730
188 Ga0495673_0004343 3300047469 Bacteria 8910
189 Ga0495681_0008274 3300047470 Bacteria 6535
190 Ga0495686_0013518 3300047472 Bacteria 5661
191 Ga0495615_0000485 3300048090 Bacteria 5711
192 Ga0496102_0123274 3300048905 Bacteria 2421
193 Ga0496105_0085216 3300048908 Bacteria 2610
194 Ga0496106_0000195 3300048909 Bacteria 42735
195 Ga0496107_0036639 3300048910 Bacteria 3518
196 Ga0496109_0112798 3300048912 Bacteria 2528
197 Ga0496110_0003115 3300048913 Bacteria 12596
198 Ga0496111_0006999 3300048914 Bacteria 7363
199 Ga0496112_0017220 3300048915 Bacteria 6784
200 Ga0496112_0026533 3300048915 Bacteria 5575
201 Ga0496115_0091712 3300048918 Bacteria 2483
202 Ga0496121_0000474 3300048924 Bacteria 78201
203 Ga0496125_0015710 3300048928 Bacteria 7302
204 Ga0496125_0057024 3300048928 Bacteria 3167
205 Ga0496126_0014198 3300048929 Bacteria 8060
206 Ga0495682_0000106 3300049460 Bacteria 74069
207 Ga0495682_0000129 3300049460 Bacteria 65692
208 Ga0501033_0000678 3300049570 Bacteria 31446
209 Ga0501038_0022073 3300049574 Bacteria 5708
210 Ga0501039_0006728 3300049575 Bacteria 8748
211 Ga0501040_0011764 3300049576 Bacteria 5725
212 Ga0501068_0010273 3300049584 Bacteria 5255
213 Ga0501076_0071715 3300049592 Bacteria 2772
214 Ga0501079_0034138 3300049741 Bacteria 3914
215 Ga0501035_0067830 3300049822 Bacteria 3164
216 Ga0501035_0070074 3300049822 Bacteria 3107
217 nmdc:mga07m45_14122_c1 3300050496 Bacteria 4248
218 nmdc:mga06r32_146294_c1 3300050510 Bacteria 2340
219 nmdc:mga08x19_521_c1 3300050514 Bacteria 25602
220 Ga0500562_000917 3300053108 Bacteria 7154
221 Ga0500568_0012566 3300053139 Bacteria 3887
222 Ga0500616_0014495 3300053153 Bacteria 4529
223 Ga0501084_0057440 3300054114 Bacteria 3256
224 Ga0501082_0034354 3300060353 Bacteria 4373
225 Ga0466962_0000843 3300061719 Bacteria 13837
226 Ga0530510_0029220 3300061734 Bacteria 3955
227 2515638163 2515154113 Bacteria 7807172
228 2735836898 2734482264 Unclassified 5014763
229 2739731201 2739367700 Bacteria 4747630
230 2841960153 2841957949 Bacteria 8652217
231 2895398722 2895395659 Bacteria 3983269
232 2904698507 2904690495 Bacteria 9412302
233 2908762481 2908756301 Bacteria 8864324
234 2917704970 2917699015 Bacteria 7043791
235 2919085437 2919085039 Bacteria 4532964
236 2989396316 2989392574 Bacteria 4554005
237 3005600095 3005594810 Bacteria 8716512
238 3005720746 3005718088 Bacteria 8283608
239 Ga0395905_0000161
240 JGI25153J46596_10001141
241 rootL2_10002962
242 JGI25160J50197_1000143
243 Ga0055539_1000987
244 Ga0055533_1000832
245 Ga0055531_10000021
246 Ga0065165_1001280
247 Ga0070658_10001844
248 Ga0070683_100022744
249 Ga0070680_100044854
250 Ga0070660_100044562
251 Ga0070689_100020512
252 Ga0070689_100044944
253 Ga0070691_10017593
254 Ga0070661_100010043
255 Ga0070669_100038291
256 Ga0070675_100000292
257 Ga0070675_100007558
258 Ga0070675_100009667
259 Ga0070675_100014410
260 Ga0070671_100001918
261 Ga0070674_100004548
262 Ga0070688_100040166
263 Ga0070688_100048699
264 Ga0070659_100002396
265 Ga0070667_100031636
266 Ga0070709_10020572
267 Ga0070711_100000414
268 Ga0070694_100006562
269 Ga0070681_10098850
270 Ga0070706_100021007
271 Ga0070699_100014482
272 Ga0070679_100139022
273 Ga0070684_100045693
274 Ga0070697_100004470
275 Ga0070672_100001653
276 Ga0070695_100007091
277 Ga0070665_100000228
278 Ga0068855_100001251
279 Ga0068854_100000013
280 Ga0068859_100000473
281 Ga0068859_100011597
282 Ga0068859_100041026
283 Ga0068859_100147251
284 Ga0068851_10006952
285 Ga0068863_100000242
286 Ga0068858_100004810
287 Ga0068858_100005247
288 Ga0070716_100046322
289 Ga0070712_100005473
290 Ga0075370_10014379
291 Ga0075436_100000043
292 Ga0097620_100000473
293 Ga0097620_100011598
294 Ga0097620_100041026
295 Ga0097620_100147251
296 Ga0105240_10002466
297 Ga0105240_10006885
298 Ga0105240_10058623
299 Ga0105245_10050090
300 Ga0105247_10011404
301 Ga0114129_10037157
302 Ga0105242_10061436
303 Ga0105248_10000530
304 Ga0105248_10015810
305 Ga0105237_10034228
306 Ga0105238_10000178
307 Ga0105239_10033824
308 Ga0105239_10192946
309 Ga0157370_10000182
310 Ga0171462_1021
311 Ga0163162_10000110
312 Ga0157375_10000876
313 Ga0163163_10010604
314 Ga0182008_10016351
315 Ga0157379_10000084
316 Ga0182006_1000049
317 Ga0209674_100907
318 Ga0209677_100985
319 Ga0209758_1000697
320 Ga0209050_1008609
321 Ga0207426_1000781
322 Ga0209257_1000032
323 Ga0207699_10003207
324 Ga0207705_10001606
325 Ga0207707_10001153
326 Ga0207695_10006931
327 Ga0207695_10018696
328 Ga0207695_10068058
329 Ga0207695_10069177
330 Ga0207671_10001436
331 Ga0207693_10001434
332 Ga0207663_10005171
333 Ga0207660_10010844
334 Ga0207662_10033562
335 Ga0207657_10000939
336 Ga0207694_10000187
337 Ga0207659_10004240
338 Ga0207644_10028893
339 Ga0207690_10008003
340 Ga0207686_10045467
341 Ga0207669_10002236
342 Ga0207665_10065189
343 Ga0207691_10000174
344 Ga0207711_10016690
345 Ga0207661_10034014
346 Ga0207679_10002023
347 Ga0207667_10000054
348 Ga0207667_10010936
349 Ga0207667_10101761
350 Ga0207651_10000736
351 Ga0207640_10000044
352 Ga0207658_10029689
353 Ga0207703_10007996
354 Ga0207639_10019492
355 Ga0207641_10001228
356 Ga0207641_10001276
357 Ga0207641_10098423
358 Ga0207683_10021944
359 Ga0268266_10000051
360 Ga0268266_10000231
361 Ga0268264_10008582
362 Ga0307515_10000944
363 Ga0307515_10041334
364 Ga0265328_10009117
365 Ga0307513_10037912
366 Ga0307514_10010055
367 Ga0316579_10000543
368 Ga0316576_10017715
369 Ga0316578_10013225
370 Ga0316577_10007641
371 Ga0316585_10012456
372 Ga0307510_10029602
373 Ga0373955_0004345
374 Ga0373931_0004683
375 Ga0373933_0040474
376 Ga0373937_0003230
377 Ga0316584_0018244
378 Ga0395899_0001158
379 Ga0395898_0005496
380 Ga0395905_0002264
381 Ga0400484_07858
382 Ga0400490_18295
383 Ga0451855_0763995
384 Ga0450911_000045
385 Ga0450888_000111
386 Ga0450891_000288
387 Ga0450892_000257
388 Ga0450893_0000088
389 Ga0451577_0000162
390 Ga0466972_0038043
391 Ga0466965_0004173
392 Ga0466966_0004681
393 Ga0466966_0004741
394 Ga0466966_0016858
395 Ga0466961_0001861
396 Ga0466964_0005748
397 Ga0453684_0000524
398 Ga0466970_0000828
399 Ga0466959_0016953
400 Ga0466958_0008473
401 Ga0495651_0007262
402 Ga0495650_0000027
403 Ga0495650_0025889
404 Ga0495584_0007219
405 Ga0495584_0021604
406 Ga0495585_0000001
407 Ga0495585_0001843
408 Ga0495585_0004901
409 Ga0495606_0000150
410 Ga0495606_0041930
411 Ga0495616_0000001
412 Ga0495631_0000078
413 Ga0495631_0001840
414 Ga0495633_0003870
415 Ga0495668_0012322
416 Ga0495611_0011801
417 Ga0495625_0078949
418 Ga0495661_0000104
419 Ga0495661_0005469
420 Ga0495670_0002251
421 Ga0495660_0000009
422 Ga0495674_0065254
423 Ga0495683_0007174
424 Ga0495677_0001567
425 Ga0495673_0000001
426 Ga0495673_0004343
427 Ga0495681_0008274
428 Ga0495686_0013518
429 Ga0495615_0000485
430 Ga0496102_0123274
431 Ga0496105_0085216
432 Ga0496106_0000195
433 Ga0496107_0036639
434 Ga0496109_0112798
435 Ga0496110_0003115
436 Ga0496111_0006999
437 Ga0496112_0017220
438 Ga0496112_0026533
439 Ga0496115_0091712
440 Ga0496121_0000474
441 Ga0496125_0015710
442 Ga0496125_0057024
443 Ga0496126_0014198
444 Ga0495682_0000106
445 Ga0495682_0000129
446 Ga0501033_0000678
447 Ga0501038_0022073
448 Ga0501039_0006728
449 Ga0501040_0011764
450 Ga0501068_0010273
451 Ga0501076_0071715
452 Ga0501079_0034138
453 Ga0501035_0067830
454 Ga0501035_0070074
455 nmdc:mga07m45_14122_c1
456 nmdc:mga06r32_146294_c1
457 nmdc:mga08x19_521_c1
458 Ga0500562_000917
459 Ga0500568_0012566
460 Ga0500616_0014495
461 Ga0501084_0057440
462 Ga0501082_0034354
463 Ga0466962_0000843
464 Ga0530510_0029220
465 2515638163
466 2735836898
467 2739731201
468 2841960153
469 2895398722
470 2904698507
471 2908762481
472 2917704970
473 2919085437
474 2989396316
475 3005600095
476 3005720746

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07517

SecA_DEAD

SecA DEAD-like domain

63

476

0.97

PF21090

P-loop_SecA

SecA P-loop domain

492

591

0.96

PF21090

P-loop_SecA

SecA P-loop domain

588

656

0.92

PF01043

SecA_PP_bind

SecA preprotein cross-linking domain

312

432

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.885 53 603
1tf2-assembly1.cif.gz_A crystal structure of seca:adp in an open conformation from bacillus subtilis 0.8777 56 666
1tf5-assembly1.cif.gz_A crystal structure of seca in an open conformation from bacillus subtilis 0.8679 56 662
3jv2-assembly1.cif.gz_A crystal structure of b. subtilis seca with bound peptide 0.8674 56 662
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.8672 53 603
ID Description Score Start End Superfamily
1m74A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9407 455 619 3.40.50.300
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9295 52 454 3.40.50.300
3bxzB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.929 455 604 3.40.50.300
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9264 59 281 3.40.50.300
af_Q2FUW6_401_604_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9262 455 652 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A534ILX1-F1-model_v4 Preprotein translocase subunit SecA 0.9892 102 214 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
AF-A0A7G2M042-F1-model_v4 Preprotein translocase subunit SecA 0.9861 112 224 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952
AF-A0A2J0QRK2-F1-model_v4 deleted 0.9718 453 604
AF-A0A359MCE1-F1-model_v4 deleted 0.9706 441 621
AF-A0A352EE65-F1-model_v4 SecA family profile domain-containing protein 0.9666 488 579 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0031522
GO:0043952

Map