F351151

General Info

Members Datasets Scaffolds Average Seq Length
238 157 237 424

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0091790|Ga0395900_0091790_961_2343
Length 460
Sequence MDFGLTDDQREFRALCRRFATEVIRPVAAKHDAEESTPWEAIKAAREWGLNGIDHLQRLANDPDGQFSVIYAEELHWGCAGIALAITGSTLAAAGLASSGTPEQIARWVPECFGTGDEIKLGAYAVTEPQAGSDVKSLRTTAVRDGDEWVLNGTKVFITNGGIADVHVIVATVDPNLGHRGQASFVVPKGTLGLKQGKKESKLGIRASHTAEVLLEDCRVPLENLLGGMDKLERKLERARSGESSGRASNALATFELTRPVVGASAIGIAQAAYEWTLAYLDNGAGQDPLAGLLDESSTAGKPPLERQGIQQPLADVATEIEAARLLVQRASWMGRNGVPMTGGQGSMSKLKGGDVAMWATRTCMDLVGPFAQTTDYPLEKWFRDAKIYQLFEGTAEIQRLVISRMQAAEYRERLKEGVDIAAEALAAGRSSDGSGSGSRPSAAENGPGATSGDRAAAVS

Samples

Sample ID Description Type Environment
1 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
109 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.74
Metatranscriptomes 0.84
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.94
Nodule 0
Rhizoplane 7.98
Rhizosphere 87.82
Stem 0
Stem Tuber 0
Unclassified 1.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10000093 3300003373 Bacteria 12120
2 JGI25407J50210_10004436 3300003373 Bacteria 3413
3 Ga0070658_10020709 3300005327 Bacteria 5269
4 Ga0070658_10069927 3300005327 Bacteria 2873
5 Ga0070683_100122217 3300005329 Bacteria 2460
6 Ga0070683_100131285 3300005329 Bacteria 2370
7 Ga0070690_100003329 3300005330 Bacteria 8758
8 Ga0068869_100030862 3300005334 Bacteria 3766
9 Ga0070680_100011345 3300005336 Bacteria 6891
10 Ga0070682_100002644 3300005337 Bacteria 9899
11 Ga0070682_100022253 3300005337 Bacteria 3753
12 Ga0070660_100003887 3300005339 Bacteria 10322
13 Ga0070660_100048650 3300005339 Bacteria 3256
14 Ga0070661_100002952 3300005344 Bacteria 11732
15 Ga0070692_10014281 3300005345 Bacteria 3726
16 Ga0070692_10052602 3300005345 Bacteria 2122
17 Ga0070668_100010376 3300005347 Bacteria 6919
18 Ga0070675_100011055 3300005354 Bacteria 7065
19 Ga0070674_100001851 3300005356 Bacteria 11478
20 Ga0070659_100002906 3300005366 Bacteria 12203
21 Ga0070659_100036031 3300005366 Bacteria 3855
22 Ga0070700_100002016 3300005441 Bacteria 10317
23 Ga0070663_100010908 3300005455 Bacteria 5678
24 Ga0070662_100022067 3300005457 Bacteria 4353
25 Ga0070681_10063553 3300005458 Bacteria 3663
26 Ga0070681_10148865 3300005458 Bacteria 2269
27 Ga0070685_10059699 3300005466 Bacteria 2227
28 Ga0070698_100000095 3300005471 Bacteria 71018
29 Ga0070679_100174082 3300005530 Bacteria 2125
30 Ga0070679_100181579 3300005530 Bacteria 2076
31 Ga0070684_100011706 3300005535 Bacteria 6995
32 Ga0070684_100012750 3300005535 Bacteria 6748
33 Ga0070684_100110860 3300005535 Bacteria 2460
34 Ga0070695_100086443 3300005545 Bacteria 2084
35 Ga0070696_100008396 3300005546 Bacteria 6910
36 Ga0070664_100005674 3300005564 Bacteria 10048
37 Ga0068857_100031056 3300005577 Bacteria 4721
38 Ga0068854_100005733 3300005578 Bacteria 7853
39 Ga0068852_100004063 3300005616 Bacteria 10294
40 Ga0068866_10039206 3300005718 Bacteria 2338
41 Ga0068861_100075820 3300005719 Bacteria 2619
42 Ga0068861_100121668 3300005719 Bacteria 2106
43 Ga0068860_100109507 3300005843 Bacteria 2640
44 Ga0081455_10025854 3300005937 Bacteria 5410
45 Ga0081455_10032616 3300005937 Bacteria 4691
46 Ga0081538_10000045 3300005981 Bacteria 114622
47 Ga0081538_10000273 3300005981 Bacteria 59166
48 Ga0081538_10000750 3300005981 Bacteria 35412
49 Ga0081538_10000963 3300005981 Bacteria 30702
50 Ga0081538_10001296 3300005981 Bacteria 25915
51 Ga0081538_10002876 3300005981 Bacteria 16445
52 Ga0081538_10011579 3300005981 Bacteria 7136
53 Ga0081538_10011642 3300005981 Bacteria 7111
54 Ga0081538_10013509 3300005981 Bacteria 6458
55 Ga0081538_10015877 3300005981 Bacteria 5805
56 Ga0081538_10027252 3300005981 Bacteria 3968
57 Ga0081538_10034048 3300005981 Bacteria 3377
58 Ga0081538_10089037 3300005981 Bacteria 1604
59 Ga0070717_10007506 3300006028 Bacteria 8102
60 Ga0075365_10033364 3300006038 Bacteria 3316
61 Ga0070712_100000153 3300006175 Bacteria 36937
62 Ga0075428_100150341 3300006844 Bacteria 2530
63 Ga0075428_100164916 3300006844 Bacteria 2404
64 Ga0075428_100366250 3300006844 Bacteria 1546
65 Ga0075430_100007186 3300006846 Bacteria 9393
66 Ga0075430_100008745 3300006846 Bacteria 8546
67 Ga0075430_100165611 3300006846 Bacteria 1839
68 Ga0075431_100000747 3300006847 Bacteria 28086
69 Ga0075431_100023546 3300006847 Bacteria 6302
70 Ga0075433_10044827 3300006852 Bacteria 3843
71 Ga0075433_10055484 3300006852 Bacteria 3459
72 Ga0075434_100160440 3300006871 Bacteria 2268
73 Ga0075434_100191662 3300006871 Bacteria 2065
74 Ga0075429_100013499 3300006880 Bacteria 7087
75 Ga0075429_100177687 3300006880 Bacteria 1865
76 Ga0075429_100183282 3300006880 Bacteria 1835
77 Ga0068865_100012407 3300006881 Bacteria 5362
78 Ga0105240_10016359 3300009093 Bacteria 10045
79 Ga0111539_10005154 3300009094 Bacteria 16938
80 Ga0111539_10137801 3300009094 Bacteria 2858
81 Ga0105245_10000089 3300009098 Bacteria 92068
82 Ga0105245_10000236 3300009098 Bacteria 52639
83 Ga0105247_10086633 3300009101 Bacteria 1982
84 Ga0114129_10016879 3300009147 Bacteria 10394
85 Ga0114129_10054111 3300009147 Bacteria 5628
86 Ga0114129_10105256 3300009147 Bacteria 3899
87 Ga0114129_10201754 3300009147 Bacteria 2693
88 Ga0105243_10033594 3300009148 Bacteria 3967
89 Ga0105243_10048123 3300009148 Bacteria 3360
90 Ga0105241_10116473 3300009174 Bacteria 2146
91 Ga0105242_10113574 3300009176 Bacteria 2313
92 Ga0105238_10085858 3300009551 Bacteria 3135
93 Ga0105249_10013293 3300009553 Bacteria 7267
94 Ga0105249_10151441 3300009553 Bacteria 2233
95 Ga0105239_10245889 3300010375 Bacteria 2008
96 Ga0157370_10047135 3300013104 Bacteria 4132
97 Ga0157369_10117471 3300013105 Bacteria 2823
98 Ga0157378_10027476 3300013297 Bacteria 5021
99 Ga0163162_10034023 3300013306 Bacteria 5069
100 Ga0157372_10069559 3300013307 Bacteria 3959
101 Ga0157377_10005583 3300014745 Bacteria 5925
102 Ga0157377_10075379 3300014745 Bacteria 1959
103 Ga0157379_10060245 3300014968 Bacteria 3393
104 Ga0157376_10009871 3300014969 Bacteria 6960
105 Ga0163161_10000240 3300017792 Bacteria 49520
106 Ga0206356_11268940 3300020070 Bacteria 3095
107 Ga0206353_11988960 3300020082 Bacteria 3553
108 Ga0207642_10085322 3300025899 Bacteria 1545
109 Ga0207710_10052893 3300025900 Bacteria 1826
110 Ga0207688_10001871 3300025901 Bacteria 11271
111 Ga0207643_10020002 3300025908 Bacteria 3671
112 Ga0207705_10111622 3300025909 Bacteria 2021
113 Ga0207707_10007012 3300025912 Bacteria 9828
114 Ga0207707_10115197 3300025912 Bacteria 2349
115 Ga0207695_10071179 3300025913 Bacteria 3552
116 Ga0207693_10000487 3300025915 Bacteria 35985
117 Ga0207660_10011310 3300025917 Bacteria 5804
118 Ga0207657_10007993 3300025919 Bacteria 10785
119 Ga0207657_10008020 3300025919 Bacteria 10768
120 Ga0207681_10155390 3300025923 Bacteria 1719
121 Ga0207694_10089809 3300025924 Bacteria 2424
122 Ga0207659_10030370 3300025926 Bacteria 3691
123 Ga0207687_10000029 3300025927 Bacteria 156754
124 Ga0207687_10108600 3300025927 Bacteria 2055
125 Ga0207690_10013290 3300025932 Bacteria 4945
126 Ga0207690_10028134 3300025932 Bacteria 3561
127 Ga0207706_10000930 3300025933 Bacteria 30023
128 Ga0207706_10006613 3300025933 Bacteria 10734
129 Ga0207709_10031711 3300025935 Bacteria 3089
130 Ga0207669_10031373 3300025937 Bacteria 2968
131 Ga0207669_10043994 3300025937 Bacteria 2619
132 Ga0207691_10055865 3300025940 Bacteria 3598
133 Ga0207691_10101847 3300025940 Bacteria 2562
134 Ga0207661_10000800 3300025944 Bacteria 20530
135 Ga0207661_10148793 3300025944 Bacteria 2022
136 Ga0207679_10011261 3300025945 Bacteria 5782
137 Ga0207712_10023103 3300025961 Bacteria 4100
138 Ga0207703_10096371 3300026035 Bacteria 2498
139 Ga0207678_10003309 3300026067 Bacteria 14530
140 Ga0207708_10018236 3300026075 Bacteria 5283
141 Ga0207708_10135723 3300026075 Bacteria 1927
142 Ga0207702_10215447 3300026078 Bacteria 1787
143 Ga0207648_10019850 3300026089 Bacteria 6065
144 Ga0207648_10049168 3300026089 Bacteria 3691
145 Ga0207648_10103911 3300026089 Bacteria 2491
146 Ga0207674_10052852 3300026116 Bacteria 4142
147 Ga0207675_100005061 3300026118 Bacteria 12690
148 Ga0207675_100047766 3300026118 Bacteria 3995
149 Ga0207683_10007651 3300026121 Bacteria 9250
150 Ga0207683_10177553 3300026121 Bacteria 1930
151 Ga0207698_10036032 3300026142 Bacteria 3626
152 Ga0207428_10055765 3300027907 Bacteria 3141
153 Ga0307515_10003491 3300028794 Bacteria 33042
154 Ga0307509_10221094 3300031507 Bacteria 1707
155 Ga0307508_10130934 3300031616 Bacteria 2112
156 Ga0307406_10105332 3300031901 Bacteria 1930
157 Ga0307407_10008836 3300031903 Bacteria 4654
158 Ga0307407_10088788 3300031903 Bacteria 1889
159 Ga0307409_100087089 3300031995 Bacteria 2544
160 Ga0307416_100048702 3300032002 Bacteria 3364
161 Ga0307414_10128793 3300032004 Bacteria 1961
162 Ga0307415_100015014 3300032126 Bacteria 4573
163 Ga0307415_100114523 3300032126 Bacteria 2008
164 Ga0307415_100146243 3300032126 Bacteria 1812
165 Ga0373960_0012111 3300035121 Bacteria 2138
166 Ga0373961_0014450 3300035241 Bacteria 2006
167 Ga0316574_0095702 3300035398 Bacteria 1898
168 Ga0395900_0091790 3300037418 Bacteria 3120
169 Ga0395901_0010637 3300038443 Bacteria 9324
170 Ga0451577_0003551 3300042876 Bacteria 17229
171 Ga0466958_0137099 3300045836 Bacteria 1539
172 Ga0466967_0029771 3300045976 Bacteria 4575
173 Ga0466967_0055553 3300045976 Bacteria 3488
174 Ga0495651_0123420 3300046462 Bacteria 1900
175 Ga0495652_0008710 3300046529 Bacteria 9244
176 Ga0495645_0011194 3300046543 Bacteria 6309
177 Ga0495645_0013000 3300046543 Bacteria 5877
178 Ga0495634_0001012 3300046642 Bacteria 26406
179 Ga0496100_0001334 3300048903 Bacteria 12081
180 Ga0496101_0019719 3300048904 Bacteria 4609
181 Ga0496102_0001621 3300048905 Bacteria 19812
182 Ga0496103_0032250 3300048906 Bacteria 3196
183 Ga0496104_0147944 3300048907 Bacteria 2255
184 Ga0496106_0001102 3300048909 Bacteria 19974
185 Ga0496107_0210132 3300048910 Bacteria 1447
186 Ga0496109_0013214 3300048912 Bacteria 7147
187 Ga0496109_0076447 3300048912 Bacteria 3079
188 Ga0496109_0220751 3300048912 Bacteria 1782
189 Ga0496109_0247847 3300048912 Bacteria 1677
190 Ga0496110_0005818 3300048913 Bacteria 9689
191 Ga0496110_0325143 3300048913 Bacteria 1401
192 Ga0496112_0000401 3300048915 Bacteria 28280
193 Ga0496112_0477633 3300048915 Bacteria 1183
194 Ga0496113_0013360 3300048916 Bacteria 5559
195 Ga0496113_0074572 3300048916 Bacteria 2587
196 Ga0496114_0015018 3300048917 Bacteria 6226
197 Ga0496115_0003214 3300048918 Bacteria 11730
198 Ga0501031_0108574 3300049568 Bacteria 1812
199 Ga0501039_0208293 3300049575 Bacteria 1537
200 Ga0501040_0011738 3300049576 Bacteria 5730
201 Ga0501041_0010532 3300049577 Bacteria 5451
202 Ga0501048_0128158 3300049582 Bacteria 1794
203 Ga0501070_0121007 3300049586 Bacteria 2163
204 Ga0501072_0010808 3300049588 Bacteria 6956
205 Ga0501072_0068667 3300049588 Bacteria 2797
206 Ga0501075_0094148 3300049591 Bacteria 2274
207 Ga0501076_0015748 3300049592 Bacteria 5719
208 Ga0501077_0098470 3300049593 Bacteria 1853
209 Ga0501079_0014352 3300049741 Bacteria 6040
210 Ga0501045_0031801 3300049824 Bacteria 3822
211 nmdc:mga00v17_10303_c1 3300050491 Bacteria 5098
212 nmdc:mga0yw44_16046_c1 3300050492 Bacteria 4035
213 nmdc:mga0yw44_16352_c1 3300050492 Bacteria 4005
214 nmdc:mga06z11_101764_c1 3300050494 Bacteria 1577
215 nmdc:mga05p37_121956_c1 3300050507 Bacteria 3201
216 nmdc:mga05p37_14553_c1 3300050507 Bacteria 9448
217 nmdc:mga05p37_55160_c1 3300050507 Bacteria 4889
218 nmdc:mga05p37_6488_c1 3300050507 Bacteria 13800
219 nmdc:mga05p37_85002_c1 3300050507 Bacteria 3898
220 nmdc:mga09592_66875_c1 3300050508 Bacteria 3047
221 nmdc:mga0qj67_144905_c1 3300050509 Bacteria 1926
222 nmdc:mga0qj67_23685_c1 3300050509 Bacteria 4725
223 nmdc:mga06r32_37568_c1 3300050510 Bacteria 4581
224 nmdc:mga08y16_146916_c2 3300050511 Bacteria 1943
225 nmdc:mga08y16_156856_c1 3300050511 Bacteria 2365
226 nmdc:mga08y16_186198_c1 3300050511 Bacteria 2154
227 nmdc:mga08y16_27232_c1 3300050511 Bacteria 6022
228 nmdc:mga08y16_49226_c1 3300050511 Bacteria 4411
229 nmdc:mga0n895_196033_c1 3300050512 Bacteria 2051
230 nmdc:mga0n895_285101_c1 3300050512 Bacteria 1675
231 nmdc:mga0a205_204796_c1 3300050515 Bacteria 1862
232 nmdc:mga0a205_34832_c1 3300050515 Bacteria 4832
233 nmdc:mga0a205_41198_c1 3300050515 Bacteria 3687
234 Ga0500568_0014009 3300053139 Bacteria 3635
235 Ga0500568_0024099 3300053139 Bacteria 2580
236 Ga0501084_0011539 3300054114 Bacteria 7315
237 Ga0530510_0005816 3300061734 Bacteria 8544

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048915 Ga0496112_0477633 Ga0496112_0477633_34_1110 347
2 3300049582 Ga0501048_0128158 Ga0501048_0128158_42_1265 356
3 3300049824 Ga0501045_0031801 Ga0501045_0031801_2576_3799 356
4 3300045976 Ga0466967_0055553 Ga0466967_0055553_2345_3463 370
5 iso_pu_bacteria 3006973921 3006975246 377
6 3300050494 nmdc:mga06z11_101764_c1 nmdc:mga06z11_101764_c1_341_1525 380
7 3300053139 Ga0500568_0014009 Ga0500568_0014009_1701_2906 384
8 3300005471 Ga0070698_100000095 Ga0070698_10000009543 386
9 3300006880 Ga0075429_100177687 Ga0075429_1001776872 386
10 3300053139 Ga0500568_0024099 Ga0500568_0024099_1088_2296 386
11 3300009098 Ga0105245_10000089 Ga0105245_1000008944 387
12 3300014969 Ga0157376_10009871 Ga0157376_100098713 387
13 3300025927 Ga0207687_10000029 Ga0207687_1000002976 387
14 3300042876 Ga0451577_0003551 Ga0451577_0003551_8923_10158 387
15 3300005330 Ga0070690_100003329 Ga0070690_1000033296 390
16 3300006028 Ga0070717_10007506 Ga0070717_100075061 390
17 3300028794 Ga0307515_10003491 Ga0307515_1000349113 390
18 3300031507 Ga0307509_10221094 Ga0307509_102210942 390
19 3300031616 Ga0307508_10130934 Ga0307508_101309342 390
20 3300025899 Ga0207642_10085322 Ga0207642_100853222 391
21 3300049591 Ga0501075_0094148 Ga0501075_0094148_35_1366 392
22 3300005329 Ga0070683_100131285 Ga0070683_1001312852 395
23 3300035121 Ga0373960_0012111 Ga0373960_0012111_926_2128 396
24 3300035398 Ga0316574_0095702 Ga0316574_0095702_294_1601 397
25 3300005981 Ga0081538_10089037 Ga0081538_100890372 398
26 3300048915 Ga0496112_0000401 Ga0496112_0000401_6991_8259 398
27 3300009148 Ga0105243_10033594 Ga0105243_100335943 399
28 3300014745 Ga0157377_10075379 Ga0157377_100753791 399
29 3300005937 Ga0081455_10032616 Ga0081455_100326162 401
30 3300006175 Ga0070712_100000153 Ga0070712_10000015310 403
31 3300048916 Ga0496113_0074572 Ga0496113_0074572_1230_2495 403
32 3300025915 Ga0207693_10000487 Ga0207693_1000048733 404
33 3300048913 Ga0496110_0325143 Ga0496110_0325143_130_1377 404
34 3300006871 Ga0075434_100160440 Ga0075434_1001604402 406
35 3300050511 nmdc:mga08y16_156856_c1 nmdc:mga08y16_156856_c1_153_1460 407
36 3300006852 Ga0075433_10055484 Ga0075433_100554842 410
37 3300046462 Ga0495651_0123420 Ga0495651_0123420_29_1300 410
38 3300006847 Ga0075431_100000747 Ga0075431_10000074712 411
39 3300006852 Ga0075433_10044827 Ga0075433_100448272 411
40 3300009094 Ga0111539_10005154 Ga0111539_1000515416 411
41 3300009147 Ga0114129_10105256 Ga0114129_101052564 411
42 3300025940 Ga0207691_10101847 Ga0207691_101018472 411
43 3300048903 Ga0496100_0001334 Ga0496100_0001334_8244_9509 411
44 3300048904 Ga0496101_0019719 Ga0496101_0019719_457_1722 411
45 3300048912 Ga0496109_0220751 Ga0496109_0220751_258_1526 411
46 3300050507 nmdc:mga05p37_85002_c1 nmdc:mga05p37_85002_c1_545_1927 411
47 3300050511 nmdc:mga08y16_27232_c1 nmdc:mga08y16_27232_c1_4116_5498 411
48 3300050515 nmdc:mga0a205_34832_c1 nmdc:mga0a205_34832_c1_2279_3661 411
49 3300005981 Ga0081538_10001296 Ga0081538_1000129621 412
50 3300005981 Ga0081538_10013509 Ga0081538_100135092 412
51 3300005981 Ga0081538_10015877 Ga0081538_100158773 412
52 3300005981 Ga0081538_10027252 Ga0081538_100272524 412
53 3300009147 Ga0114129_10201754 Ga0114129_102017542 412
54 3300013297 Ga0157378_10027476 Ga0157378_100274761 412
55 3300049588 Ga0501072_0010808 Ga0501072_0010808_2030_3427 413
56 3300003373 JGI25407J50210_10004436 JGI25407J50210_100044365 414
57 3300005981 Ga0081538_10000750 Ga0081538_1000075018 414
58 3300005981 Ga0081538_10002876 Ga0081538_1000287613 414
59 3300005981 Ga0081538_10011579 Ga0081538_100115792 414
60 3300005981 Ga0081538_10034048 Ga0081538_100340482 414
61 3300049568 Ga0501031_0108574 Ga0501031_0108574_312_1709 414
62 3300049575 Ga0501039_0208293 Ga0501039_0208293_32_1429 414
63 3300049576 Ga0501040_0011738 Ga0501040_0011738_836_2233 414
64 3300049577 Ga0501041_0010532 Ga0501041_0010532_1606_3003 414
65 3300049592 Ga0501076_0015748 Ga0501076_0015748_458_1855 414
66 3300049593 Ga0501077_0098470 Ga0501077_0098470_302_1699 414
67 3300049741 Ga0501079_0014352 Ga0501079_0014352_2309_3706 414
68 3300054114 Ga0501084_0011539 Ga0501084_0011539_3763_5160 414
69 3300061734 Ga0530510_0005816 Ga0530510_0005816_6729_8126 414
70 3300005327 Ga0070658_10069927 Ga0070658_100699272 415
71 3300005329 Ga0070683_100122217 Ga0070683_1001222172 415
72 3300005336 Ga0070680_100011345 Ga0070680_1000113453 415
73 3300005337 Ga0070682_100022253 Ga0070682_1000222532 415
74 3300005339 Ga0070660_100048650 Ga0070660_1000486503 415
75 3300005344 Ga0070661_100002952 Ga0070661_1000029529 415
76 3300005345 Ga0070692_10052602 Ga0070692_100526022 415
77 3300005347 Ga0070668_100010376 Ga0070668_1000103765 415
78 3300005366 Ga0070659_100036031 Ga0070659_1000360312 415
79 3300005457 Ga0070662_100022067 Ga0070662_1000220675 415
80 3300005458 Ga0070681_10063553 Ga0070681_100635532 415
81 3300005530 Ga0070679_100181579 Ga0070679_1001815793 415
82 3300005535 Ga0070684_100110860 Ga0070684_1001108602 415
83 3300005546 Ga0070696_100008396 Ga0070696_1000083964 415
84 3300005577 Ga0068857_100031056 Ga0068857_1000310564 415
85 3300005616 Ga0068852_100004063 Ga0068852_1000040639 415
86 3300005719 Ga0068861_100075820 Ga0068861_1000758204 415
87 3300006844 Ga0075428_100164916 Ga0075428_1001649163 415
88 3300009093 Ga0105240_10016359 Ga0105240_100163598 415
89 3300009551 Ga0105238_10085858 Ga0105238_100858582 415
90 3300009553 Ga0105249_10013293 Ga0105249_100132936 415
91 3300013104 Ga0157370_10047135 Ga0157370_100471355 415
92 3300013105 Ga0157369_10117471 Ga0157369_101174712 415
93 3300013306 Ga0163162_10034023 Ga0163162_100340236 415
94 3300013307 Ga0157372_10069559 Ga0157372_100695592 415
95 3300020070 Ga0206356_11268940 Ga0206356_112689403 415
96 3300020082 Ga0206353_11988960 Ga0206353_119889603 415
97 3300025909 Ga0207705_10111622 Ga0207705_101116223 415
98 3300025912 Ga0207707_10007012 Ga0207707_100070128 415
99 3300025913 Ga0207695_10071179 Ga0207695_100711795 415
100 3300025917 Ga0207660_10011310 Ga0207660_100113103 415
101 3300025919 Ga0207657_10008020 Ga0207657_100080209 415
102 3300025924 Ga0207694_10089809 Ga0207694_100898093 415
103 3300025932 Ga0207690_10028134 Ga0207690_100281345 415
104 3300025933 Ga0207706_10006613 Ga0207706_100066132 415
105 3300025944 Ga0207661_10000800 Ga0207661_1000080015 415
106 3300025961 Ga0207712_10023103 Ga0207712_100231034 415
107 3300026075 Ga0207708_10135723 Ga0207708_101357231 415
108 3300026078 Ga0207702_10215447 Ga0207702_102154472 415
109 3300026116 Ga0207674_10052852 Ga0207674_100528523 415
110 3300026118 Ga0207675_100005061 Ga0207675_1000050614 415
111 3300026142 Ga0207698_10036032 Ga0207698_100360324 415
112 3300005356 Ga0070674_100001851 Ga0070674_1000018513 416
113 3300025937 Ga0207669_10043994 Ga0207669_100439941 416
114 3300006880 Ga0075429_100183282 Ga0075429_1001832822 417
115 3300009098 Ga0105245_10000236 Ga0105245_1000023636 417
116 3300009147 Ga0114129_10016879 Ga0114129_100168798 417
117 3300025927 Ga0207687_10108600 Ga0207687_101086002 417
118 3300031901 Ga0307406_10105332 Ga0307406_101053322 417
119 3300032126 Ga0307415_100114523 Ga0307415_1001145232 417
120 3300048905 Ga0496102_0001621 Ga0496102_0001621_2265_3629 417
121 3300048906 Ga0496103_0032250 Ga0496103_0032250_1729_3093 417
122 3300048907 Ga0496104_0147944 Ga0496104_0147944_609_1973 417
123 3300048909 Ga0496106_0001102 Ga0496106_0001102_14254_15618 417
124 3300048912 Ga0496109_0076447 Ga0496109_0076447_162_1526 417
125 3300048916 Ga0496113_0013360 Ga0496113_0013360_3785_5149 417
126 3300048917 Ga0496114_0015018 Ga0496114_0015018_2598_3962 417
127 3300048918 Ga0496115_0003214 Ga0496115_0003214_6649_8013 417
128 3300050507 nmdc:mga05p37_14553_c1 nmdc:mga05p37_14553_c1_4377_5642 417
129 3300050508 nmdc:mga09592_66875_c1 nmdc:mga09592_66875_c1_770_2035 417
130 3300006038 Ga0075365_10033364 Ga0075365_100333642 418
131 3300006871 Ga0075434_100191662 Ga0075434_1001916622 418
132 3300027907 Ga0207428_10055765 Ga0207428_100557652 418
133 3300035241 Ga0373961_0014450 Ga0373961_0014450_21_1289 418
134 3300050492 nmdc:mga0yw44_16046_c1 nmdc:mga0yw44_16046_c1_232_1587 418
135 3300050507 nmdc:mga05p37_121956_c1 nmdc:mga05p37_121956_c1_1497_2891 418
136 3300050511 nmdc:mga08y16_49226_c1 nmdc:mga08y16_49226_c1_2469_3737 418
137 3300050512 nmdc:mga0n895_196033_c1 nmdc:mga0n895_196033_c1_665_1933 418
138 3300050515 nmdc:mga0a205_41198_c1 nmdc:mga0a205_41198_c1_747_2015 418
139 3300005981 Ga0081538_10000963 Ga0081538_1000096324 419
140 3300006846 Ga0075430_100165611 Ga0075430_1001656111 420
141 3300031995 Ga0307409_100087089 Ga0307409_1000870892 420
142 3300032002 Ga0307416_100048702 Ga0307416_1000487023 420
143 3300005327 Ga0070658_10020709 Ga0070658_100207092 421
144 3300005337 Ga0070682_100002644 Ga0070682_1000026442 421
145 3300005339 Ga0070660_100003887 Ga0070660_1000038874 421
146 3300005345 Ga0070692_10014281 Ga0070692_100142812 421
147 3300005354 Ga0070675_100011055 Ga0070675_1000110556 421
148 3300005366 Ga0070659_100002906 Ga0070659_1000029067 421
149 3300005441 Ga0070700_100002016 Ga0070700_1000020167 421
150 3300005455 Ga0070663_100010908 Ga0070663_1000109084 421
151 3300005535 Ga0070684_100011706 Ga0070684_1000117065 421
152 3300005564 Ga0070664_100005674 Ga0070664_1000056747 421
153 3300005578 Ga0068854_100005733 Ga0068854_1000057334 421
154 3300005718 Ga0068866_10039206 Ga0068866_100392062 421
155 3300005719 Ga0068861_100121668 Ga0068861_1001216682 421
156 3300005843 Ga0068860_100109507 Ga0068860_1001095072 421
157 3300005937 Ga0081455_10025854 Ga0081455_100258544 421
158 3300005981 Ga0081538_10011642 Ga0081538_100116425 421
159 3300006844 Ga0075428_100150341 Ga0075428_1001503412 421
160 3300006846 Ga0075430_100007186 Ga0075430_1000071867 421
161 3300006881 Ga0068865_100012407 Ga0068865_1000124075 421
162 3300009094 Ga0111539_10137801 Ga0111539_101378012 421
163 3300009148 Ga0105243_10048123 Ga0105243_100481232 421
164 3300014745 Ga0157377_10005583 Ga0157377_100055835 421
165 3300014968 Ga0157379_10060245 Ga0157379_100602452 421
166 3300025900 Ga0207710_10052893 Ga0207710_100528932 421
167 3300025901 Ga0207688_10001871 Ga0207688_100018718 421
168 3300025919 Ga0207657_10007993 Ga0207657_100079937 421
169 3300025923 Ga0207681_10155390 Ga0207681_101553902 421
170 3300025926 Ga0207659_10030370 Ga0207659_100303702 421
171 3300025932 Ga0207690_10013290 Ga0207690_100132904 421
172 3300025933 Ga0207706_10000930 Ga0207706_1000093022 421
173 3300025935 Ga0207709_10031711 Ga0207709_100317112 421
174 3300025937 Ga0207669_10031373 Ga0207669_100313733 421
175 3300025940 Ga0207691_10055865 Ga0207691_100558652 421
176 3300025944 Ga0207661_10148793 Ga0207661_101487932 421
177 3300025945 Ga0207679_10011261 Ga0207679_100112614 421
178 3300026035 Ga0207703_10096371 Ga0207703_100963712 421
179 3300026067 Ga0207678_10003309 Ga0207678_100033097 421
180 3300026075 Ga0207708_10018236 Ga0207708_100182364 421
181 3300026089 Ga0207648_10019850 Ga0207648_100198503 421
182 3300026118 Ga0207675_100047766 Ga0207675_1000477661 421
183 3300026121 Ga0207683_10007651 Ga0207683_100076513 421
184 3300048912 Ga0496109_0013214 Ga0496109_0013214_4179_5486 421
185 3300048913 Ga0496110_0005818 Ga0496110_0005818_1382_2689 421
186 3300050492 nmdc:mga0yw44_16352_c1 nmdc:mga0yw44_16352_c1_1162_2469 421
187 3300050509 nmdc:mga0qj67_144905_c1 nmdc:mga0qj67_144905_c1_478_1749 421
188 3300050510 nmdc:mga06r32_37568_c1 nmdc:mga06r32_37568_c1_2425_3696 421
189 3300050511 nmdc:mga08y16_186198_c1 nmdc:mga08y16_186198_c1_646_1953 421
190 3300005458 Ga0070681_10148865 Ga0070681_101488652 422
191 3300005530 Ga0070679_100174082 Ga0070679_1001740822 422
192 3300005535 Ga0070684_100012750 Ga0070684_1000127507 422
193 3300009553 Ga0105249_10151441 Ga0105249_101514412 422
194 3300017792 Ga0163161_10000240 Ga0163161_1000024041 422
195 3300025912 Ga0207707_10115197 Ga0207707_101151972 422
196 3300026089 Ga0207648_10103911 Ga0207648_101039111 422
197 3300045976 Ga0466967_0029771 Ga0466967_0029771_1733_3001 422
198 3300048910 Ga0496107_0210132 Ga0496107_0210132_89_1357 422
199 3300048912 Ga0496109_0247847 Ga0496109_0247847_152_1426 422
200 3300046529 Ga0495652_0008710 Ga0495652_0008710_2010_3293 423
201 3300046543 Ga0495645_0011194 Ga0495645_0011194_3023_4306 423
202 3300046543 Ga0495645_0013000 Ga0495645_0013000_2805_4103 424
203 3300046642 Ga0495634_0001012 Ga0495634_0001012_10361_11659 424
204 3300005545 Ga0070695_100086443 Ga0070695_1000864432 425
205 3300005981 Ga0081538_10000045 Ga0081538_1000004526 425
206 3300009176 Ga0105242_10113574 Ga0105242_101135742 425
207 3300025908 Ga0207643_10020002 Ga0207643_100200023 425
208 3300026121 Ga0207683_10177553 Ga0207683_101775532 425
209 3300031903 Ga0307407_10008836 Ga0307407_100088364 425
210 3300032126 Ga0307415_100015014 Ga0307415_1000150142 425
211 3300050507 nmdc:mga05p37_6488_c1 nmdc:mga05p37_6488_c1_1608_2924 425
212 3300050512 nmdc:mga0n895_285101_c1 nmdc:mga0n895_285101_c1_278_1594 425
213 3300005334 Ga0068869_100030862 Ga0068869_1000308622 426
214 3300045836 Ga0466958_0137099 Ga0466958_0137099_216_1496 426
215 3300049586 Ga0501070_0121007 Ga0501070_0121007_412_1743 427
216 3300049588 Ga0501072_0068667 Ga0501072_0068667_1341_2672 427
217 3300050491 nmdc:mga00v17_10303_c1 nmdc:mga00v17_10303_c1_227_1558 427
218 3300006844 Ga0075428_100366250 Ga0075428_1003662502 429
219 3300006846 Ga0075430_100008745 Ga0075430_1000087452 429
220 3300006847 Ga0075431_100023546 Ga0075431_1000235462 429
221 3300006880 Ga0075429_100013499 Ga0075429_1000134995 429
222 3300009147 Ga0114129_10054111 Ga0114129_100541112 429
223 3300050507 nmdc:mga05p37_55160_c1 nmdc:mga05p37_55160_c1_670_2001 429
224 3300050509 nmdc:mga0qj67_23685_c1 nmdc:mga0qj67_23685_c1_2243_3574 429
225 3300050511 nmdc:mga08y16_146916_c2 nmdc:mga08y16_146916_c2_331_1665 429
226 3300005466 Ga0070685_10059699 Ga0070685_100596992 431
227 3300005981 Ga0081538_10000273 Ga0081538_100002739 431
228 3300009101 Ga0105247_10086633 Ga0105247_100866331 431
229 3300009174 Ga0105241_10116473 Ga0105241_101164732 431
230 3300010375 Ga0105239_10245889 Ga0105239_102458892 431
231 3300026089 Ga0207648_10049168 Ga0207648_100491683 431
232 3300031903 Ga0307407_10088788 Ga0307407_100887882 431
233 3300032004 Ga0307414_10128793 Ga0307414_101287932 431
234 3300032126 Ga0307415_100146243 Ga0307415_1001462432 431
235 3300037418 Ga0395900_0091790 Ga0395900_0091790_961_2343 431
236 3300038443 Ga0395901_0010637 Ga0395901_0010637_1573_2946 431
237 3300050515 nmdc:mga0a205_204796_c1 nmdc:mga0a205_204796_c1_38_1336 431
238 3300003373 JGI25407J50210_10000093 JGI25407J50210_100000935 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

123

218

0.93

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

6

114

0.93

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

248

407

0.92

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

261

397

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y0a-assembly1.cif.gz_B crystal structure of human short-chain acyl-coa dehydrogenase 0.9025 16 411
2vig-assembly2.cif.gz_G crystal structure of human short-chain acyl coa dehydrogenase 0.9021 18 411
4u83-assembly2.cif.gz_D structure of brucella abortus butyryl-coa dehydrogenase 0.9021 14 405
2vig-assembly1.cif.gz_A crystal structure of human short-chain acyl coa dehydrogenase 0.8987 18 411
7w0j-assembly1.cif.gz_F acyl-coa dehydrogenase, tfu_1647 0.8982 15 405
ID Description Score Start End Superfamily
af_P9WQG1_243_389_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9468 264 406 1.20.140.10
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9463 265 381 1.20.140.10
4iv6A03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.945 264 405 1.20.140.10
af_B4FL28_243_386_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9438 268 405 1.20.140.10
1udyC03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9433 269 411 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A6J7K3V0-F1-model_v4 Unannotated protein 0.9633 266 409 GO:0003995
AF-A0A6L5FV49-F1-model_v4 Acyl-CoA dehydrogenase 0.9557 14 408 GO:0003995
GO:0050660
AF-A0A535DJS4-F1-model_v4 Acyl-CoA dehydrogenase 0.953 14 365 GO:0003995
GO:0050660
AF-A0A6L5FV49-F1-model_v4 Acyl-CoA dehydrogenase 0.9511 14 408 GO:0003995
GO:0050660
AF-A0A838FBJ6-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9509 16 399 GO:0003995
GO:0050660

Feature Viewer

pLDDT pTM Quality
86.35 0.85 High
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Predicted Structure (AlphaFold2)

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