F350961

General Info

Members Datasets Scaffolds Average Seq Length
238 142 476 389

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10077883|Ga0157380_100778832
Length 446
Sequence MTLKTRLSVLLLSTPVLAFVVVGGLMGNASARSGDDTFQHLRVFDDVLQHVISTYVEEVKVDKVMEGAMKGLADGLDPDSAYLNAKLLSEVESGTATPEGDVGLELTRQFYLRVIAARDGSPAAKAGLHTGDYVRAIDGKPARDMSVFEGTRLLRGQPGSKVTLTVIRGSAADPHEVSLVREKAAGPVVTGRLISLAGRDVPAAKAGDMVDLPLLSAEAGYVRIASFRSGVVEDLRKQVADLSKSGAKSLIIDVRRTAEGPLENGIAAARLFVKSGTLAIKAGHKGEGKETVEARSGDGAVVLPIQILITNGTAGAAEVFAAALNGNKRGELVGEHTIGRAALQKLVKLPEGRALWLTYASYYRPGGAPITTNKPPAGQVRVPDSPDQPAGKAIESLIRETPIQGKGLEPTVEVEDVDVADFGSIQSDKDPILDAALDRLKQGTAK

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
73 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
74 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
80 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
81 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
82 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
83 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
110 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
111 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
114 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
115 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
131 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
132 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
133 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
134 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
135 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
138 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
139 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
140 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.36
Nodule 0
Rhizoplane 3.78
Rhizosphere 92.86
Stem 0
Stem Tuber 0
Unclassified 9.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10077883 3300014326 Bacteria 2703
2 Ga0065712_10105841 3300005290 Bacteria 1930
3 Ga0065715_10111348 3300005293 Bacteria 2577
4 Ga0065715_10114401 3300005293 Bacteria 2452
5 Ga0065715_10116847 3300005293 Bacteria 2366
6 Ga0070683_100004865 3300005329 Bacteria 11124
7 Ga0070670_100023496 3300005331 Bacteria 5306
8 Ga0070670_100025784 3300005331 Bacteria 5059
9 Ga0070660_100051543 3300005339 Bacteria 3170
10 Ga0070661_100043455 3300005344 Bacteria 3282
11 Ga0070668_100039243 3300005347 Unclassified 3621
12 Ga0070669_100007162 3300005353 Bacteria 8015
13 Ga0070669_100045171 3300005353 Bacteria 3209
14 Ga0070675_100010691 3300005354 Bacteria 7176
15 Ga0070674_100055556 3300005356 Bacteria 2742
16 Ga0070659_100028594 3300005366 Bacteria 4307
17 Ga0070711_100137209 3300005439 Bacteria 1830
18 Ga0070705_100106308 3300005440 Bacteria 1784
19 Ga0070678_100008520 3300005456 Bacteria 6144
20 Ga0070662_100056882 3300005457 Bacteria 2840
21 Ga0070662_100070692 3300005457 Bacteria 2572
22 Ga0070685_10180865 3300005466 Bacteria 1357
23 Ga0070698_100031780 3300005471 Bacteria 5471
24 Ga0070679_100019659 3300005530 Bacteria 6573
25 Ga0070672_100112693 3300005543 Bacteria 2219
26 Ga0068855_100184279 3300005563 Bacteria 2359
27 Ga0068859_100024105 3300005617 Bacteria 6106
28 Ga0068864_100307408 3300005618 Bacteria 1486
29 Ga0068862_100288158 3300005844 Unclassified 1507
30 Ga0075364_10027399 3300006051 Bacteria 3640
31 Ga0097621_100120274 3300006237 Bacteria 2227
32 Ga0068871_100072825 3300006358 Bacteria 2831
33 Ga0068871_100146251 3300006358 Bacteria 2013
34 Ga0075428_100004324 3300006844 Bacteria 15656
35 Ga0075428_100004980 3300006844 Bacteria 14752
36 Ga0075428_100008303 3300006844 Bacteria 11509
37 Ga0075428_100008476 3300006844 Bacteria 11405
38 Ga0075428_100033247 3300006844 Bacteria 5695
39 Ga0075430_100002765 3300006846 Bacteria 14662
40 Ga0075430_100004526 3300006846 Bacteria 11712
41 Ga0075430_100013310 3300006846 Bacteria 7013
42 Ga0075430_100018530 3300006846 Bacteria 5923
43 Ga0075431_100005324 3300006847 Bacteria 12688
44 Ga0075431_100017573 3300006847 Bacteria 7271
45 Ga0075431_100026430 3300006847 Bacteria 5955
46 Ga0075431_100166037 3300006847 Bacteria 2269
47 Ga0075431_100168339 3300006847 Bacteria 2252
48 Ga0075431_100188244 3300006847 Bacteria 2115
49 Ga0075433_10099069 3300006852 Unclassified 2580
50 Ga0075434_100156130 3300006871 Unclassified 2301
51 Ga0075429_100006647 3300006880 Bacteria 10021
52 Ga0075429_100023264 3300006880 Bacteria 5374
53 Ga0075429_100025060 3300006880 Bacteria 5178
54 Ga0075429_100035713 3300006880 Bacteria 4323
55 Ga0097620_100024105 3300006931 Bacteria 6106
56 Ga0075435_100060217 3300007076 Unclassified 3078
57 Ga0111539_10000392 3300009094 Bacteria 54288
58 Ga0111539_10057211 3300009094 Bacteria 4631
59 Ga0111539_10075104 3300009094 Bacteria 3982
60 Ga0111539_10090561 3300009094 Bacteria 3595
61 Ga0111539_10141631 3300009094 Bacteria 2815
62 Ga0111539_10212366 3300009094 Bacteria 2255
63 Ga0111539_10291034 3300009094 Bacteria 1901
64 Ga0114129_10001950 3300009147 Bacteria 28261
65 Ga0114129_10006451 3300009147 Bacteria 16636
66 Ga0114129_10014628 3300009147 Bacteria 11180
67 Ga0114129_10204355 3300009147 Bacteria 2673
68 Ga0114129_10277427 3300009147 Bacteria 2240
69 Ga0114129_10295514 3300009147 Unclassified 2161
70 Ga0114129_10442352 3300009147 Bacteria 1706
71 Ga0105249_10000559 3300009553 Bacteria 34278
72 Ga0157374_10025458 3300013296 Bacteria 5314
73 Ga0163163_10014041 3300014325 Bacteria 7351
74 Ga0163163_10032019 3300014325 Bacteria 5078
75 Ga0157377_10037952 3300014745 Bacteria 2657
76 Ga0207697_10001668 3300025315 Bacteria 11987
77 Ga0207688_10002335 3300025901 Bacteria 10191
78 Ga0207645_10062427 3300025907 Bacteria 2380
79 Ga0207657_10057058 3300025919 Bacteria 3367
80 Ga0207649_10025856 3300025920 Bacteria 3428
81 Ga0207646_10354792 3300025922 Bacteria 1325
82 Ga0207681_10000533 3300025923 Bacteria 26280
83 Ga0207650_10014244 3300025925 Bacteria 5524
84 Ga0207650_10057301 3300025925 Bacteria 2898
85 Ga0207659_10026789 3300025926 Bacteria 3895
86 Ga0207659_10168386 3300025926 Bacteria 1726
87 Ga0207644_10050999 3300025931 Bacteria 2968
88 Ga0207706_10026258 3300025933 Bacteria 5213
89 Ga0207691_10126260 3300025940 Bacteria 2263
90 Ga0207691_10192074 3300025940 Unclassified 1780
91 Ga0207711_10218531 3300025941 Bacteria 1742
92 Ga0207661_10053026 3300025944 Bacteria 3243
93 Ga0207667_10147255 3300025949 Bacteria 2424
94 Ga0207712_10093105 3300025961 Bacteria 2223
95 Ga0207668_10277413 3300025972 Bacteria 1373
96 Ga0207678_10178523 3300026067 Bacteria 1813
97 Ga0207676_10080786 3300026095 Bacteria 2640
98 Ga0207676_10207225 3300026095 Bacteria 1737
99 Ga0207674_10011236 3300026116 Bacteria 10061
100 Ga0207674_10207583 3300026116 Bacteria 1908
101 Ga0207675_100014890 3300026118 Bacteria 7260
102 Ga0207683_10017065 3300026121 Bacteria 6179
103 Ga0207428_10005712 3300027907 Bacteria 11566
104 Ga0207428_10027204 3300027907 Bacteria 4763
105 Ga0207428_10027402 3300027907 Bacteria 4743
106 Ga0268265_10046739 3300028380 Bacteria 3238
107 Ga0268265_10148938 3300028380 Bacteria 1971
108 Ga0307408_100025057 3300031548 Bacteria 4081
109 Ga0307413_10010172 3300031824 Unclassified 4547
110 Ga0307409_100342151 3300031995 Bacteria 1408
111 Ga0307416_100017729 3300032002 Bacteria 4992
112 Ga0307416_100046420 3300032002 Bacteria 3427
113 Ga0307416_100055038 3300032002 Bacteria 3201
114 Ga0307416_100067943 3300032002 Bacteria 2942
115 Ga0307416_100100635 3300032002 Bacteria 2514
116 Ga0307416_100125438 3300032002 Bacteria 2299
117 Ga0307411_10038662 3300032005 Bacteria 3012
118 Ga0307415_100039456 3300032126 Bacteria 3121
119 Ga0307415_100086283 3300032126 Bacteria 2258
120 Ga0373945_0031361 3300035116 Bacteria 1878
121 Ga0373962_0032497 3300035242 Unclassified 1436
122 Ga0373924_0064051 3300035410 Unclassified 1543
123 Ga0373927_0080541 3300035695 Bacteria 2110
124 Ga0373947_0118523 3300035725 Bacteria 1680
125 Ga0373937_0053630 3300036401 Bacteria 3698
126 Ga0373925_0022790 3300037068 Bacteria 4570
127 Ga0439431_0022415 3300041997 Bacteria 1522
128 Ga0439449_0024426 3300042007 Bacteria 2260
129 Ga0450923_011424 3300042125 Unclassified 1596
130 Ga0439446_0003204 3300042156 Bacteria 4035
131 Ga0439435_0016315 3300042436 Bacteria 1861
132 Ga0451577_0366817 3300042876 Unclassified 1306
133 Ga0439440_0003054 3300042993 Unclassified 3195
134 Ga0439440_0012821 3300042993 Unclassified 1789
135 Ga0453684_0196876 3300044712 Unclassified 2352
136 Ga0451576_0376744 3300045051 Bacteria 1487
137 Ga0495680_0112188 3300047322 Bacteria 2020
138 Ga0496104_0025660 3300048907 Bacteria 5435
139 Ga0496104_0139702 3300048907 Bacteria 2328
140 Ga0496108_0003964 3300048911 Bacteria 11893
141 Ga0496108_0319675 3300048911 Unclassified 1353
142 Ga0496110_0007724 3300048913 Bacteria 8606
143 Ga0496111_0014319 3300048914 Bacteria 5416
144 Ga0496112_0021083 3300048915 Bacteria 6190
145 Ga0496112_0054195 3300048915 Bacteria 3940
146 Ga0496114_0160281 3300048917 Unclassified 1956
147 Ga0501298_009281 3300049521 Bacteria 1670
148 Ga0501032_0122200 3300049569 Bacteria 1721
149 Ga0501034_0007358 3300049571 Bacteria 11727
150 Ga0501036_0033211 3300049572 Bacteria 4364
151 Ga0501036_0171795 3300049572 Bacteria 1826
152 Ga0501036_0181257 3300049572 Bacteria 1773
153 Ga0501038_0059812 3300049574 Bacteria 3263
154 Ga0501039_0067068 3300049575 Bacteria 2787
155 Ga0501039_0181519 3300049575 Bacteria 1655
156 Ga0501040_0023164 3300049576 Bacteria 4162
157 Ga0501040_0169403 3300049576 Bacteria 1546
158 Ga0501040_0169941 3300049576 Bacteria 1543
159 Ga0501040_0183307 3300049576 Bacteria 1484
160 Ga0501041_0019954 3300049577 Bacteria 4005
161 Ga0501041_0087787 3300049577 Bacteria 1920
162 Ga0501041_0133859 3300049577 Bacteria 1544
163 Ga0501042_0024015 3300049578 Bacteria 4272
164 Ga0501042_0038810 3300049578 Bacteria 3382
165 Ga0501043_0028051 3300049579 Unclassified 4419
166 Ga0501046_0102825 3300049580 Bacteria 2190
167 Ga0501047_0001667 3300049581 Bacteria 21598
168 Ga0501048_0014768 3300049582 Bacteria 5778
169 Ga0501048_0200016 3300049582 Bacteria 1416
170 Ga0501070_0206254 3300049586 Unclassified 1614
171 Ga0501070_0224004 3300049586 Unclassified 1542
172 Ga0501071_0031782 3300049587 Bacteria 3745
173 Ga0501071_0044441 3300049587 Bacteria 3186
174 Ga0501071_0223191 3300049587 Bacteria 1418
175 Ga0501072_0016374 3300049588 Bacteria 5690
176 Ga0501072_0028439 3300049588 Bacteria 4365
177 Ga0501072_0049615 3300049588 Bacteria 3304
178 Ga0501072_0253330 3300049588 Bacteria 1402
179 Ga0501073_0030048 3300049589 Bacteria 3881
180 Ga0501073_0186680 3300049589 Bacteria 1435
181 Ga0501074_0026804 3300049590 Bacteria 4178
182 Ga0501075_0025795 3300049591 Bacteria 4319
183 Ga0501075_0054019 3300049591 Unclassified 3021
184 Ga0501075_0068853 3300049591 Bacteria 2674
185 Ga0501075_0130145 3300049591 Bacteria 1917
186 Ga0501076_0166229 3300049592 Bacteria 1798
187 Ga0501077_0035745 3300049593 Bacteria 3163
188 Ga0501079_0014680 3300049741 Bacteria 5972
189 Ga0501079_0048528 3300049741 Bacteria 3276
190 Ga0501080_0253009 3300049742 Bacteria 1606
191 Ga0501080_0419126 3300049742 Unclassified 1203
192 Ga0501081_0011183 3300049743 Bacteria 5870
193 Ga0501081_0201715 3300049743 Bacteria 1443
194 Ga0501044_0005396 3300049823 Bacteria 14200
195 Ga0501045_0007499 3300049824 Bacteria 7579
196 Ga0501045_0115757 3300049824 Bacteria 1989
197 nmdc:mga06z11_33844_c1 3300050494 Bacteria 2503
198 nmdc:mga06z11_60068_c1 3300050494 Bacteria 1978
199 nmdc:mga05p37_1351_c1 3300050507 Bacteria 28525
200 nmdc:mga05p37_294936_c1 3300050507 Bacteria 1929
201 nmdc:mga05p37_3476_c2 3300050507 Bacteria 11718
202 nmdc:mga05p37_68651_c2 3300050507 Bacteria 3922
203 nmdc:mga05p37_91269_c1 3300050507 Bacteria 3753
204 nmdc:mga09592_31130_c1 3300050508 Bacteria 4444
205 nmdc:mga09592_4991_c1 3300050508 Bacteria 10755
206 nmdc:mga09592_99514_c1 3300050508 Bacteria 2489
207 nmdc:mga0qj67_16242_c1 3300050509 Bacteria 5642
208 nmdc:mga0qj67_3824_c1 3300050509 Bacteria 10879
209 nmdc:mga0qj67_80363_c1 3300050509 Bacteria 2612
210 nmdc:mga0qj67_9380_c1 3300050509 Bacteria 7281
211 nmdc:mga06r32_108623_c1 3300050510 Bacteria 2728
212 nmdc:mga06r32_136082_c1 3300050510 Bacteria 2431
213 nmdc:mga06r32_54852_c1 3300050510 Bacteria 3822
214 nmdc:mga06r32_6148_c1 3300050510 Bacteria 10779
215 nmdc:mga06r32_7527_c1 3300050510 Bacteria 9796
216 nmdc:mga06r32_89435_c1 3300050510 Bacteria 3007
217 nmdc:mga08y16_3594_c1 3300050511 Bacteria 16104
218 nmdc:mga08y16_38656_c1 3300050511 Bacteria 5009
219 nmdc:mga0n895_155328_c1 3300050512 Bacteria 2318
220 nmdc:mga0n895_24095_c1 3300050512 Bacteria 5731
221 nmdc:mga0rr50_10224_c1 3300050513 Bacteria 5943
222 nmdc:mga0a205_36082_c1 3300050515 Bacteria 4750
223 Ga0495619_0051635 3300053085 Bacteria 2717
224 Ga0500641_0005632 3300053096 Bacteria 4438
225 Ga0500555_000184 3300053103 Bacteria 28411
226 Ga0500568_0002159 3300053139 Bacteria 11864
227 Ga0500616_0000100 3300053153 Bacteria 173477
228 Ga0500645_001139 3300053730 Bacteria 14408
229 Ga0501084_0112465 3300054114 Bacteria 2288
230 Ga0501084_0234407 3300054114 Bacteria 1549
231 Ga0590071_000207 3300059421 Bacteria 17379
232 Ga0590071_005906 3300059421 Bacteria 2933
233 Ga0590074_001137 3300059423 Bacteria 4188
234 Ga0590075_000291 3300059424 Bacteria 14207
235 Ga0590077_001053 3300059426 Bacteria 6846
236 Ga0590077_003664 3300059426 Bacteria 3172
237 Ga0501082_0180490 3300060353 Unclassified 1836
238 Ga0530510_0024666 3300061734 Bacteria 4294
239 Ga0157380_10077883
240 Ga0065712_10105841
241 Ga0065715_10111348
242 Ga0065715_10114401
243 Ga0065715_10116847
244 Ga0070683_100004865
245 Ga0070670_100023496
246 Ga0070670_100025784
247 Ga0070660_100051543
248 Ga0070661_100043455
249 Ga0070668_100039243
250 Ga0070669_100007162
251 Ga0070669_100045171
252 Ga0070675_100010691
253 Ga0070674_100055556
254 Ga0070659_100028594
255 Ga0070711_100137209
256 Ga0070705_100106308
257 Ga0070678_100008520
258 Ga0070662_100056882
259 Ga0070662_100070692
260 Ga0070685_10180865
261 Ga0070698_100031780
262 Ga0070679_100019659
263 Ga0070672_100112693
264 Ga0068855_100184279
265 Ga0068859_100024105
266 Ga0068864_100307408
267 Ga0068862_100288158
268 Ga0075364_10027399
269 Ga0097621_100120274
270 Ga0068871_100072825
271 Ga0068871_100146251
272 Ga0075428_100004324
273 Ga0075428_100004980
274 Ga0075428_100008303
275 Ga0075428_100008476
276 Ga0075428_100033247
277 Ga0075430_100002765
278 Ga0075430_100004526
279 Ga0075430_100013310
280 Ga0075430_100018530
281 Ga0075431_100005324
282 Ga0075431_100017573
283 Ga0075431_100026430
284 Ga0075431_100166037
285 Ga0075431_100168339
286 Ga0075431_100188244
287 Ga0075433_10099069
288 Ga0075434_100156130
289 Ga0075429_100006647
290 Ga0075429_100023264
291 Ga0075429_100025060
292 Ga0075429_100035713
293 Ga0097620_100024105
294 Ga0075435_100060217
295 Ga0111539_10000392
296 Ga0111539_10057211
297 Ga0111539_10075104
298 Ga0111539_10090561
299 Ga0111539_10141631
300 Ga0111539_10212366
301 Ga0111539_10291034
302 Ga0114129_10001950
303 Ga0114129_10006451
304 Ga0114129_10014628
305 Ga0114129_10204355
306 Ga0114129_10277427
307 Ga0114129_10295514
308 Ga0114129_10442352
309 Ga0105249_10000559
310 Ga0157374_10025458
311 Ga0163163_10014041
312 Ga0163163_10032019
313 Ga0157377_10037952
314 Ga0207697_10001668
315 Ga0207688_10002335
316 Ga0207645_10062427
317 Ga0207657_10057058
318 Ga0207649_10025856
319 Ga0207646_10354792
320 Ga0207681_10000533
321 Ga0207650_10014244
322 Ga0207650_10057301
323 Ga0207659_10026789
324 Ga0207659_10168386
325 Ga0207644_10050999
326 Ga0207706_10026258
327 Ga0207691_10126260
328 Ga0207691_10192074
329 Ga0207711_10218531
330 Ga0207661_10053026
331 Ga0207667_10147255
332 Ga0207712_10093105
333 Ga0207668_10277413
334 Ga0207678_10178523
335 Ga0207676_10080786
336 Ga0207676_10207225
337 Ga0207674_10011236
338 Ga0207674_10207583
339 Ga0207675_100014890
340 Ga0207683_10017065
341 Ga0207428_10005712
342 Ga0207428_10027204
343 Ga0207428_10027402
344 Ga0268265_10046739
345 Ga0268265_10148938
346 Ga0307408_100025057
347 Ga0307413_10010172
348 Ga0307409_100342151
349 Ga0307416_100017729
350 Ga0307416_100046420
351 Ga0307416_100055038
352 Ga0307416_100067943
353 Ga0307416_100100635
354 Ga0307416_100125438
355 Ga0307411_10038662
356 Ga0307415_100039456
357 Ga0307415_100086283
358 Ga0373945_0031361
359 Ga0373962_0032497
360 Ga0373924_0064051
361 Ga0373927_0080541
362 Ga0373947_0118523
363 Ga0373937_0053630
364 Ga0373925_0022790
365 Ga0439431_0022415
366 Ga0439449_0024426
367 Ga0450923_011424
368 Ga0439446_0003204
369 Ga0439435_0016315
370 Ga0451577_0366817
371 Ga0439440_0003054
372 Ga0439440_0012821
373 Ga0453684_0196876
374 Ga0451576_0376744
375 Ga0495680_0112188
376 Ga0496104_0025660
377 Ga0496104_0139702
378 Ga0496108_0003964
379 Ga0496108_0319675
380 Ga0496110_0007724
381 Ga0496111_0014319
382 Ga0496112_0021083
383 Ga0496112_0054195
384 Ga0496114_0160281
385 Ga0501298_009281
386 Ga0501032_0122200
387 Ga0501034_0007358
388 Ga0501036_0033211
389 Ga0501036_0171795
390 Ga0501036_0181257
391 Ga0501038_0059812
392 Ga0501039_0067068
393 Ga0501039_0181519
394 Ga0501040_0023164
395 Ga0501040_0169403
396 Ga0501040_0169941
397 Ga0501040_0183307
398 Ga0501041_0019954
399 Ga0501041_0087787
400 Ga0501041_0133859
401 Ga0501042_0024015
402 Ga0501042_0038810
403 Ga0501043_0028051
404 Ga0501046_0102825
405 Ga0501047_0001667
406 Ga0501048_0014768
407 Ga0501048_0200016
408 Ga0501070_0206254
409 Ga0501070_0224004
410 Ga0501071_0031782
411 Ga0501071_0044441
412 Ga0501071_0223191
413 Ga0501072_0016374
414 Ga0501072_0028439
415 Ga0501072_0049615
416 Ga0501072_0253330
417 Ga0501073_0030048
418 Ga0501073_0186680
419 Ga0501074_0026804
420 Ga0501075_0025795
421 Ga0501075_0054019
422 Ga0501075_0068853
423 Ga0501075_0130145
424 Ga0501076_0166229
425 Ga0501077_0035745
426 Ga0501079_0014680
427 Ga0501079_0048528
428 Ga0501080_0253009
429 Ga0501080_0419126
430 Ga0501081_0011183
431 Ga0501081_0201715
432 Ga0501044_0005396
433 Ga0501045_0007499
434 Ga0501045_0115757
435 nmdc:mga06z11_33844_c1
436 nmdc:mga06z11_60068_c1
437 nmdc:mga05p37_1351_c1
438 nmdc:mga05p37_294936_c1
439 nmdc:mga05p37_3476_c2
440 nmdc:mga05p37_68651_c2
441 nmdc:mga05p37_91269_c1
442 nmdc:mga09592_31130_c1
443 nmdc:mga09592_4991_c1
444 nmdc:mga09592_99514_c1
445 nmdc:mga0qj67_16242_c1
446 nmdc:mga0qj67_3824_c1
447 nmdc:mga0qj67_80363_c1
448 nmdc:mga0qj67_9380_c1
449 nmdc:mga06r32_108623_c1
450 nmdc:mga06r32_136082_c1
451 nmdc:mga06r32_54852_c1
452 nmdc:mga06r32_6148_c1
453 nmdc:mga06r32_7527_c1
454 nmdc:mga06r32_89435_c1
455 nmdc:mga08y16_3594_c1
456 nmdc:mga08y16_38656_c1
457 nmdc:mga0n895_155328_c1
458 nmdc:mga0n895_24095_c1
459 nmdc:mga0rr50_10224_c1
460 nmdc:mga0a205_36082_c1
461 Ga0495619_0051635
462 Ga0500641_0005632
463 Ga0500555_000184
464 Ga0500568_0002159
465 Ga0500616_0000100
466 Ga0500645_001139
467 Ga0501084_0112465
468 Ga0501084_0234407
469 Ga0590071_000207
470 Ga0590071_005906
471 Ga0590074_001137
472 Ga0590075_000291
473 Ga0590077_001053
474 Ga0590077_003664
475 Ga0501082_0180490
476 Ga0530510_0024666

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03572

Peptidase_S41

Peptidase family S41

218

379

0.96

PF17820

PDZ_6

PDZ domain

113

168

0.93

PF00595

PDZ

PDZ domain

99

167

0.9

PF13180

PDZ_2

PDZ domain

91

179

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hck-assembly1.cif.gz_A-2 nmr fragment-based screening against the two pdz do-mains of mda-9 0.893 102 168
4z33-assembly2.cif.gz_B crystal structure of the syntenin pdz1 and pdz2 tandem in complex with the frizzled 7 c-terminal fragment and pip2 0.8891 100 168
6bxg-assembly1.cif.gz_A 1.45 angstrom resolution crystal structure of pdz domain of carboxy-terminal protease from vibrio cholerae in complex with peptide. 0.8861 101 183
8aao-assembly1.cif.gz_B crystal structure of the pdz tandem of syntenin in complex with compound 95 0.8807 100 168
7fta-assembly4.cif.gz_D sdcbp pandda analysis group deposition -- the pdz domans of sdcbp in complex with z228589380 0.8716 101 167
ID Description Score Start End Superfamily
af_Q5ZA08_147_239_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9224 103 183 2.30.42.10
1fc6A02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9127 102 186 2.30.42.10
af_O23614_210_301_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8975 102 186 2.30.42.10
af_F4KHG6_292_467_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.8807 189 357 3.90.226.10
af_Q4D0I1_345_430_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8781 103 144 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A2H0DLI1-F1-model_v4 PDZ domain-containing protein 0.9351 96 184
AF-C0P951-F1-model_v4 PDZ domain-containing protein 0.9245 101 186
AF-A0A512NQH1-F1-model_v4 PDZ domain-containing protein 0.9244 101 185
AF-A0A7S0TP60-F1-model_v4 PDZ domain-containing protein 0.9175 97 186
AF-A0A7Y5GZD0-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.9162 100 183 GO:0004180
GO:0016020
GO:0030246

Map