F350186

General Info

Members Datasets Scaffolds Average Seq Length
237 48 474 73

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0702530|Ga0316582_0702530_300_557
Length 85
Sequence LISFDPGKGDMIMREKVEEAIEKIRPMLQADGGDVELVDVKEGVVTVRLQGACAGCPMSQMTLKNGIEKILKKEIPEVVSVESAP

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
4 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
5 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
6 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
7 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
8 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
9 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
10 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
11 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
12 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
13 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
14 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
15 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
18 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
19 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
22 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
23 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
24 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
25 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
26 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
27 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
28 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
29 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
30 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
31 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
32 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
33 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
34 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
35 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
36 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
37 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
38 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
39 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
40 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
41 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
42 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
43 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
44 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
45 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
46 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
47 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
48 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.14
Metatranscriptomes 8.44
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 87.76
Stem 0
Stem Tuber 0
Unclassified 11.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0702530 3300036647 Bacteria 694
2 Ga0065704_10212855 3300005289 Bacteria 1102
3 Ga0265330_10266458 3300031235 Bacteria 722
4 Ga0265327_10412530 3300031251 Bacteria 586
5 Ga0265316_10101205 3300031344 Bacteria 2190
6 Ga0265316_10288447 3300031344 Unclassified 1198
7 Ga0316575_10000227 3300031665 Bacteria 15051
8 Ga0316575_10016845 3300031665 Bacteria 2769
9 Ga0316575_10061450 3300031665 Bacteria 1501
10 Ga0316575_10168768 3300031665 Bacteria 906
11 Ga0316575_10467031 3300031665 Bacteria 545
12 Ga0316575_10491768 3300031665 Unclassified 532
13 Ga0316579_10000809 3300031691 Bacteria 10800
14 Ga0316579_10003453 3300031691 Bacteria 6159
15 Ga0316579_10009559 3300031691 Bacteria 4081
16 Ga0316579_10014300 3300031691 Bacteria 3428
17 Ga0316579_10038909 3300031691 Bacteria 2201
18 Ga0316579_10053326 3300031691 Bacteria 1894
19 Ga0316579_10120863 3300031691 Bacteria 1258
20 Ga0316579_10149443 3300031691 Unclassified 1127
21 Ga0316579_10153989 3300031691 Unclassified 1110
22 Ga0316579_10423333 3300031691 Bacteria 644
23 Ga0316579_10447359 3300031691 Bacteria 625
24 Ga0316579_10449939 3300031691 Bacteria 623
25 Ga0316579_10609939 3300031691 Bacteria 528
26 Ga0265314_10426562 3300031711 Bacteria 711
27 Ga0316576_10002135 3300031727 Bacteria 11137
28 Ga0316576_10003303 3300031727 Bacteria 9415
29 Ga0316576_10008807 3300031727 Bacteria 6469
30 Ga0316576_10031736 3300031727 Bacteria 3750
31 Ga0316576_10036502 3300031727 Bacteria 3514
32 Ga0316576_10086355 3300031727 Bacteria 2333
33 Ga0316576_10092122 3300031727 Bacteria 2258
34 Ga0316576_10092780 3300031727 Bacteria 2250
35 Ga0316576_10094031 3300031727 Bacteria 2235
36 Ga0316576_10113984 3300031727 Bacteria 2028
37 Ga0316576_10154140 3300031727 Bacteria 1732
38 Ga0316576_10261506 3300031727 Bacteria 1298
39 Ga0316576_10400230 3300031727 Bacteria 1017
40 Ga0316576_10450287 3300031727 Bacteria 951
41 Ga0316576_10516521 3300031727 Bacteria 878
42 Ga0316576_10537870 3300031727 Unclassified 857
43 Ga0316576_10567018 3300031727 Bacteria 831
44 Ga0316576_10569754 3300031727 Bacteria 828
45 Ga0316576_10652528 3300031727 Unclassified 765
46 Ga0316576_11220426 3300031727 Bacteria 531
47 Ga0316578_10001732 3300031728 Bacteria 9119
48 Ga0316578_10004649 3300031728 Bacteria 6511
49 Ga0316578_10071383 3300031728 Bacteria 2056
50 Ga0316578_10071770 3300031728 Bacteria 2050
51 Ga0316578_10123170 3300031728 Bacteria 1559
52 Ga0316578_10126715 3300031728 Bacteria 1535
53 Ga0316578_10148349 3300031728 Bacteria 1413
54 Ga0316578_10148807 3300031728 Bacteria 1410
55 Ga0316578_10369437 3300031728 Bacteria 852
56 Ga0316578_10551591 3300031728 Unclassified 677
57 Ga0316578_10593660 3300031728 Unclassified 649
58 Ga0316577_10007407 3300031733 Bacteria 5855
59 Ga0316577_10013060 3300031733 Bacteria 4531
60 Ga0316577_10037184 3300031733 Bacteria 2723
61 Ga0316577_10045522 3300031733 Bacteria 2452
62 Ga0316577_10058307 3300031733 Bacteria 2155
63 Ga0316577_10061670 3300031733 Bacteria 2093
64 Ga0316577_10068168 3300031733 Bacteria 1986
65 Ga0316577_10088845 3300031733 Bacteria 1730
66 Ga0316577_10121309 3300031733 Bacteria 1469
67 Ga0316577_10201718 3300031733 Unclassified 1124
68 Ga0316577_10215970 3300031733 Bacteria 1084
69 Ga0316577_10277790 3300031733 Bacteria 948
70 Ga0316577_10334881 3300031733 Bacteria 858
71 Ga0316577_10341070 3300031733 Bacteria 850
72 Ga0316577_10448690 3300031733 Bacteria 733
73 Ga0316577_10643453 3300031733 Bacteria 603
74 Ga0316577_10874026 3300031733 Unclassified 510
75 Ga0316583_10000283 3300032133 Bacteria 14154
76 Ga0316583_10006779 3300032133 Bacteria 4126
77 Ga0316583_10031018 3300032133 Bacteria 1903
78 Ga0316583_10037277 3300032133 Bacteria 1723
79 Ga0316583_10040361 3300032133 Bacteria 1652
80 Ga0316583_10203936 3300032133 Bacteria 686
81 Ga0316583_10357067 3300032133 Bacteria 505
82 Ga0316585_10011867 3300032137 Bacteria 2573
83 Ga0316585_10020260 3300032137 Bacteria 2034
84 Ga0316585_10025805 3300032137 Bacteria 1824
85 Ga0316585_10325711 3300032137 Bacteria 511
86 Ga0316580_10000105 3300032139 Bacteria 15372
87 Ga0316580_10005206 3300032139 Bacteria 3786
88 Ga0316580_10008103 3300032139 Bacteria 3144
89 Ga0316580_10026764 3300032139 Bacteria 1783
90 Ga0316580_10026788 3300032139 Unclassified 1783
91 Ga0316580_10065657 3300032139 Bacteria 1113
92 Ga0316593_10042129 3300032168 Bacteria 1522
93 Ga0316593_10049581 3300032168 Bacteria 1415
94 Ga0316593_10062813 3300032168 Bacteria 1272
95 Ga0316593_10095259 3300032168 Unclassified 1051
96 Ga0316593_10165517 3300032168 Bacteria 809
97 Ga0316593_10165698 3300032168 Bacteria 809
98 Ga0316593_10396132 3300032168 Bacteria 533
99 Ga0316593_10443433 3300032168 Bacteria 506
100 Ga0316592_1014858 3300033524 Bacteria 1618
101 Ga0316592_1029928 3300033524 Bacteria 1182
102 Ga0316586_1008766 3300033527 Bacteria 1504
103 Ga0316588_1116529 3300033528 Bacteria 674
104 Ga0316588_1218520 3300033528 Unclassified 501
105 Ga0316587_1016396 3300033529 Bacteria 1236
106 Ga0316596_1014041 3300033541 Bacteria 1982
107 Ga0316596_1126800 3300033541 Bacteria 696
108 Ga0316596_1138498 3300033541 Bacteria 666
109 Ga0316596_1163316 3300033541 Bacteria 614
110 Ga0316596_1179968 3300033541 Bacteria 585
111 Ga0316596_1224084 3300033541 Unclassified 527
112 Ga0316574_0004375 3300035398 Bacteria 7388
113 Ga0316574_0005178 3300035398 Bacteria 6938
114 Ga0316574_0008386 3300035398 Bacteria 5738
115 Ga0316574_0020090 3300035398 Bacteria 3949
116 Ga0316574_0064111 3300035398 Bacteria 2311
117 Ga0316574_0131645 3300035398 Bacteria 1609
118 Ga0316574_0185922 3300035398 Bacteria 1336
119 Ga0316574_0243824 3300035398 Bacteria 1148
120 Ga0316574_0321523 3300035398 Bacteria 982
121 Ga0316574_0503753 3300035398 Bacteria 755
122 Ga0316574_0728684 3300035398 Bacteria 607
123 Ga0316582_0000418 3300036647 Bacteria 15553
124 Ga0316582_0008005 3300036647 Bacteria 5656
125 Ga0316582_0012255 3300036647 Bacteria 4776
126 Ga0316582_0024081 3300036647 Bacteria 3638
127 Ga0316582_0035229 3300036647 Bacteria 3088
128 Ga0316582_0080353 3300036647 Unclassified 2128
129 Ga0316582_0081011 3300036647 Bacteria 2120
130 Ga0316582_0103010 3300036647 Unclassified 1893
131 Ga0316582_0110988 3300036647 Unclassified 1825
132 Ga0316582_0135054 3300036647 Bacteria 1659
133 Ga0316582_0143798 3300036647 Bacteria 1609
134 Ga0316582_0255362 3300036647 Bacteria 1201
135 Ga0316582_0259115 3300036647 Bacteria 1192
136 Ga0316582_0338288 3300036647 Bacteria 1035
137 Ga0316582_0411285 3300036647 Bacteria 932
138 Ga0316582_0450974 3300036647 Bacteria 887
139 Ga0316582_0471552 3300036647 Bacteria 865
140 Ga0316582_0549944 3300036647 Bacteria 795
141 Ga0316582_0678395 3300036647 Unclassified 708
142 Ga0316582_0710785 3300036647 Bacteria 690
143 Ga0316582_0763367 3300036647 Unclassified 663
144 Ga0316582_0808487 3300036647 Unclassified 642
145 Ga0316582_0961838 3300036647 Unclassified 583
146 Ga0316582_0987807 3300036647 Unclassified 575
147 Ga0316582_1159716 3300036647 Bacteria 526
148 Ga0316582_1237324 3300036647 Bacteria 508
149 Ga0316584_0003747 3300036712 Bacteria 9958
150 Ga0316584_0006484 3300036712 Bacteria 7925
151 Ga0316584_0009589 3300036712 Bacteria 6727
152 Ga0316584_0013108 3300036712 Bacteria 5861
153 Ga0316584_0025170 3300036712 Bacteria 4362
154 Ga0316584_0034539 3300036712 Bacteria 3748
155 Ga0316584_0036501 3300036712 Bacteria 3648
156 Ga0316584_0043412 3300036712 Bacteria 3352
157 Ga0316584_0056698 3300036712 Bacteria 2932
158 Ga0316584_0063333 3300036712 Bacteria 2768
159 Ga0316584_0101776 3300036712 Bacteria 2151
160 Ga0316584_0105869 3300036712 Bacteria 2105
161 Ga0316584_0118589 3300036712 Bacteria 1978
162 Ga0316584_0366753 3300036712 Bacteria 1031
163 Ga0316584_0409166 3300036712 Bacteria 965
164 Ga0316584_0425298 3300036712 Bacteria 943
165 Ga0316584_0477687 3300036712 Bacteria 878
166 Ga0316584_0557387 3300036712 Bacteria 799
167 Ga0316584_0738692 3300036712 Bacteria 672
168 Ga0316584_1150512 3300036712 Bacteria 513
169 Ga0316581_0012672 3300037588 Bacteria 2377
170 Ga0316581_0018860 3300037588 Bacteria 2008
171 Ga0316581_0042761 3300037588 Bacteria 1382
172 Ga0316581_0057290 3300037588 Bacteria 1195
173 Ga0316581_0068211 3300037588 Unclassified 1092
174 Ga0400484_05887 3300038725 Bacteria 7645
175 Ga0400490_10531 3300038726 Bacteria 32214
176 Ga0400490_17984 3300038726 Bacteria 4313
177 Ga0400490_32086 3300038726 Bacteria 1001
178 Ga0400490_51844 3300038726 Bacteria 14520
179 Ga0400491_09716 3300038727 Bacteria 1019
180 Ga0400491_13126 3300038727 Bacteria 1078
181 Ga0400491_16662 3300038727 Bacteria 1254
182 Ga0400485_14641 3300038735 Bacteria 14006
183 Ga0400485_16561 3300038735 Bacteria 1927
184 Ga0400485_21688 3300038735 Bacteria 6854
185 Ga0400488_15992 3300038741 Bacteria 1880
186 Ga0400488_30738 3300038741 Bacteria 11478
187 Ga0400488_50819 3300038741 Bacteria 11063
188 Ga0400486_17636 3300038742 Bacteria 14413
189 Ga0400486_20934 3300038742 Bacteria 2297
190 Ga0400486_21293 3300038742 Bacteria 16460
191 Ga0400483_035049 3300039062 Bacteria 2939
192 Ga0400483_071935 3300039062 Bacteria 165886
193 Ga0400483_143920 3300039062 Unclassified 1423
194 Ga0400483_281303 3300039062 Bacteria 3300
195 Ga0400489_06520 3300039093 Bacteria 64056
196 Ga0400489_36940 3300039093 Bacteria 24345
197 Ga0400489_39658 3300039093 Bacteria 1034
198 Ga0400489_58669 3300039093 Bacteria 13957
199 Ga0400489_84424 3300039093 Bacteria 14051
200 Ga0400487_32881 3300039110 Bacteria 13687
201 Ga0400487_39758 3300039110 Bacteria 1115
202 Ga0400487_58619 3300039110 Bacteria 1131
203 Ga0451577_0000141 3300042876 Bacteria 161372
204 Ga0451577_0001745 3300042876 Bacteria 28026
205 Ga0451577_0157573 3300042876 Unclassified 2044
206 Ga0451577_1022606 3300042876 Bacteria 741
207 Ga0453683_0004620 3300044673 Bacteria 9725
208 Ga0453683_0156412 3300044673 Bacteria 1441
209 Ga0453684_0000463 3300044712 Bacteria 161665
210 Ga0453684_0000614 3300044712 Bacteria 130471
211 Ga0453684_0003717 3300044712 Bacteria 33777
212 Ga0453684_0068932 3300044712 Bacteria 4489
213 Ga0453684_0072461 3300044712 Bacteria 4349
214 Ga0453684_0075818 3300044712 Bacteria 4224
215 Ga0453684_0112359 3300044712 Bacteria 3307
216 Ga0453684_0249042 3300044712 Bacteria 2041
217 Ga0453684_0536817 3300044712 Bacteria 1290
218 Ga0453684_0643584 3300044712 Bacteria 1157
219 Ga0453684_2151659 3300044712 Unclassified 558
220 Ga0451576_0010120 3300045051 Bacteria 10860
221 Ga0451576_0116187 3300045051 Bacteria 2786
222 Ga0451576_0293877 3300045051 Bacteria 1699
223 Ga0451576_0772883 3300045051 Bacteria 1009
224 Ga0451576_1403783 3300045051 Bacteria 727
225 Ga0501036_1580147 3300049572 Bacteria 530
226 Ga0501041_0531730 3300049577 Bacteria 749
227 Ga0501047_0758806 3300049581 Bacteria 786
228 Ga0501048_0799204 3300049582 Bacteria 678
229 Ga0501068_0350244 3300049584 Bacteria 949
230 Ga0501076_1455571 3300049592 Bacteria 563
231 Ga0501079_1024336 3300049741 Bacteria 650
232 Ga0501080_0285782 3300049742 Bacteria 1498
233 Ga0501081_1100657 3300049743 Bacteria 601
234 Ga0501081_1309695 3300049743 Unclassified 549
235 Ga0501044_0177077 3300049823 Bacteria 2101
236 Ga0501082_1755569 3300060353 Bacteria 541
237 2524003509 2523533628 Bacteria 4098242
238 Ga0316582_0702530
239 Ga0065704_10212855
240 Ga0265330_10266458
241 Ga0265327_10412530
242 Ga0265316_10101205
243 Ga0265316_10288447
244 Ga0316575_10000227
245 Ga0316575_10016845
246 Ga0316575_10061450
247 Ga0316575_10168768
248 Ga0316575_10467031
249 Ga0316575_10491768
250 Ga0316579_10000809
251 Ga0316579_10003453
252 Ga0316579_10009559
253 Ga0316579_10014300
254 Ga0316579_10038909
255 Ga0316579_10053326
256 Ga0316579_10120863
257 Ga0316579_10149443
258 Ga0316579_10153989
259 Ga0316579_10423333
260 Ga0316579_10447359
261 Ga0316579_10449939
262 Ga0316579_10609939
263 Ga0265314_10426562
264 Ga0316576_10002135
265 Ga0316576_10003303
266 Ga0316576_10008807
267 Ga0316576_10031736
268 Ga0316576_10036502
269 Ga0316576_10086355
270 Ga0316576_10092122
271 Ga0316576_10092780
272 Ga0316576_10094031
273 Ga0316576_10113984
274 Ga0316576_10154140
275 Ga0316576_10261506
276 Ga0316576_10400230
277 Ga0316576_10450287
278 Ga0316576_10516521
279 Ga0316576_10537870
280 Ga0316576_10567018
281 Ga0316576_10569754
282 Ga0316576_10652528
283 Ga0316576_11220426
284 Ga0316578_10001732
285 Ga0316578_10004649
286 Ga0316578_10071383
287 Ga0316578_10071770
288 Ga0316578_10123170
289 Ga0316578_10126715
290 Ga0316578_10148349
291 Ga0316578_10148807
292 Ga0316578_10369437
293 Ga0316578_10551591
294 Ga0316578_10593660
295 Ga0316577_10007407
296 Ga0316577_10013060
297 Ga0316577_10037184
298 Ga0316577_10045522
299 Ga0316577_10058307
300 Ga0316577_10061670
301 Ga0316577_10068168
302 Ga0316577_10088845
303 Ga0316577_10121309
304 Ga0316577_10201718
305 Ga0316577_10215970
306 Ga0316577_10277790
307 Ga0316577_10334881
308 Ga0316577_10341070
309 Ga0316577_10448690
310 Ga0316577_10643453
311 Ga0316577_10874026
312 Ga0316583_10000283
313 Ga0316583_10006779
314 Ga0316583_10031018
315 Ga0316583_10037277
316 Ga0316583_10040361
317 Ga0316583_10203936
318 Ga0316583_10357067
319 Ga0316585_10011867
320 Ga0316585_10020260
321 Ga0316585_10025805
322 Ga0316585_10325711
323 Ga0316580_10000105
324 Ga0316580_10005206
325 Ga0316580_10008103
326 Ga0316580_10026764
327 Ga0316580_10026788
328 Ga0316580_10065657
329 Ga0316593_10042129
330 Ga0316593_10049581
331 Ga0316593_10062813
332 Ga0316593_10095259
333 Ga0316593_10165517
334 Ga0316593_10165698
335 Ga0316593_10396132
336 Ga0316593_10443433
337 Ga0316592_1014858
338 Ga0316592_1029928
339 Ga0316586_1008766
340 Ga0316588_1116529
341 Ga0316588_1218520
342 Ga0316587_1016396
343 Ga0316596_1014041
344 Ga0316596_1126800
345 Ga0316596_1138498
346 Ga0316596_1163316
347 Ga0316596_1179968
348 Ga0316596_1224084
349 Ga0316574_0004375
350 Ga0316574_0005178
351 Ga0316574_0008386
352 Ga0316574_0020090
353 Ga0316574_0064111
354 Ga0316574_0131645
355 Ga0316574_0185922
356 Ga0316574_0243824
357 Ga0316574_0321523
358 Ga0316574_0503753
359 Ga0316574_0728684
360 Ga0316582_0000418
361 Ga0316582_0008005
362 Ga0316582_0012255
363 Ga0316582_0024081
364 Ga0316582_0035229
365 Ga0316582_0080353
366 Ga0316582_0081011
367 Ga0316582_0103010
368 Ga0316582_0110988
369 Ga0316582_0135054
370 Ga0316582_0143798
371 Ga0316582_0255362
372 Ga0316582_0259115
373 Ga0316582_0338288
374 Ga0316582_0411285
375 Ga0316582_0450974
376 Ga0316582_0471552
377 Ga0316582_0549944
378 Ga0316582_0678395
379 Ga0316582_0710785
380 Ga0316582_0763367
381 Ga0316582_0808487
382 Ga0316582_0961838
383 Ga0316582_0987807
384 Ga0316582_1159716
385 Ga0316582_1237324
386 Ga0316584_0003747
387 Ga0316584_0006484
388 Ga0316584_0009589
389 Ga0316584_0013108
390 Ga0316584_0025170
391 Ga0316584_0034539
392 Ga0316584_0036501
393 Ga0316584_0043412
394 Ga0316584_0056698
395 Ga0316584_0063333
396 Ga0316584_0101776
397 Ga0316584_0105869
398 Ga0316584_0118589
399 Ga0316584_0366753
400 Ga0316584_0409166
401 Ga0316584_0425298
402 Ga0316584_0477687
403 Ga0316584_0557387
404 Ga0316584_0738692
405 Ga0316584_1150512
406 Ga0316581_0012672
407 Ga0316581_0018860
408 Ga0316581_0042761
409 Ga0316581_0057290
410 Ga0316581_0068211
411 Ga0400484_05887
412 Ga0400490_10531
413 Ga0400490_17984
414 Ga0400490_32086
415 Ga0400490_51844
416 Ga0400491_09716
417 Ga0400491_13126
418 Ga0400491_16662
419 Ga0400485_14641
420 Ga0400485_16561
421 Ga0400485_21688
422 Ga0400488_15992
423 Ga0400488_30738
424 Ga0400488_50819
425 Ga0400486_17636
426 Ga0400486_20934
427 Ga0400486_21293
428 Ga0400483_035049
429 Ga0400483_071935
430 Ga0400483_143920
431 Ga0400483_281303
432 Ga0400489_06520
433 Ga0400489_36940
434 Ga0400489_39658
435 Ga0400489_58669
436 Ga0400489_84424
437 Ga0400487_32881
438 Ga0400487_39758
439 Ga0400487_58619
440 Ga0451577_0000141
441 Ga0451577_0001745
442 Ga0451577_0157573
443 Ga0451577_1022606
444 Ga0453683_0004620
445 Ga0453683_0156412
446 Ga0453684_0000463
447 Ga0453684_0000614
448 Ga0453684_0003717
449 Ga0453684_0068932
450 Ga0453684_0072461
451 Ga0453684_0075818
452 Ga0453684_0112359
453 Ga0453684_0249042
454 Ga0453684_0536817
455 Ga0453684_0643584
456 Ga0453684_2151659
457 Ga0451576_0010120
458 Ga0451576_0116187
459 Ga0451576_0293877
460 Ga0451576_0772883
461 Ga0451576_1403783
462 Ga0501036_1580147
463 Ga0501041_0531730
464 Ga0501047_0758806
465 Ga0501048_0799204
466 Ga0501068_0350244
467 Ga0501076_1455571
468 Ga0501079_1024336
469 Ga0501080_0285782
470 Ga0501081_1100657
471 Ga0501081_1309695
472 Ga0501044_0177077
473 Ga0501082_1755569
474 2524003509

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01106

NifU

NifU-like domain

17

82

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z51-assembly1.cif.gz_A-2 crystal structure of arabidopsis cnfu involved in iron-sulfur cluster biosynthesis 0.9121 3 73
2z51-assembly1.cif.gz_A-2 crystal structure of arabidopsis cnfu involved in iron-sulfur cluster biosynthesis 0.8661 3 73
2m5o-assembly1.cif.gz_A solution nmr structure ctd domain of nfu1 iron-sulfur cluster scaffold homolog from homo sapiens, northeast structural genomics consortium (nesg) target hr2876c 0.8576 5 73
2jnv-assembly1.cif.gz_A solution structure of c-terminal domain of nifu-like protein from oryza sativa 0.8175 5 73
2m5o-assembly1.cif.gz_A solution nmr structure ctd domain of nfu1 iron-sulfur cluster scaffold homolog from homo sapiens, northeast structural genomics consortium (nesg) target hr2876c 0.8055 5 73
ID Description Score Start End Superfamily
2z51A01 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9121 3 73 3.30.300.130
af_Q2FZW2_1_80_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9106 2 73 3.30.300.130
af_C0H578_105_189_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9103 2 73 3.30.300.130
af_P63020_101_188_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9081 1 72 3.30.300.130
af_P32860_146_234_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.9061 3 73 3.30.300.130
ID Description Score Start End GO Terms
AF-R5FPB9-F1-model_v4 deleted 0.9574 3 73
AF-A0A3P2AM21-F1-model_v4 NifU family protein 0.9555 3 73 GO:0005506
GO:0016226
GO:0051536
AF-A0A7V0VFJ6-F1-model_v4 NifU family protein 0.9552 2 73 GO:0005506
GO:0016226
GO:0051536
AF-A0A0U5B5A7-F1-model_v4 Fe/S biogenesis protein NfuA 0.9548 3 73 GO:0005506
GO:0016226
GO:0051536
AF-A0A0Q9XV35-F1-model_v4 Nitrogen fixation protein NifU 0.9531 1 73 GO:0005506
GO:0016226
GO:0051536

Map